Pregenerated sensors for YTHDF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038848Ensembl transcript IDs: ENSMUST00000037299.15, ENSMUST00000108876.9, ENSMUST00000124666.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACACCTTCTAGTTCCTTGCCACAGAGCCCAAACCTCATGCAGTaGCAGACGGTGGCAAGGAGAACTGGAGCACCGCTCTGTGTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: KTPSSSLPQSPNLMQ*QTVARRTGAPLCVG Trigger: GCCCACACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAGAAGGTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR CCA 90 bp | CTAGTTCCTTGCCACAGAGCCCAAACCTCATGCAGTGGCAGACGGTaGCAAGGAGAACTGGAGCACCGCTCTGTGTGGGCACTAAACTAT | + |
|
Preference number: 1 (lower is better) Translates to: LVPCHRAQTSCSGRR*QGELEHRSVWALNY Trigger: ATAGTTTAGTGCCCACACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR GCA 90 bp | GAATGTCGCAAAGCTGAACCAGACTTAAAACACCTTCTAGTTCCTTaGCACAGAGCCCAAACCTCATGCAGTGGCAGACGGTGGCAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ECRKAEPDLKHLLVP*HRAQTSCSGRRWQG Trigger: TCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAGAAGGTGTTTTAAGTCTGGTTCAGCTTTGCGACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR TCA 90 bp | GGCATGAGCACCACTTTCATGCTAAACTCCAACTCCAGATGGCGGTaGGCTCCTCCGAGGCTCCTCATTCCACAAAACATGATAGCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: GMSTTFMLNSNSRWR*APPRLLIPQNMIAN Trigger: ATTTGCTATCATGTTTTGTGGAATGAGGAGCCTCGGAGGAGCTCACCGCCATCTGGAGTTGGAGTTTAGCATGAAAGTGGTGCTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR TCA 90 bp | GATAAAGATGCAACAATCAACCCCGCACGAGGACGACACTGGAGCTaGCTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: DKDATINPARGRHWS*LGDSTKHTALKLCF Trigger: AAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTGCATCTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| 3UTR TCA 90 bp | GGACAACTAAAAATGATCTACGAACAACTAAGAATGTCGCAAAGCTaGACCAGACTTAAAACACCTTCTAGTTCCTTGCCACAGAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: GQLKMIYEQLRMSQS*TRLKTPSSSLPQSP Trigger: TGGGCTCTGTGGCAAGGAACTAGAAGGTGTTTTAAGTCTGGTTCAGCTTTGCGACATTCTTAGTTGTTCGTAGATCATTTTTAGTTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR-3UTR CCA 90 bp | AAGACAGTAAAGATCCTCTACAGTGGGCGCGTGCAGATTCAGTATGCGAGGGCGTGCAGTGGCAGACGGTaGCAAGGAGAACTGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: KTVKILYSGRVQIQYARACSGRR*QGELEH Trigger: GTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCA...CGCCCTCGCATACTGAATCTGCACGCGCCCACTGTAGAGGATCTTTACTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGCCCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACGCCACTTCAGTACTGTaGAGAGACATCAACAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HRAQTSCSGRRWQGELEHATSVL*RDINST Trigger: TGTGCTGTTGATGTCTCTTCACAGTACTGAAGTGGC...GTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGCCCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACGCCCATAGACAGCTGTaGGCACACTTAAAACTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HRAQTSCSGRRWQGELEHAHRQL*AHLKLK Trigger: TTTTAGTTTTAAGTGTGCTCACAGCTGTCTATGGGC...GTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGGACAACTAAAAATGATCTACGAACAACTAAGAATGTCGCAAAGCTGGGCAGGTCAGCAATATaGTGGATACCACAGATAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RKRTTKNDLRTTKNVAKLGRSAI*WIPQIV Trigger: TACTATCTGTGGTATCCATCATATTGCTGACCTGCC...CAGCTTTGCGACATTCTTAGTTGTTCGTAGATCATTTTTAGTTGTCCTCTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGGACAACTAAAAATGATCTACGAACAACTAAGAATGTCGCAAAGCTGATCAACAGCACATGCTaGATGGGCTTTTTGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RKRTTKNDLRTTKNVAKLINSTC*MGFLFA Trigger: AGCAAACAAAAAGCCCATTCAGCATGTGCTGTTGAT...CAGCTTTGCGACATTCTTAGTTGTTCGTAGATCATTTTTAGTTGTCCTCTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR CCA 72 bp | TGCCACAGAGCCCAAACCTCATGCAGTGGCAGACGGTaGCAAGGAGAACTGGAGCACCGCTCTGTGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CHRAQTSCSGRR*QGELEHRSVWA Trigger: TGCCCACACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR CCA 72 bp | TCTAGTTCCTTGCCACAGAGCCCAAACCTCATGCAGTaGCAGACGGTGGCAAGGAGAACTGGAGCACCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSSLPQSPNLMQ*QTVARRTGAPL Trigger: GAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR GCA 72 bp | CACCTTCTAGTTCCTTGCCACAGAGCCCAAACCTCATaGAGTGGCAGACGGTGGCAAGGAGAACTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HLLVPCHRAQTS*SGRRWQGELEH Trigger: GTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR GCA 72 bp | AAAGATCCTCTACAGTGGGCGCGTGCAGATTCAGTATaGGAGGGCGTCGGGCATGAGCACCACTTTCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: KDPLQWARADSV*EGVGHEHHFHA Trigger: AGCATGAAAGTGGTGCTCATGCCCGACGCCCTCGCATACTGAATCTGCACGCGCCCACTGTAGAGGATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR GCA 72 bp | AAAGCTGAACCAGACTTAAAACACCTTCTAGTTCCTTaGCACAGAGCCCAAACCTCATGCAGTGGCAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: KAEPDLKHLLVP*HRAQTSCSGRR Trigger: CCGTCTGCCACTGCATGAGGTTTGGGCTCTGTGGCAAGGAACTAGAAGGTGTTTTAAGTCTGGTTCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR TCA 72 bp | CCACGACTCCGTACAGGCAGTAACAGCTCGAGGAAGTaGCACGTTCTAAATACAAGTCTAAATAATACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRLRTGSNSSRK*HVLNTSLNNTA Trigger: AGCTGTATTATTTAGACTTGTATTTAGAACGTGTCACTTCCTCGAGCTGTTACTGCCTGTACGGAGTCGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR TCA 72 bp | GCACTAAACTATGGACAGCTTGCCCATAGACAGCTGTaGGCACACTTAAAACTAAAAGTTATTTGTCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALNYGQLAHRQL*AHLKLKVICLV Trigger: TACTAGACAAATAACTTTTAGTTTTAAGTGTGCTCACAGCTGTCTATGGGCAAGCTGTCCATAGTTTAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| 3UTR TCA 72 bp | AAAATGATCTACGAACAACTAAGAATGTCGCAAAGCTaGACCAGACTTAAAACACCTTCTAGTTCCTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KMIYEQLRMSQS*TRLKTPSSSLP Trigger: TGGCAAGGAACTAGAAGGTGTTTTAAGTCTGGTTCAGCTTTGCGACATTCTTAGTTGTTCGTAGATCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAGCCCCTTGCTGCTCATaGAGCGGAAGGCGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQSTPHEDDTGADSETAPAPCCS*SGRRRP Trigger: TGGACGGCGCCTTCCGCTCCATGAGCAGCAAGGGGC...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCCCACAGCTAGCTGGCTaGCTCTCCTCCAGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPHEDDTGADSETAPSPQLAG*LSSRAI Trigger: GATGGCTCTGGAGGAGAGTCAGCCAGCTAGCTGTGG...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | TCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATAGATGGGAGGGTCCCCTaGAGTGGACCATGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STPHEDDTGADSETAPSIDGRVP*SGPWCL Trigger: GAGGCACCATGGTCCACTGCAGGGGACCCTCCCATC...TATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCCCCAGACCCCCAGGCTaGCCAAAAACAGCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PRTRTTLELTRRQHQAYSPRPPG*PKTASC Trigger: GCATGATGCTGTTTTTGGGCAGCCTGGGGGTCTGGG...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCGATAAACAGGCCCCTTaGTGCTCATGGAGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTRTTLELTRRQHQAYSDKQAP*CSWSGR Trigger: CCTTCCGCTCCATGAGCAGCAAGGGGCCTGTTTATC...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCTGTCCTTTTGTTCTCTaGGGGTCCACGCTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPHEDDTGADSETAPSCPFVL*GSTLVA Trigger: GGCCACCAGCGTGGACCCCCAGAGAACAAAAGGACA...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACCGCTCTGTTGGCTGGACCAAAGGTaGGGGCTGAACAGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNLMQWQTVARRTGAPLCWLDQR*GLNRER Trigger: CCTCTCCCTGTTCAGCCCCCACCTTTGGTCCAGCCA...ACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | TCCGATGTTGTCCACGACTCCGTACAGGCAGTAACAGCTCGAGGAAGTGACACGACCAGACCCCAGCGCTaGTGCCGTAGTCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVVHDSVQAVTARGSDTTRPQR*CRSPQG Trigger: CCCCTGTGGACTACGGCACCAGCGCTGGGGTCTGGT...CGTGTCACTTCCTCGAGCTGTTACTGCCTGTACGGAGTCGTGGACAACATCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCGGATCCACAGCTAGCTaGCTGACTCTCCTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPHEDDTGADSETAPSGSTAS*LTLLQS Trigger: GCTCTGGAGGAGAGTCAGCCAGCTAGCTGTGGATCC...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCCTGATGTGCCGCAGCTaGTTGTTGGGCACATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPHEDDTGADSETAPSLMCRS*LLGTSF Trigger: GAAGGATGTGCCCAACAACCAGCTGCGGCACATCAG...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCTTGAGGGAGTCACTGTaGAAACCTGTCTGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PRTRTTLELTRRQHQAYSLRESL*KPVCPS Trigger: TGATGGGCAGACAGGTTTTCACAGTGACTCCCTCAA...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCAGGGGACTTCATCTCTaGCACCCCACAGAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSTPHEDDTGADSETAPSRGLHL*HPTEMS Trigger: GGACATTTCTGTGGGGTGGCAGAGATGAAGTCCCCT...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | CACAGAGCCCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACCGTTATTCTCCAGTCTaGTGTGCCGCAGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRAQTSCSGRRWQGELEHRYSPV*CAAAGC Trigger: ACAACCAGCTGCGGCACATCAGACTGGAGAATAACG...GTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGGGCTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR TCA 90 bp | TCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACGTTATTCTCCAGTCTaGTGTGCCGCAGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STPHEDDTGADSETAPSIRYSPV*CAAAGC Trigger: ACAACCAGCTGCGGCACATCAGACTGGAGAATAACG...TATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGGGGACTTCATCTCTaGCACCCCACAGAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQSTPHEDDTGADSETAPRGLHL*HPTEMS Trigger: GGACATTTCTGTGGGGTGGCAGAGATGAAGTCCCCT...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACCGCTCTGTAGTTACTGTCACTGTTaGCCCCTCCACTCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNLMQWQTVARRTGAPLCSYCHC*PLHSAQ Trigger: TTGGGCAGAGTGGAGGGGCCAACAGTGACAGTAACT...ACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | TCTCCTAGAGGACAGGTATCCGATGTTGTCCACGACTCCGTACAGGCAGTAACACCCTGCAGTGGACCATaGTGCCTCGCTGAGGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPRGQVSDVVHDSVQAVTPCSGP*CLAEGV Trigger: TACTCCCTCAGCGAGGCACCATGGTCCACTGCAGGG...TGTTACTGCCTGTACGGAGTCGTGGACAACATCGGATACCTGTCCTCTAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR TCA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCGCATCATGCATGAAGTaGTGGTCTCCATTACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTRTTLELTRRQHQAYSASCMK*WSPLLS Trigger: ACTTAGTAATGGAGACCATCACTTCATGCATGATGC...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCTATCACGGGAGTTTGTaGCAGGTTTGTTGTCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRTRTTLELTRRQHQAYSYHGSL*QVCCRY Trigger: ATAACGACAACAAACCTGTCACAAACTCCCGTGATA...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | TCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATAACTCTGCCCAAATGCTaGATTTCTGTTTCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STPHEDDTGADSETAPSITLPKC*ISVSRS Trigger: GCTCCTCGAAACAGAAATGCAGCATTTGGGCAGAGT...TATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACCTCATGCAGTGGCAGACGGTGGCAAGGAGAACTGGAGCACCGCTCTGTGGGGCAGAAGTAGGTTaGGCATTTCCAACAGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PNLMQWQTVARRTGAPLCGAEVG*AFPTEL Trigger: TAACTCTGTTGGAAATGCCCAACCTACTTCTGCCCC...ACAGAGCGGTGCTCCAGTTCTCCTTGCCACCGTCTGCCACTGCATGAGGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR TCA 90 bp | TCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATATATCACGGGAGTTTGTaGCAGGTTTGTTGTCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: STPHEDDTGADSETAPSIYHGSL*QVCCRY Trigger: ATAACGACAACAAACCTGTCACAAACTCCCGTGATA...TATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | TCCGATGTTGTCCACGACTCCGTACAGGCAGTAACAGCTCGAGGAAGTGACACGAAACAGCATCATGCATaGAGTGATGGTCTCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SDVVHDSVQAVTARGSDTKQHHA*SDGLHY Trigger: GTAATGGAGACCATCACTTCATGCATGATGCTGTTT...CGTGTCACTTCCTCGAGCTGTTACTGCCTGTACGGAGTCGTGGACAACATCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR GCA 90 bp | AACTCAAAAGGGCAGGTCAGCAATATGATGGATACCACAGATAGTAAAATGGCAGATGGGAGGGTCCCCTaGAGTGGACCATGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSKGQVSNMMDTTDSKMADGRVP*SGPWCL Trigger: GAGGCACCATGGTCCACTGCAGGGGACCCTCCCATC...TGCCATTTTACTATCTGTGGTATCCATCATATTGCTGACCTGCCCTTTTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCCCCTGCAGTGGACCATaGTGCCTCGCTGAGGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTPCSGP*CLAEGV Trigger: TACTCCCTCAGCGAGGCACCATGGTCCACTGCAGGG...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCGCCCCTTGCTGCTCATaGAGCGGAAGGCGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTKHTALKLCFQSQPLTAPCCS*SGRRRP Trigger: TGGACGGCGCCTTCCGCTCCATGAGCAGCAAGGGGC...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCACCAGACCCCAGCGCTaGTGCCGTAGTCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKHTALKLCFQSQPLTTRPQR*CRSPQG Trigger: CCCCTGTGGACTACGGCACCAGCGCTGGGGTCTGGT...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCCCCAGACCCCCAGGCTaGCCAAAAACAGCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTPRPPG*PKTASC Trigger: GCATGATGCTGTTTTTGGGCAGCCTGGGGGTCTGGG...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCAGGCCAACCATGCCCTaGTCCAGACTGTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTRPTMP*SRLFIP Trigger: TGGGATGAACAGTCTGGAGCAGGGCATGGTTGGCCT...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCTTCTCCAGTCTGATGTaGCGCAGCTGGTTGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTFSSLM*RSWLLG Trigger: GCCCAACAACCAGCTGCGGCACATCAGACTGGAGAA...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCCTGATGTGCCGCAGCTaGTTGTTGGGCACATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTLMCRS*LLGTSF Trigger: GAAGGATGTGCCCAACAACCAGCTGCGGCACATCAG...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCTTGGCCCCTCCACTCTaGCCAAATGCTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTLAPPL*PNAAFL Trigger: CAGAAATGCAGCATTTGGGCAGAGTGGAGGGGCCAA...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCAGTTACTGTCACTGTTaGCCCCTCCACTCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTSYCHC*PLHSAQ Trigger: TTGGGCAGAGTGGAGGGGCCAACAGTGACAGTAACT...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCGATAAACAGGCCCCTTaGTGCTCATGGAGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKHTALKLCFQSQPLTDKQAP*CSWSGR Trigger: CCTTCCGCTCCATGAGCAGCAAGGGGCCTGTTTATC...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CCA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACTGTCCTTTTGTTCTCTaGGGGTCCACGCTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDCPFVL*GSTLVA Trigger: GGCCACCAGCGTGGACCCCCAGAGAACAAAAGGACA...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | ACTCGGAGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCGCCGCAGCTGGTTGTTaGGCACATCCTTCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRRQHQAYSFKTLFSKSTAAAGC*AHPSQK Trigger: TTTTTGTGAAGGATGTGCCCAACAACCAGCTGCGGC...GGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCTCCGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACAGGCCAACCATGCCCTaGTCCAGACTGTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDRPTMP*SRLFIP Trigger: TGGGATGAACAGTCTGGAGCAGGGCATGGTTGGCCT...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR GCA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCTTGGCCCCTCCACTCTaGCCAAATGCTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKHTALKLCFQSQPLTLAPPL*PNAAFL Trigger: CAGAAATGCAGCATTTGGGCAGAGTGGAGGGGCCAA...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACACCATGGTGCCTCGCTaGGGGAGTAAGGAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDTMVPR*GSKEIQ Trigger: TTGGATTTCCTTACTCCCTCAGCGAGGCACCATGGT...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR TCA 90 bp | AGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACACCATGGTGCCTCGCTaGGGGAGTAAGGAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQHQAYSFKTLFSKSTINTMVPR*GSKEIQ Trigger: TTGGATTTCCTTACTCCCTCAGCGAGGCACCATGGT...GTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | AGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACTTGAGGGAGTCACTGTaGAAACCTGTCTGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RQHQAYSFKTLFSKSTINLRESL*KPVCPS Trigger: TGATGGGCAGACAGGTTTTCACAGTGACTCCCTCAA...GTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACGTGGGTAAGTGTAACTaGTCCCATAGGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDVGKCN*SHRLSS Trigger: AGAGCTCAGCCTATGGGAGCAGTTACACTTACCCAC...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | AGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACGCCGCAGCTGGTTGTTaGGCACATCCTTCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQHQAYSFKTLFSKSTINAAAGC*AHPSQK Trigger: TTTTTGTGAAGGATGTGCCCAACAACCAGCTGCGGC...GTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACACTCTGCCCAAATGCTaGATTTCTGTTTCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDTLPKC*ISVSRS Trigger: GCTCCTCGAAACAGAAATGCAGCATTTGGGCAGAGT...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CCA 90 bp | AGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACGGGGCAGAAGTAGGTTaGGCATTTCCAACAGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQHQAYSFKTLFSKSTINGAEVG*AFPTEL Trigger: TAACTCTGTTGGAAATGCCCAACCTACTTCTGCCCC...GTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCGCATCATGCATGAAGTaGTGGTCTCCATTACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSTKHTALKLCFQSQPLTASCMK*WSPLLS Trigger: ACTTAGTAATGGAGACCATCACTTCATGCATGATGC...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCGAGTTACTGTCACTGTaGGCCCCTCCACTCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRTRTTLELTRRQHQAYSELLSL*APPLCP Trigger: TGGGCAGAGTGGAGGGGCCAACAGTGACAGTAACTC...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCCCGTCCAGGCGCTTGTaGCCGTGTTCAGTACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: PRTRTTLELTRRQHQAYSPSRRL*PCSVLH Trigger: GTGTAGTACTGAACACGGCAACAAGCGCCTGGACGG...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAGCGCCGTCCAGGCGCTaGTTGCCGTGTTCAGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: QQSTPHEDDTGADSETAPAPSRR*LPCSVL Trigger: TAGTACTGAACACGGCAACAAGCGCCTGGACGGCGC...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | TCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATAGAGTTACTGTCACTGTaGGCCCCTCCACTCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STPHEDDTGADSETAPSIELLSL*APPLCP Trigger: TGGGCAGAGTGGAGGGGCCAACAGTGACAGTAACTC...TATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAGTCAGTGCCACACTGTaGACAACTGAACCCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQSTPHEDDTGADSETAPVSATL*TTEPTV Trigger: GACGGTGGGTTCAGTTGTCAACAGTGTGGCACTGAC...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCATACAGCACATTTGTCCCACCATaGCCAGAAAGGACACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRTRTTLELTRRQHQAYSTFVPP*PERTPV Trigger: GACTGGTGTCCTTTCTGGCAATGGTGGGACAAATGT...GCTGTATGCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCTTTGGAGCAGGGCCCTaGTTATCCCAAGTACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QSTPHEDDTGADSETAPSFGAGP*LSQVPM Trigger: CATTGGTACTTGGGATAACAAGGGCCCTGCTCCAAA...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCTATTATCTTGTCCTTTaGTTCTCTGGGGGTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QSTPHEDDTGADSETAPSYYLVL*FSGGPR Trigger: GCGTGGACCCCCAGAGAACAAAAGGACAAGATAATA...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS CCA 90 bp | TTCTCCAGGACAGGGTGGGATTCTACACTCGGGGCAGAAGTAGGTTaGGCATTTCCAACAGAGTTACTGTCACTGTTGGCCCCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FSRTGWDSTLGAEVG*AFPTELLSLLAPPL Trigger: GAGTGGAGGGGCCAACAGTGACAGTAACTCTGTTGGAAATGCCCAACCTACTTCTGCCCCGAGTGTAGAATCCCACCCTGTCCTGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCATATTATCTTGTCCTTTaGTTCTCTGGGGGTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSTPHEDDTGADSETAPYYLVL*FSGGPR Trigger: GCGTGGACCCCCAGAGAACAAAAGGACAAGATAATA...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCATGGCTGCCCATGAAGTaGGTTTTGAAACTGGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: QQSTPHEDDTGADSETAPWLPMK*VLKLAC Trigger: ACATGCCAGTTTCAAAACCAACTTCATGGGCAGCCA...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCGAGTTTGTGACAGGTTaGTTGTCGTTATTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSTPHEDDTGADSETAPSEFVTG*LSLFSS Trigger: ACTGGAGAATAACGACAACAAACCTGTCACAAACTC...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAAGCCCCATGAAGTTGGTTTaGAAACTGGCATGTTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: QSTPHEDDTGADSETAPSPMKLV*KLACLH Trigger: ATGTAAACATGCCAGTTTCAAAACCAACTTCATGGG...GCTTGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CAACAATCAACCCCGCACGAGGACGACACTGGAGCTGACTCGGAGACAGCACCAGTCTCCATTACTAAGTaGTCCATAGGTAGTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: QQSTPHEDDTGADSETAPVSITK*SIGSEI Trigger: TATCTCACTACCTATGGACAACTTAGTAATGGAGAC...TGGTGCTGTCTCCGAGTCAGCTCCAGTGTCGTCCTCGTGCGGGGTTGATTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAGAGGACAGGTATCCGATGTTGTCCACGACTCCGTACAGGCAGTAACATTTGGAGCAGGGCCCTaGTTATCCCAAGTACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPRGQVSDVVHDSVQAVTFGAGP*LSQVPM Trigger: CATTGGTACTTGGGATAACAAGGGCCCTGCTCCAAA...TGTTACTGCCTGTACGGAGTCGTGGACAACATCGGATACCTGTCCTCTAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | TCCGATGTTGTCCACGACTCCGTACAGGCAGTAACAGCTCGAGGAAGTGACACGGTCTCCATTACTAAGTaGTCCATAGGTAGTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHDSVQAVTARGSDTVSITK*SIGSEI Trigger: TATCTCACTACCTATGGACAACTTAGTAATGGAGAC...CGTGTCACTTCCTCGAGCTGTTACTGCCTGTACGGAGTCGTGGACAACATCGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | AGACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACGCGCCGTCCAGGCGCTaGTTGCCGTGTTCAGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: RQHQAYSFKTLFSKSTINAPSRR*LPCSVL Trigger: TAGTACTGAACACGGCAACAAGCGCCTGGACGGCGC...GTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | CATCACACTGCCTGTACTATCAGATTCCTACAATTAAAGCTTAGCGTTACTGGTCGGGGCAGAAGTAGGTaGGGCATTTCCAACAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HHTACTIRFLQLKLSVTGRGRSR*GISNRV Trigger: AACTCTGTTGGAAATGCCCAACCTACTTCTGCCCCG...ACCAGTAACGCTAAGCTTTAATTGTAGGAATCTGATAGTACAGGCAGTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACCCGTCCAGGCGCTTGTaGCCGTGTTCAGTACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDPSRRL*PCSVLH Trigger: GTGTAGTACTGAACACGGCAACAAGCGCCTGGACGG...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCCGGGGCAGAAGTAGGTaGGGCATTTCCAACAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DSTKHTALKLCFQSQPLTRGRSR*GISNRV Trigger: AACTCTGTTGGAAATGCCCAACCTACTTCTGCCCCG...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCACATTTGTCCCACCATaGCCAGAAAGGACACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSTKHTALKLCFQSQPLTTFVPP*PERTPV Trigger: GACTGGTGTCCTTTCTGGCAATGGTGGGACAAATGT...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | AACTCAAAAGGGCAGGTCAGCAATATGATGGATACCACAGATAGTAAAATGGCACTGGCATGTTTACATTaGTCCCACCATTGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSKGQVSNMMDTTDSKMALACLH*SHHCQK Trigger: TTTCTGGCAATGGTGGGACAAATGTAAACATGCCAG...TGCCATTTTACTATCTGTGGTATCCATCATATTGCTGACCTGCCCTTTTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCCTGGCATGTTTACATTaGTCCCACCATTGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSTKHTALKLCFQSQPLTLACLH*SHHCQK Trigger: TTTCTGGCAATGGTGGGACAAATGTAAACATGCCAG...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS-3UTR CAA 90 bp | TACTGGTATAAAAACTTAAGACAGCATCAGGATTCTCTAGAGAAGAAAGAGGACTGGCTGCCCATGAAGTaGGTTTTGAAACTGGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: YWYKNLRQHQDSLEKKEDWLPMK*VLKLAC Trigger: ACATGCCAGTTTCAAAACCAACTTCATGGGCAGCCA...GTCCTCTTTCTTCTCTAGAGAATCCTGATGCTGTCTTAAGTTTTTATACCAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037299.15 |
||
| CDS-3UTR CAA 90 bp | GACAGCACCAAGCATACAGCTTTAAAACTCTGTTTTCAAAGTCAACCATTAACCCCCATGAAGTTGGTTTaGAAACTGGCATGTTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: DSTKHTALKLCFQSQPLTPMKLV*KLACLH Trigger: ATGTAAACATGCCAGTTTCAAAACCAACTTCATGGG...GGTTAATGGTTGACTTTGAAAACAGAGTTTTAAAGCTGTATGCTTGGTGCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS GCA 72 bp | TCCATAGGTAGTGAGATACGGGATGGGAGGGTCCCCTaGAGTGGACCATGGTGCCTCGCTGAGGGAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIGSEIRDGRVP*SGPWCLAEGVR Trigger: CCTTACTCCCTCAGCGAGGCACCATGGTCCACTGCAGGGGACCCTCCCATCCCGTATCTCACTACCTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 ENSMUST00000124666.2 |
||
| CDS CCA 72 bp | AGGATGGAGGGCAGGGCCTCCGGATCCACAGCTAGCTaGCTGACTCTCCTCCAGAGCCATCCACTACCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RMEGRASGSTAS*LTLLQSHPLPL Trigger: TAAAGGTAGTGGATGGCTCTGGAGGAGAGTCAGCCAGCTAGCTGTGGATCCGGAGGCCCTGCCCTCCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108876.9 |
||
| CDS TCA 72 bp | TGGAGGGCAGGGCCTCCGGATCCACAGCTAGCTGGCTaGCTCTCCTCCAGAGCCATCCACTACCTTTATTAT | + |
|
Preference number: 6 (lower is better) Translates to: WRAGPPDPQLAG*LSSRAIHYLYY Trigger: ATAATAAAGGTAGTGGATGGCTCTGGAGGAGAGTCAGCCAGCTAGCTGTGGATCCGGAGGCCCTGCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108876.9 |
||
| CDS CAA 90 bp | TTTCTCCAGGACAGGGTGGGATTCTACACTCGGGGCAGAAGTAGGTaGGGCATTTCCAACAGAGTTACTGTCACTGTTGGCCCCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FLQDRVGFYTRGRSR*GISNRVTVTVGPST Trigger: AGTGGAGGGGCCAACAGTGACAGTAACTCTGTTGGAAATGCCCAACCTACTTCTGCCCCGAGTGTAGAATCCCACCCTGTCCTGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||
| CDS CAA 72 bp | GACAGGGTGGGATTCTACACTCGGGGCAGAAGTAGGTaGGGCATTTCCAACAGAGTTACTGTCACTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DRVGFYTRGRSR*GISNRVTVTVG Trigger: GCCAACAGTGACAGTAACTCTGTTGGAAATGCCCAACCTACTTCTGCCCCGAGTGTAGAATCCCACCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037299.15 ENSMUST00000108876.9 |
||