Pregenerated sensors for YPEL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022773Ensembl transcript IDs: ENSMUST00000035682.16, ENSMUST00000231394.2, ENSMUST00000232574.2, ENSMUST00000239090.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTCCTGCTGTTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTaGAGTCAGCCTTGCTCAGCAGCCGACACCTGTCCCCAGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LVLLFLVNSLWVPQH*SQPCSAADTCPQGR Trigger: CCTGCCCTGGGGACAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAACAGCAGGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR GCA 90 bp | TTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTaGTCAGCAGCCGACACCTGTCCCCAGGGCAGGCAGCTGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: FLVNSLWVPQHCSQP*SAADTCPQGRQLCP Trigger: AGGACACAGCTGCCTGCCCTGGGGACAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR CCA 90 bp | GTTTGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTGAACTCCCTGTaGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCAGCCGACACC | + |
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Preference number: 1 (lower is better) Translates to: VCSSLLVLLFLVNSL*VPQHCSQPCSAADT Trigger: GGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR TCA 90 bp | CAAGGCGCTCTGTTTGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTaGACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QGALFARACWSCCSW*TPCGFHSTAVSLAQ Trigger: CTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR TCA 90 bp | CCACTGGGGAAAGCCGCCCATGCCTCAGCCACCAAGTTCCCACTCTaGAAAGTATTAAAAACTAGCCAGGCGGGCATGTCCAGTTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: PLGKAAHASATKFPL*KVLKTSQAGMSSLS Trigger: GCTCAAACTGGACATGCCCGCCTGGCTAGTTTTTAATACTTTTCAGAGTGGGAACTTGGTGGCTGAGGCATGGGCGGCTTTCCCCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | CAAGGGCTCTCAGCCTTCACAGGCCTACTGCCTGCCCTTCTGCCCTaGGGAGGGTACAAAACAATGAAACTTATCTGGGAATGGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: QGLSAFTGLLPALLP*GGYKTMKLIWEWFW Trigger: CCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGGCAGTAGGCCTGTGAAGGCTGAGAGCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 90 bp | CAGGCCTACTGCCTGCCCTTCTGCCCTGGGGAGGGTACAAAACAATaGAACTTATCTGGGAATGGTTCTGGCCTCCATCCTCTCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: QAYCLPFCPGEGTKQ*NLSGNGSGLHPLCK Trigger: TTTGCAGAGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGGCAGTAGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | CCTGCCCTTCTGCCCTGGGGAGGGTACAAAACAATGAAACTTATCTaGGAATGGTTCTGGCCTCCATCCTCTCTGCAAATTGGCCACTCC | + |
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Preference number: 1 (lower is better) Translates to: PALLPWGGYKTMKLI*EWFWPPSSLQIGHS Trigger: GGAGTGGCCAATTTGCAGAGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR GCA 90 bp | ACTGTTGACCAGTGTTCATTCCTAGATAAGGATGGCCCTGAGCCTTaGCAAGGTCACACGGCTGCTTGTGCTGAGTTTCAGCACTTACCT | + |
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Preference number: 1 (lower is better) Translates to: TVDQCSFLDKDGPEP*QGHTAACAEFQHLP Trigger: AGGTAAGTGCTGAAACTCAGCACAAGCAGCCGTGTGACCTTGGCAAGGCTCAGGGCCATCCTTATCTAGGAATGAACACTGGTCAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR GCA 90 bp | GAGGTGAGACATTCAGTGGTTTACCAGCATGCCTGGTTGTGGTCTTaGATCACTTACCCTGAAGCCAGCTCATGGTCAGTTCTTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: EVRHSVVYQHAWLWS*ITYPEASSWSVLLV Trigger: AACCAAAAGAACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | TGTAAGGAGGTGAGACATTCAGTGGTTTACCAGCATGCCTGGTTGTaGTCTTGCATCACTTACCCTGAAGCCAGCTCATGGTCAGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: CKEVRHSVVYQHAWL*SCITYPEASSWSVL Trigger: AAGAACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTCCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | TACAAATGTAAGGAGGTGAGACATTCAGTGGTTTACCAGCATGCCTaGTTGTGGTCTTGCATCACTTACCCTGAAGCCAGCTCATGGTCA | + |
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Preference number: 1 (lower is better) Translates to: YKCKEVRHSVVYQHA*LWSCITYPEASSWS Trigger: TGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTCCTTACATTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | CAGGCATTTCCTGTATTACCAGCCTTCCAATCTTGGGCAAAGAAATaGCACCAAAATGTAGGTTTTGAAGTGAAGAGGAGTAGCGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: QAFPVLPAFQSWAKK*HQNVGFEVKRSSEC Trigger: GCACTCGCTACTCCTCTTCACTTCAAAACCTACATTTTGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGTAATACAGGAAATGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 90 bp | ACCAGCATTGCGCAGGCATTTCCTGTATTACCAGCCTTCCAATCTTaGGCAAAGAAATGGCACCAAAATGTAGGTTTTGAAGTGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TSIAQAFPVLPAFQS*AKKWHQNVGFEVKR Trigger: CCTCTTCACTTCAAAACCTACATTTTGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGTAATACAGGAAATGCCTGCGCAATGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 90 bp | AGTGGTTTACCAGCATGCCTGGTTGTGGTCTTGCATCACTTACCCTaGAGCCAGCTCATGGTCAGTTCTTTTGGTTTATATTTCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: SGLPACLVVVLHHLP*SQLMVSSFGLYFTE Trigger: TTCTGTGAAATATAAACCAAAAGAACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR GCA 90 bp | CTTCTACATCAGGAACCTCCCTATTTGCTTAAGATGTACACTGAATaGTTGCTTCCTAGCTTCTCTTCCATGTTACCAGTGGCTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLHQEPPYLLKMYTE*LLPSFSSMLPVAGF Trigger: GAAACCAGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAAGCATTCAGTGTACATCTTAAGCAAATAGGGAGGTTCCTGATGTAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 90 bp | GACAACAAGGAAATAAACCACATTTCTAAAGCAAAGTGGCGTTCATaGCCTGGTATCACCTCCCACTGTTCTGAGGAAACCTCTTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: DNKEINHISKAKWRS*PGITSHCSEETSLK Trigger: TTTTAAAGAGGTTTCCTCAGAACAGTGGGAGGTGATACCAGGTCATGAACGCCACTTTGCTTTAGAAATGTGGTTTATTTCCTTGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | AGCGAGTGCCTGTGCTGGCCAGAGGATGTGGGTTTAGCAGGTCTGGGGCTGGAGCCTGGGCTTGGGGGATaGCCCAGATCCTCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SECLCWPEDVGLAGLGLEPGLGG*PRSSLV Trigger: GACAAGGGAGGATCTGGGCCATCCCCCAAGCCCAGG...CTCCAGCCCCAGACCTGCTAAACCCACATCCTCTGGCCAGCACAGGCACTCGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CAA 90 bp | GTTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTaGCTCAGCAGCCGACACCTGTCCCCAGGGCAGGCAGCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VLGELPVGSTALQSA*LSSRHLSPGQAAVS Trigger: GGACACAGCTGCCTGCCCTGGGGACAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR CAA 90 bp | AGCTCTAGAGCAGCCGGTGCTAAGCGCTTTCCTGTAATGCTGCCTTaGCAGCTCAAGGGCTCTCAGCCTTCACAGGCCTACTGCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSRAAGAKRFPVMLP*QLKGSQPSQAYCLP Trigger: GGGCAGGCAGTAGGCCTGTGAAGGCTGAGAGCCCTTGAGCTGCAAAGGCAGCATTACAGGAAAGCGCTTAGCACCGGCTGCTCTAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | GGCATCTATAAGGACGTACTCGGGTCTGTCTCCCTTGCCGCCTTCCCACTGGGGAGCGAGTGCCTGTGCTaGCCAGAGGATGTGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GIYKDVLGSVSLAAFPLGSECLC*PEDVGL Trigger: TAAACCCACATCCTCTGGCCAGCACAGGCACTCGCT...CCCCAGTGGGAAGGCGGCAAGGGAGACAGACCCGAGTACGTCCTTATAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCACAGACCACCAGGGCTTaGATTTCCATGGGTCGGTTG | + |
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Preference number: 2 (lower is better) Translates to: FLVNSLWVPQHCSQPCSAQTTRA*ISMGRL Trigger: CAACCGACCCATGGAAATGCAAGCCCTGGTGGTCTG...TGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTCCTCCAGCACAGAGGACAGACCACCAGGGCTTGCATTTCCATGGGTCGGTGTTGAGACTGGGCTaGCCTGTGAGGTTAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SCPPAQRTDHQGLHFHGSVLRLG*PVRLSS Trigger: TGAACTTAACCTCACAGGCCAGCCCAGTCTCAACAC...CGACCCATGGAAATGCAAGCCCTGGTGGTCTGTCCTCTGTGCTGGAGGACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR CAA 90 bp | TTTATTTTATACCTCCCACAGACACGCCACAGAGGGCTGACAGCTTaGGCTAGGAGACAGGGAGGCCAAGGCGCTCTGTTTGCTCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: FILYLPQTRHRGLTA*ARRQGGQGALFARA Trigger: AGCTCGAGCAAACAGAGCGCCTTGGCCTCCCTGTCTCCTAGCCAAAGCTGTCAGCCCTCTGTGGCGTGTCTGTGGGAGGTATAAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR CAA 90 bp | TGGGCACCTTACCAAGTGGATAGCCTAGAGAGACACCTTCAAGTGTaGAGACTGGGCTGGCCTGTGAGGTTAAGTTCAAGAAGCATTGTC | + |
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Preference number: 2 (lower is better) Translates to: WAPYQVDSLERHLQV*RLGWPVRLSSRSIV Trigger: GACAATGCTTCTTGAACTTAACCTCACAGGCCAGCCCAGTCTCAACACTTGAAGGTGTCTCTCTAGGCTATCCACTTGGTAAGGTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CAA 90 bp | AAATGTAAGGAGGTGAGACATTCAGTGGTTTACCAGCATGCCTGGTaGTGGTCTTGCATCACTTACCCTGAAGCCAGCTCATGGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KCKEVRHSVVYQHAW*WSCITYPEASSWSV Trigger: AACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTCCTTACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTCCATGTTACCAGTGGCTGGTTTCAGTTTTTGGAGACATGCTTTACTTGGGACTTGGGCTTGGTaGGAACACAGCCAGGCATTG | + |
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Preference number: 2 (lower is better) Translates to: FSSMLPVAGFSFWRHALLGTWAW*EHSQAL Trigger: CAATGCCTGGCTGTGTTCTCACCAAGCCCAAGTCCC...AAGTAAAGCATGTCTCCAAAAACTGAAACCAGCCACTGGTAACATGGAAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCTGTATTACCAGCCTTCCAATCTTGGGCAAAGAAATGGCACCAAAATGTCAGCCTGTTGCTCTGTaGCAGGGACCAGCCCTACAT | + |
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Preference number: 2 (lower is better) Translates to: ISCITSLPILGKEMAPKCQPVAL*QGPALH Trigger: ATGTAGGGCTGGTCCCTGCCACAGAGCAACAGGCTG...ACATTTTGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGTAATACAGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCCCAAAGGTCTAGATAGAAACTGCTTTTTGACTACCACACCCAGGCAGAAACTTATCTGGGAATaGTTCTGGCCTCCATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LEPKGLDRNCFLTTTPRQKLIWE*FWPPSS Trigger: AGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTT...CTGCCTGGGTGTGGTAGTCAAAAAGCAGTTTCTATCTAGACCTTTGGGCTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTCCTAGCTTCTCTTCCATGTTACCAGTGGCTGGTTTCAGTTTTTGGAGAGTGTTGAGACTGGGCTaGCCTGTGAGGTTAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLPSFSSMLPVAGFSFWRVLRLG*PVRLSS Trigger: TGAACTTAACCTCACAGGCCAGCCCAGTCTCAACAC...TCTCCAAAAACTGAAACCAGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR TCA 90 bp | CAATCTTGGGCAAAGAAATGGCACCAAAATGTAGGTTTTGAAGTGAAGAGGAGTTATTCACTAGGCAGGTaGGTCACCAGCTGGTCAATT | + |
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Preference number: 2 (lower is better) Translates to: QSWAKKWHQNVGFEVKRSYSLGR*VTSWSI Trigger: AATTGACCAGCTGGTGACTCACCTGCCTAGTGAATA...ACTCCTCTTCACTTCAAAACCTACATTTTGGTGCCATTTCTTTGCCCAAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAGGGTACAAAACAATGAAACTTATCTGGGAATGGTTCTGGCCTCCATCCACTCTTCCTTTACCTTaGAAAACTCTCATGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: WGGYKTMKLIWEWFWPPSTLPLP*KTLMFC Trigger: GCAAAACATGAGAGTTTTCCAAGGTAAAGGAAGAGT...GGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR GCA 90 bp | GTACAAAACAATGAAACTTATCTGGGAATGGTTCTGGCCTCCATCCTCTCTGCAGCTCTGGCCTCTGTATaGATAACTATTTCAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: VQNNETYLGMVLASILSAALASV*ITISST Trigger: TGTACTTGAAATAGTTATGCATACAGAGGCCAGAGC...TGCAGAGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR TCA 90 bp | AAGTCATATAGAGTACTAGCAAAAACGTTCCAGTCAGAGCTCTCACAAAAGATAATAGAAACTGCTTTTTaGCTACCACACCCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KSYRVLAKTFQSELSQKIIETAF*LPHPGS Trigger: GCTGCCTGGGTGTGGTAGTCAAAAAGCAGTTTCTAT...TATCTTTTGTGAGAGCTCTGACTGGAACGTTTTTGCTAGTACTCTATATGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 72 bp | GCCTGTTGCTCTGTGGCAGGGACCAGCCCTACATTCTaGGCCGCTGTGCTGCCGCAGCACCAAGGGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ACCSVAGTSPTF*AAVLPQHQGSQ Trigger: CTGACTCCCTTGGTGCTGCGGCAGCACAGCGGCTCAGAATGTAGGGCTGGTCCCTGCCACAGAGCAACAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR GCA 72 bp | AACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTaGTCAGCAGCCGACACCTGTCCCCAGGGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: NSLWVPQHCSQP*SAADTCPQGRQ Trigger: CTGCCTGCCCTGGGGACAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR CCA 72 bp | ACGTACTCGGGTCTGTCTCCCTTGCCGCCTTCCCACTaGGGAAAGCCGCCCATGCCTCAGCCACCAAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TYSGLSPLPPSH*GKPPMPQPPSS Trigger: GGAACTTGGTGGCTGAGGCATGGGCGGCTTTCCCCAGTGGGAAGGCGGCAAGGGAGACAGACCCGAGTACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR GCA 72 bp | CTGTTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTaGAGTCAGCCTTGCTCAGCAGCCGACACCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LFLVNSLWVPQH*SQPCSAADTCP Trigger: GGGACAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR-3UTR CAA 90 bp | AACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCAGCCGACACCAGACACCTTCAAGTGTaGAGACTGGGCTGGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: NSLWVPQHCSQPCSAADTRHLQV*RLGWPV Trigger: CACAGGCCAGCCCAGTCTCAACACTTGAAGGTGTCT...GGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTATAAGGACGTACTCGGGTCTGTCTCCCTTGCCGCCTTCCCACTGGGGCCTGTAATGCTGCCTTaGCAGCTCAAGGGCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GIYKDVLGSVSLAAFPLGPVMLP*QLKGSQ Trigger: CTGAGAGCCCTTGAGCTGCAAAGGCAGCATTACAGG...CCCCAGTGGGAAGGCGGCAAGGGAGACAGACCCGAGTACGTCCTTATAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 72 bp | CTGTTTGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTaGACTCCCTGTGGGTTCCACAGCACTGCAGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LFARACWSCCSW*TPCGFHSTAVS Trigger: GCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| 3UTR GCA 72 bp | AGCTCAAGGGCTCTCAGCCTTCACAGGCCTACTGCCTaGCCTTCTGCCCTGGGGAGGGTACAAAACAATGAA | + |
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Preference number: 3 (lower is better) Translates to: SSRALSLHRPTA*PSALGRVQNNE Trigger: TTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGGCAGTAGGCCTGTGAAGGCTGAGAGCCCTTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR CCA 72 bp | GGTTTTGAAGTGAAGAGGAGTAGCGAGTGCCTGTGCTaGCCAGAGGATGTGGGTTTAGCAGGTCTGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GFEVKRSSECLC*PEDVGLAGLGL Trigger: CAGCCCCAGACCTGCTAAACCCACATCCTCTGGCCAGCACAGGCACTCGCTACTCCTCTTCACTTCAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CAA 90 bp | AAGCGCTTTCCTGTAATGCTGCCTTTGCAGCTCAAGGGCTCTCAGCCTTCACAGAGACACCTTCAAGTGTaGAGACTGGGCTGGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: KRFPVMLPLQLKGSQPSQRHLQV*RLGWPV Trigger: CACAGGCCAGCCCAGTCTCAACACTTGAAGGTGTCT...CTGTGAAGGCTGAGAGCCCTTGAGCTGCAAAGGCAGCATTACAGGAAAGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTATAAGGACGTACTCGGGTCTGTCTCCCTTGCCGCCTTCCCACTGGGGGAAAACTCTCATGTTTaGCAGTTTCCCGTACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GIYKDVLGSVSLAAFPLGENSHV*QFPVLA Trigger: AGCCAGTACGGGAAACTGCAAAACATGAGAGTTTTC...CCCCAGTGGGAAGGCGGCAAGGGAGACAGACCCGAGTACGTCCTTATAGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 72 bp | GGGATGGCCCAGATCCTCCCTTGTCAGGTCATGAGGTaGTTCCAGGCAGAAAAGGTAGCTCCCATACTAAGC | + |
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Preference number: 3 (lower is better) Translates to: GMAQILPCQVMR*FQAEKVAPILS Trigger: GCTTAGTATGGGAGCTACCTTTTCTGCCTGGAATCACCTCATGACCTGACAAGGGAGGATCTGGGCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| 3UTR TCA 72 bp | TGCCTGCCCTTCTGCCCTGGGGAGGGTACAAAACAATaGAACTTATCTGGGAATGGTTCTGGCCTCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLPFCPGEGTKQ*NLSGNGSGLHP Trigger: AGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | TCAGCCTTCACAGGCCTACTGCCTGCCCTTCTGCCCTaGGGAGGGTACAAAACAATGAAACTTATCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SAFTGLLPALLP*GGYKTMKLIWE Trigger: TTCCCAGATAAGTTTCATTGTTTTGTACCCTCCCCAGGGCAGAAGGGCAGGCAGTAGGCCTGTGAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | AGAGGGAAACTGGAAGTAGCTGGGGAAAAAGCAGCTTaGGCTAGGACCAGCATTGCGCAGGCATTTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RGKLEVAGEKAA*ARTSIAQAFPV Trigger: TACAGGAAATGCCTGCGCAATGCTGGTCCTAGCCCAAGCTGCTTTTTCCCCAGCTACTTCCAGTTTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | GTGAGACATTCAGTGGTTTACCAGCATGCCTGGTTGTaGTCTTGCATCACTTACCCTGAAGCCAGCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: VRHSVVYQHAWL*SCITYPEASSW Trigger: CCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | AAGGAGGTGAGACATTCAGTGGTTTACCAGCATGCCTaGTTGTGGTCTTGCATCACTTACCCTGAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KEVRHSVVYQHA*LWSCITYPEAS Trigger: GCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTTGGGCAAAGAAATGGCACCAAAATGTAGGTTTTGAAGTGAAGAGGAGTTCTGAGAGCCTGGGCTaGGGGGATGGCCCAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QSWAKKWHQNVGFEVKRSSESLG*GDGPDP Trigger: AGGATCTGGGCCATCCCCCAAGCCCAGGCTCTCAGA...ACTCCTCTTCACTTCAAAACCTACATTTTGGTGCCATTTCTTTGCCCAAGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | CAAAATGTAGGTTTTGAAGTGAAGAGGAGTAGCGAGTaGCTGTGCTGGCCAGAGGATGTGGGTTTAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QNVGFEVKRSSE*LCWPEDVGLAG Trigger: ACCTGCTAAACCCACATCCTCTGGCCAGCACAGGCACTCGCTACTCCTCTTCACTTCAAAACCTACATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | CATTCAGTGGTTTACCAGCATGCCTGGTTGTGGTCTTaGATCACTTACCCTGAAGCCAGCTCATGGTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HSVVYQHAWLWS*ITYPEASSWSV Trigger: AACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | AGCCTAGAGAGACACCTTCAAGTGTTGAGACTGGGCTaGCCTGTGAGGTTAAGTTCAAGAAGCATTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SLERHLQVLRLG*PVRLSSRSIVT Trigger: GGTGACAATGCTTCTTGAACTTAACCTCACAGGCCAGCCCAGTCTCAACACTTGAAGGTGTCTCTCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035682.16 ENSMUST00000231394.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTCCTAGCTTCTCTTCCATGTTACCAGTGGCTGGTTTCAGTTTTTGGAGATTTAGGGACTTGGGCTaGGTGAGAACACAGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPSFSSMLPVAGFSFWRFRDLG*VRTQPG Trigger: GCCTGGCTGTGTTCTCACCAAGCCCAAGTCCCTAAA...TCTCCAAAAACTGAAACCAGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTTGGGCAAAGAAATGGCACCAAAATGTAGGTTTTGAAGTGAAGAGGAGTAGCTCAGTGGCAGACTaGGGTAGCCCTGGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSWAKKWHQNVGFEVKRSSSVAD*GSPGTE Trigger: CTCTGTCCCAGGGCTACCCAAGTCTGCCACTGAGCT...ACTCCTCTTCACTTCAAAACCTACATTTTGGTGCCATTTCTTTGCCCAAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | CTTCTGGTAACTATGCCTTTGCTTGTGAGGAGACCTTaGTTCTCTGCTTTTAGGGACTTGGGCTTGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLVTMPLLVRRP*FSAFRDLGLVR Trigger: TCTCACCAAGCCCAAGTCCCTAAAAGCAGAGAAGCAAGGTCTCCTCACAAGCAAAGGCATAGTTACCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | GTTCCAGTCAGAGCTCTCACAAAAGATAATACAGAGTaGTCAGTTGAGGGGCAGATAGCATGCCCAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPVRALTKDNTE*SVEGQIACPEH Trigger: ATGCTCTGGGCATGCTATCTGCCCCTCAACTGAGCACTCTGTATTATCTTTTGTGAGAGCTCTGACTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR TCA 72 bp | CCAGCATGCCTGGTTGTGGTCTTGCATCACTTACCCTaGAGCCAGCTCATGGTCAGTTCTTTTGGTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PACLVVVLHHLP*SQLMVSSFGLY Trigger: ATATAAACCAAAAGAACTGACCATGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR TCA 72 bp | GTGGCGTTCATGACCTGGTATCACCTCCCACTGTTCTaGGGAAACCTCTTTAAAATAGTCACAGAATGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VAFMTWYHLPLF*GNLFKIVTEWC Trigger: GCACCATTCTGTGACTATTTTAAAGAGGTTTCCTCAGAACAGTGGGAGGTGATACCAGGTCATGAACGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR TCA 72 bp | TATACAGAAGACTTCTCCAAGACTCTTCAGCTTTACTaGGGCATCTATAAGGACGTACTCGGGTCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YTEDFSKTLQLY*GIYKDVLGSVS Trigger: GGAGACAGACCCGAGTACGTCCTTATAGATGCCTCAGTAAAGCTGAAGAGTCTTGGAGAAGTCTTCTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | CTAACTCTTCCTTTACCTTGGAAAACTCTCATGTTTTaGAGTTTCCCGTACTGGCTCTGGCCTCTGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTLPLPWKTLMF*SFPYWLWPLYA Trigger: TGCATACAGAGGCCAGAGCCAGTACGGGAAACTGCAAAACATGAGAGTTTTCCAAGGTAAAGGAAGAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | GGGTACAAAACAATGAAACTTATCTGGGAATGGTTCTaGCCTCCATCCTCTCTGCAAATTGGCCACTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GYKTMKLIWEWF*PPSSLQIGHSL Trigger: TAAGGAGTGGCCAATTTGCAGAGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGTTTTGTACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR TCA 72 bp | AGTCACAGAATGGTGCTGTTTACAAATGTAAGGAGGTaGGACATTCAGTGGTTTACCAGCATGCCTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SHRMVLFTNVRR*DIQWFTSMPGC Trigger: ACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTCCTTACATTTGTAAACAGCACCATTCTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR TCA 72 bp | GAAATAAACCACATTTCTAAAGCAAAGTGGCGTTCATaGCCTGGTATCACCTCCCACTGTTCTGAGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: EINHISKAKWRS*PGITSHCSEET Trigger: GGTTTCCTCAGAACAGTGGGAGGTGATACCAGGTCATGAACGCCACTTTGCTTTAGAAATGTGGTTTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | AACCTCCCTATTTGCTTAAGATGTACACTGAATGCTTaGTTCCTAGCTTCTCTTCCATGTTACCAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NLPICLRCTLNA*FLASLPCYQWL Trigger: CAGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAAGCATTCAGTGTACATCTTAAGCAAATAGGGAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | GGTAGCTCCCATACTAAGCTAACTCTTCCTTTACCTTaGAAAACTCTCATGTTTTGCAGTTTCCCGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSHTKLTLPLP*KTLMFCSFPYW Trigger: CCAGTACGGGAAACTGCAAAACATGAGAGTTTTCCAAGGTAAAGGAAGAGTTAGCTTAGTATGGGAGCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR GCA 72 bp | CATGTTACCAGTGGCTGGTTTCAGTTTTTGGAGACATaGTTTACTTCTGGTAACTATGCCTTTGCTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HVTSGWFQFLET*FTSGNYAFACE Trigger: CTCACAAGCAAAGGCATAGTTACCAGAAGTAAAGCATGTCTCCAAAAACTGAAACCAGCCACTGGTAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | AATGCTTGCTTCCTAGCTTCTCTTCCATGTTACCAGTaGCTGGTTTCAGTTTTTGGAGACATGCTTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NACFLASLPCYQ*LVSVFGDMLYF Trigger: GAAGTAAAGCATGTCTCCAAAAACTGAAACCAGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAAGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCATATAGAGTACTAGCAAAAACGTTCCAGTCAGAGCTCTCACAAAAGATAACCAGCCTTCCAATCTaGGGCAAAGAAATGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: KSYRVLAKTFQSELSQKITSLPI*GKEMAP Trigger: TGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGT...TATCTTTTGTGAGAGCTCTGACTGGAACGTTTTTGCTAGTACTCTATATGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CCA 72 bp | TTCTCTTCCATGTTACCAGTGGCTGGTTTCAGTTTTTaGAGACATGCTTTACTTCTGGTAACTATGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSSMLPVAGFSF*RHALLLVTMPL Trigger: CAAAGGCATAGTTACCAGAAGTAAAGCATGTCTCCAAAAACTGAAACCAGCCACTGGTAACATGGAAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR GCA 90 bp | GCTAGGAGACAGGGAGGCCAAGGCGCTCTGTTTGCTCGAGCTTGCTGGTCCTGCTGGCCAGATGGGCTCTaGAGTGGATGCAGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRQGGQGALFARACWSCWPDGL*SGCSCK Trigger: CTTACAGCTGCATCCACTGCAGAGCCCATCTGGCCA...GCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTGGCCTCCCTGTCTCCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | GAGACAGGGAGGCCAAGGCGCTCTGTTTGCTCGAGCTaGCTGGTCCTGCTGTTCTTGGTGAACTCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETGRPRRSVCSS*LVLLFLVNSLW Trigger: CCACAGGGAGTTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTGGCCTCCCTGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | TACCTCCCACAGACACGCCACAGAGGGCTGACAGCTTaGGCTAGGAGACAGGGAGGCCAAGGCGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTRHRGLTA*ARRQGGQGALF Trigger: AAACAGAGCGCCTTGGCCTCCCTGTCTCCTAGCCAAAGCTGTCAGCCCTCTGTGGCGTGTCTGTGGGAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCAGCCGACACCTGGAGATAAGCTCATCGTaGTTGGCCAGATGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVGSTALQSALLSSRHLEISSS*LARWAL Trigger: CAGAGCCCATCTGGCCAATCACGATGAGCTTATCTC...CAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCTATAAGGACGTACTCGGGTCTGTCTCCCTTGCCGCCTTCCCACTGGGGCATTCACCACAGAGTTaGAGAGGTAGGCTCGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GIYKDVLGSVSLAAFPLGHSPQS*RGRLAP Trigger: AGGGGCGAGCCTACCTCTTCAACTCTGTGGTGAATG...CCCCAGTGGGAAGGCGGCAAGGGAGACAGACCCGAGTACGTCCTTATAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAAGGCGCTCTGTTTGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTGAACGCCCCTGGCTTCCCTaGAAGGACTTGGAGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAKALCLLELAGPAVLGERPWLP*KDLEIS Trigger: GCTTATCTCCAAGTCCTTTCAGGGAAGCCAGGGGCG...TTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCAGCCGACACCTGACCAGCCGTTGTCTTTaGTCATGTGGGCAAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPVGSTALQSALLSSRHLTSRCL*SCGQVQ Trigger: TTGAACTTGCCCACATGATCAAAGACAACGGCTGGT...CAGGTGTCGGCTGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | CTTTGGCTAGGAGACAGGGAGGCCAAGGCGCTCTGTTaGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWLGDREAKALC*LELAGPAVLGE Trigger: TTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTGGCCTCCCTGTCTCCTAGCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| CDS-3UTR CCA 90 bp | AGCGAGTGCCTGTGCTGGCCAGAGGATGTGGGTTTAGCAGGTCTGGGGCTGGAGAGTTCGGTGACAGTGTaGCAGATAAGCTTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SECLCWPEDVGLAGLGLESSVTV*QISLES Trigger: ACTTTCCAAGCTTATCTGCCACACTGTCACCGAACT...CTCCAGCCCCAGACCTGCTAAACCCACATCCTCTGGCCAGCACAGGCACTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CAA 72 bp | TCCTGTCCTCCAGCACAGAGGACAGACCACCAGGGCTaGCATTTCCATGGGTCGGTTGTCTATAGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPPAQRTDHQG*HFHGSVVYSKW Trigger: CCACTTGCTATAGACAACCGACCCATGGAAATGCAAGCCCTGGTGGTCTGTCCTCTGTGCTGGAGGACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | CTTGTGAGGAGACCTTGCTTCTCTGCTTTTAGGGACTaGGGCTTGGTGAGAACACAGCCAGGCATTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRRPCFSAFRD*GLVRTQPGIAG Trigger: GCCTGCAATGCCTGGCTGTGTTCTCACCAAGCCCAAGTCCCTAAAAGCAGAGAAGCAAGGTCTCCTCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCCTTGCTCAGCAGCCGACACCTGTCCCCAGGGCAGGCAGCTGTGTCCTAAGCTTGGAAAGTTTTaGACTTGGTCATTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPCSAADTCPQGRQLCPKLGKF*TWSFSP Trigger: TGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTT...AGGACACAGCTGCCTGCCCTGGGGACAGGTGTCGGCTGCTGAGCAAGGCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | CAAGTACATCCAGGGTATAAAGTGAAACCCAGCCTGTaGCTCTGTGGCAGGGACCAGCCCTACATTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVHPGYKVKPSL*LCGRDQPYILS Trigger: GCTCAGAATGTAGGGCTGGTCCCTGCCACAGAGCAACAGGCTGGGTTTCACTTTATACCCTGGATGTACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAAGGCGCTCTGTTTGCTCGAGCTTGCTGGTCCTGCTGTTCTTGGTGAAAGTTCGGTGACAGTGTaGCAGATAAGCTTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAKALCLLELAGPAVLGESSVTV*QISLES Trigger: ACTTTCCAAGCTTATCTGCCACACTGTCACCGAACT...TTCACCAAGAACAGCAGGACCAGCAAGCTCGAGCAAACAGAGCGCCTTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
||
| 3UTR CAA 72 bp | ATGATGTGTTGTGACTTAAAATCTGAGAGCCTGGGCTaGGGGGATGGCCCAGATCCTCCCTTGTCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MMCCDLKSESLG*GDGPDPPLSGH Trigger: ATGACCTGACAAGGGAGGATCTGGGCCATCCCCCAAGCCCAGGCTCTCAGATTTTAAGTCACAACACATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CAA 72 bp | GAGGTGAGACATTCAGTGGTTTACCAGCATGCCTGGTaGTGGTCTTGCATCACTTACCCTGAAGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVRHSVVYQHAW*WSCITYPEASS Trigger: TGAGCTGGCTTCAGGGTAAGTGATGCAAGACCACAACCAGGCATGCTGGTAAACCACTGAATGTCTCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR GCA 90 bp | GCAGTTTCCCGTACTGGCTCTGGCCTCTGTATGCATAACTATTTCAAGTACATCTGGCCAGATGGGCTCTaGAGTGGATGCAGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSRTGSGLCMHNYFKYIWPDGL*SGCSCK Trigger: CTTACAGCTGCATCCACTGCAGAGCCCATCTGGCCA...GATGTACTTGAAATAGTTATGCATACAGAGGCCAGAGCCAGTACGGGAAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTATTACCAGCCTTCCAATCTTGGGCAAAGAAATGGCACCAAAATGTCGCCCCTGGCTTCCCTaGAAGGACTTGGAGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISCITSLPILGKEMAPKCRPWLP*KDLEIS Trigger: GCTTATCTCCAAGTCCTTTCAGGGAAGCCAGGGGCG...ACATTTTGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGTAATACAGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CAA 72 bp | GCTAACTCTTCCTTTACCTTGGAAAACTCTCATGTTTaGCAGTTTCCCGTACTGGCTCTGGCCTCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSFTLENSHV*QFPVLALASVC Trigger: GCATACAGAGGCCAGAGCCAGTACGGGAAACTGCAAAACATGAGAGTTTTCCAAGGTAAAGGAAGAGTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTATTACCAGCCTTCCAATCTTGGGCAAAGAAATGGCACCAAAATGTGAGATAAGCTCATCGTaGTTGGCCAGATGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISCITSLPILGKEMAPKCEISSS*LARWAL Trigger: CAGAGCCCATCTGGCCAATCACGATGAGCTTATCTC...ACATTTTGGTGCCATTTCTTTGCCCAAGATTGGAAGGCTGGTAATACAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| 3UTR CAA 72 bp | GAACCTCCCTATTTGCTTAAGATGTACACTGAATGCTaGCTTCCTAGCTTCTCTTCCATGTTACCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPPYLLKMYTEC*LPSFSSMLPVA Trigger: AGCCACTGGTAACATGGAAGAGAAGCTAGGAAGCAAGCATTCAGTGTACATCTTAAGCAAATAGGGAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR TCA 90 bp | TATTTGCTTAAGATGTACACTGAATGCTTGCTTCCTAGCTTCTCTTCCATGTTAACCAGCCGTTGTCTTTaGTCATGTGGGCAAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLLKMYTECLLPSFSSMLTSRCL*SCGQVQ Trigger: TTGAACTTGCCCACATGATCAAAGACAACGGCTGGT...TAACATGGAAGAGAAGCTAGGAAGCAAGCATTCAGTGTACATCTTAAGCAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS-3UTR CCA 90 bp | AAGTCATATAGAGTACTAGCAAAAACGTTCCAGTCAGAGCTCTCACAAAAGATAAAGCTTGGAAAGTTTTaGACTTGGTCATTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSYRVLAKTFQSELSQKIKLGKF*TWSFSP Trigger: TGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTT...TATCTTTTGTGAGAGCTCTGACTGGAACGTTTTTGCTAGTACTCTATATGACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
||
| CDS CCA 90 bp | CTTGGTCATTTTCACCATGTCTGCTGGGCTCTCGTCACTCGGTTCTaGGCCAGCTCTGGAGGAGCTAGGGCTCTGTCGGACTCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGHFHHVCWALVTRF*ASSGGARALSDSLT Trigger: TGTCAGAGAGTCCGACAGAGCCCTAGCTCCTCCAGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS TCA 90 bp | GCACAGAGCTCTGGGAGAGCCCAGGACTGCATTGACCTTTGTGCCTaGAGAGTGTCGTGGTGGACAAGGTGTGCTCTGCCGTATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: AQSSGRAQDCIDLCA*RVSWWTRCALPYFH Trigger: GTGGAAATACGGCAGAGCACACCTTGTCCACCACGACACTCTTCAGGCACAAAGGTCAATGCAGTCCTGGGCTCTCCCAGAGCTCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232574.2 |
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| CDS GCA 90 bp | CAGATAAGCTTGGAAAGTTTTGGACTTGGTCATTTTCACCATGTCTaGTGGGCTCTCGTCACTCGGTTCTGGGCCAGCTCTGGAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QISLESFGLGHFHHV*WALVTRFWASSGGA Trigger: AGCTCCTCCAGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS CCA 90 bp | ATAAGCTTGGAAAGTTTTGGACTTGGTCATTTTCACCATGTCTGCTaGGCTCTCGTCACTCGGTTCTGGGCCAGCTCTGGAGGAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ISLESFGLGHFHHVC*ALVTRFWASSGGAR Trigger: CCTAGCTCCTCCAGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS-3UTR CAA 90 bp | TTCTTGGTGAACTCCCTGTGGGTTCCACAGCACTGCAGTCAGCCTTGCTCAGCAGTGTGGCAGATAAGCTaGGAAAGTTTTGGACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: FLVNSLWVPQHCSQPCSAVWQIS*ESFGLG Trigger: ACCAAGTCCAAAACTTTCCAAGCTTATCTGCCACAC...TGCTGAGCAAGGCTGACTGCAGTGCTGTGGAACCCACAGGGAGTTCACCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231394.2 |
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| CDS-3UTR CAA 90 bp | AGCCTAGAGAGACACCTTCAAGTGTTGAGACTGGGCTGGCCTGTGAGGTTAAGTTACCAGCCGTTGTCTTaGATCATGTGGGCAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLERHLQVLRLGWPVRLSYQPLS*IMWASS Trigger: TGAACTTGCCCACATGATCAAAGACAACGGCTGGTA...ACTTAACCTCACAGGCCAGCCCAGTCTCAACACTTGAAGGTGTCTCTCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035682.16 ENSMUST00000231394.2 |
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| CDS CCA 90 bp | AGCTGTAAGTTCGGTGACAGTGTGGCAGATAAGCTTGGAAAGTTTTaGACTTGGTCATTTTCACCATGTCTGCTGGGCTCTCGTCACTCG | + |
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Preference number: 5 (lower is better) Translates to: SCKFGDSVADKLGKF*TWSFSPCLLGSRHS Trigger: CGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTTATCTGCCACACTGTCACCGAACTTACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGCCCAAAGGTCTAGATAGAAACTGCTTTTTGACTACCACACCCAGGCAGTACCAGCCGTTGTCTTaGATCATGTGGGCAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LEPKGLDRNCFLTTTPRQYQPLS*IMWASS Trigger: TGAACTTGCCCACATGATCAAAGACAACGGCTGGTA...CTGCCTGGGTGTGGTAGTCAAAAAGCAGTTTCTATCTAGACCTTTGGGCTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| CDS-3UTR CAA 90 bp | ACAATGAAACTTATCTGGGAATGGTTCTGGCCTCCATCCTCTCTGCAAATTGGCGTGTGGCAGATAAGCTaGGAAAGTTTTGGACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: TMKLIWEWFWPPSSLQIGVWQIS*ESFGLG Trigger: ACCAAGTCCAAAACTTTCCAAGCTTATCTGCCACAC...GCCAATTTGCAGAGAGGATGGAGGCCAGAACCATTCCCAGATAAGTTTCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035682.16 |
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| CDS CCA 72 bp | TTTCACCATGTCTGCTGGGCTCTCGTCACTCGGTTCTaGGCCAGCTCTGGAGGAGCTAGGGCTCTGTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: FHHVCWALVTRF*ASSGGARALSD Trigger: GTCCGACAGAGCCCTAGCTCCTCCAGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS TCA 72 bp | TCTGGGAGAGCCCAGGACTGCATTGACCTTTGTGCCTaGAGAGTGTCGTGGTGGACAAGGTGTGCTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SGRAQDCIDLCA*RVSWWTRCALP Trigger: CGGCAGAGCACACCTTGTCCACCACGACACTCTTCAGGCACAAAGGTCAATGCAGTCCTGGGCTCTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232574.2 |
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| CDS GCA 72 bp | GGTGTGCTCTGCCGTATTTCCACCCGAGTGTGGTCTTaGAGTTCTCACAGTAGATGTCGGCCACTGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: GVLCRISTRVWS*SSHSRCRPLHA Trigger: TGCATGCAGTGGCCGACATCTACTGTGAGAACTGCAAGACCACACTCGGGTGGAAATACGGCAGAGCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232574.2 |
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| CDS GCA 72 bp | CCTTTGTGCCTGAAGAGTGTCGTGGTGGACAAGGTGTaGTCTGCCGTATTTCCACCCGAGTGTGGTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PLCLKSVVVDKV*SAVFPPECGLA Trigger: TGCAAGACCACACTCGGGTGGAAATACGGCAGAGCACACCTTGTCCACCACGACACTCTTCAGGCACAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232574.2 |
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| CDS CCA 72 bp | GAAAGTTTTGGACTTGGTCATTTTCACCATGTCTGCTaGGCTCTCGTCACTCGGTTCTGGGCCAGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ESFGLGHFHHVC*ALVTRFWASSG Trigger: TCCAGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS GCA 72 bp | CAAAGGCATGTTCGTATTTCCACCCGAGTGTGGTCTTaGAGTTCTCACAGTAGATGTCGGCCACTGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: QRHVRISTRVWS*SSHSRCRPLHA Trigger: TGCATGCAGTGGCCGACATCTACTGTGAGAACTGCAAGACCACACTCGGGTGGAAATACGAACATGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035682.16 ENSMUST00000231394.2 ENSMUST00000239090.2 |
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| CDS GCA 72 bp | TTGGAAAGTTTTGGACTTGGTCATTTTCACCATGTCTaGTGGGCTCTCGTCACTCGGTTCTGGGCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LESFGLGHFHHV*WALVTRFWASS Trigger: AGAGCTGGCCCAGAACCGAGTGACGAGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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| CDS CCA 72 bp | TTCGGTGACAGTGTGGCAGATAAGCTTGGAAAGTTTTaGACTTGGTCATTTTCACCATGTCTGCTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FGDSVADKLGKF*TWSFSPCLLGS Trigger: AGAGCCCAGCAGACATGGTGAAAATGACCAAGTCCAAAACTTTCCAAGCTTATCTGCCACACTGTCACCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239090.2 |
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