Pregenerated sensors for YWHAQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076432Ensembl transcript IDs: ENSMUST00000135088.9
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGGAAAAGTATTGAAGTaGAGGCTTGGACTTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: IWRNIVQLYSARHLRQVYGKVLK*RLGLVD Trigger: GTCCACAAGTCCAAGCCTGCACTTCAATACTTTTCC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACAACCTCCAGAATATGTaGCACAGGAGACATTTCGAT | + |
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Preference number: 2 (lower is better) Translates to: IWRNIVQLYSARHLRQVYNLQNM*HRRHFD Trigger: ATCGAAATGTCTCCTGTGTCACATATTCTGGAGGTT...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCTTAAATACCAAGTGTaGTGTCACTCCTCTACACAA | + |
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Preference number: 2 (lower is better) Translates to: IWRNIVQLYSARHLRQVYLKYQV*CHSSTQ Trigger: TTGTGTAGAGGAGTGACAGCACACTTGGTATTTAAG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACATTGAAGTGCAGGCTTaGACTTGTGGACTTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: IWRNIVQLYSARHLRQVYIEVQA*TCGLYF Trigger: GAAATAAAGTCCACAAGTCCAAGCCTGCACTTCAAT...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACAGTGCAGGCTTGGACTaGTGGACTTTATTTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: IWRNIVQLYSARHLRQVYSAGLD*WTLFLL Trigger: AAGGAGAAATAAAGTCCACAAGTCCAAGCCTGCACT...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCTGCATGGAAAAGTATaGAAGTGCAGGCTTGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: IWRNIVQLYSARHLRQVYLHGKV*KCRLGL Trigger: AAGTCCAAGCCTGCACTTCAATACTTTTCCATGCAG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCCACCGACAGCAGGTTaGGCTCCTCGTTGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYPPTAG*APRWTA Trigger: AGCTGTCCAACGAGGAGCGCAACCTGCTGTCGGTGG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGGACCGTGGTGCAGATaGACCTCAGCTCCGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYGPWCR*TSAPTP Trigger: TGGAGTCGGAGCTGAGGTCCATCTGCACCACGGTCC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCAGCCCCAGGCGGATTaGATGCGTAGGCTGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYQPQAD*MRRLHL Trigger: GAGATGCAGCCTACGCATCCAATCCGCCTGGGGCTG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACATTCCAGGACCGTGGTaGAGATGGACCTCAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYIPGPW*RWTSAP Trigger: CGGAGCTGAGGTCCATCTGCACCACGGTCCTGGAAT...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGAGGTGTCGGTCTTCTaGTCAATGCTCGAGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYEVSVF*SMLEMT Trigger: GGTCATCTCGAGCATTGAGCAGAAGACCGACACCTC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR GCA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGCTGCATCTCCTTCTTaGTTATATCAAACGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IWRNIVQLYSARHLRQVYAASPS*LYQTPL Trigger: AAGAGGCGTTTGATATAAGCAAGAAGGAGATGCAGC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGCCACCGACAGCAGGTaGCGCTCCTCGTTGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: IWRNIVQLYSARHLRQVYATDSR*RSSLDS Trigger: GCTGTCCAACGAGGAGCGCAACCTGCTGTCGGTGGC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCTCTTGGTAGGCTCCTaGGGAATTTTCTATTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IWRNIVQLYSARHLRQVYLLVGS*GIFYCL Trigger: CAAACAATAGAAAATTCCCAAGGAGCCTACCAAGAG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACGGAATTTTCTATTGTTaGTTTTCGATCATCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: IWRNIVQLYSARHLRQVYGIFYC*FSIIAT Trigger: TGTGGCGATGATCGAAAACAAACAATAGAAAATTCC...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGAGAAATATAGTCCAACTTTACAGTGCCAGGCACCTTAGACAAGTGTACCTTGGGAATTTTCTATaGTTTGTTTTCGATCATCGC | + |
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Preference number: 5 (lower is better) Translates to: IWRNIVQLYSARHLRQVYLGNFL*FVFDHR Trigger: GCGATGATCGAAAACAAACAATAGAAAATTCCCAAG...GTACACTTGTCTAAGGTGCCTGGCACTGTAAAGTTGGACTATATTTCTCCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135088.9 |
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