Pregenerated sensors for ZADH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049090Ensembl transcript IDs: ENSMUST00000060223.4, ENSMUST00000235383.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGAAGAGCCTTTCTTGTCCCCTGCTCCGGCAACCCTCTGCTATaGCGAGGACACAAAGAGCCCTGCTCAGGCTTGCTACCCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: TGRAFLVPCSGNPLL*RGHKEPCSGLLPFF Trigger: GAAGAAGGGTAGCAAGCCTGAGCAGGGCTCTTTGTGTCCTCGTCATAGCAGAGGGTTGCCGGAGCAGGGGACAAGAAAGGCTCTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR TCA 90 bp | CGCTTCTCTCAAAGGCCAAGAAGCAAAATGGCAACCCAGGACACCTaGCTCTCATCCCGTGCCTGCACCAGAGACCAAGCACACTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: RFSQRPRSKMATQDT*LSSRACTRDQAHFP Trigger: TGGAAAGTGTGCTTGGTCTCTGGTGCAGGCACGGGATGAGAGTCAGGTGTCCTGGGTTGCCATTTTGCTTCTTGGCCTTTGAGAGAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR GCA 90 bp | TGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTCAGTaGTTGACACGAGAACGACTGCTTTCAATGCAAAGGAGACTCGGT | + |
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Preference number: 1 (lower is better) Translates to: CENPRWTDTAFSTVQ*LTRERLLSMQRRLG Trigger: ACCGAGTCTCCTTTGCATTGAAAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR CCA 90 bp | TTTAGATGGCCAGGGTGCCTACTGTGTTTGGAGCTATGTGAGATTTaGTCCTTGGCAACAGAAAGTCTCCTTTTAACCCTTCCCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: FRWPGCLLCLELCEI*SLATESLLLTLPRP Trigger: TGGCCTGGGAAGGGTTAAAAGGAGACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 90 bp | AAGCAAATGGATGTGGTTTTAGATGGCCAGGGTGCCTACTGTGTTTaGAGCTATGTGAGATTTGGTCCTTGGCAACAGAAAGTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: KQMDVVLDGQGAYCV*SYVRFGPWQQKVSF Trigger: AAAGGAGACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATCCATTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR TCA 90 bp | CAGATAAAATGTTGGTCTTTCATCTTTATTACCCTCCCATTAAAATaGAGGAAACCGGGACTCACTTCAGTTCAGAAGAGGCAATTTAGC | + |
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Preference number: 1 (lower is better) Translates to: QIKCWSFIFITLPLK*RKPGLTSVQKRQFS Trigger: GCTAAATTGCCTCTTCTGAACTGAAGTGAGTCCCGGTTTCCTTCATTTTAATGGGAGGGTAATAAAGATGAAAGACCAACATTTTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGGCAGCCTTGGGAAACCTAAGGTGAAGGGCAAGCAGACCAACTATGGCCTTCCCAGGCCAGAGTaGGTCCCCTTTTGTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: VVGSLGKPKVKGKQTNYGLPRPE*VPFCDS Trigger: GGAATCACAAAAGGGGACTCACTCTGGCCTGGGAAG...GCCATAGTTGGTCTGCTTGCCCTTCACCTTAGGTTTCCCAAGGCTGCCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTAACGACTGCTTTCAATaGAAAGGAGACTCGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GKRLLRHTACENPRWTDTNDCFQ*KGDSVS Trigger: GCTCACCGAGTCTCCTTTGCATTGAAAGCAGTCGTT...AGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACAAGAGAGAACTCTGATTaGGGCACATTATTTTTACCC | + |
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Preference number: 2 (lower is better) Translates to: GGKGSSGTLPVRIQGGPTRENSD*GTLFLP Trigger: GGGTAAAAATAATGTGCCTCAATCAGAGTTCTCTCT...TGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTTTCATTTCTCTCCTTTaGTTTCTGTCACTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GKRLLRHTACENPRWTDTFISLL*FLSLSC Trigger: ACAGGACAGTGACAGAAACCAAAGGAGAGAAATGAA...AGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGCTCGCTTCTCTCAAAGGCCAAGAAGCAAAATGGCAACCCAGGACACCGACACCTCTGTTTGCTaGATCACTTTCCCAATAACT | + |
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Preference number: 2 (lower is better) Translates to: QVARFSQRPRSKMATQDTDTSVC*ITFPIT Trigger: AGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTC...GGTGTCCTGGGTTGCCATTTTGCTTCTTGGCCTTTGAGAGAAGCGAGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR GCA 90 bp | GACACAACACTAGAGCAGGTGGCTCGCTTCTCTCAAAGGCCAAGAAGCAAAATGTTTAGATGGCCAGGGTaGCTACTGTGTTTGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: DTTLEQVARFSQRPRSKMFRWPG*LLCLEL Trigger: TAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAA...CATTTTGCTTCTTGGCCTTTGAGAGAAGCGAGCCACCTGCTCTAGTGTTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CAA 90 bp | GAAGCAAATGGATGTGGTTTTAGATGGCCAGGGTGCCTACTGTGTTaGGAGCTATGTGAGATTTGGTCCTTGGCAACAGAAAGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EANGCGFRWPGCLLC*ELCEIWSLATESLL Trigger: AAGGAGACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATCCATTTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTTGGAACAATAAAATCTaGAATGAGACCGTCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: RHTACENPRWTDTAFSTVWNNKI*NETVHD Trigger: GTCATGGACGGTCTCATTCCAGATTTTATTGTTCCA...AACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | GACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTTCAAAATCTCATCAAGCTaGGGACATACTGACTCGATC | + |
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Preference number: 2 (lower is better) Translates to: DRHCFLNCSVLDTRTTAFKISSS*GHTDSI Trigger: GATCGAGTCAGTATGTCCCCAGCTTGATGAGATTTT...GAAAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | GACACAACACTAGAGCAGGTGGCTCGCTTCTCTCAAAGGCCAAGAAGCAAAATGGAGCTATGTGAGATTTaGTCCTTGGCAACAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: DTTLEQVARFSQRPRSKMELCEI*SLATES Trigger: ACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTC...CATTTTGCTTCTTGGCCTTTGAGAGAAGCGAGCCACCTGCTCTAGTGTTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR CCA 90 bp | TGGACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTTTCATTTCTCTCCTTTaGTTTCTGTCACTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: WTDTAFSTVQCLTRERLLFISLL*FLSLSC Trigger: ACAGGACAGTGACAGAAACCAAAGGAGAGAAATGAA...AAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | GGAATGAGACCGTCCATGACTAAAGACTCAAATGTAAACGTTTTACCTCTTAGCGTTCGTTTTAAGGCATaGAGAATTCATTTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GMRPSMTKDSNVNVLPLSVRFKA*RIHFSP Trigger: AGGAGAGAAATGAATTCTCCATGCCTTAAAACGAAC...GCTAAGAGGTAAAACGTTTACATTTGAGTCTTTAGTCATGGACGGTCTCATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACCTCTGTTTGCTGGATCACTTTCCCAATAACTTAACAAGATTAAATTTGAAAATCTCATCAAGCTaGGGACATACTGACTCGATC | + |
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Preference number: 2 (lower is better) Translates to: RHLCLLDHFPNNLTRLNLKISSS*GHTDSI Trigger: GATCGAGTCAGTATGTCCCCAGCTTGATGAGATTTT...CAAATTTAATCTTGTTAAGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGAAGAGAGAACTCTGATTaGGGCACATTATTTTTACCC | + |
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Preference number: 2 (lower is better) Translates to: LTHQELIYFPGTIKSGMRRENSD*GTLFLP Trigger: GGGTAAAAATAATGTGCCTCAATCAGAGTTCTCTCT...TCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACCTCTGTTTGCTGGATCACTTTCCCAATAACTTAACAAGATTAAATTTGGTTCGTTTTAAGGCATaGAGAATTCATTTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RHLCLLDHFPNNLTRLNLVRFKA*RIHFSP Trigger: AGGAGAGAAATGAATTCTCCATGCCTTAAAACGAAC...CAAATTTAATCTTGTTAAGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR TCA 72 bp | GCCTTTCTTGTCCCCTGCTCCGGCAACCCTCTGCTATaGCGAGGACACAAAGAGCCCTGCTCAGGCTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: AFLVPCSGNPLL*RGHKEPCSGLL Trigger: TAGCAAGCCTGAGCAGGGCTCTTTGTGTCCTCGTCATAGCAGAGGGTTGCCGGAGCAGGGGACAAGAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR TCA 72 bp | CAAAGGCCAAGAAGCAAAATGGCAACCCAGGACACCTaGCTCTCATCCCGTGCCTGCACCAGAGACCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: QRPRSKMATQDT*LSSRACTRDQA Trigger: TGCTTGGTCTCTGGTGCAGGCACGGGATGAGAGTCAGGTGTCCTGGGTTGCCATTTTGCTTCTTGGCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 72 bp | AGGTGGCTCGCTTCTCTCAAAGGCCAAGAAGCAAAATaGCAACCCAGGACACCTGACTCTCATCCCGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RWLASLKGQEAK*QPRTPDSHPVP Trigger: AGGCACGGGATGAGAGTCAGGTGTCCTGGGTTGCCATTTTGCTTCTTGGCCTTTGAGAGAAGCGAGCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 72 bp | AGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTaGACCGACACTGCTTTCTCAACTGTTCAGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: RLLRHTACENPR*TDTAFSTVQCL Trigger: CAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR TCA 72 bp | CTACAAAAGTGGTGGGCAGCCTTGGGAAACCTAAGGTaGAGGGCAAGCAGACCAACTATGGCGAGGTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: LQKWWAALGNLR*RASRPTMARCE Trigger: TTCACACCTCGCCATAGTTGGTCTGCTTGCCCTTCACCTTAGGTTTCCCAAGGCTGCCCACCACTTTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAATTCATTTCTCTCCTTaGGTTTCTGTCACTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLRHTACENPRWTDTAFSIHFSP*VSVTVL Trigger: CAGGACAGTGACAGAAACCAAAGGAGAGAAATGAAT...TGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR GCA 72 bp | GGAGAAGCAAATGGATGTGGTTTTAGATGGCCAGGGTaGCTACTGTGTTTGGAGCTATGTGAGATTTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GEANGCGFRWPG*LLCLELCEIWS Trigger: GGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATCCATTTGCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 72 bp | AGCCTCTTAGGAGAAGCAAATGGATGTGGTTTTAGATaGCCAGGGTGCCTACTGTGTTTGGAGCTATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLLGEANGCGFR*PGCLLCLELCE Trigger: CTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATCCATTTGCTTCTCCTAAGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 72 bp | CCAGGGTGCCTACTGTGTTTGGAGCTATGTGAGATTTaGTCCTTGGCAACAGAAAGTCTCCTTTTAACCCTT | + |
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Preference number: 3 (lower is better) Translates to: PGCLLCLELCEI*SLATESLLLTL Trigger: AAGGGTTAAAAGGAGACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR CCA 72 bp | GATGTGGTTTTAGATGGCCAGGGTGCCTACTGTGTTTaGAGCTATGTGAGATTTGGTCCTTGGCAACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: DVVLDGQGAYCV*SYVRFGPWQQK Trigger: TTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| 3UTR-3UTR CAA 90 bp | GAATTCTCTCCCAAATGTCTATTTAGATGGGAGGTTAGTGATTTTAGGGGGAAAATTCATTTCTCTCCTTaGGTTTCTGTCACTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EFSPKCLFRWEVSDFRGKIHFSP*VSVTVL Trigger: CAGGACAGTGACAGAAACCAAAGGAGAGAAATGAAT...TTTCCCCCTAAAATCACTAACCTCCCATCTAAATAGACATTTGGGAGAGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| 3UTR CCA 72 bp | ATCAGGTCTCACACATCAGGAATTAATTTACTTCCCTaGAACAATAAAATCTGGAATGAGACCGTCCATGAC | + |
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Preference number: 3 (lower is better) Translates to: IRSHTSGINLLP*NNKIWNETVHD Trigger: GTCATGGACGGTCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAGACCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACAACGACATGTCCACGATaGCTCGGGCCCCGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGKGSSGTLPVRIQGGPTTTCPR*LGPRRP Trigger: CGGCCGCCGGGGCCCGAGCCATCGTGGACATGTCGT...TGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACCACCAGCTTCTGCATaGTTCGGGGGATGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGKGSSGTLPVRIQGGPTPPASA*FGGWRS Trigger: GCTCCGCCATCCCCCGAACCATGCAGAAGCTGGTGG...TGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS-3UTR CCA 90 bp | GGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCATGGTTCGGGGGATaGCGGAGCCCTGGAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GKRLLRHTACENPRWTDTAWFGG*RSPGSP Trigger: TGGACTTCCAGGGCTCCGCCATCCCCCGAACCATGC...AGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS-3UTR CCA 90 bp | AGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTAGGGTGACGGCCTCGTaGAAGTTAGGGCTCAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RHTACENPRWTDTAFSTVRVTAS*KLGLSR Trigger: CCGGCTGAGCCCTAACTTCCACGAGGCCGTCACCCT...AACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCATCAAGCGCCCTTTGGTaGCCAAGGCATCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLRHTACENPRWTDTAFSSSALW*PRHPQP Trigger: TGGCTGTGGATGCCTTGGCCACCAAAGGGCGCTTGA...TGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR TCA 90 bp | TTAGGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGGCTCTGTTCTGTAGTTaGTGGGCCGATCACACCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGGKGSSGTLPVRIQGGPALFCS*WADHTQ Trigger: TTGGGTGTGATCGGCCCATCAACTACAGAACAGAGC...CGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACAGCTATCTTGGAAAGCTaGACAGCAAACTGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GGKGSSGTLPVRIQGGPTAILES*TANWPV Trigger: CACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGC...TGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR CCA 90 bp | TTAGGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGCCAGCAAACGTTCCATaGCAGCCTGGTACTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGGKGSSGTLPVRIQGGPPANVP*QPGTWR Trigger: TCTCCAAGTACCAGGCTGCCATGGAACGTTTGCTGG...CGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR TCA 90 bp | GACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTTCCGGACTCCAGGCCAATaGACCTTCCATCCGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DRHCFLNCSVLDTRTTAFRTPGQ*TFHPEP Trigger: TGGCTCCGGATGGAAGGTTCATTGGCCTGGAGTCCG...GAAAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR GCA 90 bp | GGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTATCTTGGAAAGCTaGACAGCAAACTGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GKRLLRHTACENPRWTDTAILES*TANWPV Trigger: CACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGC...AGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTGGCAACAGAAAGTCTCCTTTTAACCCTTCCCAGGCCAGAGTGAGTCCCCAGCCAGGTCAAACATaGCTCCCCCAACAGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: VLGNRKSPFNPSQARVSPQPGQT*LPQQTH Trigger: ATGAGTCTGTTGGGGGAGCCATGTTTGACCTGGCTG...GGGACTCACTCTGGCCTGGGAAGGGTTAAAAGGAGACTTTCTGTTGCCAAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS-3UTR CCA 90 bp | ACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTCAGTGCCTATCAAGCGCCCTTTaGTGGCCAAGGCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TACENPRWTDTAFSTVQCLSSAL*WPRHPQ Trigger: CTGTGGATGCCTTGGCCACCAAAGGGCGCTTGATAG...GCACTGAACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR CCA 90 bp | AGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTCTATCAAGCGCCCTTTaGTGGCCAAGGCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RHTACENPRWTDTAFSTVLSSAL*WPRHPQ Trigger: CTGTGGATGCCTTGGCCACCAAAGGGCGCTTGATAG...AACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS-3UTR GCA 90 bp | ACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAACTGTTCAGTGCCCTTCAGGGTACTCCTaGTTCAGAACCGTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TACENPRWTDTAFSTVQCPSGYS*FRTVST Trigger: TGTGGAGACGGTTCTGAAGCAGGAGTACCCTGAAGG...GCACTGAACAGTTGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGACACTGCTTTCTCAGGCACTTGGCTATCTTaGAAAGCTGCACAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHTACENPRWTDTAFSGTWLS*KAAQQT Trigger: AGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCC...TGAGAAAGCAGTGTCGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR TCA 90 bp | TGGACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTGCTCTGTTCTGTAGTTaGTGGGCCGATCACACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WTDTAFSTVQCLTRERLLALFCS*WADHTQ Trigger: TTGGGTGTGATCGGCCCATCAACTACAGAACAGAGC...AAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR TCA 90 bp | TGGACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTTCAGAAAGAAACCCCTaGGGCTGGCCGACTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTDTAFSTVQCLTRERLLSERNP*GWPTSS Trigger: TGAAGAAGTCGGCCAGCCTCAGGGGTTTCTTTCTGA...AAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR TCA 90 bp | GACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTTCAACTTTCTTCCCTTCTaGCAGTTCCCCAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRHCFLNCSVLDTRTTAFNFLPF*QFPKLF Trigger: GAAGAGCTTGGGGAACTGTCAGAAGGGAAGAAAGTT...GAAAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| 3UTR CAA 72 bp | AGGTGGACCGACACTGCTTTCTCAACTGTTCAGTGCTaGACACGAGAACGACTGCTTTCAATGCAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWTDTAFSTVQC*TRERLLSMQRR Trigger: TCTCCTTTGCATTGAAAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| 3UTR CAA 72 bp | GGATGTGGTTTTAGATGGCCAGGGTGCCTACTGTGTTaGGAGCTATGTGAGATTTGGTCCTTGGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCGFRWPGCLLC*ELCEIWSLATE Trigger: TTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCACCCTGGCCATCTAAAACCACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS-3UTR TCA 90 bp | GAATTCTCTCCCAAATGTCTATTTAGATGGGAGGTTAGTGATTTTAGGGGGAAACGGACTCCAGGCCAATaGACCTTCCATCCGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFSPKCLFRWEVSDFRGKRTPGQ*TFHPEP Trigger: TGGCTCCGGATGGAAGGTTCATTGGCCTGGAGTCCG...TTTCCCCCTAAAATCACTAACCTCCCATCTAAATAGACATTTGGGAGAGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR TCA 90 bp | GACTCGATCAGGTCTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAATGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSIRSHTSGINLLPWNNKWKSRK*RAYDMS Trigger: GGACATGTCGTACGCCCGTCACTTCCTGGACTTCCA...TTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAGACCTGATCGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| 3UTR CAA 72 bp | TGCCTACTGTGTTTGGAGCTATGTGAGATTTGGTCCTaGGCAACAGAAAGTCTCCTTTTAACCCTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLCLELCEIWS*ATESLLLTLPR Trigger: CCTGGGAAGGGTTAAAAGGAGACTTTCTGTTGCCAAGGACCAAATCTCACATAGCTCCAAACACAGTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS-3UTR TCA 90 bp | GGAATGAGACCGTCCATGACTAAAGACTCAAATGTAAACGTTTTACCTCTTAGCTCAGAAAGAAACCCCTaGGGCTGGCCGACTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMRPSMTKDSNVNVLPLSSERNP*GWPTSS Trigger: TGAAGAAGTCGGCCAGCCTCAGGGGTTTCTTTCTGA...GCTAAGAGGTAAAACGTTTACATTTGAGTCTTTAGTCATGGACGGTCTCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGTCACCACCAGCTTCTaGATGGTTCGGGGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHTSGINLLPWNNKIWNVTTSF*MVRGMA Trigger: CGCCATCCCCCGAACCATGCAGAAGCTGGTGGTGAC...ATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATTCAAGCGCCCTTTGGTaGCCAAGGCATCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHTSGINLLPWNNKIWNSSALW*PRHPQP Trigger: TGGCTGTGGATGCCTTGGCCACCAAAGGGCGCTTGA...ATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCTCTCCCAAATGTCTATTTAGATGGGAGGTTAGTGATTTTAGGGGGAAACCAGCAAACGTTCCATaGCAGCCTGGTACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSPKCLFRWEVSDFRGKPANVP*QPGTWR Trigger: TCTCCAAGTACCAGGCTGCCATGGAACGTTTGCTGG...TTTCCCCCTAAAATCACTAACCTCCCATCTAAATAGACATTTGGGAGAGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CCA 90 bp | GAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGACCGTCCATGACTCAGCCAGGTCAAACATaGCTCCCCCAACAGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELIYFPGTIKSGMRPSMTQPGQT*LPQQTH Trigger: ATGAGTCTGTTGGGGGAGCCATGTTTGACCTGGCTG...AGTCATGGACGGTCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR GCA 90 bp | CTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGATTCCAGGCTGAGGTATaGAGTGGTGCCACTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTHQELIYFPGTIKSGMRFQAEV*SGATNQ Trigger: CTGGTTAGTGGCACCACTGCATACCTCAGCCTGGAA...TCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATCACTTTCCCAATAACTTAACAAGATTAAATTTGGAGAATTCTCTCCCATTCCAGGCTGAGGTATaGAGTGGTGCCACTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDHFPNNLTRLNLENSLPFQAEV*SGATNQ Trigger: CTGGTTAGTGGCACCACTGCATACCTCAGCCTGGAA...TGGGAGAGAATTCTCCAAATTTAATCTTGTTAAGTTATTGGGAAAGTGATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR GCA 90 bp | CTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGACCTTCAGGGTACTCCTaGTTCAGAACCGTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTHQELIYFPGTIKSGMRPSGYS*FRTVST Trigger: TGTGGAGACGGTTCTGAAGCAGGAGTACCCTGAAGG...TCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTCTGTTTGCTGGATCACTTTCCCAATAACTTAACAAGATTAAATTTGAACTTTCTTCCCTTCTaGCAGTTCCCCAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLCLLDHFPNNLTRLNLNFLPF*QFPKLF Trigger: GAAGAGCTTGGGGAACTGTCAGAAGGGAAGAAAGTT...CAAATTTAATCTTGTTAAGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| 3UTR CAA 72 bp | CAGCACACAGTATACACGTCCTTAAGACACCTCTGTTaGCTGGATCACTTTCCCAATAACTTAACAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: QHTVYTSLRHLC*LDHFPNNLTRL Trigger: TAATCTTGTTAAGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTCTTAAGGACGTGTATACTGTGTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 90 bp | CCGGGGAGCGGCACTGGGCAGTCCCGGCGCAGGGTGACGGCCTCGTaGAAGTTAGGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSGTGQSRRRVTAS*KLGLSRVTTSFCMV Trigger: AACCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCTAACTTCCACGAGGCCGTCACCCTGCGCCGGGACTGCCCAGTGCCGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS TCA 90 bp | TTCTGCATGGTTCGGGGGATGGCGGAGCCCTGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCCACGATGGCTCGGGCCCCGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FCMVRGMAEPWKSRK*RAYDMSTMARAPAA Trigger: GGCCGCCGGGGCCCGAGCCATCGTGGACATGTCGTACGCCCGTCACTTCCTGGACTTCCAGGGCTCCGCCATCCCCCGAACCATGCAGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS TCA 90 bp | GCCTGTGCCCCCAGCGGCTGCTGTGACCAGAACTTTCTTCCCTTCTaGCAGTTCCCCAAGCTCTTCCAGGCTGAGGTATGCAGTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACAPSGCCDQNFLPF*QFPKLFQAEVCSGA Trigger: GGCACCACTGCATACCTCAGCCTGGAAGAGCTTGGGGAACTGTCAGAAGGGAAGAAAGTTCTGGTCACAGCAGCCGCTGGGGGCACAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS GCA 90 bp | GAGGAGCAGGTTCCGATAACGTGGCACTTGGCTATCTTGGAAAGCTaGACAGCAAACTGGCCTGTGCCCCCAGCGGCTGCTGTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EEQVPITWHLAILES*TANWPVPPAAAVTR Trigger: TCTGGTCACAGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCACGTTATCGGAACCTGCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS TCA 90 bp | TGGAAAGCTGCACAGCAAACTGGCCTGTGCCCCCAGCGGCTGCTGTaGCCAGAACTTTCTTCCCTTCTGACAGTTCCCCAAGCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WKAAQQTGLCPQRLL*PELSSLLTVPQALP Trigger: TGGAAGAGCTTGGGGAACTGTCAGAAGGGAAGAAAGTTCTGGTCACAGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGCAGCTTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 90 bp | CCGATAACGTGGCACTTGGCTATCTTGGAAAGCTGCACAGCAAACTaGCCTGTGCCCCCAGCGGCTGCTGTGACCAGAACTTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PITWHLAILESCTAN*PVPPAAAVTRTFFP Trigger: AGGGAAGAAAGTTCTGGTCACAGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCACGTTATCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 90 bp | TCAAGCGCCCTTTGGTGGCCAAGGCATCCACAGCCAGGTCAAACATaGCTCCCCCAACAGACTCATAGACTACGTCAACGCCTTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSALWWPRHPQPGQT*LPQQTHRLRQRLQG Trigger: ACCCTGAAGGCGTTGACGTAGTCTATGAGTCTGTTGGGGGAGCCATGTTTGACCTGGCTGTGGATGCCTTGGCCACCAAAGGGCGCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAAACAGCAGGCAGGCAGGAGGATAGACACGTGTGCACCAGGACACAACACTATCAAGCGCCCTTaGGTGGCCAAGGCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EEKQQAGRRIDTCAPGHNTIKRP*VAKAST Trigger: TGTGGATGCCTTGGCCACCAAAGGGCGCTTGATAGT...GTTGTGTCCTGGTGCACACGTGTCTATCCTCCTGCCTGCCTGCTGTTTCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS-3UTR CAA 90 bp | TTAGGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGGACTTCTTCAGGAGCTaGGTTGGCAAAACTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGKGSSGTLPVRIQGGPDFFRS*VGKTPA Trigger: AGCGGGAGTTTTGCCAACCAAGCTCCTGAAGAAGTC...CGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGGGGAAAAGGCTCCTCAGGCACACTGCCTGTGAGAATCCAAGGTGGACCGTGGCACTTGGCTATCTaGGAAAGCTGCACAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGKGSSGTLPVRIQGGPWHLAI*ESCTAN Trigger: GTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCA...CGGTCCACCTTGGATTCTCACAGGCAGTGTGCCTGAGGAGCCTTTTCCCCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 90 bp | TTCAGAAAAGCTGCCTTTTCGTCTGAGGAGCAGGTTCCGATAACGTaGCACTTGGCTATCTTGGAAAGCTGCACAGCAAACTGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRKAAFSSEEQVPIT*HLAILESCTANWPV Trigger: CACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCACGTTATCGGAACCTGCTCCTCAGACGAAAAGGCAGCTTTTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCGCTTCTCTCAAAGGCCAAGAAGCAAAATGGCAACCCAGGACACCTGACTGCCGATCACACCCAATaGATTTCAGAAAAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLSKAKKQNGNPGHLTADHTQ*ISEKLP Trigger: AGGCAGCTTTTCTGAAATCAATTGGGTGTGATCGGC...AGTCAGGTGTCCTGGGTTGCCATTTTGCTTCTTGGCCTTTGAGAGAAGCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS-3UTR CAA 90 bp | TGGACCGACACTGCTTTCTCAACTGTTCAGTGCTTGACACGAGAACGACTGCTTGAGTCCTGTAGGGCTTaGGTAGCCAGAGATAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: WTDTAFSTVQCLTRERLLESCRA*VARDKP Trigger: GGGTTTATCTCTGGCTACCAAAGCCCTACAGGACTC...AAGCAGTCGTTCTCGTGTCAAGCACTGAACAGTTGAGAAAGCAGTGTCGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS TCA 90 bp | TGCAGTGGTGCCACTAACCAGCATGGTGAGATACTCTGGTTTCACTaGAGGCATGGGAATTGCAATGCTAGCAGGCACCACTGTATACTC | + |
|
Preference number: 5 (lower is better) Translates to: CSGATNQHGEILWFH*RHGNCNASRHHCIL Trigger: GAGTATACAGTGGTGCCTGCTAGCATTGCAATTCCCATGCCTTCAGTGAAACCAGAGTATCTCACCATGCTGGTTAGTGGCACCACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS TCA 90 bp | GGTACTCCTGCTTCAGAACCGTCTCCACAGGCTCTGTTCTGTAGTTaGTGGGCCGATCACACCCAATTGATTTCAGAAAAGCTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GTPASEPSPQALFCS*WADHTQLISEKLPF Trigger: AAAAGGCAGCTTTTCTGAAATCAATTGGGTGTGATCGGCCCATCAACTACAGAACAGAGCCTGTGGAGACGGTTCTGAAGCAGGAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS TCA 90 bp | CGACTTCTTCAGGAGCTTGGTTGGCAAAACTCCCGCTTTTATTGGTaGGAGTCCTGTAGGGCTTTGGTAGCCAGAGATAAACCCAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLQELGWQNSRFYW*ESCRALVARDKPNH Trigger: GTGATTGGGTTTATCTCTGGCTACCAAAGCCCTACAGGACTCTCACCAATAAAAGCGGGAGTTTTGCCAACCAAGCTCCTGAAGAAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | AGACACCTCTGTTTGCTGGATCACTTTCCCAATAACTTAACAAGATTAAATTTGGAGTCCTGTAGGGCTTaGGTAGCCAGAGATAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RHLCLLDHFPNNLTRLNLESCRA*VARDKP Trigger: GGGTTTATCTCTGGCTACCAAAGCCCTACAGGACTC...CAAATTTAATCTTGTTAAGTTATTGGGAAAGTGATCCAGCAAACAGAGGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | CTCACACATCAGGAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGATGGCACTTGGCTATCTaGGAAAGCTGCACAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTHQELIYFPGTIKSGMRWHLAI*ESCTAN Trigger: GTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCA...TCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTCCTGATGTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS-3UTR CAA 90 bp | GAATTAATTTACTTCCCTGGAACAATAAAATCTGGAATGAGACCGTCCATGACTGCCGATCACACCCAATaGATTTCAGAAAAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ELIYFPGTIKSGMRPSMTADHTQ*ISEKLP Trigger: AGGCAGCTTTTCTGAAATCAATTGGGTGTGATCGGC...AGTCATGGACGGTCTCATTCCAGATTTTATTGTTCCAGGGAAGTAAATTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 72 bp | GGCACTGGGCAGTCCCGGCGCAGGGTGACGGCCTCGTaGAAGTTAGGGCTCAGCCGGGTCACCACCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTGQSRRRVTAS*KLGLSRVTTSF Trigger: GAAGCTGGTGGTGACCCGGCTGAGCCCTAACTTCCACGAGGCCGTCACCCTGCGCCGGGACTGCCCAGTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS TCA 72 bp | GTTCGGGGGATGGCGGAGCCCTGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCCACGATGGCTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRGMAEPWKSRK*RAYDMSTMARA Trigger: GGCCCGAGCCATCGTGGACATGTCGTACGCCCGTCACTTCCTGGACTTCCAGGGCTCCGCCATCCCCCGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS GCA 72 bp | TGGAAGTTAGGGCTCAGCCGGGTCACCACCAGCTTCTaGATGGTTCGGGGGATGGCGGAGCCCTGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WKLGLSRVTTSF*MVRGMAEPWKS Trigger: GGACTTCCAGGGCTCCGCCATCCCCCGAACCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCTAACTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
||
| CDS TCA 72 bp | GCACAGCAAACTGGCCTGTGCCCCCAGCGGCTGCTGTaGCCAGAACTTTCTTCCCTTCTGACAGTTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AQQTGLCPQRLL*PELSSLLTVPQ Trigger: TTGGGGAACTGTCAGAAGGGAAGAAAGTTCTGGTCACAGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS GCA 72 bp | GTTCCGATAACGTGGCACTTGGCTATCTTGGAAAGCTaGACAGCAAACTGGCCTGTGCCCCCAGCGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPITWHLAILES*TANWPVPPAAA Trigger: AGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCACGTTATCGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
||
| CDS CCA 72 bp | TGGCACTTGGCTATCTTGGAAAGCTGCACAGCAAACTaGCCTGTGCCCCCAGCGGCTGCTGTGACCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: WHLAILESCTAN*PVPPAAAVTRT Trigger: AGTTCTGGTCACAGCAGCCGCTGGGGGCACAGGCCAGTTTGCTGTGCAGCTTTCCAAGATAGCCAAGTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS TCA 72 bp | CCCAGCGGCTGCTGTGACCAGAACTTTCTTCCCTTCTaGCAGTTCCCCAAGCTCTTCCAGGCTGAGGTATGC | + |
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Preference number: 6 (lower is better) Translates to: PSGCCDQNFLPF*QFPKLFQAEVC Trigger: GCATACCTCAGCCTGGAAGAGCTTGGGGAACTGTCAGAAGGGAAGAAAGTTCTGGTCACAGCAGCCGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS TCA 72 bp | TATAGTCGACAGCCTGAAACACGGACTCCAGGCCAATaGACCTTCCATCCGGAGCCAGGTGTCCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: YSRQPETRTPGQ*TFHPEPGVPGP Trigger: TGGACCTGGGACACCTGGCTCCGGATGGAAGGTTCATTGGCCTGGAGTCCGTGTTTCAGGCTGTCGACTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS GCA 72 bp | CGGGTCGTAGCGGCCAGCCGAATAGTTGATGTCAGATaGGTTAATACCAACGAATCGGTTCCGGACGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVVAASRIVDVR*VNTNESVPDEE Trigger: CTCCTCGTCCGGAACCGATTCGTTGGTATTAACGCATCTGACATCAACTATTCGGCTGGCCGCTACGACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS CCA 72 bp | CACCTCACCAATCCCTTCAAAACCTATGTCAAAGGGTaGCTTCAGGGACGGGTCGTAGCGGCCAGCCGAATA | + |
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Preference number: 6 (lower is better) Translates to: HLTNPFKTYVKG*LQGRVVAASRI Trigger: TATTCGGCTGGCCGCTACGACCCGTCCCTGAAGCCACCCTTTGACATAGGTTTTGAAGGGATTGGTGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060223.4 |
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| CDS CCA 72 bp | CTTTGGTGGCCAAGGCATCCACAGCCAGGTCAAACATaGCTCCCCCAACAGACTCATAGACTACGTCAACGC | + |
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Preference number: 6 (lower is better) Translates to: LWWPRHPQPGQT*LPQQTHRLRQR Trigger: GCGTTGACGTAGTCTATGAGTCTGTTGGGGGAGCCATGTTTGACCTGGCTGTGGATGCCTTGGCCACCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS TCA 72 bp | GCCACTAACCAGCATGGTGAGATACTCTGGTTTCACTaGAGGCATGGGAATTGCAATGCTAGCAGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: ATNQHGEILWFH*RHGNCNASRHH Trigger: GTGGTGCCTGCTAGCATTGCAATTCCCATGCCTTCAGTGAAACCAGAGTATCTCACCATGCTGGTTAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS TCA 72 bp | GCTTCAGAACCGTCTCCACAGGCTCTGTTCTGTAGTTaGTGGGCCGATCACACCCAATTGATTTCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: ASEPSPQALFCS*WADHTQLISEK Trigger: CTTTTCTGAAATCAATTGGGTGTGATCGGCCCATCAACTACAGAACAGAGCCTGTGGAGACGGTTCTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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| CDS TCA 72 bp | CAGGAGCTTGGTTGGCAAAACTCCCGCTTTTATTGGTaGGAGTCCTGTAGGGCTTTGGTAGCCAGAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: QELGWQNSRFYW*ESCRALVARDK Trigger: TTTATCTCTGGCTACCAAAGCCCTACAGGACTCTCACCAATAAAAGCGGGAGTTTTGCCAACCAAGCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060223.4 ENSMUST00000235383.2 |
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