Pregenerated sensors for YWHAB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018326

Ensembl transcript IDs: ENSMUST00000018470.10

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GCTTGCTCACCCTGTGCTCAACACCCCGCCCTGTCCATACAGTCCTaGCTAATACAGGCTTCCAAAGAAAACCACCCAAGGAAGCAGAAA	+
Preference number: 1 (lower is better) Translates to: ACSPCAQHPALSIQS*LIQASKENHPRKQK Trigger: TTTCTGCTTCCTTGGGTGGTTTTCTTTGGAAGCCTGTATTAGTCAGGACTGTATGGACAGGGCGGGGTGTTGAGCACAGGGTGAGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR TCA 90 bp	AATGATCAAGGGTTGGTAAGCCCTCAACCACAGGCAGAATTACTGTaGGTTACCAAACTCAGGATGCCGGTGGTCAGCATCTCACCAAGT	+
Preference number: 1 (lower is better) Translates to: NDQGLVSPQPQAELL*VTKLRMPVVSISPS Trigger: ACTTGGTGAGATGCTGACCACCGGCATCCTGAGTTTGGTAACTCACAGTAATTCTGCCTGTGGTTGAGGGCTTACCAACCCTTGATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR CAA 90 bp	TGGTGGCACTGGAAGGTCTTCTTTCTCAACACCTTAAAGCAAAGCTaGCTCACCCTGTGCTCAACACCCCGCCCTGTCCATACAGTCCTG	+
Preference number: 2 (lower is better) Translates to: WWHWKVFFLNTLKQS*LTLCSTPRPVHTVL Trigger: CAGGACTGTATGGACAGGGCGGGGTGTTGAGCACAGGGTGAGCAAGCTTTGCTTTAAGGTGTTGAGAAAGAAGACCTTCCAGTGCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR TCA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACGCAAGGCTTAGGCTGTaGAAAATCGAAAGTCCACAT	+
Preference number: 2 (lower is better) Translates to: VETCLSTKLDEYTGGSGDARLRL*KIESPH Trigger: ATGTGGACTTTCGATTTTTCACAGCCTAAGCCTTGC...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR TCA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACTTCACTTTCAGGTTTTaGGTTTCCTCAGAAGACACT	+
Preference number: 2 (lower is better) Translates to: VETCLSTKLDEYTGGSGDFTFRF*VSSEDT Trigger: AGTGTCTTCTGAGGAAACTCAAAACCTGAAAGTGAA...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR TCA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACAGTTATAAAACCCCATaGTCACAGTGTTCAGTTTGT	+
Preference number: 2 (lower is better) Translates to: VETCLSTKLDEYTGGSGDSYKTP*SQCSVC Trigger: ACAAACTGAACACTGTGATCATGGGGTTTTATAACT...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR TCA 90 bp	GCTGTTCTTGGTTGTCTCGACTGTAGTGTCCATGCAACTTCCCTGTGTTCTAAGATTAAGGGACCAGTCTaGGCTTTAGATACAAATACC	+
Preference number: 2 (lower is better) Translates to: AVLGCLDCSVHATSLCSKIKGPV*ALDTNT Trigger: GGTATTTGTATCTAAAGCTCAGACTGGTCCCTTAAT...CTTAGAACACAGGGAAGTTGCATGGACACTACAGTCGAGACAACCAAGAACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR CCA 90 bp	GTGGTGGCACTGGAAGGTCTTCTTTCTCAACACCTTAAAGCAAAGCTTGCTCACCAAAGGGACATAATGTaGAGGATACAAAGTGACACA	+
Preference number: 2 (lower is better) Translates to: VVALEGLLSQHLKAKLAHQRDIM*RIQSDT Trigger: TGTGTCACTTTGTATCCTCCACATTATGTCCCTTTG...GTGAGCAAGCTTTGCTTTAAGGTGTTGAGAAAGAAGACCTTCCAGTGCCACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR TCA 72 bp	CCCTGTGCTCAACACCCCGCCCTGTCCATACAGTCCTaGCTAATACAGGCTTCCAAAGAAAACCACCCAAGG	+
Preference number: 3 (lower is better) Translates to: PCAQHPALSIQS*LIQASKENHPR Trigger: CCTTGGGTGGTTTTCTTTGGAAGCCTGTATTAGTCAGGACTGTATGGACAGGGCGGGGTGTTGAGCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR GCA 72 bp	CCACCCTCCAAGCTAGAAGAACCCCAAGACTATGAGTaGTCCTCAGGCGAGAGGCCGCCTCAACACATTATT	+
Preference number: 3 (lower is better) Translates to: PPSKLEEPQDYE*SSGERPPQHII Trigger: AATAATGTGTTGAGGCGGCCTCTCGCCTGAGGAGCACTCATAGTCTTGGGGTTCTTCTAGCTTGGAGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR TCA 72 bp	GGGTTGGTAAGCCCTCAACCACAGGCAGAATTACTGTaGGTTACCAAACTCAGGATGCCGGTGGTCAGCATC	+
Preference number: 3 (lower is better) Translates to: GLVSPQPQAELL*VTKLRMPVVSI Trigger: GATGCTGACCACCGGCATCCTGAGTTTGGTAACTCACAGTAATTCTGCCTGTGGTTGAGGGCTTACCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR CAA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACCTGAATGATCAAGGGTaGGTAAGCCCTCAACCACAG	+
Preference number: 3 (lower is better) Translates to: VETCLSTKLDEYTGGSGDLNDQG*VSPQPQ Trigger: CTGTGGTTGAGGGCTTACCAACCCTTGATCATTCAG...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR CCA 72 bp	CAGAATTACTGTGAGTTACCAAACTCAGGATGCCGGTaGTCAGCATCTCACCAAGTCCCAGCATCACCACAG	+
Preference number: 3 (lower is better) Translates to: QNYCELPNSGCR*SASHQVPASPQ Trigger: CTGTGGTGATGCTGGGACTTGGTGAGATGCTGACCACCGGCATCCTGAGTTTGGTAACTCACAGTAATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR-3UTR CAA 90 bp	CAACACATTATTCTTAAAGAATCATCCAGAAAACTGGTCTGGCCATTTGTAAGATCCCAGGGACCATCTTaGCAAGGCTTAGGCTGTGAA	+
Preference number: 3 (lower is better) Translates to: QHIILKESSRKLVWPFVRSQGPS*QGLGCE Trigger: TTCACAGCCTAAGCCTTGCAAAGATGGTCCCTGGGA...TCTTACAAATGGCCAGACCAGTTTTCTGGATGATTCTTTAAGAATAATGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR CCA 72 bp	TTTTTGTTTTTGTTTATCGCACAAAGGGACATAATGTaGAGGATACAAAGTGACACAAACAGATCACAGAGC	+
Preference number: 3 (lower is better) Translates to: FLFLFIAQRDIM*RIQSDTNRSQS Trigger: GCTCTGTGATCTGTTTGTGTCACTTTGTATCCTCCACATTATGTCCCTTTGTGCGATAAACAAAAACAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR GCA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACGCTCCAGCACATCGTTaGAGATGTCCTGCAGCTCCG	+
Preference number: 4 (lower is better) Translates to: VETCLSTKLDEYTGGSGDAPAHR*RCPAAP Trigger: CGGAGCTGCAGGACATCTGCAACGATGTGCTGGAGC...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR GCA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACAATCGCCTCATCAAATaGCGTTTTGGCCAGGCTGCA	+
Preference number: 4 (lower is better) Translates to: VETCLSTKLDEYTGGSGDNRLIK*RFGQAA Trigger: TGCAGCCTGGCCAAAACGGCATTTGATGAGGCGATT...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
3UTR CAA 72 bp	TGGAAGGTCTTCTTTCTCAACACCTTAAAGCAAAGCTaGCTCACCCTGTGCTCAACACCCCGCCCTGTCCAT	+
Preference number: 4 (lower is better) Translates to: WKVFFLNTLKQS*LTLCSTPRPVH Trigger: ATGGACAGGGCGGGGTGTTGAGCACAGGGTGAGCAAGCTTTGCTTTAAGGTGTTGAGAAAGAAGACCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR TCA 90 bp	ATCGCACAAAGGGACATAATGTGGAGGATACAAAGTGACACAAACAGATCACAGGTTCGATGCTGGAGATaGCACGCCAGGAAGAGCGGC	+
Preference number: 4 (lower is better) Translates to: IAQRDIMWRIQSDTNRSQVRCWR*HARKSG Trigger: GCCGCTCTTCCTGGCGTGTCATCTCCAGCATCGAAC...CTGTGATCTGTTTGTGTCACTTTGTATCCTCCACATTATGTCCCTTTGTGCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR GCA 90 bp	GTGGTGGCACTGGAAGGTCTTCTTTCTCAACACCTTAAAGCAAAGCTTGCTCACTACGGCCTTCATAGCTaGAGCCATGTCATCATAGCG	+
Preference number: 4 (lower is better) Translates to: VVALEGLLSQHLKAKLAHYGLHS*SHVIIA Trigger: CGCTATGATGACATGGCTGCAGCTATGAAGGCCGTA...GTGAGCAAGCTTTGCTTTAAGGTGTTGAGAAAGAAGACCTTCCAGTGCCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR CCA 90 bp	GTTCTTGGTTGTCTCGACTGTAGTGTCCATGCAACTTCCCTGTGTTCTAAGGTCGATTCCTCTCTTCATTaGAGAGTTCGTGTCCCTGCT	+
Preference number: 4 (lower is better) Translates to: VLGCLDCSVHATSLCSKVDSSLH*RVRVPA Trigger: AGCAGGGACACGAACTCTCCAATGAAGAGAGGAATC...GACCTTAGAACACAGGGAAGTTGCATGGACACTACAGTCGAGACAACCAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR CCA 90 bp	ATGAGTGCTCCTCAGGCGAGAGGCCGCCTCAACACATTATTCTTAAAGAATCATGGGAGTTGGACACCGTaGTTTGTTTATTTTCTCCGG	+
Preference number: 4 (lower is better) Translates to: MSAPQARGRLNTLFLKNHGSWTP*FVYFLR Trigger: CCGGAGAAAATAAACAAACCACGGTGTCCAACTCCC...ATGATTCTTTAAGAATAATGTGTTGAGGCGGCCTCTCGCCTGAGGAGCACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR CCA 90 bp	ATCGCACAAAGGGACATAATGTGGAGGATACAAAGTGACACAAACAGATCACAGACTTTGCTTTCTGCCTaGGTGGCATTGAGAATGAGA	+
Preference number: 4 (lower is better) Translates to: IAQRDIMWRIQSDTNRSQTLLSA*VALRMR Trigger: TCTCATTCTCAATGCCACCCAGGCAGAAAGCAAAGT...CTGTGATCTGTTTGTGTCACTTTGTATCCTCCACATTATGTCCCTTTGTGCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR GCA 90 bp	ATCGCACAAAGGGACATAATGTGGAGGATACAAAGTGACACAAACAGATCACAGTTAAGTAGAACACTTTaGTTTCTGCCTGGGTGGCAT	+
Preference number: 4 (lower is better) Translates to: IAQRDIMWRIQSDTNRSQLSRTL*FLPGWH Trigger: ATGCCACCCAGGCAGAAAGCAAAGTGTTCTACTTAA...CTGTGATCTGTTTGTGTCACTTTGTATCCTCCACATTATGTCCCTTTGTGCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR GCA 90 bp	ATCGCACAAAGGGACATAATGTGGAGGATACAAAGTGACACAAACAGATCACAGTTTATTTTCTCCGGATaGAACTTCAGAAAGATACCT	+
Preference number: 4 (lower is better) Translates to: IAQRDIMWRIQSDTNRSQFIFSG*NFRKIP Trigger: AGGTATCTTTCTGAAGTTGCATCCGGAGAAAATAAA...CTGTGATCTGTTTGTGTCACTTTGTATCCTCCACATTATGTCCCTTTGTGCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR CAA 90 bp	GTTGAGACGTGTCTGAGCACGAAGCTAGATGAGTACACTGGAGGGTCTGGTGACGTTGGACACCGTGGTTaGTTTATTTTCTCCGGATGC	+
Preference number: 5 (lower is better) Translates to: VETCLSTKLDEYTGGSGDVGHRG*FIFSGC Trigger: GCATCCGGAGAAAATAAACAAACCACGGTGTCCAAC...GTCACCAGACCCTCCAGTGTACTCATCTAGCTTCGTGCTCAGACACGTCTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018470.10
CDS-3UTR CAA 90 bp	GTTCTTGGTTGTCTCGACTGTAGTGTCCATGCAACTTCCCTGTGTTCTAAGGTCTCTGCCTGGGTGGCATaGAGAATGAGATATTTGTCC	+
Preference number: 5 (lower is better) Translates to: VLGCLDCSVHATSLCSKVSAWVA*RMRYLS Trigger: GGACAAATATCTCATTCTCAATGCCACCCAGGCAGA...GACCTTAGAACACAGGGAAGTTGCATGGACACTACAGTCGAGACAACCAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018470.10