Pregenerated sensors for YOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046404Ensembl transcript IDs: ENSMUST00000049813.6
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTGCACAAAGGGCATTCAAGAAAAGTCATCTGGCCAGGTACGGTaGCCCCTACTTGTAATCTCAACACTCAGAAGGCAGAGGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: MCTKGIQEKSSGQVR*PLLVISTLRRQRQK Trigger: CTTCTGCCTCTGCCTTCTGAGTGTTGAGATTACAAGTAGGGGCCACCGTACCTGGCCAGATGACTTTTCTTGAATGCCCTTTGTGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 90 bp | TGCCTGACTGGCTATGTGCACAAAGGGCATTCAAGAAAAGTCATCTaGCCAGGTACGGTGGCCCCTACTTGTAATCTCAACACTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLTGYVHKGHSRKVI*PGTVAPTCNLNTQK Trigger: CTTCTGAGTGTTGAGATTACAAGTAGGGGCCACCGTACCTGGCCAGATGACTTTTCTTGAATGCCCTTTGTGCACATAGCCAGTCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 90 bp | GTCAGACATCTCCCAGAGAGCAGCAGTGCATTGACCTTGGAAACTTaGTGGCAAACGACAAAGAACATTCTGGAAGCAGCACTAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: VRHLPESSSALTLET*WQTTKNILEAALRT Trigger: TGTTCTTAGTGCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 90 bp | AGACATCTCCCAGAGAGCAGCAGTGCATTGACCTTGGAAACTTGCTaGCAAACGACAAAGAACATTCTGGAAGCAGCACTAAGAACACAT | + |
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Preference number: 1 (lower is better) Translates to: RHLPESSSALTLETC*QTTKNILEAALRTH Trigger: ATGTGTTCTTAGTGCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR TCA 90 bp | TTGTATAAAATGAAGTCAGACATCTCCCAGAGAGCAGCAGTGCATTaGCCTTGGAAACTTGCTGGCAAACGACAAAGAACATTCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LYKMKSDISQRAAVH*PWKLAGKRQRTFWK Trigger: CTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCTGACTTCATTTTATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 90 bp | CTTTACCTGGAAGATTCTATAGTGAAGCTAAGTTTTGAGAGCAAGTaGCTTGAGGATCAATCCATCAAGCAAATGGCTACATACCTAACA | + |
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Preference number: 1 (lower is better) Translates to: LYLEDSIVKLSFESK*LEDQSIKQMATYLT Trigger: TGTTAGGTATGTAGCCATTTGCTTGATGGATTGATCCTCAAGGCACTTGCTCTCAAAACTTAGCTTCACTATAGAATCTTCCAGGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 90 bp | GAAATCAACCATGAATCGCTAGCAAAAGATGTGGTAGCATCTAGATaGCTTCATGTGGTGTCATATCACAAAATTCCCAGGGACATTAAT | + |
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Preference number: 1 (lower is better) Translates to: EINHESLAKDVVASR*LHVVSYHKIPRDIN Trigger: ATTAATGTCCCTGGGAATTTTGTGATATGACACCACATGAAGGCATCTAGATGCTACCACATCTTTTGCTAGCGATTCATGGTTGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 90 bp | TACCCATCCTTTTCACTTGAAAATGCCATGGGAAGGCTAACACCCTaGCTTAAATCAAATGAATGTAGACACAAACACTTCATAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: YPSFSLENAMGRLTP*LKSNECRHKHFIIQ Trigger: CTGAATTATGAAGTGTTTGTGTCTACATTCATTTGATTTAAGGCAGGGTGTTAGCCTTCCCATGGCATTTTCAAGTGAAAAGGATGGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 90 bp | GCATTCTTAAAGAAAACAAATAATTTGGTACAAATGCATTTCCTGTaGCACCTTGAATGGCACAAATGTGAACAGGCAACCCTTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: AFLKKTNNLVQMHFL*HLEWHKCEQATLVL Trigger: AAGGACAAGGGTTGCCTGTTCACATTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTTCTTTAAGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 90 bp | GAAACACACAGGGAGACTTTGTCTCAACACAAAAGAGAATCTCATTaGATGATTGAAGCATACTTTGTGAATTGTTCAATTGTCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: ETHRETLSQHKRESH*MIEAYFVNCSIVLK Trigger: TTTAAGGACAATTGAACAATTCACAAAGTATGCTTCAATCATCCAATGAGATTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAAGTTCGAGGCCAGCCTaGTCTACAGAGTTCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTSSRPA*STEFQD Trigger: GTCCTGGAACTCTGTAGACCAGGCTGGCCTCGAACT...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR TCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACCCAGAGGACAGGTCTaGAGAGACTTTTGTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTPRGQV*RDFCDS Trigger: ACTGTCACAAAAGTCTCTTCAGACCTGTCCTCTGGG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAAAACCCAGAGCCTTCTaGATCTGTGAGGTAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTKPRAF*ICEVVG Trigger: GCCTACTACCTCACAGATCCAGAAGGCTCTGGGTTT...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CAA 90 bp | AGTCAGACATCTCCCAGAGAGCAGCAGTGCATTGACCTTGGAAACTaGCTGGCAAACGACAAAGAACATTCTGGAAGCAGCACTAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQTSPREQQCIDLGN*LANDKEHSGSSTKN Trigger: GTTCTTAGTGCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACTACTGGAGACATTGTaGTATATGTCCAGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTLLETL*YMSSGP Trigger: AGGGCCACTGGACATATACCACAATGTCTCCAGTAG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACCAGGGACATTAATTTaGACTACTGCTGTGACTAGG | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTPGTLI*TTAVTR Trigger: CCTAGTCACAGCAGTAGTCCAAATTAATGTCCCTGG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR TCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACTGAAGAGACTTTTGTaGCAGTCATTACATGTCATG | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTLKRLL*QSLHVM Trigger: CATGACATGTAATGACTGTCACAAAAGTCTCTTCAG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAAGCCTTCTGGATCTGTaGGGTAGTAGGCTCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKSLLDL*GSRLPL Trigger: GAGTGGGAGCCTACTACCTCACAGATCCAGAAGGCT...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACATGCTTTAAAGCACATTaGTGTAAATGGTTCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTCFKAH*CKWFSE Trigger: CTCAGAGAACCATTTACACCAATGTGCTTTAAAGCA...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAAAAAACTGGACAGAATaGGTTTCATTAGGACATAGG | + |
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Preference number: 2 (lower is better) Translates to: TFPTTKAALYSLSWMCCTKNWTE*VSLGHR Trigger: CCTATGTCCTAATGAAACCCATTCTGTCCAGTTTTT...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CAA 90 bp | ATGGTATCAGTTCCTAACAACAAGGTTAGGTTGGCCAGTAACCCCTaGCCTATGACTTCATTCATGGAGAGCTTTAAGAAATCAACCATG | + |
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Preference number: 2 (lower is better) Translates to: MVSVPNNKVRLASNP*PMTSFMESFKKSTM Trigger: CATGGTTGATTTCTTAAAGCTCTCCATGAATGAAGTCATAGGCAAGGGGTTACTGGCCAACCTAACCTTGTTGTTAGGAACTGATACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CAA 90 bp | ACTAACTCATTCAAAGTTATTAAAAGGAATCAACTACTGGAGACATaGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCCACATTAC | + |
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Preference number: 2 (lower is better) Translates to: TNSFKVIKRNQLLET*WYMSSGPPQGFPHY Trigger: GTAATGTGGAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGATTCCTTTTAATAACTTTGAATGAGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR TCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATTTTGAGCTGAAGAGCTaGGGAAATCAAATCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GMFHNKNTTLKPVLISANFELKS*GNQIPS Trigger: TGAAGGGATTTGATTTCCTCAGCTCTTCAGCTCAAA...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAAGGATCACTTTGAGTTaGAGGAGCCTGGTCTATATA | + |
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Preference number: 2 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKRITLS*RSLVYI Trigger: TATATAGACCAGGCTCCTCCAACTCAAAGTGATCCT...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR TCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATACCAAAGCATTCCATTaGCACTTTAGAGGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: GMFHNKNTTLKPVLISANTKAFH*HFRGRL Trigger: AAGTCTTCCTCTAAAGTGTCAATGGAATGCTTTGGT...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATAAAGGAATCAACTACTaGAGACATTGTGGTATATGT | + |
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Preference number: 2 (lower is better) Translates to: GMFHNKNTTLKPVLISANKGINY*RHCGIC Trigger: ACATATACCACAATGTCTCCAGTAGTTGATTCCTTT...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR TCA 72 bp | ACAATAGGCACTAAGAAACCATCCGGGGTGGAATGCTaGTCGCTAAGCACTTACCCTTGCAGCAAAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: TIGTKKPSGVEC*SLSTYPCSKKP Trigger: GGGCTTTTTGCTGCAAGGGTAAGTGCTTAGCGATCAGCATTCCACCCCGGATGGTTTCTTAGTGCCTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | CTCCCAGAGAGCAGCAGTGCATTGACCTTGGAAACTTaGTGGCAAACGACAAAGAACATTCTGGAAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LPESSSALTLET*WQTTKNILEAA Trigger: TGCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | AAGGGCATTCAAGAAAAGTCATCTGGCCAGGTACGGTaGCCCCTACTTGTAATCTCAACACTCAGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KGIQEKSSGQVR*PLLVISTLRRQ Trigger: CTGCCTTCTGAGTGTTGAGATTACAAGTAGGGGCCACCGTACCTGGCCAGATGACTTTTCTTGAATGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | GGCTATGTGCACAAAGGGCATTCAAGAAAAGTCATCTaGCCAGGTACGGTGGCCCCTACTTGTAATCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: GYVHKGHSRKVI*PGTVAPTCNLN Trigger: GTTGAGATTACAAGTAGGGGCCACCGTACCTGGCCAGATGACTTTTCTTGAATGCCCTTTGTGCACATAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | TGCTGGCTAGCAGCTGGCTTGGGGTTGTATCATTACTaGCCTCGAGGTCTTCTAGAGAGCTATGTAAACTTT | + |
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Preference number: 3 (lower is better) Translates to: CWLAAGLGLYHY*PRGLLESYVNF Trigger: AAAGTTTACATAGCTCTCTAGAAGACCTCGAGGGCAGTAATGATACAACCCCAAGCCAGCTGCTAGCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | CCAGAGAGCAGCAGTGCATTGACCTTGGAAACTTGCTaGCAAACGACAAAGAACATTCTGGAAGCAGCACTA | + |
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Preference number: 3 (lower is better) Translates to: PESSSALTLETC*QTTKNILEAAL Trigger: TAGTGCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCGACAAGAAACACACAGGGAGACTTTGTCTCAACACAAAAGAGAATCTCAACTACTGGAGACATaGTGGTATATGTCCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PGRQETHRETLSQHKRESQLLET*WYMSSG Trigger: GCCACTGGACATATACCACAATGTCTCCAGTAGTTG...AGATTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGTTTCTTGTCGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | TCTCTAATTTTTAAAGTGCTGCAAATGAGCCAGACGTaGTGGCACACGCCTTTAATCCTAGCACTCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SLIFKVLQMSQT*WHTPLILALRR Trigger: CCTCCTGAGTGCTAGGATTAAAGGCGTGTGCCACCACGTCTGGCTCATTTGCAGCACTTTAAAAATTAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR TCA 72 bp | AATCTAACCCAGAGGACAGGTCTGAAGAGACTTTTGTaGCAGTCATTACATGTCATGACCTCCAAGTGTCCG | + |
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Preference number: 3 (lower is better) Translates to: NLTQRTGLKRLL*QSLHVMTSKCP Trigger: CGGACACTTGGAGGTCATGACATGTAATGACTGTCACAAAAGTCTCTTCAGACCTGTCCTCTGGGTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR TCA 72 bp | ATCATAAGATACATAAATACTGATGGCAATAGCGTATaGGAGCTGCTGGCTAGCAGCTGGCTTGGGGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: IIRYINTDGNSV*ELLASSWLGVV Trigger: TACAACCCCAAGCCAGCTGCTAGCCAGCAGCTCTCATACGCTATTGCCATCAGTATTTATGTATCTTATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CAA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAGAACAAAGTACTAACTaGCAGAACTGTGAAATATCC | + |
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Preference number: 3 (lower is better) Translates to: TFPTTKAALYSLSWMCCTEQSTN*QNCEIS Trigger: GGATATTTCACAGTTCTGCAAGTTAGTACTTTGTTC...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR TCA 72 bp | ACAACAAGGTTAGGTTGGCCAGTAACCCCTTGCCTATaGCTTCATTCATGGAGAGCTTTAAGAAATCAACCA | + |
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Preference number: 3 (lower is better) Translates to: TTRLGWPVTPCL*LHSWRALRNQP Trigger: TGGTTGATTTCTTAAAGCTCTCCATGAATGAAGTCATAGGCAAGGGGTTACTGGCCAACCTAACCTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | CATGAATCGCTAGCAAAAGATGTGGTAGCATCTAGATaGCTTCATGTGGTGTCATATCACAAAATTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HESLAKDVVASR*LHVVSYHKIPR Trigger: CCTGGGAATTTTGTGATATGACACCACATGAAGGCATCTAGATGCTACCACATCTTTTGCTAGCGATTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | GTAACTGATGGGTTACACTCAACTAAACATTCTATATaGATTCTGGAGCCAAGCCACATCAGCTCGGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: VTDGLHSTKHSI*ILEPSHISSVE Trigger: TTCTACCGAGCTGATGTGGCTTGGCTCCAGAATGCATATAGAATGTTTAGTTGAGTGTAACCCATCAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | GAATCAACTACTGGAGACATTGTGGTATATGTCCAGTaGCCCTCCACAAGGCTTTCCACATTACCTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: ESTTGDIVVYVQ*PSTRLSTLPKI Trigger: TATTTTAGGTAATGTGGAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAATTGGCCAGTAACCCCTaGCCTATGACTTCATTCATG | + |
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Preference number: 3 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKLASNP*PMTSFM Trigger: CATGAATGAAGTCATAGGCAAGGGGTTACTGGCCAA...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | GAAGATTCTATAGTGAAGCTAAGTTTTGAGAGCAAGTaGCTTGAGGATCAATCCATCAAGCAAATGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: EDSIVKLSFESK*LEDQSIKQMAT Trigger: TGTAGCCATTTGCTTGATGGATTGATCCTCAAGGCACTTGCTCTCAAAACTTAGCTTCACTATAGAATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | CTAACTCATTCAAAGTTATTAAAAGGAATCAACTACTaGAGACATTGTGGTATATGTCCAGTGGCCCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LTHSKLLKGINY*RHCGICPVALH Trigger: GTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGATTCCTTTTAATAACTTTGAATGAGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAACATGTGTTTCAAAGCTaGTGTTCACGGCCGTATACA | + |
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Preference number: 3 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKHVFQS*CSRPYT Trigger: TGTATACGGCCGTGAACACAAGCTTTGAAACACATG...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | TTTTCACTTGAAAATGCCATGGGAAGGCTAACACCCTaGCTTAAATCAAATGAATGTAGACACAAACACTTC | + |
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Preference number: 3 (lower is better) Translates to: FSLENAMGRLTP*LKSNECRHKHF Trigger: GAAGTGTTTGTGTCTACATTCATTTGATTTAAGGCAGGGTGTTAGCCTTCCCATGGCATTTTCAAGTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR GCA 72 bp | CAGGCTTTATTGATGATTTTCTTATTTAAGGAGCTCTaGTTCCACTGTGCTAGTACAGCCACAATAAGACTA | + |
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Preference number: 3 (lower is better) Translates to: QALLMIFLFKEL*FHCASTATIRL Trigger: TAGTCTTATTGTGGCTGTACTAGCACAGTGGAAGCAGAGCTCCTTAAATAAGAAAATCATCAATAAAGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR CCA 72 bp | AAGAAAACAAATAATTTGGTACAAATGCATTTCCTGTaGCACCTTGAATGGCACAAATGTGAACAGGCAACC | + |
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Preference number: 3 (lower is better) Translates to: KKTNNLVQMHFL*HLEWHKCEQAT Trigger: GGTTGCCTGTTCACATTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| 3UTR-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAACACACAGGGAGACTTaGTCTCAACACAAAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKTHRET*SQHKRE Trigger: TTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGT...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CCA 72 bp | AGGGAGACTTTGTCTCAACACAAAAGAGAATCTCATTaGATGATTGAAGCATACTTTGTGAATTGTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: RETLSQHKRESH*MIEAYFVNCSI Trigger: AATTGAACAATTCACAAAGTATGCTTCAATCATCCAATGAGATTCTCTTTTGTGTTGAGACAAAGTCTCCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ATCAACTACTGGAGACATTGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCGGTGGGTGCCACCCTTaGCCTTGCAGCGGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: INYWRHCGICPVALHKAFGGCHP*PCSGPA Trigger: GGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACC...GAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | GCGTATGAGAGCTGCTGGCTAGCAGCTGGCTTGGGGTaGTATCATTACTGCCCTCGAGGTCTTCTAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYESCWLAAGLG*YHYCPRGLLES Trigger: GCTCTCTAGAAGACCTCGAGGGCAGTAATGATACAACCCCAAGCCAGCTGCTAGCCAGCAGCTCTCATACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCGACAAGAAACACACAGGGAGACTTTGTCTCAACACAAAAGAGAATCTCCAACGAGGATTCGCTaGCTGCCGGGAGCGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGRQETHRETLSQHKRESPTRIR*LPGAMP Trigger: CGGCATCGCTCCCGGCAGTCAGCGAATCCTCGTTGG...AGATTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGTTTCTTGTCGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACGGCTGGAAAGACCCTaGAAAAGGTGGGTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTTKAALYSLSWMCCTRLERP*KRWVPP Trigger: GGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | GCAATAGCGTATGAGAGCTGCTGGCTAGCAGCTGGCTaGGGGTTGTATCATTACTGCCCTCGAGGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AIAYESCWLAAG*GLYHYCPRGLL Trigger: TAGAAGACCTCGAGGGCAGTAATGATACAACCCCAAGCCAGCTGCTAGCCAGCAGCTCTCATACGCTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ATCAACTACTGGAGACATTGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCAGACCCTGCAAAAGGTaGGTGCCACCCTTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: INYWRHCGICPVALHKAFRPCKR*VPPLAL Trigger: CAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCT...GAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAGAGGCAAGAGTTGTCTaGTGGGACTGCGGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFPTTKAALYSLSWMCCTEARVV*WDCGSG Trigger: ACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTC...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ATCAACTACTGGAGACATTGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCTATGGCCTGTCTCCCTaGCATGGTCCCTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: INYWRHCGICPVALHKAFYGLSP*HGPLLL Trigger: CAGAAGCAAGGGACCATGCCAGGGAGACAGGCCATA...GAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACCCTGCAAAAGGTGGGTaGCACCCTTGGCCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKTRGQQSFKASGSCFRHPAKGG*HPWPCS Trigger: GCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGG...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACATCTCCAAAGTTGGTATaGCCTGTCTCCCTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFPTTKAALYSLSWMCCTSPKLV*PVSLAW Trigger: CCATGCCAGGGAGACAGGCCATACCAACTTTGGAGA...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | TCTCCCAGAGAGCAGCAGTGCATTGACCTTGGAAACTaGCTGGCAAACGACAAAGAACATTCTGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPREQQCIDLGN*LANDKEHSGSS Trigger: GCTGCTTCCAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | GTCAGACATCTCCCAGAGAGCAGCAGTGCATTGACCTaGGAAACTTGCTGGCAAACGACAAAGAACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRHLPESSSALT*ETCWQTTKNIL Trigger: CAGAATGTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACCAGAGGAGGGGTATCTaGATCAGGGAAGTTACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKTRGQQSFKASGSCFRHQRRGI*IREVTL Trigger: CAGCGTAACTTCCCTGATCCAGATACCCCTCCTCTG...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | AATGAAGTCAGACATCTCCCAGAGAGCAGCAGTGCATaGACCTTGGAAACTTGCTGGCAAACGACAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NEVRHLPESSSA*TLETCWQTTKN Trigger: GTTCTTTGTCGTTTGCCAGCAAGTTTCCAAGGTCAATGCACTGCTGCTCTCTGGGAGATGTCTGACTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAACTTGCTACAATTTGTaGTATGAGGCGTCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTTKAALYSLSWMCCTTCYNL*YEASHL Trigger: GAGATGAGACGCCTCATAGCACAAATTGTAGCAAGT...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | ATCAACTACTGGAGACATTGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCCAAGACTGGATCACTTaGTACAATTTGTGCTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: INYWRHCGICPVALHKAFQDWIT*YNLCYE Trigger: CTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTG...GAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR GCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATGTTGTCTGCTGGGACTaGGGTTCTGGTAAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANVVCWD*GSGKHR Trigger: CCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAAC...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATGTAAGCGGGTCCGGCTaGAAAGACCCTGCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANVSGSG*KDPAKG Trigger: ACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTTAC...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | ATCAACTACTGGAGACATTGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTTCCTCACTATACAAGACTaGATCACTTGCTACAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: INYWRHCGICPVALHKAFLTIQD*ITCYNL Trigger: CAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAG...GAAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | CTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTaGGATGTGCTGCACATTACAATAGGCACTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHNQGSLVFIE*DVLHITIGTKK Trigger: TTTCTTAGTGCCTATTGTAATGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | ACAAAAACCCAAACCTTTCCCACAACCAAGGCAGCCTaGTATTCATTGAGTTGGATGTGCTGCACATTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TKTQTFPTTKAA*YSLSWMCCTLQ Trigger: TTGTAATGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGTTTGGGTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | CAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTaGAATGGCACAAATGTGAACAGGCAACCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIIWYKCISCGT*NGTNVNRQPLS Trigger: GGACAAGGGTTGCCTGTTCACATTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATGCAAGAGTTGTCTGCTaGGACTGCGGTTCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANARVVC*DCGSGK Trigger: CTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGC...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATCTCAGGGGCACAAGCTaGATTCAAGACTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANLRGTS*IQDSSF Trigger: GAAGGAGGAGTCTTGAATCCAGCTTGTGCCCCTGAG...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAACACCTCTCCAAAGTTaGTATGGCCTGTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKTPLQS*YGLSPW Trigger: CCAGGGAGACAGGCCATACCAACTTTGGAGAGGTGT...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | CAAATTCCAGGCCGACAAGAAACACACAGGGAGACTTaGTCTCAACACAAAAGAGAATCTCATTGGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGRQETHRET*SQHKRESHWMI Trigger: AATCATCCAATGAGATTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGTTTCTTGTCGGCCTGGAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR TCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATCTACAATTTGTGCTATaGGGCGTCTCATCTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANLQFVL*GVSSQG Trigger: CCCCTGAGATGAGACGCCTCATAGCACAAATTGTAG...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR TCA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACCAAAACGATCAATTCTaGCTGTCTGTGTATCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: IKTRGQQSFKASGSCFRHQNDQF*LSVYLL Trigger: TAGTAGATACACAGACAGTCAGAATTGATCGTTTTG...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR TCA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACAACAATATCATCATTTaGGGAGAAAATGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKTRGQQSFKASGSCFRHNNIII*GENGQR Trigger: CCTCTGACCATTTTCTCCTCAAATGATGATATTGTT...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| 3UTR CAA 72 bp | TTCAAAGTTATTAAAAGGAATCAACTACTGGAGACATaGTGGTATATGTCCAGTGGCCCTCCACAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKVIKRNQLLET*WYMSSGPPQGF Trigger: AAAGCCTTGTGGAGGGCCACTGGACATATACCACAATGTCTCCAGTAGTTGATTCCTTTTAATAACTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CCA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATCATTTGAGGAGAAAATaGTCAGAGGAGGGGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GMFHNKNTTLKPVLISANHLRRK*SEEGYL Trigger: CAGATACCCCTCCTCTGACCATTTTCTCCTCAAATG...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS GCA 90 bp | GGCCTTGCAGCGGACCCGCCACATAGTGTCGGCCGGCCGGCCTCCTaGGGGGCCAGCCTTGGTCCCAGCCTCAGACTGGGGGACAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLAADPPHSVGRPAS*GASLGPSLRLGDSA Trigger: GGCGCTGTCCCCCAGTCTGAGGCTGGGACCAAGGCTGGCCCCGCAGGAGGCCGGCCGGCCGACACTATGTGGCGGGTCCGCTGCAAGGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS GCA 90 bp | ATTTGGCCCTGCAGCTCCCGTAAGCGGGTCCGGCTGGAAAGACCCTaGAAAAGGTGGGTGCCACCCTTGGCCTTGCAGCGGACCCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IWPCSSRKRVRLERP*KRWVPPLALQRTRH Trigger: GTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTTACGGGAGCTGCAGGGCCAAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS CCA 90 bp | TGCAGCTCCCGTAAGCGGGTCCGGCTGGAAAGACCCTGCAAAAGGTaGGTGCCACCCTTGGCCTTGCAGCGGACCCGCCACATAGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSSRKRVRLERPCKR*VPPLALQRTRHIVS Trigger: CGACACTATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTTACGGGAGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCGACAAGAAACACACAGGGAGACTTTGTCTCAACACAAAAGAGAATCTAGGTGGGTGCCACCCTaGGCCTTGCAGCGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRQETHRETLSQHKRESRWVPP*ALQRTR Trigger: GCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCT...AGATTCTCTTTTGTGTTGAGACAAAGTCTCCCTGTGTGTTTCTTGTCGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACAGTGCCACCCTTGGCCTaGCAGCGGACCCGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: TFPTTKAALYSLSWMCCTVPPLA*QRTRHI Trigger: TATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCAC...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS TCA 90 bp | AGCTTTTGGTCTGGTTTGGTCTTCTTCAACAATCAGCATGTCACCTaGCTGGATGGGCAGGTCCCCAAGAGTGATGTCCCGGTCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFWSGLVFFNNQHVT*LDGQVPKSDVPVAE Trigger: CTCAGCGACCGGGACATCACTCTTGGGGACCTGCCCATCCAGTCAGGTGACATGCTGATTGTTGAAGAAGACCAAACCAGACCAAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS TCA 90 bp | TCCCTGGCATGGTCCCTTGCTTCTGCTTGTCCGGTTAGGCCCTTCTaGCAGATCATGCATCTCAGGGTGAAGCGGTTTACATCAGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLAWSLASACPVRPF*QIMHLRVKRFTSVN Trigger: GTTCACTGATGTAAACCGCTTCACCCTGAGATGCATGATCTGTCAGAAGGGCCTAACCGGACAAGCAGAAGCAAGGGACCATGCCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS GCA 90 bp | TCCTTCCACGACATAGTACACACTGGTAAAGAGGCAAGAGTTGTCTaGTGGGACTGCGGTTCTGGTAAGCACAGGCAGAGCTTCCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFHDIVHTGKEARVV*WDCGSGKHRQSFPD Trigger: GTCAGGGAAGCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTGTACTATGTCGTGGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS CCA 90 bp | TTTGGTCTGGTTTGGTCTTCTTCAACAATCAGCATGTCACCTGACTaGATGGGCAGGTCCCCAAGAGTGATGTCCCGGTCGCTGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: FGLVWSSSTISMSPD*MGRSPRVMSRSLRS Trigger: GGATCTCAGCGACCGGGACATCACTCTTGGGGACCTGCCCATCCAGTCAGGTGACATGCTGATTGTTGAAGAAGACCAAACCAGACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCCCACAACCAAGGCAGCCTTGTATTCATTGAGTTGGATGTGCTGCACACCCTGGCATGGTCCCTaGCTTCTGCTTGTCCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TFPTTKAALYSLSWMCCTPWHGP*LLLVRL Trigger: TAACCGGACAAGCAGAAGCAAGGGACCATGCCAGGG...TGTGCAGCACATCCAACTCAATGAATACAAGGCTGCCTTGGTTGTGGGAAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS GCA 90 bp | GACATAGTACACACTGGTAAAGAGGCAAGAGTTGTCTGCTGGGACTaGGGTTCTGGTAAGCACAGGCAGAGCTTCCCTGACATAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DIVHTGKEARVVCWD*GSGKHRQSFPDITR Trigger: CCTAGTTATGTCAGGGAAGCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTGTACTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS CCA 90 bp | TTCCACGACATAGTACACACTGGTAAAGAGGCAAGAGTTGTCTGCTaGGACTGCGGTTCTGGTAAGCACAGGCAGAGCTTCCCTGACATA | + |
|
Preference number: 5 (lower is better) Translates to: FHDIVHTGKEARVVC*DCGSGKHRQSFPDI Trigger: TATGTCAGGGAAGCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTGTACTATGTCGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS-3UTR CAA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATCCTGCGGGGCCAGCCTaGGTCCCAGCCTCAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GMFHNKNTTLKPVLISANPAGPA*VPASDW Trigger: CCAGTCTGAGGCTGGGACCAAGGCTGGCCCCGCAGG...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
||
| CDS TCA 90 bp | TCGCCTCACTATACAAGACTGGATCACTTGCTACAATTTGTGCTATaGGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAAGACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPHYTRLDHLLQFVL*GVSSQGHKLDSRLL Trigger: GAGGAGTCTTGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 90 bp | GTTTGTCTTTCCCAGTATCGCCTCACTATACAAGACTGGATCACTTaGTACAATTTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: VCLSQYRLTIQDWIT*YNLCYEASHLRGTS Trigger: GCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGATACTGGGAAAGACAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 90 bp | TGCTACAATTTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTaGATTCAAGACTCCTCCTTCCACGACATAGTACACACTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: CYNLCYEASHLRGTS*IQDSSFHDIVHTGK Trigger: TTTACCAGTGTGTACTATGTCGTGGAAGGAGGAGTCTTGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 90 bp | GTAGTCTTCGTTTGTCTTTCCCAGTATCGCCTCACTATACAAGACTaGATCACTTGCTACAATTTGTGCTATGAGGCGTCTCATCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VVFVCLSQYRLTIQD*ITCYNLCYEASHLR Trigger: CCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGATACTGGGAAAGACAAACGAAGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 90 bp | ATTCCAGTGCTTGTACAAGAACAATATCATCATTTGAGGAGAAAATaGTCAGAGGAGGGGTATCTGGATCAGGGAAGTTACGCTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: IPVLVQEQYHHLRRK*SEEGYLDQGSYAEA Trigger: CGCTTCAGCGTAACTTCCCTGATCCAGATACCCCTCCTCTGACCATTTTCTCCTCAAATGATGATATTGTTCTTGTACAAGCACTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACACGCAGGTGAAGCTTTaGGTCTGGTTTGGTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: IKTRGQQSFKASGSCFRHTQVKL*VWFGLL Trigger: AAGAAGACCAAACCAGACCAAAAGCTTCACCTGCGT...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAACAAGAGGCCAACAGTCTTTTAAAGCTTCAGGAAGCTGCTTCAGGCACCACAGTAGTCTTCGTTaGTCTTTCCCAGTATCGCCT | + |
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Preference number: 5 (lower is better) Translates to: IKTRGQQSFKASGSCFRHHSSLR*SFPVSP Trigger: AGGCGATACTGGGAAAGACAAACGAAGACTACTGTG...GTGCCTGAAGCAGCTTCCTGAAGCTTTAAAAGACTGTTGGCCTCTTGTTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAACACACCTCTCCAAAGTaGGTATGGCCTGTCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKHTSPK*VWPVSL Trigger: CAGGGAGACAGGCCATACCAACTTTGGAGAGGTGTG...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAGTAAAGAGGCAAGAGTaGTCTGCTGGGACTGCGGTT | + |
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Preference number: 5 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKVKRQE*SAGTAV Trigger: AACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTAC...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATAGCTTTTGGTCTGGTTaGGTCTTCTTCAACAATCAG | + |
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Preference number: 5 (lower is better) Translates to: GMFHNKNTTLKPVLISANSFWSG*VFFNNQ Trigger: CTGATTGTTGAAGAAGACCAAACCAGACCAAAAGCT...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAATCACTTGCTACAATTaGTGCTATGAGGCGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKITCYN*CYEASH Trigger: ATGAGACGCCTCATAGCACAAATTGTAGCAAGTGAT...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | GGAATGTTTCACAACAAAAACACTACTCTCAAACCAGTTCTCATATCAGCAAATATAAGCAGAACTCTTTaGGTATATCCTGCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GMFHNKNTTLKPVLISANISRTL*VYPASS Trigger: GGAAGATGCAGGATATACCAAAAGAGTTCTGCTTAT...ATTTGCTGATATGAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS-3UTR CAA 90 bp | AAAACAAATAATTTGGTACAAATGCATTTCCTGTGGCACCTTGAATGGCACAAAGAACAATATCATCATTaGAGGAGAAAATGGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: KTNNLVQMHFLWHLEWHKEQYHH*RRKWSE Trigger: CTCTGACCATTTTCTCCTCAAATGATGATATTGTTC...TTTGTGCCATTCAAGGTGCCACAGGAAATGCATTTGTACCAAATTATTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 90 bp | GTCCGGCTGGAAAGACCCTGCAAAAGGTGGGTGCCACCCTTGGCCTaGCAGCGGACCCGCCACATAGTGTCGGCCGGCCGGCCTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VRLERPCKRWVPPLA*QRTRHIVSAGRPPA Trigger: CGCAGGAGGCCGGCCGGCCGACACTATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 90 bp | AAGCGGGTCCGGCTGGAAAGACCCTGCAAAAGGTGGGTGCCACCCTaGGCCTTGCAGCGGACCCGCCACATAGTGTCGGCCGGCCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KRVRLERPCKRWVPP*ALQRTRHIVSAGRP Trigger: AGGCCGGCCGGCCGACACTATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 72 bp | CCGGGAGCGATGCCGGTGATAGCGGCGATTTGGCCCTaGAGCTCCCGTAAGCGGGTCCGGCTGGAAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: PGAMPVIAAIWP*SSRKRVRLERP Trigger: GGGTCTTTCCAGCCGGACCCGCTTACGGGAGCTGCAGGGCCAAATCGCCGCTATCACCGGCATCGCTCCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 72 bp | GAAAGACCCTGCAAAAGGTGGGTGCCACCCTTGGCCTaGCAGCGGACCCGCCACATAGTGTCGGCCGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: ERPCKRWVPPLA*QRTRHIVSAGR Trigger: CCGGCCGGCCGACACTATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 72 bp | TGCAGCTCCCGTAAGCGGGTCCGGCTGGAAAGACCCTaGAAAAGGTGGGTGCCACCCTTGGCCTTGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: CSSRKRVRLERP*KRWVPPLALQR Trigger: CCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTTACGGGAGCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 72 bp | CGGCTGGAAAGACCCTGCAAAAGGTGGGTGCCACCCTaGGCCTTGCAGCGGACCCGCCACATAGTGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLERPCKRWVPP*ALQRTRHIVSA Trigger: GGCCGACACTATGTGGCGGGTCCGCTGCAAGGCCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | CGATTTGGCCCTGCAGCTCCCGTAAGCGGGTCCGGCTaGAAAGACCCTGCAAAAGGTGGGTGCCACCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RFGPAAPVSGSG*KDPAKGGCHPW Trigger: CCAAGGGTGGCACCCACCTTTTGCAGGGTCTTTCCAGCCGGACCCGCTTACGGGAGCTGCAGGGCCAAATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | ACCTCTCCAAAGTTGGTATGGCCTGTCTCCCTGGCATaGTCCCTTGCTTCTGCTTGTCCGGTTAGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSPKLVWPVSLA*SLASACPVRPF Trigger: GAAGGGCCTAACCGGACAAGCAGAAGCAAGGGACCATGCCAGGGAGACAGGCCATACCAACTTTGGAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 72 bp | CACACTGGTAAAGAGGCAAGAGTTGTCTGCTGGGACTaGGGTTCTGGTAAGCACAGGCAGAGCTTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HTGKEARVVCWD*GSGKHRQSFPD Trigger: GTCAGGGAAGCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 72 bp | CAAAGTTGGTATGGCCTGTCTCCCTGGCATGGTCCCTaGCTTCTGCTTGTCCGGTTAGGCCCTTCTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: QSWYGLSPWHGP*LLLVRLGPSDR Trigger: TCTGTCAGAAGGGCCTAACCGGACAAGCAGAAGCAAGGGACCATGCCAGGGAGACAGGCCATACCAACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 90 bp | ACACCTCTCCAAAGTTGGTATGGCCTGTCTCCCTGGCATGGTCCCTaGCTTCTGCTTGTCCGGTTAGGCCCTTCTGACAGATCATGCATC | + |
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Preference number: 6 (lower is better) Translates to: TPLQSWYGLSPWHGP*LLLVRLGPSDRSCI Trigger: GATGCATGATCTGTCAGAAGGGCCTAACCGGACAAGCAGAAGCAAGGGACCATGCCAGGGAGACAGGCCATACCAACTTTGGAGAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | GTTTGGTCTTCTTCAACAATCAGCATGTCACCTGACTaGATGGGCAGGTCCCCAAGAGTGATGTCCCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: VWSSSTISMSPD*MGRSPRVMSRS Trigger: CGACCGGGACATCACTCTTGGGGACCTGCCCATCCAGTCAGGTGACATGCTGATTGTTGAAGAAGACCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS TCA 72 bp | TCTGGTTTGGTCTTCTTCAACAATCAGCATGTCACCTaGCTGGATGGGCAGGTCCCCAAGAGTGATGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SGLVFFNNQHVT*LDGQVPKSDVP Trigger: CGGGACATCACTCTTGGGGACCTGCCCATCCAGTCAGGTGACATGCTGATTGTTGAAGAAGACCAAACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS TCA 72 bp | TGGTCCCTTGCTTCTGCTTGTCCGGTTAGGCCCTTCTaGCAGATCATGCATCTCAGGGTGAAGCGGTTTACA | + |
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Preference number: 6 (lower is better) Translates to: WSLASACPVRPF*QIMHLRVKRFT Trigger: TGTAAACCGCTTCACCCTGAGATGCATGATCTGTCAGAAGGGCCTAACCGGACAAGCAGAAGCAAGGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 72 bp | GACATAGTACACACTGGTAAAGAGGCAAGAGTTGTCTaGTGGGACTGCGGTTCTGGTAAGCACAGGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: DIVHTGKEARVV*WDCGSGKHRQS Trigger: GCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTGTACTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | ATAGTACACACTGGTAAAGAGGCAAGAGTTGTCTGCTaGGACTGCGGTTCTGGTAAGCACAGGCAGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IVHTGKEARVVC*DCGSGKHRQSF Trigger: GAAGCTCTGCCTGTGCTTACCAGAACCGCAGTCCCAGCAGACAACTCTTGCCTCTTTACCAGTGTGTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | TTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTaGATTCAAGACTCCTCCTTCCACGACATAGTACAC | + |
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Preference number: 6 (lower is better) Translates to: LCYEASHLRGTS*IQDSSFHDIVH Trigger: GTGTACTATGTCGTGGAAGGAGGAGTCTTGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 72 bp | CGCCTCACTATACAAGACTGGATCACTTGCTACAATTaGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: RLTIQDWITCYN*CYEASHLRGTS Trigger: GCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CAA 90 bp | TCCCAGTATCGCCTCACTATACAAGACTGGATCACTTGCTACAATTaGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: SQYRLTIQDWITCYN*CYEASHLRGTSWIQ Trigger: TTGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGATACTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS GCA 72 bp | TCCCAGTATCGCCTCACTATACAAGACTGGATCACTTaGTACAATTTGTGCTATGAGGCGTCTCATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SQYRLTIQDWIT*YNLCYEASHLR Trigger: CCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGATACTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS TCA 72 bp | TATACAAGACTGGATCACTTGCTACAATTTGTGCTATaGGGCGTCTCATCTCAGGGGCACAAGCTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: YTRLDHLLQFVL*GVSSQGHKLDS Trigger: TGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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| CDS CCA 72 bp | GTTTGTCTTTCCCAGTATCGCCTCACTATACAAGACTaGATCACTTGCTACAATTTGTGCTATGAGGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: VCLSQYRLTIQD*ITCYNLCYEAS Trigger: AGACGCCTCATAGCACAAATTGTAGCAAGTGATCCAGTCTTGTATAGTGAGGCGATACTGGGAAAGACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049813.6 |
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