Pregenerated sensors for YWHAZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022285Ensembl transcript IDs: ENSMUST00000022894.14, ENSMUST00000110361.8, ENSMUST00000110362.4
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCTGTGGTCAAGAGTGTGCACGCAGACACACACGATCCTAGCGTaGATCCACAGGGTGTTTGTGTCACAGCCTCACAAGTGCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ELWSRVCTQTHTILA*IHRVFVSQPHKCSR Trigger: CCTGGAGCACTTGTGAGGCTGTGACACAAACACCCTGTGGATGCACGCTAGGATCGTGTGTGTCTGCGTGCACACTCTTGACCACAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGTGGTCAAGAGTGTGCACGCAGACACACACGATCCTAGCGTGCATCCATCACAGCCTCACAAGTaGTCCAGGCCTTACAGTACC | + |
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Preference number: 2 (lower is better) Translates to: GAVVKSVHADTHDPSVHPSQPHK*SRPYST Trigger: GGTACTGTAAGGCCTGGAGCACTTGTGAGGCTGTGA...TGGATGCACGCTAGGATCGTGTGTGTCTGCGTGCACACTCTTGACCACAGCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGTCAAGAGTGTGCACGCAGACACACACGATCCTAGCGTGCATCCACAGGCAAAGACTACACTCATaGCTGGAACCCATTATCCTG | + |
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Preference number: 2 (lower is better) Translates to: LWSRVCTQTHTILACIHRQRLHS*LEPIIL Trigger: CAGGATAATGGGTTCCAGTCATGAGTGTAGTCTTTG...CCTGTGGATGCACGCTAGGATCGTGTGTGTCTGCGTGCACACTCTTGACCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGTGGTCAAGAGTGTGCACGCAGACACACACGATCCTAGCGTGCATCCACAAAGACTACACTCATaGCTGGAACCCATTATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GAVVKSVHADTHDPSVHPQRLHS*LEPIIL Trigger: CAGGATAATGGGTTCCAGTCATGAGTGTAGTCTTTG...TGGATGCACGCTAGGATCGTGTGTGTCTGCGTGCACACTCTTGACCACAGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAGAGACAACTTCTGGAGCTGTGGTCAAGAGTGTGCACGCAGACACACACGATCACAGCCTCACAAGTaGTCCAGGCCTTACAGTACC | + |
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Preference number: 2 (lower is better) Translates to: SRDNFWSCGQECARRHTRSQPHK*SRPYST Trigger: GGTACTGTAAGGCCTGGAGCACTTGTGAGGCTGTGA...TCGTGTGTGTCTGCGTGCACACTCTTGACCACAGCTCCAGAAGTTGTCTCTAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAGACAACTTCTGGAGCTGTGGTCAAGAGTGTGCACGCAGACACACACGATGGAACCCATTATCCTaGTTATTCCCCGCCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: SRDNFWSCGQECARRHTRWNPLS*LFPAST Trigger: TGTGCTGGCGGGGAATAATCAGGATAATGGGTTCCA...TCGTGTGTGTCTGCGTGCACACTCTTGACCACAGCTCCAGAAGTTGTCTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR GCA 90 bp | ATTGGGTCACGACTTTGTCTAGAGACAACTTCTGGAGCTGTGGTCAAGAGTGTGTCACAGCCTCACAAGTaGTCCAGGCCTTACAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: IGSRLCLETTSGAVVKSVSQPHK*SRPYST Trigger: GGTACTGTAAGGCCTGGAGCACTTGTGAGGCTGTGA...CACACTCTTGACCACAGCTCCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCTTACCAGAGTAAATTGGGTCACGACTTTGTCTAGAGACAACTTCTGGTGGAACCCATTATCCTaGTTATTCCCCGCCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: SALTRVNWVTTLSRDNFWWNPLS*LFPAST Trigger: TGTGCTGGCGGGGAATAATCAGGATAATGGGTTCCA...CCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAATTTACTCTGGTAAGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCTTACCAGAGTAAATTGGGTCACGACTTTGTCTAGAGACAACTTCTGGCAAAGACTACACTCATaGCTGGAACCCATTATCCTG | + |
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Preference number: 2 (lower is better) Translates to: SALTRVNWVTTLSRDNFWQRLHS*LEPIIL Trigger: CAGGATAATGGGTTCCAGTCATGAGTGTAGTCTTTG...CCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAATTTACTCTGGTAAGGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR CCA 72 bp | GTAAATTGGGTCACGACTTTGTCTAGAGACAACTTCTaGAGCTGTGGTCAAGAGTGTGCACGCAGACACACA | + |
|
Preference number: 3 (lower is better) Translates to: VNWVTTLSRDNF*SCGQECARRHT Trigger: TGTGTGTCTGCGTGCACACTCTTGACCACAGCTCCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| 3UTR TCA 72 bp | AAGTTAAATACATGGGATTTTGTTTACCGCTGTGCTTaGTACGTATGGAGCCGGGCACACCAAGCAACTCGT | + |
|
Preference number: 3 (lower is better) Translates to: KLNTWDFVYRCA*YVWSRAHQATR Trigger: ACGAGTTGCTTGGTGTGCCCGGCTCCATACGTATCAAGCACAGCGGTAAACAAAATCCCATGTATTTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| CDS-3UTR CCA 90 bp | GCCTGTGCCCAACATGGAAATAGAGGAATAGAATCCCAGGCAGACTGTAAGAGCTATGCTTGCTGTGACTaGTCCACAATTCCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ACAQHGNRGIESQADCKSYACCD*STIPFL Trigger: CAAGAAAGGAATTGTGGACCAGTCACAGCAAGCATA...GCTCTTACAGTCTGCCTGGGATTCTATTCCTCTATTTCCATGTTGGGCACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022894.14 |
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| 3UTR CAA 72 bp | AAAGTTAAATACATGGGATTTTGTTTACCGCTGTGCTaGATACGTATGGAGCCGGGCACACCAAGCAACTCG | + |
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Preference number: 4 (lower is better) Translates to: KVKYMGFCLPLC*IRMEPGTPSNS Trigger: CGAGTTGCTTGGTGTGCCCGGCTCCATACGTATCAAGCACAGCGGTAAACAAAATCCCATGTATTTAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| CDS-3UTR CCA 90 bp | TCTGCCCTTACCAGAGTAAATTGGGTCACGACTTTGTCTAGAGACAACTTCTGGTATGCTTGCTGTGACTaGTCCACAATTCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SALTRVNWVTTLSRDNFWYACCD*STIPFL Trigger: CAAGAAAGGAATTGTGGACCAGTCACAGCAAGCATA...CCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAATTTACTCTGGTAAGGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCACGACTTTGTCTAGAGACAACTTCTGGAGCTGTGGTCAAGAGTGTTATGCTTGCTGTGACTaGTCCACAATTCCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NWVTTLSRDNFWSCGQECYACCD*STIPFL Trigger: CAAGAAAGGAATTGTGGACCAGTCACAGCAAGCATA...ACACTCTTGACCACAGCTCCAGAAGTTGTCTCTAGACAAAGTCGTGACCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022894.14 ENSMUST00000110361.8 ENSMUST00000110362.4 |
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