Pregenerated sensors for YTHDF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047213Ensembl transcript IDs: ENSMUST00000108345.9, ENSMUST00000108346.5, ENSMUST00000191774.6
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTaGGAGAATAAGGGCAGATGCGCTGATGAAAACCATTACAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: GHKVLHEVTVLKCVW*ENKGRCADENHYKK Trigger: CTTCTTGTAATGGTTTTCATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| 3UTR-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGAACATTGCTGTGCTaGCTATACCCAAATGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGRTLLC*LYPNAN Trigger: GTTGGCATTTGGGTATAGTCAGCACAGCAATGTTCT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCACACAAAGTGCTTCATaGAGTTACAGTTCTCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGTQSAS*SYSSQV Trigger: CACTTGAGAACTGTAACTTCATGAAGCACTTTGTGT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGCTCCAGAATGACATaGGTCATCTTTAAAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGSSRMT*VIFKMS Trigger: GGACATTTTAAAGATGACTCATGTCATTCTGGAGCT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTCAGCTGAGATTCACTaGCCCTGTCTGAGTCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNSAEIH*PCLSLL Trigger: CAGTAGACTCAGACAGGGCCAGTGAATCTCAGCTGA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCAGTGTACATGTAACTaGAGAGGAGGGGATGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNQCTCN*RGGDVH Trigger: ATGCACATCCCCTCCTCTCCAGTTACATGTACACTG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCCCTTCAGTAAACACTaGTATAACTACACTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNPFSKH*YNYTGT Trigger: AGTCCCAGTGTAGTTATATCAGTGTTTACTGAAGGG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGAGAATAAGGGCAGATaGGCTGATGAAAACCATTAC | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNENKGR*ADENHY Trigger: GTAATGGTTTTCATCAGCGCATCTGCCCTTATTCTC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAAGCTGGAGAAGAGTTaGGAAACAGTATATGCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNKLEKS*ETVYAY Trigger: GTAAGCATATACTGTTTCTCAACTCTTCTCCAGCTT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGAGAATAAGGGCAGATaGGCTGATGAAAACCATTAC | + |
|
Preference number: 2 (lower is better) Translates to: KASGHKVLHEVTVLKCVWENKGR*ADENHY Trigger: GTAATGGTTTTCATCAGCGCATCTGCCCTTATTCTC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAAGGATACAGAACATTaGTGTGCTGACTATACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VPAVKKHSVGCTLETTGNKDTEH*CADYTQ Trigger: TTGGGTATAGTCAGCACAGCAATGTTCTGTATCCTT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR CCA 72 bp | CTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTaGCCCTGTCTGAGTCTACTGCAATCAGCCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFTTNRLSAEIH*PCLSLLQSACS Trigger: TGAGCAGGCTGATTGCAGTAGACTCAGACAGGGCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR TCA 72 bp | CGAATAGACTCTCAGCTGAGATTCACTGGCCCTGTCTaGGTCTACTGCAATCAGCCTGCTCATTGGGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: RIDSQLRFTGPV*VYCNQPAHWVF Trigger: AAATACCCAATGAGCAGGCTGATTGCAGTAGACTCAGACAGGGCCAGTGAATCTCAGCTGAGAGTCTATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| 3UTR TCA 72 bp | GTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTaGGAGAATAAGGGCAGATGCGCTGATGAAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLHEVTVLKCVW*ENKGRCADENH Trigger: ATGGTTTTCATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTTCATGAAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| 3UTR TCA 72 bp | GGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATaGAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGKSFRTQSAS*SYSSQVCLVRE Trigger: TTCTCTCACCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAAAGCTGGAGAAGAGTaGAGAAACAGTATATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VPAVKKHSVGCTLETTGNKAGEE*RNSICL Trigger: TAAGCATATACTGTTTCTCAACTCTTCTCCAGCTTT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCGTGAGGCTGGGCCTGTaGCTGAGGTCCTTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGVRLGL*LRSLLL Trigger: CAGCAACAAGGACCTCAGCCACAGGCCCAGCCTCAC...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGTTGGTTTAGGTGCTaGACTGCTAACAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGSWFRC*TANRGH Trigger: GTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTTGAGGAGGCAGAACTaGTTGGGTTGGTGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGLRRQN*LGWWSL Trigger: AAGGCTCCACCAACCCAACCAGTTCTGCCTCCTCAA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTTCCATTGTTCTGGTTaGAGCCGGTTCCCCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGFHCSG*SRFPYS Trigger: GGAATAGGGGAACCGGCTTCAACCAGAACAATGGAA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGAAGTTGGTTTAGGTaGTGCACTGCTAACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGRSWFR*CTANRG Trigger: CCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCCTGTTCCATTGTTCTaGTTGAAGCCGGTTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGPVPLF*LKPVPL Trigger: TAGGGGAACCGGCTTCAACCAGAACAATGGAACAGG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGGCTGATCTCCAGCCGTaGACCATGCTGCTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMADLQP*TMLLPQ Trigger: TTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGC...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCCCAAGAGAACTAGGTaGATAGCCGTAACTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGPKRTR*IAVTAT Trigger: AGTAGCAGTTACGGCTATCCACCTAGTTCTCTTGGG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGTGAGGCTGGGCCTGTaGCTGAGGTCCTTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLVRLGL*LRSLLL Trigger: CAGCAACAAGGACCTCAGCCACAGGCCCAGCCTCAC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTGCCCTTTAGGTCTCTaGTCCACGCTAGTGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMCPLGL*STLVAD Trigger: GTCAGCCACTAGCGTGGATCAGAGACCTAAAGGGCA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTCTAGGGGTACTTCTTaGGTGTCCCTTGAATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGSRGTS*VSLELV Trigger: AACCAATTCAAGGGACACTCAAGAAGTACCCCTAGA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTTTTCCAGCACTGGATaGACCTCTACACTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGFSSTG*TSTLEG Trigger: ACCTTCTAGTGTAGAGGTGCATCCAGTGCTGGAAAA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCAGGGAACGATAAGCTaGATCCAAACGCTTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGQGTIS*IQTLIT Trigger: GGTAATAAGCGTTTGGATGCAGCTTATCGTTCCCTG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGCTGATCTCCAGCCGTaGACCATGCTGCTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLADLQP*TMLLPQ Trigger: TTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGCTGATCTCCAGCCGTaGACCATGCTGCTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNADLQP*TMLLPQ Trigger: TTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGGGAGGCAGAACTGGTTaGGTTGGTGGAGCCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMGGRTG*VGGAFT Trigger: GGTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCC...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGGCATATATGGATCTaGCATTGGTGGATAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGRHIWI*HWWIAV Trigger: AACAGCTATCCACCAATGTCAGATCCATATATGCCT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGAGATATGGCATAGGCTaGTCTCCAGCCGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMRYGIG*SPAVDH Trigger: ATGGTCCACGGCTGGAGATCAGCCTATGCCATATCT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTCCAGCCGTGGACCATaGTGCTTCCCCAAGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMSSRGP*CFPKRI Trigger: TATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTACTCAAAGTATCATTaGCAAATCCGGCCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGYSKYH*QIRPVH Trigger: ATGGACAGGCCGGATTTGGCAATGATACTTTGAGTA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGGTGTTTTATAGGAGGTaGTGGCACAGCAGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMVFYRR*WHSRTP Trigger: GGGGGTTCTGCTGTGCCACCACCTCCTATAAAACAC...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGGAGGCAGAACTGGTTaGGTTGGTGGAGCCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNGGRTG*VGGAFT Trigger: GGTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAGCCGTGGACCATGCTaGTTCCCCAAGAGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSRGPC*FPKRIW Trigger: CCATATTCTCTTGGGGAAGCAGCATGGTCCACGGCT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTCCAGCCGTGGACCATaGTGCTTCCCCAAGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNSSRGP*CFPKRI Trigger: TATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAGTTGGTTTAGGTGCTaGACTGCTAACAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSWFRC*TANRGH Trigger: GTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAACCAAAGTTTTCACTaGCTGTTCCATTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGNQSFH*LFHCSG Trigger: ACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGTGTTTTATAGGAGGTaGTGGCACAGCAGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLVFYRR*WHSRTP Trigger: GGGGGTTCTGCTGTGCCACCACCTCCTATAAAACAC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGGAGGCAGAACTGGTTaGGTTGGTGGAGCCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWGGRTG*VGGAFT Trigger: GGTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTTGAGGAGGCAGAACTaGTTGGGTTGGTGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLLRRQN*LGWWSL Trigger: AAGGCTCCACCAACCCAACCAGTTCTGCCTCCTCAA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGATATGGCATAGGCTaGTCTCCAGCCGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWRYGIG*SPAVDH Trigger: ATGGTCCACGGCTGGAGATCAGCCTATGCCATATCT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCCTAATGCCCCTGGTTaGCTAAAAACACCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMPNAPG*LKTPSG Trigger: ACCAGATGGTGTTTTTAGTCAACCAGGGGCATTAGG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTGGAGCCTTTACCACTaGCCCCTTTTCATCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLWSLYH*PLFIPS Trigger: ACTTGGGATGAAAAGGGGTCAGTGGTAAAGGCTCCA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTTCCATTGTTCTGGTTaGAGCCGGTTCCCCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNFHCSG*SRFPYS Trigger: GGAATAGGGGAACCGGCTTCAACCAGAACAATGGAA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCACTGCCATTCACACTaGAGAGTAAATAGAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMHCHSH*RVNRVG Trigger: GCCCACTCTATTTACTCTTCAGTGTGAATGGCAGTG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGCCGTGGACCATGCTaGTTCCCCAAGAGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWSRGPC*FPKRIW Trigger: CCATATTCTCTTGGGGAAGCAGCATGGTCCACGGCT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTCCAGCCGTGGACCATaGTGCTTCCCCAAGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWSSRGP*CFPKRI Trigger: TATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAAACGCTTATTACCATaGTCAGTACTACACCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGKRLLP*SVLHQI Trigger: TATCTGGTGTAGTACTGAGCATGGTAATAAGCGTTT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAGCAGCCCAAGAAGTTaGTTTAGGTGCTGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNSSPRS*FRCCTA Trigger: AGCAGTGCAGCACCTAAACCAACTTCTTGGGCTGCT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAGCAGCCCAAGAAGTTaGTTTAGGTGCTGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSSPRS*FRCCTA Trigger: AGCAGTGCAGCACCTAAACCAACTTCTTGGGCTGCT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGACGATTCTGCAACTGTaGCTGTTGAGACTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMTILQL*LLRLHL Trigger: CAAGTGCAGTCTCAACAGCCACAGTTGCAGAATCGT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCCTAATGCCCCTGGTTaGCTAAAAACACCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNPNAPG*LKTPSG Trigger: ACCAGATGGTGTTTTTAGTCAACCAGGGGCATTAGG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTGTGTTGATTGTCCCTaGGATCCACTTGTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNCVDCP*DPLVPH Trigger: ATGGGGAACAAGTGGATCTCAGGGACAATCAACACA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTGGAGCCTTTACCACTaGCCCCTTTTCATCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWWSLYH*PLFIPS Trigger: ACTTGGGATGAAAAGGGGTCAGTGGTAAAGGCTCCA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTTCCATTGTTCTGGTTaGAGCCGGTTCCCCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWFHCSG*SRFPYS Trigger: GGAATAGGGGAACCGGCTTCAACCAGAACAATGGAA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCCACTGCCATTCACACTaGAGAGTAAATAGAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLHCHSH*RVNRVG Trigger: GCCCACTCTATTTACTCTTCAGTGTGAATGGCAGTG...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGAAGTTGGTTTAGGTaGTGCACTGCTAACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWRSWFR*CTANRG Trigger: CCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGGCCTGTTTCCTCTGTTaGCCTATGAAGCAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMACFLC*PMKQSQ Trigger: TTGACTTTGCTTCATAGGGCAACAGAGGAAACAGGC...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCCCCAAGAGAACTAGGTaGATAGCCGTAACTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLPKRTR*IAVTAT Trigger: AGTAGCAGTTACGGCTATCCACCTAGTTCTCTTGGG...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATACGATTCTGCAACTGTaGCTGTTGAGACTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNTILQL*LLRLHL Trigger: CAAGTGCAGTCTCAACAGCCACAGTTGCAGAATCGT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCACGATTCTGCAACTGTaGCTGTTGAGACTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLTILQL*LLRLHL Trigger: CAAGTGCAGTCTCAACAGCCACAGTTGCAGAATCGT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCCTGTTCCATTGTTCTaGTTGAAGCCGGTTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWPVPLF*LKPVPL Trigger: TAGGGGAACCGGCTTCAACCAGAACAATGGAACAGG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCGAATATGTCGTAATTaGTTATTGGGAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGRICRN*LLGTSL Trigger: CAAAGATGTTCCCAATAACCAATTACGACATATTCG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGAGGCATATATGGATCTaGCATTGGTGGATAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMRHIWI*HWWIAV Trigger: AACAGCTATCCACCAATGTCAGATCCATATATGCCT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCCTAATGCCCCTGGTTaGCTAAAAACACCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWPNAPG*LKTPSG Trigger: ACCAGATGGTGTTTTTAGTCAACCAGGGGCATTAGG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTGTGTTGATTGTCCCTaGGATCCACTTGTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWCVDCP*DPLVPH Trigger: ATGGGGAACAAGTGGATCTCAGGGACAATCAACACA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCACTGCCATTCACACTaGAGAGTAAATAGAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWHCHSH*RVNRVG Trigger: GCCCACTCTATTTACTCTTCAGTGTGAATGGCAGTG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTCTAGGGGTACTTCTTaGGTGTCCCTTGAATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSRGTS*VSLELV Trigger: AACCAATTCAAGGGACACTCAAGAAGTACCCCTAGA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTACTCAAAGTATCATTaGCAAATCCGGCCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMYSKYH*QIRPVH Trigger: ATGGACAGGCCGGATTTGGCAATGATACTTTGAGTA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGAGTCCAGTCATGCCTTaGTCAATACTACTAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMSPVMP*SILLMP Trigger: TGGCATTAGTAGTATTGAGCAAGGCATGACTGGACT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTTTTCCAGCACTGGATaGACCTCTACACTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLFSSTG*TSTLEG Trigger: ACCTTCTAGTGTAGAGGTGCATCCAGTGCTGGAAAA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTTCCCCAAGAGAATATaGAAATCCAATGGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLFPKRI*KSNGRS Trigger: GCTCCGTCCATTGGATTTCCATATTCTCTTGGGGAA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGAAGTTAAATCCATGTTaGCCAAGAAATGGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMKLNPC*PRNGGV Trigger: TACCCCTCCATTTCTTGGTCAACATGGATTTAACTT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAGCAGAATTTTGTGTTaGTTGTCCCTGAGATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNSRILC*LSLRST Trigger: AGTGGATCTCAGGGACAATCAACACAAAATTCTGCT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTCCTCTGTTGCCCTATaGAGCAAAGTCAAATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSSVAL*SKVKSR Trigger: TCTTGATTTGACTTTGCTTCATAGGGCAACAGAGGA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTACTCAAAGTATCATTaGCAAATCCGGCCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLYSKYH*QIRPVH Trigger: ATGGACAGGCCGGATTTGGCAATGATACTTTGAGTA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGGGCACATTATTGGTTaGAATGCTAGTCATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNGHIIG*NASHTT Trigger: AGTGGTATGACTAGCATTGCAACCAATAATGTGCCC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGGGCACATTATTGGTTaGAATGCTAGTCATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLGHIIG*NASHTT Trigger: AGTGGTATGACTAGCATTGCAACCAATAATGTGCCC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTTTTCCAGCACTGGATaGACCTCTACACTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWFSSTG*TSTLEG Trigger: ACCTTCTAGTGTAGAGGTGCATCCAGTGCTGGAAAA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCAGGGAACGATAAGCTaGATCCAAACGCTTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWQGTIS*IQTLIT Trigger: GGTAATAAGCGTTTGGATGCAGCTTATCGTTCCCTG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTTCCCCAAGAGAATATaGAAATCCAATGGACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWFPKRI*KSNGRS Trigger: GCTCCGTCCATTGGATTTCCATATTCTCTTGGGGAA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGCTCTCCTATATTTCTaGTTTGTCTGGCTACTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNALLYF*FVWLLK Trigger: CTTAAGTAGCCAGACAAATCAGAAATATAGGAGAGC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAAGTTAAATCCATGTTaGCCAAGAAATGGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNKLNPC*PRNGGV Trigger: TACCCCTCCATTTCTTGGTCAACATGGATTTAACTT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGCAGAATTTTGTGTTaGTTGTCCCTGAGATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWSRILC*LSLRST Trigger: AGTGGATCTCAGGGACAATCAACACAAAATTCTGCT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGTCCAGTCATGCCTTaGTCAATACTACTAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWSPVMP*SILLMP Trigger: TGGCATTAGTAGTATTGAGCAAGGCATGACTGGACT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGGGCACATTATTGGTTaGAATGCTAGTCATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWGHIIG*NASHTT Trigger: AGTGGTATGACTAGCATTGCAACCAATAATGTGCCC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAACCAAAGTTTTCACTaGCTGTTCCATTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLNQSFH*LFHCSG Trigger: ACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGAAACGCTTATTACCATaGTCAGTACTACACCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KLQFSSVFGERIRADALMKRLLP*SVLHQI Trigger: TATCTGGTGTAGTACTGAGCATGGTAATAAGCGTTT...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGAGTGTCCCTTGAATTaGTTACTGGTTTGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNECPLN*LLVCCH Trigger: ATGACAACAAACCAGTAACCAATTCAAGGGACACTC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGAGTGTCCCTTGAATTaGTTACTGGTTTGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLECPLN*LLVCCH Trigger: ATGACAACAAACCAGTAACCAATTCAAGGGACACTC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCGAACCATTTTGTACTaGAACTTTATTTCCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWRTILY*NFISLP Trigger: GGGCAAGGAAATAAAGTTTCAGTACAAAATGGTTCG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAAGTTAAATCCATGTTaGCCAAGAAATGGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWKLNPC*PRNGGV Trigger: TACCCCTCCATTTCTTGGTCAACATGGATTTAACTT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGTGGATAGCCGTAACTaGTACTATAAGCAGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNVDSRN*YYKQNF Trigger: AAAATTCTGCTTATAGTAGCAGTTACGGCTATCCAC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAACCAAAGTTTTCACTaGCTGTTCCATTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWNQSFH*LFHCSG Trigger: ACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGTGGATAGCCGTAACTaGTACTATAAGCAGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWVDSRN*YYKQNF Trigger: AAAATTCTGCTTATAGTAGCAGTTACGGCTATCCAC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATAAGATTGAGGTGGTATaGTTGAAAGTAGCGATTATT | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNKIEVV*LKVAII Trigger: AATAATCGCTACTTTCAAGCATACCACCTCAATCTT...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGATTGAGGTGGTATaGTTGAAAGTAGCGATTATT | + |
|
Preference number: 4 (lower is better) Translates to: QVLVKASGHKVLHEVTVLKIEVV*LKVAII Trigger: AATAATCGCTACTTTCAAGCATACCACCTCAATCTT...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCGAATATGTCGTAATTaGTTATTGGGAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPAVKKHSVGCTLETTGNRICRN*LLGTSL Trigger: CAAAGATGTTCCCAATAACCAATTACGACATATTCG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAAGATTGAGGTGGTATaGTTGAAAGTAGCGATTATT | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWKIEVV*LKVAII Trigger: AATAATCGCTACTTTCAAGCATACCACCTCAATCTT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCGAATATGTCGTAATTaGTTATTGGGAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KASGHKVLHEVTVLKCVWRICRN*LLGTSL Trigger: CAAAGATGTTCCCAATAACCAATTACGACATATTCG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCGCAGAACTGGTTGGGTaGGTGGAGCCTTTACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGAELVG*VEPLPL Trigger: CAGTGGTAAAGGCTCCACCAACCCAACCAGTTCTGC...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAGGAGGCAGAACTGGTaGGGTTGGTGGAGCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGRRQNW*GWWSLY Trigger: GTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCCT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCTGCAACTGTGGCTGTaGAGACTGCACTTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGLQLWL*RLHLVR Trigger: CCTCACCAAGTGCAGTCTCAACAGCCACAGTTGCAG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCGGCTTCCTCCTCCTCTaGACGCTTTTCATAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGGFLLL*TLFIMC Trigger: GCACATTATGAAAAGCGTCAAGAGGAGGAGGAAGCC...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS GCA 90 bp | GGTTGTCAGATATGGCATAGGCTGATCTCCAGCCGTGGACCATGCTaGTTCCCCAAGAGAATATGGAAATCCAATGGACGGAGCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GCQIWHRLISSRGPC*FPKRIWKSNGRSIV Trigger: TACTATGCTCCGTCCATTGGATTTCCATATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGCCTATGCCATATCTGACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 90 bp | CCCAATTCCCACATTGCCCTTGGGTTTAAGTTTCGGCTGAGGTTTTaGAGGCTTTCTGGCAATAGCAGCCCAAGAAGTTGGTTTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNSHIALGFKFRLRF*RLSGNSSPRSWFRC Trigger: GCACCTAAACCAACTTCTTGGGCTGCTATTGCCAGAAAGCCTGCAAAACCTCAGCCGAAACTTAAACCCAAGGGCAATGTGGGAATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CCA 90 bp | GGCACAACACCTAAACCAAAGTTTTCACTGCCTGTTCCATTGTTCTaGTTGAAGCCGGTTCCCCTATTCCGAGGAGCTACCCAACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GTTPKPKFSLPVPLF*LKPVPLFRGATQRF Trigger: GAATCGTTGGGTAGCTCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTTTAGGTGTTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCCAGTCCAGTCATGCCTaGCTCAATACTACTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGQSSHA*LNTTNA Trigger: GGCATTAGTAGTATTGAGCAAGGCATGACTGGACTG...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS TCA 90 bp | CAACACCTAAACCAAAGTTTTCACTGCCTGTTCCATTGTTCTGGTTaGAGCCGGTTCCCCTATTCCGAGGAGCTACCCAACGATTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHLNQSFHCLFHCSG*SRFPYSEELPNDSA Trigger: TGCAGAATCGTTGGGTAGCTCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTTTAGGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 90 bp | AGTTGGTTTAGGTGCTGCACTGCTAACAGGGGGCACATTATTGGTTaGAATGCTAGTCATACCACTGCTGCTCAAGGCTGTACCTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SWFRCCTANRGHIIG*NASHTTAAQGCTYS Trigger: ACTGTAGGTACAGCCTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 90 bp | TGCAGGCTTTCTGGCAATAGCAGCCCAAGAAGTTGGTTTAGGTGCTaGACTGCTAACAGGGGGCACATTATTGGTTGCAATGCTAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CRLSGNSSPRSWFRC*TANRGHIIGCNASH Trigger: ATGACTAGCATTGCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCTTGGGCTGCTATTGCCAGAAAGCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CCA 90 bp | AGGCTGATCTCCAGCCGTGGACCATGCTGCTTCCCCAAGAGAATATaGAAATCCAATGGACGGAGCATAGTAACTAGGCATATATGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RLISSRGPCCFPKRI*KSNGRSIVTRHIWI Trigger: GATCCATATATGCCTAGTTACTATGCTCCGTCCATTGGATTTCCATATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTTACTCAAAGTATCATaGCCAAATCCGGCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGLLKVS*PNPACP Trigger: TGGACAGGCCGGATTTGGCAATGATACTTTGAGTAA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCACAGGGGGCACATTATaGGTTGCAATGCTAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGTGGTL*VAMLVI Trigger: TATGACTAGCATTGCAACCAATAATGTGCCCCCTGT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCTGCTGTTGAGGCAGTaGGCTTTGCACCAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMLLLRQ*ALHQWW Trigger: CCACCATTGGTGCAAAGCCAACTGCCTCAACAGCAG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCAAGCAGAATTTTGTGTaGATTGTCCCTGAGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGKQNFV*IVPEIH Trigger: GTGGATCTCAGGGACAATCAACACAAAATTCTGCTT...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGCAGAACTGGTTGGGTaGGTGGAGCCTTTACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLAELVG*VEPLPL Trigger: CAGTGGTAAAGGCTCCACCAACCCAACCAGTTCTGC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCTGCAACTGTGGCTGTaGAGACTGCACTTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNLQLWL*RLHLVR Trigger: CCTCACCAAGTGCAGTCTCAACAGCCACAGTTGCAG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS GCA 90 bp | ACCGCAGCTGTCAGGTCACCACCAATTTTCAGTCCAGTCATGCCTTaGTCAATACTACTAATGCCAGGCACCTTACTCAAAGTATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TAAVRSPPIFSPVMP*SILLMPGTLLKVSL Trigger: CAATGATACTTTGAGTAAGGTGCCTGGCATTAGTAGTATTGAGCAAGGCATGACTGGACTGAAAATTGGTGGTGACCTGACAGCTGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCCCCCAATTCCCACATaGCCCTTGGGTTTAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMPPIPT*PLGLSF Trigger: GAAACTTAAACCCAAGGGCAATGTGGGAATTGGGGG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGCAGAACTGGTTGGGTaGGTGGAGCCTTTACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWAELVG*VEPLPL Trigger: CAGTGGTAAAGGCTCCACCAACCCAACCAGTTCTGC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGAGGAGGCAGAACTGGTaGGGTTGGTGGAGCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWRRQNW*GWWSLY Trigger: GTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCCT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCTGCTGTTGAGGCAGTaGGCTTTGCACCAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWLLLRQ*ALHQWW Trigger: CCACCATTGGTGCAAAGCCAACTGCCTCAACAGCAG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCTGCAACTGTGGCTGTaGAGACTGCACTTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWLQLWL*RLHLVR Trigger: CCTCACCAAGTGCAGTCTCAACAGCCACAGTTGCAG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCGCCTGTTTCCTCTGTaGCCCTATGAAGCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMRLFPL*PYEAKS Trigger: TGACTTTGCTTCATAGGGCAACAGAGGAAACAGGCG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTATATGGATCTGACATaGGTGGATAGCTGTTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGYMDLT*VDSCYY Trigger: GTAATAACAGCTATCCACCAATGTCAGATCCATATA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTTCTCCATTACTCATTaGTCCATAGGTTGTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGFSITH*SIGCQI Trigger: TATCTGACAACCTATGGACAAATGAGTAATGGAGAA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCCCCCAATTCCCACATaGCCCTTGGGTTTAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNPPIPT*PLGLSF Trigger: GAAACTTAAACCCAAGGGCAATGTGGGAATTGGGGG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGTTCCATTGTTCTGGTaGAAGCCGGTTCCCCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLVPLFW*KPVPLF Trigger: GAATAGGGGAACCGGCTTCAACCAGAACAATGGAAC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTCACTGCCTGTTCCATaGTTCTGGTTGAAGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLSLPVP*FWLKPV Trigger: AACCGGCTTCAACCAGAACAATGGAACAGGCAGTGA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTCACTGCCTGTTCCATaGTTCTGGTTGAAGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNSLPVP*FWLKPV Trigger: AACCGGCTTCAACCAGAACAATGGAACAGGCAGTGA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGGATGTTCTCTTCACCACGAATAGACTCTCAGCTGAGATTCACTGGCTGTCGTAATTGGTTATaGGGAACATCTTTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTGMFSSPRIDSQLRFTGCRNWL*GTSLTK Trigger: CTTTGTCAAAGATGTTCCCAATAACCAATTACGACA...GCCAGTGAATCTCAGCTGAGAGTCTATTCGTGGTGAAGAGAACATCCCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGGCTTCCTCCTCCTCTaGACGCTTTTCATAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLGFLLL*TLFIMC Trigger: GCACATTATGAAAAGCGTCAAGAGGAGGAGGAAGCC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTTACTCAAAGTATCATaGCCAAATCCGGCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMLLKVS*PNPACP Trigger: TGGACAGGCCGGATTTGGCAATGATACTTTGAGTAA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCAGTCCAGTCATGCCTaGCTCAATACTACTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNQSSHA*LNTTNA Trigger: GGCATTAGTAGTATTGAGCAAGGCATGACTGGACTG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTCACTGCCTGTTCCATaGTTCTGGTTGAAGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWSLPVP*FWLKPV Trigger: AACCGGCTTCAACCAGAACAATGGAACAGGCAGTGA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATTTACTCAAAGTATCATaGCCAAATCCGGCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNLLKVS*PNPACP Trigger: TGGACAGGCCGGATTTGGCAATGATACTTTGAGTAA...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGCAGTCCAGTCATGCCTaGCTCAATACTACTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWQSSHA*LNTTNA Trigger: GGCATTAGTAGTATTGAGCAAGGCATGACTGGACTG...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGACAGGGGGCACATTATaGGTTGCAATGCTAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWTGGTL*VAMLVI Trigger: TATGACTAGCATTGCAACCAATAATGTGCCCCCTGT...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGCACCAGATAGAGTACTaGATGGAACGATGTATATCA | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMHQIEY*MERCIS Trigger: TGATATACATCGTTCCATCAAGTACTCTATCTGGTG...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTTCTCCATTACTCATTaGTCCATAGGTTGTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMFSITH*SIGCQI Trigger: TATCTGACAACCTATGGACAAATGAGTAATGGAGAA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATCACCAGATAGAGTACTaGATGGAACGATGTATATCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNHQIEY*MERCIS Trigger: TGATATACATCGTTCCATCAAGTACTCTATCTGGTG...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGTTCTCAAGTGTGTTTGGTGAGAGAATAAGGGCAGATGCGCTGATGTGTCGTAATTGGTTATaGGGAACATCTTTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLQFSSVFGERIRADALMCRNWL*GTSLTK Trigger: CTTTGTCAAAGATGTTCCCAATAACCAATTACGACA...CATCAGCGCATCTGCCCTTATTCTCTCACCAAACACACTTGAGAACTGTAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCGTTCCAATATTCATGTaGTGTTTTATAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLVPIFM*CFIGGG Trigger: ACCACCTCCTATAAAACACAACATGAATATTGGAAC...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCCGCAGTTAAGAAACATTCTGTTGGTTGTACTTTAGAGACAACCGGTAATGTTCCAATATTCATGTaGTGTTTTATAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPAVKKHSVGCTLETTGNVPIFM*CFIGGG Trigger: ACCACCTCCTATAAAACACAACATGAATATTGGAAC...ATTACCGGTTGTCTCTAAAGTACAACCAACAGAATGTTTCTTAACTGCGGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTACTGGTAAAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCTATATGGATCTGACATaGGTGGATAGCTGTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QVLVKASGHKVLHEVTVLYMDLT*VDSCYS Trigger: AGAATAACAGCTATCCACCAATGTCAGATCCATATA...GAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTTTACCAGTACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108345.9 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGTTCTCCATTACTCATTaGTCCATAGGTTGTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWFSITH*SIGCQI Trigger: TATCTGACAACCTATGGACAAATGAGTAATGGAGAA...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCAGGACACAAAGTGCTTCATGAAGTTACAGTTCTCAAGTGTGTTTGGGTTCCAATATTCATGTaGTGTTTTATAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KASGHKVLHEVTVLKCVWVPIFM*CFIGGG Trigger: ACCACCTCCTATAAAACACAACATGAATATTGGAAC...CCAAACACACTTGAGAACTGTAACTTCATGAAGCACTTTGTGTCCTGAAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS TCA 72 bp | AACCAAAGTTTTCACTGCCTGTTCCATTGTTCTGGTTaGAGCCGGTTCCCCTATTCCGAGGAGCTACCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NQSFHCLFHCSG*SRFPYSEELPN Trigger: GTTGGGTAGCTCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 72 bp | CAGATATGGCATAGGCTGATCTCCAGCCGTGGACCATaGTGCTTCCCCAAGAGAATATGGAAATCCAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QIWHRLISSRGP*CFPKRIWKSNG Trigger: TCCATTGGATTTCCATATTCTCTTGGGGAAGCAGCATGGTCCACGGCTGGAGATCAGCCTATGCCATATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 72 bp | CTTTCTGGCAATAGCAGCCCAAGAAGTTGGTTTAGGTaGTGCACTGCTAACAGGGGGCACATTATTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGNSSPRSWFR*CTANRGHIIGC Trigger: GCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCTTGGGCTGCTATTGCCAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 72 bp | CACATTGCCCTTGGGTTTAAGTTTCGGCTGAGGTTTTaGAGGCTTTCTGGCAATAGCAGCCCAAGAAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HIALGFKFRLRF*RLSGNSSPRSW Trigger: CCAACTTCTTGGGCTGCTATTGCCAGAAAGCCTGCAAAACCTCAGCCGAAACTTAAACCCAAGGGCAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CCA 72 bp | CCTAAACCAAAGTTTTCACTGCCTGTTCCATTGTTCTaGTTGAAGCCGGTTCCCCTATTCCGAGGAGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: PKPKFSLPVPLF*LKPVPLFRGAT Trigger: GGTAGCTCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 72 bp | GGTTTAGGTGCTGCACTGCTAACAGGGGGCACATTATaGGTTGCAATGCTAGTCATACCACTGCTGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLGAALLTGGTL*VAMLVIPLLLK Trigger: CTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 90 bp | CAAGAAGTTGGTTTAGGTGCTGCACTGCTAACAGGGGGCACATTATaGGTTGCAATGCTAGTCATACCACTGCTGCTCAAGGCTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: QEVGLGAALLTGGTL*VAMLVIPLLLKAVP Trigger: AGGTACAGCCTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 90 bp | CTAACAGGCACAACACCTAAACCAAAGTTTTCACTGCCTGTTCCATaGTTCTGGTTGAAGCCGGTTCCCCTATTCCGAGGAGCTACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LTGTTPKPKFSLPVP*FWLKPVPLFRGATQ Trigger: TTGGGTAGCTCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTTTAGGTGTTGTGCCTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 72 bp | TCTGGCAATAGCAGCCCAAGAAGTTGGTTTAGGTGCTaGACTGCTAACAGGGGGCACATTATTGGTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SGNSSPRSWFRC*TANRGHIIGCN Trigger: ATTGCAACCAATAATGTGCCCCCTGTTAGCAGTGCAGCACCTAAACCAACTTCTTGGGCTGCTATTGCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 90 bp | CACCGCAGCTGTCAGGTCACCACCAATTTTCAGTCCAGTCATGCCTaGCTCAATACTACTAATGCCAGGCACCTTACTCAAAGTATCATT | + |
|
Preference number: 6 (lower is better) Translates to: HRSCQVTTNFQSSHA*LNTTNARHLTQSII Trigger: AATGATACTTTGAGTAAGGTGCCTGGCATTAGTAGTATTGAGCAAGGCATGACTGGACTGAAAATTGGTGGTGACCTGACAGCTGCGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 72 bp | ACAACACCTAAACCAAAGTTTTCACTGCCTGTTCCATaGTTCTGGTTGAAGCCGGTTCCCCTATTCCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TTPKPKFSLPVP*FWLKPVPLFRG Trigger: TCCTCGGAATAGGGGAACCGGCTTCAACCAGAACAATGGAACAGGCAGTGAAAACTTTGGTTTAGGTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 90 bp | CCTTGCTCAATACTACTAATGCCAGGCACCTTACTCAAAGTATCATaGCCAAATCCGGCCTGTCCATCAGTAATAGCTCTCCCAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PCSILLMPGTLLKVS*PNPACPSVIALPRE Trigger: TTCTCTTGGGAGAGCTATTACTGATGGACAGGCCGGATTTGGCAATGATACTTTGAGTAAGGTGCCTGGCATTAGTAGTATTGAGCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS GCA 72 bp | GTCAGGTCACCACCAATTTTCAGTCCAGTCATGCCTTaGTCAATACTACTAATGCCAGGCACCTTACTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VRSPPIFSPVMP*SILLMPGTLLK Trigger: TTTGAGTAAGGTGCCTGGCATTAGTAGTATTGAGCAAGGCATGACTGGACTGAAAATTGGTGGTGACCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 72 bp | TGTCAGGTCACCACCAATTTTCAGTCCAGTCATGCCTaGCTCAATACTACTAATGCCAGGCACCTTACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CQVTTNFQSSHA*LNTTNARHLTQ Trigger: TTGAGTAAGGTGCCTGGCATTAGTAGTATTGAGCAAGGCATGACTGGACTGAAAATTGGTGGTGACCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CAA 72 bp | ATACTACTAATGCCAGGCACCTTACTCAAAGTATCATaGCCAAATCCGGCCTGTCCATCAGTAATAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILLMPGTLLKVS*PNPACPSVIAL Trigger: GAGAGCTATTACTGATGGACAGGCCGGATTTGGCAATGATACTTTGAGTAAGGTGCCTGGCATTAGTAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS CCA 72 bp | CTGTCCATCAGTAATAGCTCTCCCAAGAGAACTAGGTaGATAGCCGTAACTGCTACTATAAGCAGAATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSISNSSPKRTR*IAVTATISRIL Trigger: CAAAATTCTGCTTATAGTAGCAGTTACGGCTATCCACCTAGTTCTCTTGGGAGAGCTATTACTGATGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS TCA 72 bp | ATAGCCGTAACTGCTACTATAAGCAGAATTTTGTGTTaGTTGTCCCTGAGATCCACTTGTTCCCCATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IAVTATISRILC*LSLRSTCSPCR Trigger: TCTACATGGGGAACAAGTGGATCTCAGGGACAATCAACACAAAATTCTGCTTATAGTAGCAGTTACGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108345.9 ENSMUST00000108346.5 ENSMUST00000191774.6 |
||
| CDS TCA 72 bp | AATGGACGGAGCATAGTAACTAGGCATATATGGATCTaGCATTGGTGGATAGCTGTTATTACAATGAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: NGRSIVTRHIWI*HWWIAVITMKQ Trigger: TTGTTTCATTGTAATAACAGCTATCCACCAATGTCAGATCCATATATGCCTAGTTACTATGCTCCGTCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108346.5 |
||
| CDS CAA 72 bp | TTGGTGGATAGCTGTTATTACAATGAAACAACTGTTTaGCTCTCCTATATTTCTGATTTGTCTGGCTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: LVDSCYYNETTV*LSYISDLSGYL Trigger: TAAGTAGCCAGACAAATCAGAAATATAGGAGAGCAAAACAGTTGTTTCATTGTAATAACAGCTATCCACCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108346.5 |
||