Pregenerated sensors for YPEL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018427Ensembl transcript IDs: ENSMUST00000018571.5, ENSMUST00000238921.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGAGAGCTGGTCAGCTAGACTTCAAAGTGAAGGTAGCTGGCGGCTaGGGTACCCTCAGGCCTTCCCTTTCTCCTCTTCTGTCCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: ARAGQLDFKVKVAGG*GTLRPSLSPLLSLP Trigger: GGGCAAGGACAGAAGAGGAGAAAGGGAAGGCCTGAGGGTACCTCAGCCGCCAGCTACCTTCACTTTGAAGTCTAGCTGACCAGCTCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | ATAGCCCCATCATCCACAGTGGCACAGGGCAGGTGGAGCGAGAGCTaGTCAGCTAGACTTCAAAGTGAAGGTAGCTGGCGGCTGAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: IAPSSTVAQGRWSES*SARLQSEGSWRLRY Trigger: GTACCTCAGCCGCCAGCTACCTTCACTTTGAAGTCTAGCTGACCAGCTCTCGCTCCACCTGCCCTGTGCCACTGTGGATGATGGGGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR GCA 90 bp | ATCCTAGGACTCCCAGGTTCCCCTGTTCTGTTGCTCATGCTCACATaGCGATGTTCTGACAGCCATCAGGCAGCTCTCATGTGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ILGLPGSPVLLLMLT*RCSDSHQAALMWAG Trigger: CCCTGCCCACATGAGAGCTGCCTGATGGCTGTCAGAACATCGGCATGTGAGCATGAGCAACAGAACAGGGGAACCTGGGAGTCCTAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | TCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTAGAAGCTaGACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SRWLSSQICFTGCRS*THRRGTGRGSTLRE Trigger: TTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAGCTTCTACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | TCCTCCCCAACCCTAACTCAAGGAAGCTTGGGTGCGTGCGGTGGGTaGAGGAGTAATATTGAATCTGTAATCCCTCCCTACTGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: SSPTLTQGSLGACGG*RSNIESVIPPYCWT Trigger: GGTCCAGCAGTAGGGAGGGATTACAGATTCAATATTACTCCTTCACCCACCGCACGCACCCAAGCTTCCTTGAGTTAGGGTTGGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | TCAGGACAAAGCCGTGTCCACCACGGCTTTCTCCCTGATGGAATTTaGTTCTGCTGGGGATGTGGACTGGAAAATGTTCCTGGAGGGATG | + |
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Preference number: 1 (lower is better) Translates to: SGQSRVHHGFLPDGI*FCWGCGLENVPGGM Trigger: CATCCCTCCAGGAACATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGTGGTGGACACGGCTTTGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | CATTTCCAGATCAGGACAAAGCCGTGTCCACCACGGCTTTCTCCCTaGTGGAATTTGGTTCTGCTGGGGATGTGGACTGGAAAATGTTCC | + |
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Preference number: 1 (lower is better) Translates to: HFQIRTKPCPPRLSP*WNLVLLGMWTGKCS Trigger: GGAACATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGTGGTGGACACGGCTTTGTCCTGATCTGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | AGTCTTAGGAATGTGAAACTGGAGAAATGTGTGTCACTGACCACTTaGGCCTGGGAGTCACGGGTAGTTTTTCTGGCCCTCAGTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SLRNVKLEKCVSLTT*AWESRVVFLALSGP Trigger: AGGCCCACTGAGGGCCAGAAAAACTACCCGTGACTCCCAGGCTCAAGTGGTCAGTGACACACATTTCTCCAGTTTCACATTCCTAAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR GCA 90 bp | CTTCACTGGCTCCAATCTGAACTCTTCCTCCCAGAACCTTGCCTCTaGATTTTTACATTTCCTGCTTGCTATCAGGAGTTCCCGGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LHWLQSELFLPEPCL*IFTFPACYQEFPVH Trigger: GTGGACCGGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATGCAGAGGCAAGGTTCTGGGAGGAAGAGTTCAGATTGGAGCCAGTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR GCA 90 bp | GTGTCCCAGAAGACAGGCAGTCTACTGAGCTGGCTGACTTCCTATTaGCCTGGCAAGTCTCAATTTGTCCATTTCCAGATCAGGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: VSQKTGSLLSWLTSY*PGKSQFVHFQIRTK Trigger: CTTTGTCCTGATCTGGAAATGGACAAATTGAGACTTGCCAGGGCAATAGGAAGTCAGCCAGCTCAGTAGACTGCCTGTCTTCTGGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | CCTGCCCAAGGTCACCCAAAGGACTTCCCTTTCCCTGAACCTATGTaGAGTGAAGGGGTGAGGTCTTTGGTTATGCTGAGTCAATCATTT | + |
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Preference number: 1 (lower is better) Translates to: PAQGHPKDFPFPEPM*SEGVRSLVMLSQSF Trigger: AAATGATTGACTCAGCATAACCAAAGACCTCACCCCTTCACTCCACATAGGTTCAGGGAAAGGGAAGTCCTTTGGGTGACCTTGGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR GCA 90 bp | CTAAGCCTTCACTGGCTCCAATCTGAACTCTTCCTCCCAGAACCTTaGCTCTGCATTTTTACATTTCCTGCTTGCTATCAGGAGTTCCCG | + |
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Preference number: 1 (lower is better) Translates to: LSLHWLQSELFLPEP*LCIFTFPACYQEFP Trigger: CGGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATGCAGAGGCAAGGTTCTGGGAGGAAGAGTTCAGATTGGAGCCAGTGAAGGCTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | GAAGCTACTGATCATCGGATGAGGAAAGATGTGCTAAGCCTTCACTaGCTCCAATCTGAACTCTTCCTCCCAGAACCTTGCCTCTGCATT | + |
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Preference number: 1 (lower is better) Translates to: EATDHRMRKDVLSLH*LQSELFLPEPCLCI Trigger: AATGCAGAGGCAAGGTTCTGGGAGGAAGAGTTCAGATTGGAGCCAGTGAAGGCTTAGCACATCTTTCCTCATCCGATGATCAGTAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | TCAGAAACGTTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTaGTCATCGGATGAGGAAAGATGTGCTAAGCCTTCACTGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SETLCTKNCWSHGSY*SSDEERCAKPSLAP Trigger: TGGAGCCAGTGAAGGCTTAGCACATCTTTCCTCATCCGATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAACGTTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | TTTGTACACATTGATCCACCAGCTGAGATCTTTACTTTATCTACATaGTCTGTCATAGGAGCTGGGGTGGTCGGTACTCAGCCAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FVHIDPPAEIFTLST*SVIGAGVVGTQPGP Trigger: GGGACCTGGCTGAGTACCGACCACCCCAGCTCCTATGACAGATCATGTAGATAAAGTAAAGATCTCAGCTGGTGGATCAATGTGTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | GACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTaGCTCCTGTTCTCACCAAACCACTGTAAGACGCTGGACAGATCT | + |
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Preference number: 1 (lower is better) Translates to: DKSMVHSLCRLGKGS*LLFSPNHCKTLDRS Trigger: AGATCTGTCCAGCGTCTTACAGTGGTTTGGTGAGAACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | TCTAGGAATCCTTTTGTGTCCCAGAAGACAGGCAGTCTACTGAGCTaGCTGACTTCCTATTGCCCTGGCAAGTCTCAATTTGTCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: SRNPFVSQKTGSLLS*LTSYCPGKSQFVHF Trigger: GAAATGGACAAATTGAGACTTGCCAGGGCAATAGGAAGTCAGCCAGCTCAGTAGACTGCCTGTCTTCTGGGACACAAAAGGATTCCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | TCATCGGATGAGGAAAGATGTGCTAAGCCTTCACTGGCTCCAATCTaGACTCTTCCTCCCAGAACCTTGCCTCTGCATTTTTACATTTCC | + |
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Preference number: 1 (lower is better) Translates to: SSDEERCAKPSLAPI*TLPPRTLPLHFYIS Trigger: GGAAATGTAAAAATGCAGAGGCAAGGTTCTGGGAGGAAGAGTTCAGATTGGAGCCAGTGAAGGCTTAGCACATCTTTCCTCATCCGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | AGACAAGCTGTGAGTGGAGCTAAGAATGGTCATAAGAAGCACTTTTaGTTTCACCGTCACAAAGGGAAGCCTGATGAGTTTTGGTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RQAVSGAKNGHKKHF*FHRHKGKPDEFWSH Trigger: GTGGGACCAAAACTCATCAGGCTTCCCTTTGTGACGGTGAAACCAAAAGTGCTTCTTATGACCATTCTTAGCTCCACTCACAGCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | CAGACAGACAGACAGACAAATCCATGGTACACAGTCTTTGCAGGCTaGGAAAAGGAAGTTGACTCCTGTTCTCACCAAACCACTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: QTDRQTNPWYTVFAG*EKEVDSCSHQTTVR Trigger: TCTTACAGTGGTTTGGTGAGAACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCTGTCTGTCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 90 bp | AATACAGTTTGTAAACACAGACAGACAGACAGACAGACAAATCCATaGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: NTVCKHRQTDRQTNP*YTVFAGWEKEVDSC Trigger: ACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCTGTCTGTCTGTCTGTCTGTGTTTACAAACTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 90 bp | GACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTCATaGCTGTATAGTAATTTTATTAATCAACCACAATTTCAAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: DRSNSRRTTPFGYIS*LYSNFINQPQFQRQ Trigger: TTGTCTTTGAAATTGTGGTTGATTAATAAAATTACTATACAGTCATGAAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR GCA 90 bp | AGGACCAGCCTAGCTAGAGAACAAGATTCTGAGAAGTACCTAATATaGCCATATTTTAACATTATCTTCTGCCTAAGAAATAAACGAAAT | + |
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Preference number: 1 (lower is better) Translates to: RTSLAREQDSEKYLI*PYFNIIFCLRNKRN Trigger: ATTTCGTTTATTTCTTAGGCAGAAGATAATGTTAAAATATGGGCATATTAGGTACTTCTCAGAATCTTGTTCTCTAGCTAGGCTGGTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCGCCCTCAGTGGGCCTTaGTGTGCAGTGGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LNTQKRNWPRLHPQGKKIALSGP*CAVGWG Trigger: CCCCCACCCCACTGCACAGCAAGGCCCACTGAGGGC...GATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTGCCGCCCGCTGGGCTaGGGACTCGCTAATACTGCT | + |
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Preference number: 2 (lower is better) Translates to: LNTQKRNWPRLHPQGKKICRPLG*GLANTA Trigger: AGCAGTATTAGCGAGTCCTCAGCCCAGCGGGCGGCA...GATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCTGCATTTTTACATTTCCTGCTTGCTATCAGGAGTTCCCGGTCCACAGCGTCAGGGTGGGAGGATaGCCCCTGATGGCAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: CLCIFTFPACYQEFPVHSVRVGG*PLMARP Trigger: GGGCCTTGCCATCAGGGGTCATCCTCCCACCCTGAC...GCTGTGGACCGGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATGCAGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTCAGAGAGGCCTTGGGTaGAGGAGCCTCTGCCGCCCG | + |
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Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVQRGLG*RSLCRP Trigger: CGGGCGGCAGAGGCTCCTGCACCCAAGGCCTCTCTG...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCAGGGTGACAATAGCCCCATCATCCACAGTGGCACAGGGCAGGTGGAGCTCCCTGATGGAATTTaGTTCTGCTGGGGATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GFQGDNSPIIHSGTGQVELPDGI*FCWGCG Trigger: TCCACATCCCCAGCAGAACCAAATTCCATCAGGGAG...CTCCACCTGCCCTGTGCCACTGTGGATGATGGGGCTATTGTCACCCTGGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTTTTTCTGGCCCTCAGTaGGCCTTGCTGTGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCFSGPQ*ALLCSG Trigger: CCCACTGCACAGCAAGGCCCACTGAGGGCCAGAAAA...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCAGGGTGACAATAGCCCCATCATCCACAGTGGCACAGGGCAGGTGGAGACAATGGATGACGCTTaGAGCTGGCAAGTCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: GFQGDNSPIIHSGTGQVETMDDA*SWQVLG Trigger: TCCTAAGACTTGCCAGCTCCAAGCGTCATCCATTGT...CTCCACCTGCCCTGTGCCACTGTGGATGATGGGGCTATTGTCACCCTGGAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 90 bp | CAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTaGCTTTGGGCTCTTGGTCCACTCACACATGAAAACCAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QKRNWPRLHPQGKKI*LWALGPLTHENQRE Trigger: TTCCCTCTGGTTTTCATGTGTGAGTGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTATATTGCACCCTCTTaGCCCTTCCCCAATCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LNTQKRNWPRLHPQGKKIYIAPS*PFPNPR Trigger: CCTAGGATTGGGGAAGGGGCAAGAGGGTGCAATATA...GATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGCTTTCTCCCTGATGGAATTTGGTTCTGCTGGGGATGTGGACTGGAAAATGTCAAGGAAGCTTGGGTaGGTGCGGTGGGTGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TAFSLMEFGSAGDVDWKMSRKLG*VRWVKE Trigger: CTCCTTCACCCACCGCACGCACCCAAGCTTCCTTGA...CATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCAGGGTGACAATAGCCCCATCATCCACAGTGGCACAGGGCAGGTGGAGGGTAGAATGTTCAGTTaGGTGGCATTCACATGGATG | + |
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Preference number: 2 (lower is better) Translates to: GFQGDNSPIIHSGTGQVEGRMFS*VAFTWM Trigger: CATCCATGTGAATGCCACCCAACTGAACATTCTACC...CTCCACCTGCCCTGTGCCACTGTGGATGATGGGGCTATTGTCACCCTGGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTTCCCTGAACCTATGTaGAGTGAAGGGGTGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LNTQKRNWPRLHPQGKKIFPEPM*SEGVRS Trigger: AGACCTCACCCCTTCACTCCACATAGGTTCAGGGAA...GATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTCCACTATAAAGGGGACACCTCTTTTGTACACATTGATCCACCAGCTGGAGGTGGGGCGGGGGTaGGTGGATGGATTCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EISTIKGTPLLYTLIHQLEVGRG*VDGFQG Trigger: ACCCTGGAATCCATCCACCCACCCCCGCCCCACCTC...CAGCTGGTGGATCAATGTGTACAAAAGAGGTGTCCCCTTTATAGTGGAGATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTCTCCTCTTCTGTCCTTaGCCACCCCTGCCCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPLLFCP*PPLPKV Trigger: GACCTTGGGCAGGGGTGGGCAAGGACAGAAGAGGAG...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTCCACTATAAAGGGGACACCTCTTTTGTACACATTGATCCACCAGCTGGTGGCACAGGGCAGGTaGAGCGAGAGCTGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: EISTIKGTPLLYTLIHQLVAQGR*SESWSA Trigger: AGCTGACCAGCTCTCGCTCCACCTGCCCTGTGCCAC...CAGCTGGTGGATCAATGTGTACAAAAGAGGTGTCCCCTTTATAGTGGAGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTTGGCATTCACATGGATaGTGGACCGGATGGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCWHSHG*WTGWML Trigger: TAGCATCCATCCGGTCCAGCATCCATGTGAATGCCA...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 90 bp | CTGGGGATGTGGACTGGAAAATGTTCCTGGAGGGATGCTTTAGCATaGGTTAGCCAGGCAACAGGCTCTTATCTCCATGAGCTCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LGMWTGKCSWRDALA*VSQATGSYLHELTL Trigger: AAGAGTGAGCTCATGGAGATAAGAGCCTGTTGCCTGGCTAACCAATGCTAAAGCATCCCTCCAGGAACATTTTCCAGTCCACATCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTGTGCTAAGCCTTCACTaGCTCCAATCTGAACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCVLSLH*LQSELF Trigger: GAAGAGTTCAGATTGGAGCCAGTGAAGGCTTAGCAC...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTCAAAGTGAAGGTAGCTaGCGGCTGAGGTACCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPQSEGS*RLRYPQ Trigger: CTGAGGGTACCTCAGCCGCCAGCTACCTTCACTTTG...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGAAACGTTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTGATCATGCCAGTCACCAAAAATaGTGGTGTCAGGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TQKRCAQRIAGPMEATDHASHQK*WCQGGR Trigger: CCTCCCACCCTGACACCATCATTTTTGGTGACTGGC...ATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAACGTTTCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTGTTCAAGATTTGATTTaGCAGCCTCTGCCTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFVQDLI*QPLPEP Trigger: GGGTTCAGGCAGAGGCTGGCAAATCAAATCTTGAAC...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CCA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTGAATTGCTGGTCCCATaGAAGCTACTGATCATCGGA | + |
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Preference number: 2 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFELLVP*KLLIIG Trigger: TCCGATGATCAGTAGCTTCCATGGGACCAGCAATTC...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR TCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTGAGACAGAGAGACAGTaGTTTAGAGGCCAGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVETERQ*FRGQSP Trigger: TGGTGACTGGCCTCTAAATCACTGTCTCTCTGTCTC...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTTACCGATTTTTACTGTaGTTTGGGCTAAATGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCYRFLL*FGLNGT Trigger: TGTCCCATTTAGCCCAAAGCACAGTAAAAATCGGTA...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTGATGGAATTTGGTTCTaGTGGGGATGTGGACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVDGIWF*WGCGLE Trigger: TTCCAGTCCACATCCCCAGCAGAACCAAATTCCATC...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTCATTCACATGGATGCTaGACCGGATGGATGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVHSHGC*TGWMLS Trigger: TGATAGCATCCATCCGGTCCAGCATCCATGTGAATG...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTATTTTTACTGTGCTTTaGGCTAAATGGGACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCIFTVL*AKWDTH Trigger: GTGTGTGTCCCATTTAGCCCAAAGCACAGTAAAAAT...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGGTCTTTGGTTATGCTaGGTCAATCATTTGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPGLWLC*VNHLVR Trigger: CCTCACCAAATGATTGACTCAGCATAACCAAAGACC...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCTCCACTATAAAGGGGACACCTCTTTTGTACACATTGATCCACCAGCTGACAGTACAGTTATATTaGACCCTCTTGCCCCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: EISTIKGTPLLYTLIHQLTVQLY*TLLPLP Trigger: GGGAAGGGGCAAGAGGGTGCAATATAACTGTACTGT...CAGCTGGTGGATCAATGTGTACAAAAGAGGTGTCCCCTTTATAGTGGAGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTAGGGAAAGAAAATCTTaGTTTGGGCTCTTGGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVRERKS*FGLLVH Trigger: GTGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCT...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAATCTCCACTATAAAGGGGACACCTCTTTTGTACACATTGATCCACCAGCTGGAATGTTCAGTTGGGTaGCATTCACATGGATGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EISTIKGTPLLYTLIHQLECSVG*HSHGCW Trigger: CCAGCATCCATGTGAATGCCACCCAACTGAACATTC...CAGCTGGTGGATCAATGTGTACAAAAGAGGTGTCCCCTTTATAGTGGAGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGGAATTTGGTTCTGCTaGGGATGTGGACTGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPGIWFC*GCGLEN Trigger: ATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCC...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTTCTATTCCAATTTCTTaGAAGTTCTCCCAACTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SEAQTSRWLSSQICFTGCSIPIS*KFSQLQ Trigger: CTGTAGTTGGGAGAACTTCCAAGAAATTGGAATAGA...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAATCTCCACTATAAAGGGGACACCTCTTTTGTACACATTGATCCACCAGCTGATCCCTCCCTACTGCTaGACCACACTGTTAAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EISTIKGTPLLYTLIHQLIPPYC*TTLLKD Trigger: ATCTTTTAACAGTGTGGTCCAGCAGTAGGGAGGGAT...CAGCTGGTGGATCAATGTGTACAAAAGAGGTGTCCCCTTTATAGTGGAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTCAAGTCTTAGGAATGTaGAACTGGAGAAATGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVQVLGM*NWRNVC Trigger: ACACACATTTCTCCAGTTTCACATTCCTAAGACTTG...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTTTTACTTTATCTACATaGTCTGTCATAGGAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVFTLST*SVIGAG Trigger: CCCAGCTCCTATGACAGATCATGTAGATAAAGTAAA...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTAATCCACATAATAGCTaGATTGATGCAACACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPNPHNS*IDATQP Trigger: AGGCTGTGTTGCATCAATCCAGCTATTATGTGGATT...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTTTTTCTAGCCAATACTaGGCAAGAAAGTATCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFFSSQY*ARKYQF Trigger: GAATTGATACTTTCTTGCCCAGTATTGGCTAGAAAA...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGAAACGTTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTGATCATCATTTTTACATTTCCTaGTTGCTATCAGGAGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TQKRCAQRIAGPMEATDHHFYIS*LLSGVP Trigger: GGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATG...ATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAACGTTTCTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | CCCTGTTCTGTTGCTCATGCTCACATGCCGATGTTCTaGCAGCCATCAGGCAGCTCTCATGTGGGCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PCSVAHAHMPMF*QPSGSSHVGRA Trigger: GGCCCTGCCCACATGAGAGCTGCCTGATGGCTGTCAGAACATCGGCATGTGAGCATGAGCAACAGAACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | TCATCCACAGTGGCACAGGGCAGGTGGAGCGAGAGCTaGTCAGCTAGACTTCAAAGTGAAGGTAGCTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SSTVAQGRWSES*SARLQSEGSWR Trigger: CCGCCAGCTACCTTCACTTTGAAGTCTAGCTGACCAGCTCTCGCTCCACCTGCCCTGTGCCACTGTGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGGCCCTCAGTGGGCCTaGCTGTGCAGTGGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPGPQWA*LCSGVG Trigger: CCCCACCCCACTGCACAGCAAGGCCCACTGAGGGCC...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | GGTCAGCTAGACTTCAAAGTGAAGGTAGCTGGCGGCTaGGGTACCCTCAGGCCTTCCCTTTCTCCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GQLDFKVKVAGG*GTLRPSLSPLL Trigger: CAGAAGAGGAGAAAGGGAAGGCCTGAGGGTACCTCAGCCGCCAGCTACCTTCACTTTGAAGTCTAGCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR GCA 72 bp | CTCCCAGGTTCCCCTGTTCTGTTGCTCATGCTCACATaGCGATGTTCTGACAGCCATCAGGCAGCTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LPGSPVLLLMLT*RCSDSHQAALM Trigger: CATGAGAGCTGCCTGATGGCTGTCAGAACATCGGCATGTGAGCATGAGCAACAGAACAGGGGAACCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR GCA 72 bp | TTTGGTCCCACCCCCAAACTTGTAGTTCAAGGACCCTaGCCCTTTCTCCACCCAGGGCACCATAGATCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FGPTPKLVVQGP*PFLHPGHHRSS Trigger: ACTGGATCTATGGTGCCCTGGGTGGAGAAAGGGGCAGGGTCCTTGAACTACAAGTTTGGGGGTGGGACCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | ATCAGGACAAAGCCGTGTCCACCACGGCTTTCTCCCTaGTGGAATTTGGTTCTGCTGGGGATGTGGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: IRTKPCPPRLSP*WNLVLLGMWTG Trigger: TCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGTGGTGGACACGGCTTTGTCCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR GCA 72 bp | ACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTTaGTTTGGGCTCTTGGTCCACTCACACATGAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TGRGSTLRERKS*FGLLVHSHMKT Trigger: GGTTTTCATGTGTGAGTGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | CCGCGGCTCCACCCTCAGGGAAAGAAAATCTTGCTTTaGGCTCTTGGTCCACTCACACATGAAAACCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRLHPQGKKILL*ALGPLTHENQR Trigger: CCTCTGGTTTTCATGTGTGAGTGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCTGAGGGTGGAGCCGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTTGTGTCACTGACCACTaGAGCCTGGGAGTCACGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFCVTDH*SLGVTG Trigger: ACCCGTGACTCCCAGGCTCAAGTGGTCAGTGACACA...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | CAGAGAGACAGTGATTTAGAGGCCAGTCACCAAAAATaGTGGTGTCAGGGTGGGAGGATGACCCCTGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRDSDLEASHQK*WCQGGRMTPDG Trigger: GCCATCAGGGGTCATCCTCCCACCCTGACACCATCATTTTTGGTGACTGGCCTCTAAATCACTGTCTCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | CACCACGGCTTTCTCCCTGATGGAATTTGGTTCTGCTaGGGATGTGGACTGGAAAATGTTCCTGGAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: HHGFLPDGIWFC*GCGLENVPGGM Trigger: CATCCCTCCAGGAACATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | AGCCGTGTCCACCACGGCTTTCTCCCTGATGGAATTTaGTTCTGCTGGGGATGTGGACTGGAAAATGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRVHHGFLPDGI*FCWGCGLENVP Trigger: AGGAACATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGTGGTGGACACGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | GATCTTTACTTTATCTACATGATCTGTCATAGGAGCTaGGGTGGTCGGTACTCAGCCAGGTCCCGCTGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLYFIYMICHRS*GGRYSARSRCE Trigger: CTCGCAGCGGGACCTGGCTGAGTACCGACCACCCCAGCTCCTATGACAGATCATGTAGATAAAGTAAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTGGCAAGGCCCCTAAGTaGATGGAACCGAGTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFGKAPK*MEPSVF Trigger: GAACACACTCGGTTCCATCAACTTAGGGGCCTTGCC...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAGCGCAGACTTCACGCTGGCTCTCTTCACAGATTTGCTTCACTGGCTGTTCCATGAGCTCACTCTaGCTCCTTCTCTTCTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SEAQTSRWLSSQICFTGCSMSSL*LLLFLG Trigger: GCCCAAGAAGAGAAGGAGCAAGAGTGAGCTCATGGA...ACAGCCAGTGAAGCAAATCTGTGAAGAGAGCCAGCGTGAAGTCTGCGCTTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | CGCTGCGAGCATGCAAGCATCAAGCTTGGCTATACTTaGCTCATGTTGATTTACTCATCAGCAGCCTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCEHASIKLGYT*LMLIYSSAAWG Trigger: CCCCCAGGCTGCTGATGAGTAAATCAACATGAGTCAAGTATAGCCAAGCTTGATGCTTGCATGCTCGCAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | TGGTTTCACCGTCACAAAGGGAAGCCTGATGAGTTTTaGTCCCACCCCCAAACTTGTAGTTCAAGGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WFHRHKGKPDEF*SHPQTCSSRTL Trigger: CAGGGTCCTTGAACTACAAGTTTGGGGGTGGGACCAAAACTCATCAGGCTTCCCTTTGTGACGGTGAAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | ACCCTAACTCAAGGAAGCTTGGGTGCGTGCGGTGGGTaGAGGAGTAATATTGAATCTGTAATCCCTCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLTQGSLGACGG*RSNIESVIPPY Trigger: GTAGGGAGGGATTACAGATTCAATATTACTCCTTCACCCACCGCACGCACCCAAGCTTCCTTGAGTTAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | GATCATCGGATGAGGAAAGATGTGCTAAGCCTTCACTaGCTCCAATCTGAACTCTTCCTCCCAGAACCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: DHRMRKDVLSLH*LQSELFLPEPC Trigger: GCAAGGTTCTGGGAGGAAGAGTTCAGATTGGAGCCAGTGAAGGCTTAGCACATCTTTCCTCATCCGATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | TTGGTTCTGCTGGGGATGTGGACTGGAAAATGTTCCTaGAGGGATGCTTTAGCATTGGTTAGCCAGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LVLLGMWTGKCS*RDALALVSQAT Trigger: TGTTGCCTGGCTAACCAATGCTAAAGCATCCCTCCAGGAACATTTTCCAGTCCACATCCCCAGCAGAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR CCA 72 bp | CCTTTTGTGTCCCAGAAGACAGGCAGTCTACTGAGCTaGCTGACTTCCTATTGCCCTGGCAAGTCTCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: PFVSQKTGSLLS*LTSYCPGKSQF Trigger: AAATTGAGACTTGCCAGGGCAATAGGAAGTCAGCCAGCTCAGTAGACTGCCTGTCTTCTGGGACACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR TCA 72 bp | ATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTaGCTCCTGTTCTCACCAAACCACTGTAAGACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVHSLCRLGKGS*LLFSPNHCKTL Trigger: CAGCGTCTTACAGTGGTTTGGTGAGAACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTGTCACTCTCTCACGCTaGGGTAGAATGTTCAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVVTLSR*GRMFSW Trigger: CCAACTGAACATTCTACCCAAGCGTGAGAGAGTGAC...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCTTTCTCCCTGATGGAATTTGGTTCTGCTGGGGATGTGGACTGGAAAATGTGGGACACACACATCTaGTATCTTTTCCTGCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: TAFSLMEFGSAGDVDWKMWDTHI*YLFLQP Trigger: AGGTTGCAGGAAAAGATACAAGATGTGTGTGTCCCA...CATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTTTTTACATTTCCTGCTaGCTATCAGGAGTTCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFFYISC*LSGVPG Trigger: ACCGGGAACTCCTGATAGCAAGCAGGAAATGTAAAA...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTCTGGCTGACTTCCTATaGCCCTGGCAAGTCTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVLADFL*PWQVSI Trigger: AATTGAGACTTGCCAGGGCAATAGGAAGTCAGCCAG...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACGCTGGACAGATCTAACTCCAGGAGGACAACGCCTTTCGGGTACATTTAAGTGTGTTCAAGATTaGATTTGCCAGCCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VRRWTDLTPGGQRLSGTFKCVQD*ICQPLP Trigger: AGGCAGAGGCTGGCAAATCAAATCTTGAACACACTT...AAATGTACCCGAAAGGCGTTGTCCTCCTGGAGTTAGATCTGTCCAGCGTCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTTCTTGCTTTGGGCTCTaGGTCCACTCACACATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVSCFGL*VHSHMK Trigger: TTTCATGTGTGAGTGGACCAAGAGCCCAAAGCAAGA...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTGTTCAGGGAAAGAAAATCTaGCTTTGGGCTCTTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QIHGTQSLQAGKRKLTPVQGKKI*LWALGP Trigger: TGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCTG...AACAGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR GCA 72 bp | CAGCTCCTGGCTCTCCTCCATTACCGATTTTTACTGTaGTTTGGGCTAAATGGGACACACACATCTTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: QLLALLHYRFLL*FGLNGTHTSCI Trigger: GATACAAGATGTGTGTGTCCCATTTAGCCCAAAGCACAGTAAAAATCGGTAATGGAGGAGAGCCAGGAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGAAACGTTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTGATCATAACAGTACAGTTATATaGCACCCTCTTGCCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQKRCAQRIAGPMEATDHNSTVI*HPLAPS Trigger: GGAAGGGGCAAGAGGGTGCAATATAACTGTACTGTT...ATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAACGTTTCTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CAA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTCTTCCTCCCAGAACCTaGCCTCTGCATTTTTACATT | + |
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Preference number: 3 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPLPPRT*PLHFYI Trigger: AATGTAAAAATGCAGAGGCAAGGTTCTGGGAGGAAG...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 72 bp | TTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTaGTCATCGGATGAGGAAAGATGTGCTAAGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LCTKNCWSHGSY*SSDEERCAKPS Trigger: TGAAGGCTTAGCACATCTTTCCTCATCCGATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR TCA 72 bp | ATTGATCCACCAGCTGAGATCTTTACTTTATCTACATaGTCTGTCATAGGAGCTGGGGTGGTCGGTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: IDPPAEIFTLST*SVIGAGVVGTQ Trigger: CTGAGTACCGACCACCCCAGCTCCTATGACAGATCATGTAGATAAAGTAAAGATCTCAGCTGGTGGATCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CAA 90 bp | ACGGCTTTCTCCCTGATGGAATTTGGTTCTGCTGGGGATGTGGACTGGAAAATGACAGCCTTCACAGTGTaGATTACACACAATAAATTC | + |
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Preference number: 3 (lower is better) Translates to: TAFSLMEFGSAGDVDWKMTAFTV*ITHNKF Trigger: GAATTTATTGTGTGTAATCAACACTGTGAAGGCTGT...CATTTTCCAGTCCACATCCCCAGCAGAACCAAATTCCATCAGGGAGAAAGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 72 bp | CCTGGCTCTCCTCCATTACCGATTTTTACTGTGCTTTaGGCTAAATGGGACACACACATCTTGTATCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PGSPPLPIFTVL*AKWDTHILYLF Trigger: GAAAAGATACAAGATGTGTGTGTCCCATTTAGCCCAAAGCACAGTAAAAATCGGTAATGGAGGAGAGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 72 bp | GTGAGTGGAGCTAAGAATGGTCATAAGAAGCACTTTTaGTTTCACCGTCACAAAGGGAAGCCTGATGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: VSGAKNGHKKHF*FHRHKGKPDEF Trigger: AAACTCATCAGGCTTCCCTTTGTGACGGTGAAACCAAAAGTGCTTCTTATGACCATTCTTAGCTCCACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR-3UTR CAA 90 bp | AGACAAATCCATGGTACACAGTCTTTGCAGGCTGGGAAAAGGAAGTTGACTCCTAATGGAGGTGTAATCTaGGATCTTTGTTTCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: RQIHGTQSLQAGKRKLTPNGGVI*DLCFQV Trigger: AACCTGGAAACAAAGATCCAAGATTACACCTCCATT...AGGAGTCAACTTCCTTTTCCCAGCCTGCAAAGACTGTGTACCATGGATTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CCA 72 bp | AGGAGTAATATTGAATCTGTAATCCCTCCCTACTGCTaGACCACACTGTTAAAAGATGTCTATCCACATAGG | + |
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Preference number: 3 (lower is better) Translates to: RSNIESVIPPYC*TTLLKDVYPHR Trigger: CCTATGTGGATAGACATCTTTTAACAGTGTGGTCCAGCAGTAGGGAGGGATTACAGATTCAATATTACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| CDS-3UTR GCA 90 bp | CTGAACACACAGAAGAGGAACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCGAGCTCGGCAGTGGATaGAGCTGTAGGTCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LNTQKRNWPRLHPQGKKIELGSG*SCRSCG Trigger: GCCACAGGACCTACAGCTGCATCCACTGCCGAGCTC...GATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTTCCTCTTCTGTGTGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | GGTGGGAGGATGACCCCTGATGGCAAGGCCCCTAAGTaGATGGAACCGAGTGTGTTCAGTCACTCTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: GGRMTPDGKAPK*MEPSVFSHSLT Trigger: CGTGAGAGAGTGACTGAACACACTCGGTTCCATCAACTTAGGGGCCTTGCCATCAGGGGTCATCCTCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| CDS-3UTR GCA 90 bp | TGCCTCTGCATTTTTACATTTCCTGCTTGCTATCAGGAGTTCCCGGTCCACAGCCAACACCCGCTCTTCTaGAGGCCCACAGCCCACATT | + |
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Preference number: 4 (lower is better) Translates to: CLCIFTFPACYQEFPVHSQHPLF*RPTAHI Trigger: AATGTGGGCTGTGGGCCTGCAGAAGAGCGGGTGTTG...GCTGTGGACCGGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATGCAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | AACTGGCCGCGGCTCCACCCTCAGGGAAAGAAAATCTaGCTTTGGGCTCTTGGTCCACTCACACATGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: NWPRLHPQGKKI*LWALGPLTHEN Trigger: GTTTTCATGTGTGAGTGGACCAAGAGCCCAAAGCAAGATTTTCTTTCCCTGAGGGTGGAGCCGCGGCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | GAATGTGAAACTGGAGAAATGTGTGTCACTGACCACTaGAGCCTGGGAGTCACGGGTAGTTTTTCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ECETGEMCVTDH*SLGVTGSFSGP Trigger: AGGGCCAGAAAAACTACCCGTGACTCCCAGGCTCAAGTGGTCAGTGACACACATTTCTCCAGTTTCACATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | TGGACTGGAAAATGTTCCTGGAGGGATGCTTTAGCATaGGTTAGCCAGGCAACAGGCTCTTATCTCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: WTGKCSWRDALA*VSQATGSYLHE Trigger: CTCATGGAGATAAGAGCCTGTTGCCTGGCTAACCAATGCTAAAGCATCCCTCCAGGAACATTTTCCAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| CDS-3UTR TCA 90 bp | TGCCTCTGCATTTTTACATTTCCTGCTTGCTATCAGGAGTTCCCGGTCCACAGCCCCAGCCATTGTCCTTaGTCATGTGTGCTAATTCAA | + |
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Preference number: 4 (lower is better) Translates to: CLCIFTFPACYQEFPVHSPSHCP*SCVLIQ Trigger: TTGAATTAGCACACATGATCAAGGACAATGGCTGGG...GCTGTGGACCGGGAACTCCTGATAGCAAGCAGGAAATGTAAAAATGCAGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| CDS-3UTR TCA 90 bp | ACTCAGAAACGTTGTGCACAAAGAATTGCTGGTCCCATGGAAGCTACTGATCATGAGGGTAGGTATGCCTaGAAAGTCTTGGATCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: TQKRCAQRIAGPMEATDHEGRYA*KVLDLV Trigger: GACAAGATCCAAGACTTTTCAGGCATACCTACCCTC...ATGATCAGTAGCTTCCATGGGACCAGCAATTCTTTGTGCACAACGTTTCTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | CATAGGAGAGTCAGGGCTAAGAATGGAGGTGTAATCTaGGATCTTTGTTTCCAGGTTATGGTGATAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: HRRVRAKNGGVI*DLCFQVMVIKL Trigger: CAATTTTATCACCATAACCTGGAAACAAAGATCCAAGATTACACCTCCATTCTTAGCCCTGACTCTCCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | ACACACACACACTCTCTCTCTGTCTATTCCAATTTCTaGGAAGTTCTCCCAACTACAGTAATTACTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: THTHSLSVYSNF*EVLPTTVITLK Trigger: CTTCAGAGTAATTACTGTAGTTGGGAGAACTTCCAAGAAATTGGAATAGACAGAGAGAGAGTGTGTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| 3UTR CAA 72 bp | TTTACTGTGCTTTGGGCTAAATGGGACACACACATCTaGTATCTTTTCCTGCAACCTAAATCAGTTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FTVLWAKWDTHI*YLFLQPKSVKK Trigger: CTTCTTAACTGATTTAGGTTGCAGGAAAAGATACAAGATGTGTGTGTCCCATTTAGCCCAAAGCACAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018571.5 |
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| CDS CCA 90 bp | AGCTGTAGGTCCTGTGGCAGGAGGGTAGGTATGCCTGAAAAGTCTTaGATCTTGTCATCTTCACCATTGGCGCTGCTGAGCGTGGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SCRSCGRRVGMPEKS*ILSSSPLALLSVGQ Trigger: TTGCCCCACGCTCAGCAGCGCCAATGGTGAAGATGACAAGATCCAAGACTTTTCAGGCATACCTACCCTCCTGCCACAGGACCTACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238921.2 |
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| CDS CCA 72 bp | AAACTCCGGGGCAGCCCACGAGGCACTCCCACAGGATaGGTCGCACGGGAAACAGCGAAAGACACAGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: KLRGSPRGTPTG*VARETAKDTGK Trigger: TTTACCTGTGTCTTTCGCTGTTTCCCGTGCGACCCATCCTGTGGGAGTGCCTCGTGGGCTGCCCCGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238921.2 |
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| CDS GCA 72 bp | GTTCGTCGTGATTGGCCAAGTGAGCTCGGCAGTGGATaGAGCTGTAGGTCCTGTGGCAGGAGGGTAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: VRRDWPSELGSG*SCRSCGRRVGM Trigger: CATACCTACCCTCCTGCCACAGGACCTACAGCTGCATCCACTGCCGAGCTCACTTGGCCAATCACGACGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018571.5 ENSMUST00000238921.2 |
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| CDS CAA 90 bp | AGGTCCTGTGGCAGGAGGGTAGGTATGCCTGAAAAGTCTTGGATCTaGTCATCTTCACCATTGGCGCTGCTGAGCGTGGGGCAAACTCCG | + |
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Preference number: 6 (lower is better) Translates to: RSCGRRVGMPEKSWI*SSSPLALLSVGQTP Trigger: CGGAGTTTGCCCCACGCTCAGCAGCGCCAATGGTGAAGATGACAAGATCCAAGACTTTTCAGGCATACCTACCCTCCTGCCACAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238921.2 |
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| CDS CAA 72 bp | GGCAGGAGGGTAGGTATGCCTGAAAAGTCTTGGATCTaGTCATCTTCACCATTGGCGCTGCTGAGCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRRVGMPEKSWI*SSSPLALLSVG Trigger: CCCCACGCTCAGCAGCGCCAATGGTGAAGATGACAAGATCCAAGACTTTTCAGGCATACCTACCCTCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238921.2 |
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