Pregenerated sensors for YWHAG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051391Ensembl transcript IDs: ENSMUST00000055808.6, ENSMUST00000198270.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAACCCCCGGGCGAAGCCTCTCCGGCCCCTCTGTCCACTCTGGTaGCCAAGCTTCCTCTGCTGCGGCCTTGCGCGGTCTCGGTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: TNPRAKPLRPLCPLW*PSFLCCGLARSRLG Trigger: CCCTAACCGAGACCGCGCAAGGCCGCAGCAGAGGAAGCTTGGCCACCAGAGTGGACAGAGGGGCCGGAGAGGCTTCGCCCGGGGGTTTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR GCA 90 bp | CCTGCCGAACCTCGGCTACCCTCCACTAAGCACTTGGGAAAGGAGTaGCGGGGCTGGAGGGAGGCAGGGACAACTGGCTTAGGGACCAGG | + |
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Preference number: 1 (lower is better) Translates to: PAEPRLPSTKHLGKE*RGWREAGTTGLGTR Trigger: CCTGGTCCCTAAGCCAGTTGTCCCTGCCTCCCTCCAGCCCCGGCACTCCTTTCCCAAGTGCTTAGTGGAGGGTAGCCGAGGTTCGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR GCA 90 bp | TCCTTCCGCAGCCACGGCACCAGCTCAAGTGGGCGACAAAGTGGCTaGTGGGCCTCTGAAGACAAGTTAAGCAAGTTTGGGGCGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SFRSHGTSSSGRQSG*WASEDKLSKFGALP Trigger: GGGCAGCGCCCCAAACTTGCTTAACTTGTCTTCAGAGGCCCAGCAGCCACTTTGTCGCCCACTTGAGCTGGTGCCGTGGCTGCGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 90 bp | GCACTTGGGAAAGGAGTGCCGGGGCTGGAGGGAGGCAGGGACAACTaGCTTAGGGACCAGGCTGCCTCAAGTGAACTGCCTCTTCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: ALGKGVPGLEGGRDN*LRDQAASSELPLPS Trigger: ACTAGGAAGAGGCAGTTCACTTGAGGCAGCCTGGTCCCTAAGCCAGTTGTCCCTGCCTCCCTCCAGCCCCGGCACTCCTTTCCCAAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 90 bp | TCCGCTTGCTCGTTCCGAGCCTGCACAACAGTCCGGACGTCTGTGTaGGGCTGCTACTCCCATACCAGCATAGCTAGCCTGACTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: SACSFRACTTVRTSV*GCYSHTSIASLTFH Trigger: GTGGAAAGTCAGGCTAGCTATGCTGGTATGGGAGTAGCAGCCTCACACAGACGTCCGGACTGTTGTGCAGGCTCGGAACGAGCAAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR GCA 90 bp | CTCCAGTCCTACGCCTCGGGGCACCTGCATGCTGCTAGCACAAGGTaGAGAGTAGACTTGGGTGCTGAGGAACATTCAACAGGCAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LQSYASGHLHAASTR*RVDLGAEEHSTGSD Trigger: GTCACTGCCTGTTGAATGTTCCTCAGCACCCAAGTCTACTCTGCACCTTGTGCTAGCAGCATGCAGGTGCCCCGAGGCGTAGGACTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 90 bp | TTTCATTCAAAAAGGGGAAACCAGGAAAGCTTAGGTCAAACAGGGTaGGCATGGCCTCCTGCCGAACCTCGGCTACCCTCCACTAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: FHSKRGNQESLGQTG*AWPPAEPRLPSTKH Trigger: GTGCTTAGTGGAGGGTAGCCGAGGTTCGGCAGGAGGCCATGCTCACCCTGTTTGACCTAAGCTTTCCTGGTTTCCCCTTTTTGAATGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 90 bp | CACAGCCAAAGAGAGAAAACAGCCACGGAACTGAGGACAAGGGCATaGACAGAAGAATCCTTACTGGAACCACAGAACGCACTGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: HSQREKTATELRTRA*TEESLLEPQNALNE Trigger: CTCATTCAGTGCGTTCTGTGGTTCCAGTAAGGATTCTTCTGTCCATGCCCTTGTCCTCAGTTCCGTGGCTGTTTTCTCTCTTTGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 90 bp | CAAGGGCATGGACAGAAGAATCCTTACTGGAACCACAGAACGCACTaGATGAGGGCCATCCATCTCCGGTTTTTCTTCTTAGAACCCTAC | + |
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Preference number: 1 (lower is better) Translates to: QGHGQKNPYWNHRTH*MRAIHLRFFFLEPY Trigger: GTAGGGTTCTAAGAAGAAAAACCGGAGATGGATGGCCCTCATTCAGTGCGTTCTGTGGTTCCAGTAAGGATTCTTCTGTCCATGCCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 90 bp | ATATTTTCACTGCATAACATGACAAGAAAGCACAGAGGCGCGTTCTaGGAACGTCCGCGCGTTCTCCTGCACTGCGATAGTTATAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: IFSLHNMTRKHRGAF*ERPRVLLHCDSYSF Trigger: GAAACTATAACTATCGCAGTGCAGGAGAACGCGCGGACGTTCTCAGAACGCGCCTCTGTGCTTTCTTGTCATGTTATGCAGTGAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR TCA 90 bp | AACGTCCGCGCGTTCTCCTGCACTGCGATAGTTATAGTTTCACCATaGCAAACACCAGACATTATTAAGAGTAAGCTAACACTGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: NVRAFSCTAIVIVSP*QTPDIIKSKLTLVF Trigger: AAACACCAGTGTTAGCTTACTCTTAATAATGTCTGGTGTTTGTCATGGTGAAACTATAACTATCGCAGTGCAGGAGAACGCGCGGACGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR TCA 90 bp | TGGCGTCATGTATGGCTGTCATGTATAAATACTGTAAACTACAATTaGGTGTTAATACTGTCAACCCGTCAGAGACTTCCAAATACAGGG | + |
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Preference number: 1 (lower is better) Translates to: WRHVWLSCINTVNYN*VLILSTRQRLPNTG Trigger: CCCTGTATTTGGAAGTCTCTGACGGGTTGACAGTATTAACACTCAATTGTAGTTTACAGTATTTATACATGACAGCCATACATGACGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCCACAGACACGCTCACTaGGGACAAGGAGACAAACCC | + |
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Preference number: 2 (lower is better) Translates to: TVKEGEGTKLTAGLPLSLHRHAH*GQGDKP Trigger: GGGTTTGTCTCCTTGTCCGCAGTGAGCGTGTCTGTG...GAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR CCA 90 bp | GCTCCGAGAAAGGGCATGCTGGGACTGTGCAGAGGGGCGTCATCCTTCCGCAGCTCCGTTTTCTCTGTGTaGGGGGTATTTAACGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: APRKGMLGLCRGASSFRSSVFSV*GVFNGF Trigger: GAAACCGTTAAATACCCCCCACACAGAGAAAACGGA...GCTGCGGAAGGATGACGCCCCTCTGCACAGTCCCAGCATGCCCTTTCTCGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTGTGCAGCGACCTCATaGGAGAGAAGCCAATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: TVKEGEGTKLTAGLPLSLCAATS*ERSQSQ Trigger: TTGAGATTGGCTTCTCTCTCATGAGGTCGCTGCACA...GAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAAAGGGGAAACCAGGAAAGCTTAGGTCAAACAGGGTGAGCATGGCCTCCTCGTGGGTTTCTCCCTaGGAAGGTCACCCCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FKKGKPGKLRSNRVSMASSWVSP*EGHPSL Trigger: AAGGGAGGGGTGACCTTCCCAGGGAGAAACCCACGA...GGAGGCCATGCTCACCCTGTTTGACCTAAGCTTTCCTGGTTTCCCCTTTTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAAAGGGGAAACCAGGAAAGCTTAGGTCAAACAGGGTGAGCATGGCCTCCAACCACAGAACGCACTaGATGAGGGCCATCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: FKKGKPGKLRSNRVSMASNHRTH*MRAIHL Trigger: GAGATGGATGGCCCTCATTCAGTGCGTTCTGTGGTT...GGAGGCCATGCTCACCCTGTTTGACCTAAGCTTTCCTGGTTTCCCCTTTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAAAGGGGAAACCAGGAAAGCTTAGGTCAAACAGGGTGAGCATGGCCTCCCTGCCTCAAGTGAACTaGCTCTTCCTAGTGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FKKGKPGKLRSNRVSMASLPQVN*LFLVGS Trigger: GGAACCCACTAGGAAGAGGCAGTTCACTTGAGGCAG...GGAGGCCATGCTCACCCTGTTTGACCTAAGCTTTCCTGGTTTCCCCTTTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CAA 90 bp | GCGGATGAAAGCCGACCTGACAAAGGAAAACTGAGAACCCATGGCTaGGCGTCATGTATGGCTGTCATGTATAAATACTGTAAACTACAA | + |
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Preference number: 2 (lower is better) Translates to: ADESRPDKGKLRTHG*ASCMAVMYKYCKLQ Trigger: TTGTAGTTTACAGTATTTATACATGACAGCCATACATGACGCCAAGCCATGGGTTCTCAGTTTTCCTTTGTCAGGTCGGCTTTCATCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CAA 90 bp | TTGGCGTCATGTATGGCTGTCATGTATAAATACTGTAAACTACAATaGAGTGTTAATACTGTCAACCCGTCAGAGACTTCCAAATACAGG | + |
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Preference number: 2 (lower is better) Translates to: LASCMAVMYKYCKLQ*SVNTVNPSETSKYR Trigger: CCTGTATTTGGAAGTCTCTGACGGGTTGACAGTATTAACACTCAATTGTAGTTTACAGTATTTATACATGACAGCCATACATGACGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 72 bp | CGGGCGAAGCCTCTCCGGCCCCTCTGTCCACTCTGGTaGCCAAGCTTCCTCTGCTGCGGCCTTGCGCGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RAKPLRPLCPLW*PSFLCCGLARS Trigger: AGACCGCGCAAGGCCGCAGCAGAGGAAGCTTGGCCACCAGAGTGGACAGAGGGGCCGGAGAGGCTTCGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 72 bp | GCGCGGTCTCGGTTAGGGGGTGCTGGCACACTAGCATaGGGAGGGGCTCCGAGAAAGGGCATGCTGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: ARSRLGGAGTLA*GGAPRKGMLGL Trigger: CAGTCCCAGCATGCCCTTTCTCGGAGCCCCTCCCCATGCTAGTGTGCCAGCACCCCCTAACCGAGACCGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 72 bp | CCCTCCACTAAGCACTTGGGAAAGGAGTGCCGGGGCTaGAGGGAGGCAGGGACAACTGGCTTAGGGACCAGG | + |
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Preference number: 3 (lower is better) Translates to: PSTKHLGKECRG*REAGTTGLGTR Trigger: CCTGGTCCCTAAGCCAGTTGTCCCTGCCTCCCTCCAGCCCCGGCACTCCTTTCCCAAGTGCTTAGTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR GCA 72 bp | TACGCCTCGGGGCACCTGCATGCTGCTAGCACAAGGTaGAGAGTAGACTTGGGTGCTGAGGAACATTCAACA | + |
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Preference number: 3 (lower is better) Translates to: YASGHLHAASTR*RVDLGAEEHST Trigger: TGTTGAATGTTCCTCAGCACCCAAGTCTACTCTGCACCTTGTGCTAGCAGCATGCAGGTGCCCCGAGGCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 72 bp | CTGCATAACATGACAAGAAAGCACAGAGGCGCGTTCTaGGAACGTCCGCGCGTTCTCCTGCACTGCGATAGT | + |
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Preference number: 3 (lower is better) Translates to: LHNMTRKHRGAF*ERPRVLLHCDS Trigger: ACTATCGCAGTGCAGGAGAACGCGCGGACGTTCTCAGAACGCGCCTCTGTGCTTTCTTGTCATGTTATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR CCA 72 bp | TACAACACCAGCATGCACAATACTGTATCAATAGGATaGAGGAGCAGCCGCGCGGCACTGGGGACAGCATCA | + |
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Preference number: 3 (lower is better) Translates to: YNTSMHNTVSIG*RSSRAALGTAS Trigger: TGATGCTGTCCCCAGTGCCGCGCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR TCA 72 bp | GAAAGCACAGCCAAAGAGAGAAAACAGCCACGGAACTaGGGACAAGGGCATGGACAGAAGAATCCTTACTGG | + |
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Preference number: 3 (lower is better) Translates to: ESTAKERKQPRN*GQGHGQKNPYW Trigger: CCAGTAAGGATTCTTCTGTCCATGCCCTTGTCCTCAGTTCCGTGGCTGTTTTCTCTCTTTGGCTGTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR CCA 72 bp | GAACATTCAACAGGCAGTGACACTGAGACGGAGCCCTaGCTGCTGAGAGCAGAGTCTCTGATAAATGACATA | + |
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Preference number: 3 (lower is better) Translates to: EHSTGSDTETEP*LLRAESLINDI Trigger: TATGTCATTTATCAGAGACTCTGCTCTCAGCAGCCAGGGCTCCGTCTCAGTGTCACTGCCTGTTGAATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR GCA 72 bp | ACCATGAGTTCTCCAGAAGACATAAACTGCACACTCTaGATGCAACCGGGCGTGTTTATGGAAAGGGCTATC | + |
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Preference number: 3 (lower is better) Translates to: TMSSPEDINCTL*MQPGVFMERAI Trigger: GATAGCCCTTTCCATAAACACGCCCGGTTGCATGCAGAGTGTGCAGTTTATGTCTTCTGGAGAACTCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 72 bp | GGACAGAAGAATCCTTACTGGAACCACAGAACGCACTaGATGAGGGCCATCCATCTCCGGTTTTTCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: GQKNPYWNHRTH*MRAIHLRFFFL Trigger: TAAGAAGAAAAACCGGAGATGGATGGCCCTCATTCAGTGCGTTCTGTGGTTCCAGTAAGGATTCTTCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 72 bp | GGAGCCCTGGCTGCTGAGAGCAGAGTCTCTGATAAATaGCATACAGACCTGAATTTTCTCCGTTTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GALAAESRVSDK*HTDLNFLRFLC Trigger: ACAGAGAAAACGGAGAAAATTCAGGTCTGTATGTCATTTATCAGAGACTCTGCTCTCAGCAGCCAGGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| 3UTR TCA 72 bp | GCGTTCTCCTGCACTGCGATAGTTATAGTTTCACCATaGCAAACACCAGACATTATTAAGAGTAAGCTAACA | + |
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Preference number: 3 (lower is better) Translates to: AFSCTAIVIVSP*QTPDIIKSKLT Trigger: TGTTAGCTTACTCTTAATAATGTCTGGTGTTTGTCATGGTGAAACTATAACTATCGCAGTGCAGGAGAACGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGCATGCTGGGACTGTGCAGAGGGGCGTCATCCTTCCGCAGCCACGGCCCGCCGTCGTCGTCTTaGTGGTCGCTCGTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RKGMLGLCRGASSFRSHGPPSSS*WSLVQS Trigger: GCTCTGGACGAGCGACCAGCAAGACGACGACGGCGG...GCCGTGGCTGCGGAAGGATGACGCCCCTCTGCACAGTCCCAGCATGCCCTTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | GAACCTCGGCTACCCTCCACTAAGCACTTGGGAAAGGAGTGCCGGGGCTGGAGGAGGCTCAGCACGTCCTaGCACACGGCCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EPRLPSTKHLGKECRGWRRLSTS*HTASSS Trigger: GGAGCTGGAGGCCGTGTGCCAGGACGTGCTGAGCCT...CCTCCAGCCCCGGCACTCCTTTCCCAAGTGCTTAGTGGAGGGTAGCCGAGGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGCATGCTGGGACTGTGCAGAGGGGCGTCATCCTTCCGCAGCCACGGCCCCTCTTCTCCCCGGTaGCCACTTCTGCCAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RKGMLGLCRGASSFRSHGPSSPR*PLLPGN Trigger: GTTACCTGGCAGAAGTGGCCACCGGGGAGAAGAGGG...GCCGTGGCTGCGGAAGGATGACGCCCCTCTGCACAGTCCCAGCATGCCCTTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR GCA 90 bp | GAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCGCCAGCCGGGCTTTCTaGACCAGTTGCTCGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKEPSSRQVSRSPSSVLPASRAF*TSCSRS Trigger: GGACCGCGAGCAACTGGTGCAGAAAGCCCGGCTGGC...GGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | CACAGTGAGAATGAGGGACCTAGGGCTGAGACGGACCATGTAGGACATAGCAGCGCGGTCTTGGCCAGGTaGCACGCTTGCTCCGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: HSENEGPRAETDHVGHSSAVLAR*HACSGA Trigger: CGCCCCGGAGCAAGCGTGCCACCTGGCCAAGACCGC...GCTGCTATGTCCTACATGGTCCGTCTCAGCCCTAGGTCCCTCATTCTCACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR GCA 90 bp | ACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCGCCAGGTGGCACGCTTaGTCCGGGGCGTTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TVKEGEGTKLTAGLPLSLARWHA*SGAFWI Trigger: GATCCAGAACGCCCCGGAGCAAGCGTGCCACCTGGC...GAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTCACATGGCCAGGTGGCACGCTTaGTCCGGGGCGTTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: NQAHGRSPALPLQFYPHMARWHA*SGAFWI Trigger: GATCCAGAACGCCCCGGAGCAAGCGTGCCACCTGGC...CATGTGAGGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTAGGCTCAGCACGTCCTaGCACACGGCCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RRNQAHGRSPALPLQFYPRLSTS*HTASSS Trigger: GGAGCTGGAGGCCGTGTGCCAGGACGTGCTGAGCCT...AGGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | GAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTGTCGAGCTCGGCGATaGCGTCGTCGAAGGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EKEPSSRQVSRSPSSVLPCRARR*RRRRRS Trigger: AGACCGCCTTCGACGACGCCATCGCCGAGCTCGACA...GGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGCATGCTGGGACTGTGCAGAGGGGCGTCATCCTTCCGCAGCCACGGCCGATCTTCTTCTCGTTaGCGTCCGCAGACGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RKGMLGLCRGASSFRSHGRSSSR*RPQTSS Trigger: AGAAGACGTCTGCGGACGGCAACGAGAAGAAGATCG...GCCGTGGCTGCGGAAGGATGACGCCCCTCTGCACAGTCCCAGCATGCCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | AACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTCACATGCGTCGAAGGCGGTCTTaGCCAGGTGGCACGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NQAHGRSPALPLQFYPHMRRRRS*PGGTLA Trigger: AGCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACG...CATGTGAGGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | CCGCAGCCCCCTCCCAAACACCCATCAACCAAAACGGAACAGGGAGCTCTGACTCGGTCACGTTCTTCATaGCCGCGGCCATATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: PQPPPKHPSTKTEQGALTRSRSS*PRPYRR Trigger: ACGACGATATGGCCGCGGCCATGAAGAACGTGACCG...AGTCAGAGCTCCCTGTTCCGTTTTGGTTGATGGGTGTTTGGGAGGGGGCTGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | TTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCGCCGGATGGGGTGGGTaGGCTGCATGTGCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FSTVKEGEGTKLTAGLPLAGWGG*AACAPC Trigger: GCAAGGAGCACATGCAGCCCACCCACCCCATCCGGC...GAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | TTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTGTCGAGCTCGGCGATaGCGTCGTCGAAGGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSTVKEGEGTKLTAGLPLCRARR*RRRRRS Trigger: AGACCGCCTTCGACGACGCCATCGCCGAGCTCGACA...GAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTCACATGTCCGCAGACGTCTTCTaGTCGATGCTGCTGATGACC | + |
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Preference number: 4 (lower is better) Translates to: NQAHGRSPALPLQFYPHMSADVF*SMLLMT Trigger: GGTCATCAGCAGCATCGAGCAGAAGACGTCTGCGGA...CATGTGAGGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | CATCAGAGGCAGGCACACTTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCGCCGGATGGGGTGGGTaGGCTGCATGTGCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: HQRQAHFSTVKEGEGTKLAGWGG*AACAPC Trigger: GCAAGGAGCACATGCAGCCCACCCACCCCATCCGGC...GAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAAGTGTGCCTGCCTCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCGCATGTGCTCCTTGCTaGTCTCGTGGGCTTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSTVKEGEGTKLTAGLPLACAPC*SRGLRC Trigger: ACAGCGAAGCCCACGAGATCAGCAAGGAGCACATGC...GAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | ACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTCAGGTAGAACACCTTaGTCTCGTACTGGGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TVKEGEGTKLTAGLPLSLSGRTP*SRTGSR Trigger: GCGAGACCCAGTACGAGAGCAAGGTGTTCTACCTGA...GAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | TTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCATGGGGTGGGTGGGCTaGATGTGCTCCTTGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: FSTVKEGEGTKLTAGLPLMGWVG*MCSLLI Trigger: GATCAGCAAGGAGCACATGCAGCCCACCCACCCCAT...GAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR TCA 90 bp | GGACAGCATCAGAGGCAGGCACACTTCTCAACAGTAAAGGAAGGAGAAGGAACCGCATGTGCTCCTTGCTaGTCTCGTGGGCTTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GQHQRQAHFSTVKEGEGTACAPC*SRGLRC Trigger: ACAGCGAAGCCCACGAGATCAGCAAGGAGCACATGC...GGTTCCTTCTCCTTCCTTTACTGTTGAGAAGTGTGCCTGCCTCTGATGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR TCA 90 bp | CATCAGAGGCAGGCACACTTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCAGAAAACCGAGTAGTTaGGCGCCAGGCCCAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: HQRQAHFSTVKEGEGTKLRKPSS*APGPAG Trigger: TCCGGCTGGGCCTGGCGCTCAACTACTCGGTTTTCT...GAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAAGTGTGCCTGCCTCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AAATACAACACCAGCATGCACAATACTGTATCAATAGGATGGAGGAGCAGCCGCGCCAGCCGGGCTTTCTaGACCAGTTGCTCGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYNTSMHNTVSIGWRSSRASRAF*TSCSRS Trigger: GGACCGCGAGCAACTGGTGCAGAAAGCCCGGCTGGC...GCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | CACAGTGAGAATGAGGGACCTAGGGCTGAGACGGACCATGTAGGACATAGCAGCACCTTGCTCTCGTACTaGGTCTCGCTGCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSENEGPRAETDHVGHSSTLLSY*VSLQFL Trigger: CAAGAACTGCAGCGAGACCCAGTACGAGAGCAAGGT...GCTGCTATGTCCTACATGGTCCGTCTCAGCCCTAGGTCCCTCATTCTCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | CATCAGAGGCAGGCACACTTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCCCCTCTTCTCCCCGGTaGCCACTTCTGCCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQRQAHFSTVKEGEGTKLPSSPR*PLLPGN Trigger: GTTACCTGGCAGAAGTGGCCACCGGGGAGAAGAGGG...GAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAAGTGTGCCTGCCTCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | TTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCAGGTAGAACACCTTaGTCTCGTACTGGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVKEGEGTKLTAGLPLSGRTP*SRTGSR Trigger: GCGAGACCCAGTACGAGAGCAAGGTGTTCTACCTGA...GAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR CAA 72 bp | CACCTGCATGCTGCTAGCACAAGGTGCAGAGTAGACTaGGGTGCTGAGGAACATTCAACAGGCAGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: HLHAASTRCRVD*GAEEHSTGSDT Trigger: AGTGTCACTGCCTGTTGAATGTTCCTCAGCACCCAAGTCTACTCTGCACCTTGTGCTAGCAGCATGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | CTACAGTGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCAGCGGTCTTGGCCAGGTaGCACGCTTGCTCCGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQCKVINVKLPYRNTTPAAVLAR*HACSGA Trigger: CGCCCCGGAGCAAGCGTGCCACCTGGCCAAGACCGC...TGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACACTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR TCA 90 bp | ACACCAGACATTATTAAGAGTAAGCTAACACTGGTGTTTCTTTTGTCCCCTCCCAGAAAACCGAGTAGTTaGGCGCCAGGCCCAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPDIIKSKLTLVFLLSPPRKPSS*APGPAG Trigger: TCCGGCTGGGCCTGGCGCTCAACTACTCGGTTTTCT...GGGAGGGGACAAAAGAAACACCAGTGTTAGCTTACTCTTAATAATGTCTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | AAATACAACACCAGCATGCACAATACTGTATCAATAGGATGGAGGAGCAGCCGCTCCGCAGACGTCTTCTaGTCGATGCTGCTGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: KYNTSMHNTVSIGWRSSRSADVF*SMLLMT Trigger: GGTCATCAGCAGCATCGAGCAGAAGACGTCTGCGGA...GCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | ACACCAGACATTATTAAGAGTAAGCTAACACTGGTGTTTCTTTTGTCCCCTCCCTGGGTGGGCTGCATGTaGTCCTTGCTGATCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPDIIKSKLTLVFLLSPPWVGCM*SLLISW Trigger: CCACGAGATCAGCAAGGAGCACATGCAGCCCACCCA...GGGAGGGGACAAAAGAAACACCAGTGTTAGCTTACTCTTAATAATGTCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | ATCTGTAAGTTTATTTTGCTCAATGTACGACGGCTACATAATGACTCACATTCACCGCCGTCGTCGTCTTaGTGGTCGCTCGTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICKFILLNVRRLHNDSHSPPSSS*WSLVQS Trigger: GCTCTGGACGAGCGACCAGCAAGACGACGACGGCGG...TGAATGTGAGTCATTATGTAGCCGTCGTACATTGAGCAAAATAAACTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | AAATACAACACCAGCATGCACAATACTGTATCAATAGGATGGAGGAGCAGCCGCGGTTCCGTTCCTCATTaGACAGTGGTTCGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYNTSMHNTVSIGWRSSRGSVPH*TVVRSA Trigger: AGCTGAACGAACCACTGTCCAATGAGGAACGGAACC...GCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCATGCACACGTCGAAGGCGGTCTTaGCCAGGTGGCACGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKVINVKLPYRNTTPACTRRRRS*PGGTLA Trigger: AGCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACG...TGTGCATGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | TGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCATGCACATGGGTGGGCTGCATGTaGTCCTTGCTGATCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CKVINVKLPYRNTTPACTWVGCM*SLLISW Trigger: CCACGAGATCAGCAAGGAGCACATGCAGCCCACCCA...TGTGCATGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR GCA 90 bp | CTACAGTGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCAATGGGGTGGGTGGGCTaGATGTGCTCCTTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LQCKVINVKLPYRNTTPAMGWVG*MCSLLI Trigger: GATCAGCAAGGAGCACATGCAGCCCACCCACCCCAT...TGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCATGCACACGGTCACGTTCTTCATaGCCGCGGCCATATCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CKVINVKLPYRNTTPACTRSRSS*PRPYRR Trigger: ACGACGATATGGCCGCGGCCATGAAGAACGTGACCG...TGTGCATGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR CAA 72 bp | AGCCGACCTGACAAAGGAAAACTGAGAACCCATGGCTaGGCGTCATGTATGGCTGTCATGTATAAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRPDKGKLRTHG*ASCMAVMYKYC Trigger: ACAGTATTTATACATGACAGCCATACATGACGCCAAGCCATGGGTTCTCAGTTTTCCTTTGTCAGGTCGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCATGCACAACCTTGCTCTCGTACTaGGTCTCGCTGCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CKVINVKLPYRNTTPACTTLLSY*VSLQFL Trigger: CAAGAACTGCAGCGAGACCCAGTACGAGAGCAAGGT...TGTGCATGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| 3UTR CAA 72 bp | TGTATGGCTGTCATGTATAAATACTGTAAACTACAATaGAGTGTTAATACTGTCAACCCGTCAGAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMAVMYKYCKLQ*SVNTVNPSETS Trigger: GGAAGTCTCTGACGGGTTGACAGTATTAACACTCAATTGTAGTTTACAGTATTTATACATGACAGCCATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CAA 90 bp | GAACCTCGGCTACCCTCCACTAAGCACTTGGGAAAGGAGTGCCGGGGCTGGAGGGGCTGCATGTGCTCCTaGCTGATCTCGTGGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EPRLPSTKHLGKECRGWRGCMCS*LISWAS Trigger: CGAAGCCCACGAGATCAGCAAGGAGCACATGCAGCC...CCTCCAGCCCCGGCACTCCTTTCCCAAGTGCTTAGTGGAGGGTAGCCGAGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CAA 90 bp | GAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTCGTCGAAGGCGGTCTaGGCCAGGTGGCACGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKEPSSRQVSRSPSSVLPSSKAV*ARWHAC Trigger: GCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACGA...GGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGCATGCTGGGACTGTGCAGAGGGGCGTCATCCTTCCGCAGCCACGGCTCGATCTTCTTCTCGTaGCCGTCCGCAGACGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKGMLGLCRGASSFRSHGSIFFS*PSADVF Trigger: GAAGACGTCTGCGGACGGCAACGAGAAGAAGATCGA...GCCGTGGCTGCGGAAGGATGACGCCCCTCTGCACAGTCCCAGCATGCCCTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CAA 90 bp | AGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCTTCAGTTCTACCCTACCGCCGTCGTCGTCTaGCTGGTCGCTCGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRNQAHGRSPALPLQFYPTAVVV*LVARPE Trigger: CTCTGGACGAGCGACCAGCAAGACGACGACGGCGGT...AGGGTAGAACTGAAGAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | CCCGCTACACTCCAGTCCTACGCCTCGGGGCACCTGCATGCTGCTAGCACAAGGAGGTTCCGTTCCTCATaGGACAGTGGTTCGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PATLQSYASGHLHAASTRRFRSS*DSGSFS Trigger: GCTGAACGAACCACTGTCCAATGAGGAACGGAACCT...CCTTGTGCTAGCAGCATGCAGGTGCCCCGAGGCGTAGGACTGGAGTGTAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055808.6 |
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| CDS-3UTR CAA 90 bp | CATCAGAGGCAGGCACACTTCTCAACAGTAAAGGAAGGAGAAGGAACCAAGCTCTCGTCGAAGGCGGTCTaGGCCAGGTGGCACGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HQRQAHFSTVKEGEGTKLSSKAV*ARWHAC Trigger: GCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACGA...GAGCTTGGTTCCTTCTCCTTCCTTTACTGTTGAGAAGTGTGCCTGCCTCTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | ACAGTAAAGGAAGGAGAAGGAACCAAGCTCACGGCAGGTCTCCCGCTCTCCCTCAGGTTCCGTTCCTCATaGGACAGTGGTTCGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVKEGEGTKLTAGLPLSLRFRSS*DSGSFS Trigger: GCTGAACGAACCACTGTCCAATGAGGAACGGAACCT...GAGGGAGAGCGGGAGACCTGCCGTGAGCTTGGTTCCTTCTCCTTCCTTTACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | AAATACAACACCAGCATGCACAATACTGTATCAATAGGATGGAGGAGCAGCCGCGGCCAGGTGGCACGCTaGCTCCGGGGCGTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KYNTSMHNTVSIGWRSSRGQVAR*LRGVLD Trigger: ATCCAGAACGCCCCGGAGCAAGCGTGCCACCTGGCC...GCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | AAATACAACACCAGCATGCACAATACTGTATCAATAGGATGGAGGAGCAGCCGCACCGCCGTCGTCGTCTaGCTGGTCGCTCGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KYNTSMHNTVSIGWRSSRTAVVV*LVARPE Trigger: CTCTGGACGAGCGACCAGCAAGACGACGACGGCGGT...GCGGCTGCTCCTCCATCCTATTGATACAGTATTGTGCATGCTGGTGTTGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGGTAATAAATGTCAAGCTACCGTATAGAAATACAACACCAGCATGCACAGGCCAGGTGGCACGCTaGCTCCGGGGCGTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CKVINVKLPYRNTTPACTGQVAR*LRGVLD Trigger: ATCCAGAACGCCCCGGAGCAAGCGTGCCACCTGGCC...TGTGCATGCTGGTGTTGTATTTCTATACGGTAGCTTGACATTTATTACCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS-3UTR CAA 90 bp | ACACCAGACATTATTAAGAGTAAGCTAACACTGGTGTTTCTTTTGTCCCCTCCCTCGATCTTCTTCTCGTaGCCGTCCGCAGACGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPDIIKSKLTLVFLLSPPSIFFS*PSADVF Trigger: GAAGACGTCTGCGGACGGCAACGAGAAGAAGATCGA...GGGAGGGGACAAAAGAAACACCAGTGTTAGCTTACTCTTAATAATGTCTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS CAA 72 bp | GTGTCGAGCTCGGCGATGGCGTCGTCGAAGGCGGTCTaGGCCAGGTGGCACGCTTGCTCCGGGGCGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSSAMASSKAV*ARWHACSGAFW Trigger: CCAGAACGCCCCGGAGCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACGACGCCATCGCCGAGCTCGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS CCA 72 bp | TGTCGAGCTCGGCGATGGCGTCGTCGAAGGCGGTCTTaGCCAGGTGGCACGCTTGCTCCGGGGCGTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRARRWRRRRRS*PGGTLAPGRSG Trigger: TCCAGAACGCCCCGGAGCAAGCGTGCCACCTGGCCAAGACCGCCTTCGACGACGCCATCGCCGAGCTCGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS TCA 72 bp | GCCGGATGGGGTGGGTGGGCTGCATGTGCTCCTTGCTaGTCTCGTGGGCTTCGCTGTAGGCCTTCTCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: AGWGGWAACAPC*SRGLRCRPSQT Trigger: CGTCTGAGAAGGCCTACAGCGAAGCCCACGAGATCAGCAAGGAGCACATGCAGCCCACCCACCCCATCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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| CDS CCA 72 bp | CAGACGACTCCACCACGGTCGCCCTCTTCTCCCCGGTaGCCACTTCTGCCAGGTAACGGTAATAGTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QTTPPRSPSSPR*PLLPGNGNSPL Trigger: AAGGGGACTATTACCGTTACCTGGCAGAAGTGGCCACCGGGGAGAAGAGGGCGACCGTGGTGGAGTCGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055808.6 ENSMUST00000198270.2 |
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