Pregenerated sensors for YPEL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034059Ensembl transcript IDs: ENSMUST00000090729.9, ENSMUST00000111643.3, ENSMUST00000238573.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGATCCGCCTCCTCCAGAGGGCGGGGACCTCGGGAGCAGTGGCTaGGCCTTGGGGAATGCCTGTAAAGACTGCTCTCTCTGGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: DDPPPPEGGDLGSSG*ALGNACKDCSLWQQ Trigger: CTGTTGCCAGAGAGAGCAGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCTCTGGAGGAGGCGGATCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR TCA 90 bp | CCTGGGGTATCCCAGGCTCCTGTTCCAAAGAACCTGGTACTGCTGTaGCGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: PGVSQAPVPKNLVLL*RGKGGGGHLEPGFP Trigger: GGGGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACCAGGTTCTTTGGAACAGGAGCCTGGGATACCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR CCA 90 bp | TATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTaGTCCCTCAGCGCTGATGATCCGCCTCCTCCAGAGGGCGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: YHTKVSFAGGSHRKD*SLSADDPPPPEGGD Trigger: GTCCCCGCCCTCTGGAGGAGGCGGATCATCAGCGCTGAGGGACCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR CCA 90 bp | CTGTATTTCCCTGACTGCTACCCACTCCTGAGCCTTAGACACCCCTaGGGTATCCCAGGCTCCTGTTCCAAAGAACCTGGTACTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: LYFPDCYPLLSLRHP*GIPGSCSKEPGTAV Trigger: CACAGCAGTACCAGGTTCTTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTAGCAGTCAGGGAAATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR CCA 90 bp | GTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCACTTaGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTC | + |
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Preference number: 1 (lower is better) Translates to: VIHSPICLSLRPAIT*FLVPQFSPSPVLYF Trigger: GAAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR TCA 90 bp | TGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTTaGAAGTGCCTCTTTAGTGCTAAGGTAAACAGTGGAGTGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: WSSFSHPTQWQRLDT*KCLFSAKVNSGVKW Trigger: CCATTTCACTCCACTGTTTACCTTAGCACTAAAGAGGCACTTTCAAGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGGCCAGGAGACTGGTGTaGGGAGGGTGGGGCATGCGG | + |
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Preference number: 2 (lower is better) Translates to: HLEPGFPRGGQYSCWCGLARRLV*GGWGMR Trigger: CCGCATGCCCCACCCTCCTCACACCAGTCTCCTGGC...CAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | TACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTTCCAAAGCCAGGAGACTGGTGTaGGGAGGGTGGGGCATGCGG | + |
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Preference number: 2 (lower is better) Translates to: YPLLSLRHPWGIPGSCSKARRLV*GGWGMR Trigger: CCGCATGCCCCACCCTCCTCACACCAGTCTCCTGGC...TTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGGTGTGGACTGCTCAGCAGGGCCAGGAGACTGGTGTGAGGAGGGTGGGGGTACTCATGCTGGTGTaGACTGCTCAGCAGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: MLVWTAQQGQETGVRRVGVLMLV*TAQQGQ Trigger: CTGGCCCTGCTGAGCAGTCCACACCAGCATGAGTAC...CCCCACCCTCCTCACACCAGTCTCCTGGCCCTGCTGAGCAGTCCACACCAGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGGTGGGGGCTGTTCTTaGAGCAGCTTTTCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTGGGCS*SSFSHP Trigger: GGGGTGGGAAAAGCTGCTCCAAGAACAGCCCCCACC...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGGAAACCCCTGTCACTaGTTCCCAGGGTCTAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTGNPCH*FPGSRV Trigger: AACCCTAGACCCTGGGAATCAGTGACAGGGGTTTCC...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | CGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGAACCTGGTACTGCTGTaGCGGGGGAAGGGAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RPAITWFLVPQFSPSPVLNLVLL*RGKGGG Trigger: TCCTCCTCCCTTCCCCCGTCACAGCAGTACCAGGTT...CAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGCTCTCTCTGGCAACAGCAACCTGGTACTGCTGTaGCGGGGGAAGGGAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: AVAEPWGMPVKTALSGNSNLVLL*RGKGGG Trigger: TCCTCCTCCCTTCCCCCGTCACAGCAGTACCAGGTT...GCTGTTGCCAGAGAGAGCAGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGCTGAGGAGGAGGTCACTTaGAACCAGGTTTCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGTRFPQGWAVLMLVWTAEEEVT*NQVSPG Trigger: CCCTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTC...AGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTCAGACTCTGGGGCCCTaGTATCTGAGACCAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTQTLGP*YLRPEF Trigger: AAATTCTGGTCTCAGATATCAGGGCCCCAGAGTCTG...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTCTGTATTTCCCTGACTaGTACCCACTCCTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTLYFPD*YPLLSL Trigger: AAGGCTCAGGAGTGGGTAGCAGTCAGGGAAATACAG...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCAGGTTTCCCCAGGGGTaGGCAGTACTCATGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: EFAPCHHLVSGATVLSFPRFPQG*AVLMLV Trigger: CACCAGCATGAGTACTGCCCACCCCTGGGGAAACCT...GGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGCTCTCTCTGGCAACAGCAGGTTTCCCCAGGGGTaGGCAGTACTCATGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AVAEPWGMPVKTALSGNSRFPQG*AVLMLV Trigger: CACCAGCATGAGTACTGCCCACCCCTGGGGAAACCT...GCTGTTGCCAGAGAGAGCAGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGGAGGAGGAGGTCACTTaGAACCAGGTTTCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RPAITWFLVPQFSPSPVLEEEVT*NQVSPG Trigger: CCCTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTC...CAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCATGTCAGCTACCGAGTaGAGTCCTGTGAGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: WYCCDGGREEEVTWNQVSMSATE*SPVSRR Trigger: CCTCCTGCTCACAGGACTCCACTCGGTAGCTGACAT...GGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111643.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTAGCCTTAGACACCCCTaGGGTATCCCAGGCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: CLSLRPAITWFLVPQFSPSLRHP*GIPGSC Trigger: ACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCT...AGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGCTCTCTCTGGCAACAGCCGCCCTGCCATCACTTaGTTTCTGGTGCCACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: AVAEPWGMPVKTALSGNSRPAIT*FLVPQF Trigger: GAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG...GCTGTTGCCAGAGAGAGCAGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATCTGCCTGAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCCAAAGAACCTGGTACTaGTGTGACGGGGGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PICLSLRPAITWFLVPQFQRTWY*CDGGRE Trigger: CTCCCTTCCCCCGTCACAGCAGTACCAGGTTCTTTG...GAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCAAAGAACCTGGTACTaGTGTGACGGGGGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LSLRPAITWFLVPQFSPSQRTWY*CDGGRE Trigger: CTCCCTTCCCCCGTCACAGCAGTACCAGGTTCTTTG...GGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTCCCTGACTGCTACCCAGTACTCATGCTGGTGTaGACTGCTCAGCAGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LVPQFSPSPVLYFPDCYPVLMLV*TAQQGQ Trigger: CTGGCCCTGCTGAGCAGTCCACACCAGCATGAGTAC...TGGGTAGCAGTCAGGGAAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGCTACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTCCATCACTTGGTTTCTaGTGCCACAGTTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: DCYPLLSLRHPWGIPGSCPSLGF*CHSSLL Trigger: AAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGG...ACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTAGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTTCTTGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTAGCCTTAGACACCCCTaGGGTATCCCAGGCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GCSWSSFSHPTQWQRLDTSLRHP*GIPGSC Trigger: ACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCT...AGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCAAGAACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTGAAATGGAAACCCCTGTCACTGATTCCCAGGGTCTAGGGTTTGGTTTTGGTGGGGGCTGTTCTTaGAGCAGCTTTTCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: WSEMETPVTDSQGLGFGFGGGCS*SSFSHP Trigger: GGGGTGGGAAAAGCTGCTCCAAGAACAGCCCCCACC...AAAACCAAACCCTAGACCCTGGGAATCAGTGACAGGGGTTTCCATTTCACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTCAAAGATTAGATACTTaGAAGTGCCTCTTTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTQRLDT*KCLFSA Trigger: AGCACTAAAGAGGCACTTTCAAGTATCTAATCTTTG...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGCTCGGGAGCAGTGGCTaGGCCTTGGGGAATGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FMYHTKVSFAGGSHRKDWLGSSG*ALGNAC Trigger: ACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAG...CCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTTGGGGAATGCCTGTAAAGACTGCTCTCTCTGGCAACAGCCGGCTAGGGGTCTTTCACCATGTGTaGCATCTCAATGATGTACTT | + |
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Preference number: 2 (lower is better) Translates to: EPWGMPVKTALSGNSRLGVFHHV*HLNDVL Trigger: AAGTACATCATTGAGATGTCACACATGGTGAAAGAC...CCCTAGCCGGCTGTTGCCAGAGAGAGCAGTCTTTACAGGCATTCCCCAAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111643.3 |
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| 3UTR-3UTR CCA 90 bp | GATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCAGGTTTCCCCAGGGGTaGGCAGTACTCATGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: DQHLVIHSPICLSLRPAIRFPQG*AVLMLV Trigger: CACCAGCATGAGTACTGCCCACCCCTGGGGAAACCT...GATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGCCTTCTTTGTATTTCTaGCTGGTCTCAAAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RPAITWFLVPQFSPSPVLPSLYF*LVSKAC Trigger: ACAGGCTTTTGAGACCAGCCAGAAATACAAAGAAGG...CAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111643.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTCTTGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTAGCCCAGTGTGGTCTTaGAGCTTTCGCAGAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: GCSWSSFSHPTQWQRLDTSPVWS*SFRRKC Trigger: ACATTTTCTGCGAAAGCTGCAAGACCACACTGGGCT...AGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCAAGAACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111643.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTTCTTGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTCCATCACTTGGTTTCTaGTGCCACAGTTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GCSWSSFSHPTQWQRLDTPSLGF*CHSSLL Trigger: AAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGG...AGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCAAGAACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGCGCCCTGCCATCACTTaGTTTCTGGTGCCACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FMYHTKVSFAGGSHRKDWRPAIT*FLVPQF Trigger: GAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG...CCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR CAA 90 bp | AAAGCTGATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTaGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KADQHLVIHSPICLS*RPAITWFLVPQFSP Trigger: AGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR GCA 90 bp | AACACTTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGCTGTATTTCCCTGACTaGTACCCACTCCTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: NTLCIIQKFRSLVAVTGKLYFPD*YPLLSL Trigger: AAGGCTCAGGAGTGGGTAGCAGTCAGGGAAATACAG...CTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTGAAATGGAAACCCCTGTCACTGATTCCCAGGGTCTAGGGTTTGGTTTTCAAAGATTAGATACTTaGAAGTGCCTCTTTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: WSEMETPVTDSQGLGFGFQRLDT*KCLFSA Trigger: AGCACTAAAGAGGCACTTTCAAGTATCTAATCTTTG...AAAACCAAACCCTAGACCCTGGGAATCAGTGACAGGGGTTTCCATTTCACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR CCA 90 bp | AACACTTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGATCTTTGCTTTTCTGTaGTCTAGCCCCACCACCAAT | + |
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Preference number: 2 (lower is better) Translates to: NTLCIIQKFRSLVAVTGKIFAFL*SSPTTN Trigger: ATTGGTGGTGGGGCTAGACCACAGAAAAGCAAAGAT...CTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGATGTGTGACATCTCAATaGTGTACTTCCCTTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLYVSYKSFVRWWQSQERCVTSQ*CTSLLC Trigger: ACAAAGAAGGGAAGTACATCATTGAGATGTCACACA...TCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111643.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGCGGGGACCTCGGGAGCAGTGGCTGAGCCTTGGGGAATGCCTGTAAAGACTGGGTGGGGGCTGTTCTaGGAGCAGCTTTTCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: RAGTSGAVAEPWGMPVKTGWGLF*EQLFPP Trigger: GGGTGGGAAAAGCTGCTCCAAGAACAGCCCCCACCC...AGTCTTTACAGGCATTCCCCAAGGCTCAGCCACTGCTCCCGAGGTCCCCGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR CCA 72 bp | AGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTaGACTGCTCAGCAGGGCCAGGAGACTGGTGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RFPQGWAVLMLV*TAQQGQETGVR Trigger: CCTCACACCAGTCTCCTGGCCCTGCTGAGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR CCA 72 bp | GAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTaGTGTGGACTGCTCAGCAGGGCCAGGAGACTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EPGFPRGGQYSC*CGLLSRARRLV Trigger: CACCAGTCTCCTGGCCCTGCTGAGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR GCA 72 bp | GGGTATCCCAGGCTCCTGTTCCAAAGAACCTGGTACTaGTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GYPRLLFQRTWY*CDGGREEEVTW Trigger: CCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACCAGGTTCTTTGGAACAGGAGCCTGGGATACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR CCA 72 bp | AGGAGGAGGTCACTTGGAACCAGGTTTCCCCAGGGGTaGGCAGTACTCATGCTGGTGTGGACTGCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRRSLGTRFPQG*AVLMLVWTAQQ Trigger: CTGCTGAGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAGTGACCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTTCCAAAGGAGGAGGAGGTCACTaGGAACCAGGTTTCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YPLLSLRHPWGIPGSCSKGGGGH*EPGFPR Trigger: CCTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTCC...TTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR TCA 72 bp | TCCCAGGCTCCTGTTCCAAAGAACCTGGTACTGCTGTaGCGGGGGAAGGGAGGAGGAGGTCACTTGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SQAPVPKNLVLL*RGKGGGGHLEP Trigger: TGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACCAGGTTCTTTGGAACAGGAGCCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR CCA 72 bp | CCTGACTGCTACCCACTCCTGAGCCTTAGACACCCCTaGGGTATCCCAGGCTCCTGTTCCAAAGAACCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PDCYPLLSLRHP*GIPGSCSKEPG Trigger: ACCAGGTTCTTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTAGCAGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR CCA 72 bp | AGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCACTTaGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPICLSLRPAIT*FLVPQFSPSPV Trigger: AACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTGAAATGGAAACCCCTGTCACTGATTCCCAGGGTCTAGGGTTTGGTTTTGGAGGAGGAGGTCACTaGGAACCAGGTTTCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WSEMETPVTDSQGLGFGFGGGGH*EPGFPR Trigger: CCTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTCC...AAAACCAAACCCTAGACCCTGGGAATCAGTGACAGGGGTTTCCATTTCACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTTCTTGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTCCTATCTGCCTGAGTTaGCGCCCTGCCATCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GCSWSSFSHPTQWQRLDTPICLS*RPAITW Trigger: CCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGG...AGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCAAGAACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGGGGTGGGGGCTGTTCTaGGAGCAGCTTTTCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: FMYHTKVSFAGGSHRKDWGWGLF*EQLFPP Trigger: GGGTGGGAAAAGCTGCTCCAAGAACAGCCCCCACCC...CCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR GCA 72 bp | AAAGCTGATCAACATTTGGTAATTCATAGTCCTATCTaGCTGAGTTTGCGCCCTGCCATCACTTGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KADQHLVIHSPI*LSLRPAITWFL Trigger: CAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| 3UTR TCA 72 bp | TTTTCCCACCCCACCCAATGGCAAAGATTAGATACTTaGAAGTGCCTCTTTAGTGCTAAGGTAAACAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSHPTQWQRLDT*KCLFSAKVNSG Trigger: TCCACTGTTTACCTTAGCACTAAAGAGGCACTTTCAAGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | CATGCTGGTGTGGACTGCTCAGCAGGGCCAGGAGACTGGTGTGAGGAGGGTGGGGCGGGCTGGAGGGGCTaGTGCGGTGCAGCCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HAGVDCSAGPGDWCEEGGAGWRG*CGAAPT Trigger: TGTGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGC...CCCACCCTCCTCACACCAGTCTCCTGGCCCTGCTGAGCAGTCCACACCAGCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | GGTACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCCGGACGCAACTGTAAGTaGGGTGGCAGCGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTAVTGEGRRRSLGTRFPGRNCK*GGSGAG Trigger: ACCTGCCCCGCTGCCACCGCACTTACAGTTGCGTCC...GGGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | TGGTACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCGGTCACAGCTGGGCATaGCGGGTTGGAGGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WYCCDGGREEEVTWNQVSGHSWA*RVGGRC Trigger: GCATCGTCCTCCAACCCGTCATGCCCAGCTGTGACC...GGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGGGACGCAACTGTAAGTaGGGTGGCAGCGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLEPGFPRGGQYSCWCGLGRNCK*GGSGAG Trigger: ACCTGCCCCGCTGCCACCGCACTTACAGTTGCGTCC...CAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | TACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTTCCAAACTGGGCATGACGGGTTaGAGGACGATGCCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YPLLSLRHPWGIPGSCSKLGMTG*RTMPWR Trigger: CCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAG...TTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTGGCTGGAGGGGCTGGTaGGGTGCAGCCCCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHHLVSGATVLSFPCSVFGWRGW*GAAPTE Trigger: CTCTGTGGGGGCTGCACCGCACCAGCCCCTCCAGCC...AAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCCCAGAGCCCAGTGTGGTCTTaGAGCTTTCGCAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TAVTGEGRRRSLGTRFPQSPVWS*SFRRKC Trigger: ACATTTTCTGCGAAAGCTGCAAGACCACACTGGGCT...CTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | TATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGTCCGGGTTGGAGGACGATaGCCTGGCGGGCTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YVSYKSFVRWWQSQERLVRVGGR*PGGLEG Trigger: CCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCG...GACCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGCTCGGCCATGGCTTCCTTaGAAGGACTTGGAAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTRFPQGWAVLMLVWTARPWLP*KDLEIS Trigger: GCTTATTTCCAAGTCCTTCCAAGGAAGCCATGGCCG...AGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCTGGAGGACGATGCCCTaGCGGGCTGGAGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQHLVIHSPICLSLRPAIWRTMP*RAGGAG Trigger: ACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCA...GATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTCCGAGTGGAGTCCTGTaGGCAGGAGGCGCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHHLVSGATVLSFPCSVFPSGVL*AGGAVQ Trigger: CTGAACAGCGCCTCCTGCTCACAGGACTCCACTCGG...AAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGACTGGTCCCTCAGCGCTGATGATCCGCCTCCTCCAGAGGGCGGGGACTGTGTGACATCTCAATaGTGTACTTCCCTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKDWSLSADDPPPPEGGDCVTSQ*CTSLLC Trigger: ACAAAGAAGGGAAGTACATCATTGAGATGTCACACA...GTCCCCGCCCTCTGGAGGAGGCGGATCATCAGCGCTGAGGGACCAGTCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | CGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGCGGCCATGGCTTCCTTaGAAGGACTTGGAAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPAITWFLVPQFSPSPVLRPWLP*KDLEIS Trigger: GCTTATTTCCAAGTCCTTCCAAGGAAGCCATGGCCG...CAGAACAGGGGAAGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | GATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCCCGAGTGGAGTCCTGTaGGCAGGAGGCGCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQHLVIHSPICLSLRPAIPSGVL*AGGAVQ Trigger: CTGAACAGCGCCTCCTGCTCACAGGACTCCACTCGG...GATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCTACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTCCTTCTTTGTATTTCTaGCTGGTCTCAAAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCYPLLSLRHPWGIPGSCPSLYF*LVSKAC Trigger: ACAGGCTTTTGAGACCAGCCAGAAATACAAAGAAGG...ACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCGAGGCGCTGTTCAGCTaGCCCACAACCCACGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DQHLVIHSPICLSLRPAIEALFS*PTTHVD Trigger: GTCAACGTGGGTTGTGGGCCAGCTGAACAGCGCCTC...GATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGGGACGCAACTGTAAGTaGGGTGGCAGCGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMYHTKVSFAGGSHRKDWGRNCK*GGSGAG Trigger: ACCTGCCCCGCTGCCACCGCACTTACAGTTGCGTCC...CCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTCCCTGACTGCTACCCAAGCCCAGTGTGGTCTTaGAGCTTTCGCAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPQFSPSPVLYFPDCYPSPVWS*SFRRKC Trigger: ACATTTTCTGCGAAAGCTGCAAGACCACACTGGGCT...TGGGTAGCAGTCAGGGAAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | CCTATCTGCCTGAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCGTCTTTCACCATGTGTaGCATCTCAATGATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PICLSLRPAITWFLVPQFVFHHV*HLNDVL Trigger: AAGTACATCATTGAGATGTCACACATGGTGAAAGAC...GAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | AACACTTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGGAGGCGCTGTTCAGCTaGCCCACAACCCACGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTLCIIQKFRSLVAVTGKEALFS*PTTHVD Trigger: GTCAACGTGGGTTGTGGGCCAGCTGAACAGCGCCTC...CTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| 3UTR CAA 72 bp | CAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTaGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLVIHSPICLS*RPAITWFLVPQ Trigger: CTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCCACAGTTCTCTCCTTCCCCTGTTCTGTATTTCCCTGACTGCTACCCATGTGTGACATCTCAATaGTGTACTTCCCTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPQFSPSPVLYFPDCYPCVTSQ*CTSLLC Trigger: ACAAAGAAGGGAAGTACATCATTGAGATGTCACACA...TGGGTAGCAGTCAGGGAAATACAGAACAGGGGAAGGAGAGAACTGTGGCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGTATCATACAAAAGTTTCGTTCGCTGGTGGCAGTCACAGGAAAGACTGGATGTCAGCTACCGAGTaGAGTCCTGTGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMYHTKVSFAGGSHRKDWMSATE*SPVSRR Trigger: CCTCCTGCTCACAGGACTCCACTCGGTAGCTGACAT...CCAGTCTTTCCTGTGACTGCCACCAGCGAACGAAACTTTTGTATGATACATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTTCTTGGAGCAGCTTTTCCCACCCCACCCAATGGCAAAGATTAGATACTCCTTCTTTGTATTTCTaGCTGGTCTCAAAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSWSSFSHPTQWQRLDTPSLYF*LVSKAC Trigger: ACAGGCTTTTGAGACCAGCCAGAAATACAAAGAAGG...AGTATCTAATCTTTGCCATTGGGTGGGGTGGGAAAAGCTGCTCCAAGAACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
||
| CDS CCA 90 bp | GGGCCAGGGTCACAGCTGGGCATGACGGGTTGGAGGACGATGCCCTaGCGGGCTGGAGGGGCTGGTGCGGTGCAGCCCCCACAGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGSQLGMTGWRTMP*RAGGAGAVQPPQRR Trigger: CCGTCTCTGTGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGACCCTGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS CCA 90 bp | AAACATGCGGGGGCCGGGCCAGGGTCACAGCTGGGCATGACGGGTTaGAGGACGATGCCCTGGCGGGCTGGAGGGGCTGGTGCGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHAGAGPGSQLGMTG*RTMPWRAGGAGAVQ Trigger: CTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGACCCTGGCCCGGCCCCCGCATGTTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS TCA 90 bp | TGGTGGGTAAACATGCGGGGGCCGGGCCAGGGTCACAGCTGGGCATaGCGGGTTGGAGGACGATGCCCTGGCGGGCTGGAGGGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WWVNMRGPGQGHSWA*RVGGRCPGGLEGLV Trigger: CACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGACCCTGGCCCGGCCCCCGCATGTTTACCCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS CCA 90 bp | GTCACAGCTGGGCATGACGGGTTGGAGGACGATGCCCTGGCGGGCTaGAGGGGCTGGTGCGGTGCAGCCCCCACAGAGACGGTCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTAGHDGLEDDALAG*RGWCGAAPTETVAG Trigger: ACCTGCGACCGTCTCTGTGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS CCA 90 bp | GGGCATGACGGGTTGGAGGACGATGCCCTGGCGGGCTGGAGGGGCTaGTGCGGTGCAGCCCCCACAGAGACGGTCGCAGGTAAAGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: GHDGLEDDALAGWRG*CGAAPTETVAGKAT Trigger: CGTTGCTTTACCTGCGACCGTCTCTGTGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCCCAGGCTGGGCATGACGGGTaGGAGGACGATGCCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAVTGEGRRRSLGTRFPQAGHDG*EDDALA Trigger: CGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGC...CTGGGGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
||
| CDS GCA 90 bp | GACAGTGGACGCAACTGTAAGTGCGGTGGCAGCGGGGCAGGTAACTaGGGAAAGTCTTGGTGGGTAAACATGCGGGGGCCGGGCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: DSGRNCKCGGSGAGN*GKSWWVNMRGPGQG Trigger: ACCCTGGCCCGGCCCCCGCATGTTTACCCACCAAGACTTTCCGCAGTTACCTGCCCCGCTGCCACCGCACTTACAGTTGCGTCCACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS CCA 90 bp | AACTGTAAGTGCGGTGGCAGCGGGGCAGGTAACTGCGGAAAGTCTTaGTGGGTAAACATGCGGGGGCCGGGCCAGGGTCACAGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: NCKCGGSGAGNCGKS*WVNMRGPGQGHSWA Trigger: TGCCCAGCTGTGACCCTGGCCCGGCCCCCGCATGTTTACCCACCAAGACTTTCCGCAGTTACCTGCCCCGCTGCCACCGCACTTACAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS CCA 90 bp | GTCAGCTACCGAGTGGAGTCCTGTGAGCAGGAGGCGCTGTTCAGCTaGCCCACAACCCACGTTGACCACGGAGTTAAACAGGTAGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VSYRVESCEQEALFS*PTTHVDHGVKQVGP Trigger: CGGGCCTACCTGTTTAACTCCGTGGTCAACGTGGGTTGTGGGCCAGCTGAACAGCGCCTCCTGCTCACAGGACTCCACTCGGTAGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | GGTACTGCTGTGACGGGGGAAGGGAGGAGGAGGTCACTTGGAACCAGGTTTCCCCCGGCCATGGCTTCCTaGGAAGGACTTGGAAATAAG | + |
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Preference number: 5 (lower is better) Translates to: GTAVTGEGRRRSLGTRFPPAMAS*EGLGNK Trigger: CTTATTTCCAAGTCCTTCCAAGGAAGCCATGGCCGG...GGGAAACCTGGTTCCAAGTGACCTCCTCCTCCCTTCCCCCGTCACAGCAGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | GACTGCTACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTATAAGCTCATCGTGTTaGGCCAAGTGTGCTCGACAG | + |
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Preference number: 5 (lower is better) Translates to: DCYPLLSLRHPWGIPGSCISSSC*AKCARQ Trigger: CTGTCGAGCACACTTGGCCAAACACGATGAGCTTAT...ACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTAGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | CACTTGGAACCAGGTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGATAAGCTCATCGTGTTaGGCCAAGTGTGCTCGACAG | + |
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Preference number: 5 (lower is better) Translates to: HLEPGFPRGGQYSCWCGLISSSC*AKCARQ Trigger: CTGTCGAGCACACTTGGCCAAACACGATGAGCTTAT...CAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAACCTGGTTCCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | GTTTCCCCAGGGGTGGGCAGTACTCATGCTGGTGTGGACTGCTCAGCAGGGCCACTTCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT | + |
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Preference number: 5 (lower is better) Translates to: VSPGVGSTHAGVDCSAGPLPWKD*EISSSC Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGAAG...TGGCCCTGCTGAGCAGTCCACACCAGCATGAGTACTGCCCACCCCTGGGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | TACCCACTCCTGAGCCTTAGACACCCCTGGGGTATCCCAGGCTCCTGTTCCAAAATAAGCTCATCGTGTTaGGCCAAGTGTGCTCGACAG | + |
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Preference number: 5 (lower is better) Translates to: YPLLSLRHPWGIPGSCSKISSSC*AKCARQ Trigger: CTGTCGAGCACACTTGGCCAAACACGATGAGCTTAT...TTTGGAACAGGAGCCTGGGATACCCCAGGGGTGTCTAAGGCTCAGGAGTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | TGCCTGAGTTTGCGCCCTGCCATCACTTGGTTTCTGGTGCCACAGTTCTCTCCTCTTCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT | + |
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Preference number: 5 (lower is better) Translates to: CLSLRPAITWFLVPQFSPLPWKD*EISSSC Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGAAG...AGGAGAGAACTGTGGCACCAGAAACCAAGTGATGGCAGGGCGCAAACTCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS-3UTR CAA 90 bp | GATCAACATTTGGTAATTCATAGTCCTATCTGCCTGAGTTTGCGCCCTGCCATCCCGGCCATGGCTTCCTaGGAAGGACTTGGAAATAAG | + |
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Preference number: 5 (lower is better) Translates to: DQHLVIHSPICLSLRPAIPAMAS*EGLGNK Trigger: CTTATTTCCAAGTCCTTCCAAGGAAGCCATGGCCGG...GATGGCAGGGCGCAAACTCAGGCAGATAGGACTATGAATTACCAAATGTTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS CCA 72 bp | GGGGCCGGGCCAGGGTCACAGCTGGGCATGACGGGTTaGAGGACGATGCCCTGGCGGGCTGGAGGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GAGPGSQLGMTG*RTMPWRAGGAG Trigger: ACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGACCCTGGCCCGGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
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| CDS CCA 72 bp | GGGTTGGAGGACGATGCCCTGGCGGGCTGGAGGGGCTaGTGCGGTGCAGCCCCCACAGAGACGGTCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GLEDDALAGWRG*CGAAPTETVAG Trigger: ACCTGCGACCGTCTCTGTGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
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| CDS CCA 72 bp | TCACAGCTGGGCATGACGGGTTGGAGGACGATGCCCTaGCGGGCTGGAGGGGCTGGTGCGGTGCAGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SQLGMTGWRTMP*RAGGAGAVQPP Trigger: TGGGGGCTGCACCGCACCAGCCCCTCCAGCCCGCCAGGGCATCGTCCTCCAACCCGTCATGCCCAGCTGTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238573.2 |
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| CDS CCA 72 bp | GGTGGCAGCGGGGCAGGTAACTGCGGAAAGTCTTGGTaGGTAAACATGCGGGGGCCGGGCCAGGGTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GGSGAGNCGKSW*VNMRGPGQGHS Trigger: GCTGTGACCCTGGCCCGGCCCCCGCATGTTTACCCACCAAGACTTTCCGCAGTTACCTGCCCCGCTGCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS CCA 72 bp | TGCGGTGGCAGCGGGGCAGGTAACTGCGGAAAGTCTTaGTGGGTAAACATGCGGGGGCCGGGCCAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: CGGSGAGNCGKS*WVNMRGPGQGH Trigger: GTGACCCTGGCCCGGCCCCCGCATGTTTACCCACCAAGACTTTCCGCAGTTACCTGCCCCGCTGCCACCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS GCA 72 bp | CGCAACTGTAAGTGCGGTGGCAGCGGGGCAGGTAACTaGGGAAAGTCTTGGTGGGTAAACATGCGGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RNCKCGGSGAGN*GKSWWVNMRGP Trigger: CGGCCCCCGCATGTTTACCCACCAAGACTTTCCGCAGTTACCTGCCCCGCTGCCACCGCACTTACAGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS GCA 72 bp | TGGCCAAGTGTGCTCGACAGTGGACGCAACTGTAAGTaGGGTGGCAGCGGGGCAGGTAACTGCGGAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: WPSVLDSGRNCK*GGSGAGNCGKS Trigger: AGACTTTCCGCAGTTACCTGCCCCGCTGCCACCGCACTTACAGTTGCGTCCACTGTCGAGCACACTTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090729.9 ENSMUST00000111643.3 ENSMUST00000238573.2 |
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| CDS CCA 72 bp | CGAGTGGAGTCCTGTGAGCAGGAGGCGCTGTTCAGCTaGCCCACAACCCACGTTGACCACGGAGTTAAACAG | + |
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Preference number: 6 (lower is better) Translates to: RVESCEQEALFS*PTTHVDHGVKQ Trigger: CTGTTTAACTCCGTGGTCAACGTGGGTTGTGGGCCAGCTGAACAGCGCCTCCTGCTCACAGGACTCCACTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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| CDS TCA 72 bp | TTTCGCAGAAAATGTCAGCTACCGAGTGGAGTCCTGTaGGCAGGAGGCGCTGTTCAGCTGGCCCACAACCCA | + |
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Preference number: 6 (lower is better) Translates to: FRRKCQLPSGVL*AGGAVQLAHNP Trigger: TGGGTTGTGGGCCAGCTGAACAGCGCCTCCTGCTCACAGGACTCCACTCGGTAGCTGACATTTTCTGCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090729.9 ENSMUST00000238573.2 |
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