Pregenerated sensors for YME1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026775Ensembl transcript IDs: ENSMUST00000028117.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GTGCCAAGAATGATGCACCCAGAGGCTCAGGTGGAAGGATGTCAGTaGGAGGCTAGCCTAGGCTACAAAACAGAACTTTCTGGAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VPRMMHPEAQVEGCQ*EASLGYKTELSGKD Trigger: GTCCTTTCCAGAAAGTTCTGTTTTGTAGCCTAGGCTAGCCTCCAACTGACATCCTTCCACCTGAGCCTCTGGGTGCATCATTCTTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR TCA 90 bp | TATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGAGATGGTAGCGTCAGGAGTGGGGGTTaGAAAATGTTGCAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YPQHCFPHREMLLSGDGSVRSGG*KMLQRR Trigger: TCTCCTTTGCAACATTTTTCAACCCCCACTCCTGAC...GCTACCATCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGAAAAGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTAACCCAGAGGCTCAGGTaGAAGGATGTCAGTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FEKSQLQTSTKPKQPTILTQRLR*KDVSWR Trigger: CCTCCAACTGACATCCTTCCACCTGAGCCTCTGGGT...TAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCTTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR TCA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTCACACTATGGTCTACTaGTCTGAATATGAAATTACC | + |
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Preference number: 2 (lower is better) Translates to: DQPLTSLKLLATLQDTISHTMVY*SEYEIT Trigger: GGTAATTTCATATTCAGATCAGTAGACCATAGTGTG...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTATGACTCCAATGGGACAGAAGATTaGCAAAGTGTTTCACATCCT | + |
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Preference number: 2 (lower is better) Translates to: RVNYKPQRNQNNQPFYDSNGTED*QSVSHP Trigger: AGGATGTGAAACACTTTGTCAATCTTCTGTCCCATT...GGAGTCATAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGAAAAGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTAGGGGTTGAAAAATGTTaGAAAGGAGACTGCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: FEKSQLQTSTKPKQPTILGVEKC*KGDCRT Trigger: AGTCCTGCAGTCTCCTTTGCAACATTTTTCAACCCC...TAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCTTTTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGAGATGGTAGCTATCCTTTCACGTATTTaGTATGAGTTACTAATCTCC | + |
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Preference number: 2 (lower is better) Translates to: IHSIVFPTEKCYYQEMVAILSRI*YELLIS Trigger: GGAGATTAGTAACTCATAGCAAATACGTGAAAGGAT...AGCTACCATCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAAAGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTAAGTGTGATCTTTCTGTaGTATGAGAAACCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: FEKSQLQTSTKPKQPTILSVIFL*YEKPRG Trigger: TCCTCTGGGTTTCTCATATCACAGAAAGATCACACT...TAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCTTTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAAATACCAAGTCAGGAGTaGGGGTTGAAAAATGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SEVRLDKTPMFFHMCMHEIPSQE*GLKNVA Trigger: TGCAACATTTTTCAACCCCCACTCCTGACTTGGTAT...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAAGTGTTTCACATCCTTaGATTATATACCAAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VEMIYPQHCFPHREMLLSSVSHP*IIYQVR Trigger: CCTGACTTGGTATATAATTCAAGGATGTGAAACACT...TGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR GCA 72 bp | CTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTaGCAACTCAGGGCAGCTCCTAGTCCCAAGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LNLTQNMILWWS*QLRAAPSPKFK Trigger: TTTGAACTTGGGACTAGGAGCTGCCCTGAGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR-3UTR CAA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTGATTTATCCACAGCATaGTTTTCCCCACAGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: DQPLTSLKLLATLQDTISDLSTA*FSPQRN Trigger: ATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATC...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR TCA 72 bp | CCCTATAATGTGCAGATGGAACAAGCCTTCCAATTCTaGCAAGGCGACAGAGAAAGATCATTTTTGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: PYNVQMEQAFQF*QGDRERSFLKG Trigger: TCCTTTCAAAAATGATCTTTCTCTGTCGCCTTGTCAGAATTGGAAGGCTTGTTCCATCTGCACATTATAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTATGACTCCGACGTCAGCTTCTCCTaGCACAGCTCGGGCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RVNYKPQRNQNNQPFYDSDVSFS*HSSGKK Trigger: CTTCTTGCCCGAGCTGTGGCAGGAGAAGCTGACGTC...GGAGTCATAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTATGACTCCGCTAACATCCATCTGTaGAAGCAGCTGGGCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: RVNYKPQRNQNNQPFYDSANIHL*KQLGSS Trigger: ACTCGAGCCCAGCTGCTTGCACAGATGGATGTTAGC...GGAGTCATAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGGAACAAGCCTTCCAATTCTGACAAGGCGACAGAGAAAGATCATTTTTTACATGCCCAAGTGTTaGCCCTCGAGGCATGATTGT | + |
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Preference number: 4 (lower is better) Translates to: ADGTSLPILTRRQRKIIFYMPKC*PSRHDC Trigger: ACAATCATGCCTCGAGGGCCAACACTTGGGCATGTA...AAAAATGATCTTTCTCTGTCGCCTTGTCAGAATTGGAAGGCTTGTTCCATCTGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTGTGACATTTTTCATCTaGACAGGGTCTACCGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DQPLTSLKLLATLQDTISVTFFI*TGSTAE Trigger: TTCTGCGGTAGACCCTGTCCAGATGAAAAATGTCAC...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTATTTCAGCAAGAAGCTaGTTGATCGTCTGCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DQPLTSLKLLATLQDTISISARS*LIVCLE Trigger: TTCAAGGCAGACGATCAATCAGCTTCTTGCTGAAAT...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | ATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGAGATGGTAGCTCAGTCCCTCGAGCTATaGTTTCTGGATCAACAGATT | + |
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Preference number: 4 (lower is better) Translates to: IHSIVFPTEKCYYQEMVAQSLEL*FLDQQI Trigger: AATCTGTTGATCCAGAAATCATAGCTCGAGGGACTG...AGCTACCATCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | TATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGAGATGGTAGCCTTTCAGAGGTAGACTaGAAACGTCGTGTCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: YPQHCFPHREMLLSGDGSLSEVD*KRRVLD Trigger: ATCAAGGACACGACGTTTGCAGTCTACCTCTGAAAG...GCTACCATCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | ATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCAACTGGCAACAGTGATACATaGCCAAGTGTTGGCCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: MKITKFNPEHDSLVVLPTGNSDT*PSVGPR Trigger: TCGAGGGCCAACACTTGGGCATGTATCACTGTTGCC...AGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTGCTTCGAAGAGTTTTTaGATGTTGCCTGTACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: DQPLTSLKLLATLQDTISASKSF*MLPVQA Trigger: AGCTTGTACAGGCAACATCCAAAAACTCTTCGAAGC...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | TTCTTCATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGAGAGGAATTGTAACCTaGGGCTGCACAGTGCTCGAC | + |
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Preference number: 4 (lower is better) Translates to: FFMKITKFNPEHDSLVVLRGIVT*GCTVLD Trigger: GTCGAGCACTGTGCAGCCTCAGGTTACAATTCCTCT...CAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCATGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | GCAGATGGAACAAGCCTTCCAATTCTGACAAGGCGACAGAGAAAGATCATTTTTAAACCCCTTCACAAATaGTGGTGCTATATTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: ADGTSLPILTRRQRKIIFKPLHK*WCYILC Trigger: GCACAGAATATAGCACCATCATTTGTGAAGGGGTTT...AAAAATGATCTTTCTCTGTCGCCTTGTCAGAATTGGAAGGCTTGTTCCATCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTCTTGGAACTGTAACTTaGATATCAAAACGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DQPLTSLKLLATLQDTISLGTVT*ISKRPG Trigger: TCCTGGTCGTTTTGATATGCAAGTTACAGTTCCAAG...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | GTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGCACAGGCTCACTACTaGGAGCTTCATGCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VEMIYPQHCFPHREMLLSAQAHY*ELHAQE Trigger: TTCCTGAGCATGAAGCTCCCAGTAGTGAGCCTGTGC...TGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR CAA 72 bp | ACATCCTTGAATTATATACCAAGTCAGGAGTGGGGGTaGAAAAATGTTGCAAAGGAGACTGCAGGACTAAGT | + |
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Preference number: 4 (lower is better) Translates to: TSLNYIPSQEWG*KNVAKETAGLS Trigger: ACTTAGTCCTGCAGTCTCCTTTGCAACATTTTTCAACCCCCACTCCTGACTTGGTATATAATTCAAGGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | TATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGAGATGGTAGCTCTCGATGCTGTTTTTaGGAAACAGGTGTATTGACA | + |
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Preference number: 4 (lower is better) Translates to: YPQHCFPHREMLLSGDGSSRCCF*ETGVLT Trigger: TGTCAATACACCTGTTTCTCAAAAACAGCATCGAGA...GCTACCATCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | ATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCAACTCAGCAAGAAGCTGATTaGTCGTCTGCCTTGAATACG | + |
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Preference number: 4 (lower is better) Translates to: MKITKFNPEHDSLVVLPTQQEAD*SSALNT Trigger: CGTATTCAAGGCAGACGATCAATCAGCTTCTTGCTG...AGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | GCAGATGGAACAAGCCTTCCAATTCTGACAAGGCGACAGAGAAAGATCATTTTTAGGAACGTAATGTACTaGACATATCTAAGTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: ADGTSLPILTRRQRKIIFRNVMY*TYLSDH Trigger: ATGGTCACTTAGATATGTTCAGTACATTACGTTCCT...AAAAATGATCTTTCTCTGTCGCCTTGTCAGAATTGGAAGGCTTGTTCCATCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTATGACTCCAACCCCGAGACTGTATaGAAACTGGAAAATACTGAA | + |
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Preference number: 4 (lower is better) Translates to: RVNYKPQRNQNNQPFYDSNPETV*KLENTE Trigger: TTCAGTATTTTCCAGTTTTCATACAGTCTCGGGGTT...GGAGTCATAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | TTCTTCATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGATTGATCGTCTGCCTTaGATACGGGTGCATTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FFMKITKFNPEHDSLVVLIDRLP*IRVHWR Trigger: TCTCCAATGCACCCGTATTCAAGGCAGACGATCAAT...CAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCATGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAACTACTGGGAGCTTCATaGTCAGGAACTGTATCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SEVRLDKTPMFFHMCMHELLGAS*SGTVSR Trigger: TCGAGATACAGTTCCTGAGCATGAAGCTCCCAGTAG...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAATCGACCCTTCACATCTaGCCTTGGAACTGTAACTTG | + |
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Preference number: 4 (lower is better) Translates to: SEVRLDKTPMFFHMCMHESTLHI*PWNCNL Trigger: CAAGTTACAGTTCCAAGGCCAGATGTGAAGGGTCGA...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | AGTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAAGATTCTCCAACTCTaGTCCAGAGAACCCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: SRNDLSTALFSPQRNVTIKILQL*SREPNS Trigger: ACTGTTGGGTTCTCTGGAGCAGAGTTGGAGAATCTT...GATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | ATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCAACTAAAGCATTGATGAGATaGCTGAGAGGAATTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: MKITKFNPEHDSLVVLPTKALMR*LRGIVT Trigger: GGTTACAATTCCTCTCAGTCATCTCATCAATGCTTT...AGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | GTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCACAAACGTCGTGTCCTTaGTTTCAACGTTTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: VEMIYPQHCFPHREMLLSQTSCP*FQRFET Trigger: GGTTTCAAAACGTTGAAATCAAGGACACGACGTTTG...TGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | AGTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCCTCCTTCATTGGGTTTaGAACCATCCATTTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SRNDLSTALFSPQRNVTILLHWV*NHPFQQ Trigger: TTGCTGAAATGGATGGTTTCAAACCCAATGAAGGAG...GATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | AGTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCTGCCTTGAATACGGGTaGATTGGAGATTCAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRNDLSTALFSPQRNVTICLEYG*IGDSIL Trigger: GAGAATTGAATCTCCAATGCACCCGTATTCAAGGCA...GATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | GTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAGGTCAGCAATGCTTCTaGCAGGTTCTTATGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VEMIYPQHCFPHREMLLSGQQCF*QVLMFF Trigger: AAAGAACATAAGAACCTGGCAGAAGCATTGCTGACC...TGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CCA 90 bp | TTCTTCATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCTTCACATCTGGCCTTaGAACTGTAACTTGCATATC | + |
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Preference number: 4 (lower is better) Translates to: FFMKITKFNPEHDSLVVLLHIWP*NCNLHI Trigger: GATATGCAAGTTACAGTTCCAAGGCCAGATGTGAAG...CAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCATGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR TCA 90 bp | ATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCAACTGCACCAGTTGTAATATaGTCAGTTCCAAATATGAGT | + |
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Preference number: 4 (lower is better) Translates to: MKITKFNPEHDSLVVLPTAPVVI*SVPNMS Trigger: ACTCATATTTGGAACTGATCATATTACAACTGGTGC...AGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | GTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAAGAGTTTTTGGATGTTaGCTGTACAAGCTAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VEMIYPQHCFPHREMLLSRVFGC*LYKLEE Trigger: TTCCTCTAGCTTGTACAGGCAACATCCAAAAACTCT...TGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| 3UTR CAA 72 bp | TCTACTAATGTAAGTAGAAATGATTTATCCACAGCATaGTTTTCCCCACAGAGAAATGTTACTATCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: STNVSRNDLSTA*FSPQRNVTIRR Trigger: TCTCCTGATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACTTACATTAGTAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAATTAAGAGTCCATAAATaGCAAACAGGAGCAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: SEVRLDKTPMFFHMCMHELRVHK*QTGAKQ Trigger: TTGTTTTGCTCCTGTTTGGCATTTATGGACTCTTAA...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR GCA 90 bp | AGTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCAACACAAGGAGCATTTaGTTTTGCTTCTCTAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SRNDLSTALFSPQRNVTINTRSI*FCFSKK Trigger: CTTTTTAGAGAAGCAAAAGCAAATGCTCCTTGTGTT...GATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS TCA 90 bp | TCTGATCCTGCTGGCTCCTACGCCCACAAACATCTCATCAAACTCTaGTCCAGAAGCATAATAAAAAGGGACGTCAGCTTCTCCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SDPAGSYAHKHLIKL*SRSIIKRDVSFSCH Trigger: GTGGCAGGAGAAGCTGACGTCCCTTTTTATTATGCTTCTGGATCAGAGTTTGATGAGATGTTTGTGGGCGTAGGAGCCAGCAGGATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS GCA 90 bp | AAAATTTCAGTTCGACCCTTCACATCTGGCCTTGGAACTGTAACTTaGATATCAAAACGACCAGGACGTATTAAGGCATTATCTAATGCC | + |
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Preference number: 5 (lower is better) Translates to: KISVRPFTSGLGTVT*ISKRPGRIKALSNA Trigger: GGCATTAGATAATGCCTTAATACGTCCTGGTCGTTTTGATATGCAAGTTACAGTTCCAAGGCCAGATGTGAAGGGTCGAACTGAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS CCA 90 bp | CTTGTTGAGATACCATTTCAAAATTTCAGTTCGACCCTTCACATCTaGCCTTGGAACTGTAACTTGCATATCAAAACGACCAGGACGTAT | + |
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Preference number: 5 (lower is better) Translates to: LVEIPFQNFSSTLHI*PWNCNLHIKTTRTY Trigger: ATACGTCCTGGTCGTTTTGATATGCAAGTTACAGTTCCAAGGCCAGATGTGAAGGGTCGAACTGAAATTTTGAAATGGTATCTCAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | GATCAGCCGCTTACTAGCCTAAAACTGTTGGCTACTCTGCAAGATACAATCAGTATGATTACTCCTTCATaGGGTTTGAAACCATCCATT | + |
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Preference number: 5 (lower is better) Translates to: DQPLTSLKLLATLQDTISMITPS*GLKPSI Trigger: AATGGATGGTTTCAAACCCAATGAAGGAGTAATCAT...ACTGATTGTATCTTGCAGAGTAGCCAACAGTTTTAGGCTAGTAAGCGGCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | AGTAGAAATGATTTATCCACAGCATTGTTTTCCCCACAGAGAAATGTTACTATCTCCTGTAACTCTTGTTaGGCTTCCTCCACCCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: SRNDLSTALFSPQRNVTISCNSC*ASSTPL Trigger: TAAAGGGGTGGAGGAAGCCAAACAAGAGTTACAGGA...GATAGTAACATTTCTCTGTGGGGAAAACAATGCTGTGGATAAATCATTTCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAAAGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTACGCCTTAAGGAATCATaGGTCTTCTGTGTAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: FEKSQLQTSTKPKQPTILRLKES*VFCVRA Trigger: AGCTCTTACACAGAAGACCAATGATTCCTTAAGGCG...TAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCTTTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TTCTTCATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCTTGGAACTGTAACTaGCATATCAAAACGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FFMKITKFNPEHDSLVVLPWNCN*HIKTTR Trigger: CCTGGTCGTTTTGATATGCAAGTTACAGTTCCAAGG...CAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCATGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TTCTTCATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCTTGATTTCAACGTTTaGAAACCCCGAGACTGTATG | + |
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Preference number: 5 (lower is better) Translates to: FFMKITKFNPEHDSLVVLLDFNV*KPRDCM Trigger: CATACAGTCTCGGGGTTTCAAAACGTTGAAATCAAG...CAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCATGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | ATGAAAATCACTAAATTTAACCCAGAACATGATTCTTTGGTGGTCCTGCCAACTTTGAATACGGGTGCATaGGAGATTCAATTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: MKITKFNPEHDSLVVLPTLNTGA*EIQFSF Trigger: GAAAGAGAATTGAATCTCCAATGCACCCGTATTCAA...AGTTGGCAGGACCACCAAAGAATCATGTTCTGGGTTAAATTTAGTGATTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAAACTCCTTCATTGGGTTaGAAACCATCCATTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SEVRLDKTPMFFHMCMHETPSLG*KPSISA Trigger: TGCTGAAATGGATGGTTTCAAACCCAATGAAGGAGT...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAAAGAGTCAACTACAAACCTCAACGAAACCAAAACAACCAACCATTCTAATCTCGATGCTGTTTTaGAGAAACAGGTGTATTGAC | + |
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Preference number: 5 (lower is better) Translates to: FEKSQLQTSTKPKQPTILISMLF*RNRCID Trigger: GTCAATACACCTGTTTCTCAAAAACAGCATCGAGAT...TAGAATGGTTGGTTGTTTTGGTTTCGTTGAGGTTTGTAGTTGACTCTTTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS-3UTR CAA 90 bp | TCTGAAGTCAGGTTAGATAAAACACCGATGTTTTTCCATATGTGTATGCATGAAACTAAAAGAATTCCTTaGGGAAGTTTACCTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SEVRLDKTPMFFHMCMHETKRIP*GSLPPS Trigger: GCTTGGAGGTAAACTTCCCAAAGGAATTCTTTTAGT...TTCATGCATACACATATGGAAAAACATCGGTGTTTTATCTAACCTGACTTCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS GCA 72 bp | TCCAGAAGCATAATAAAAAGGGACGTCAGCTTCTCCTaGCACAGCTCGGGCAAGAAGCGTCTTCCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSIIKRDVSFS*HSSGKKRLPCS Trigger: GGAACAGGGAAGACGCTTCTTGCCCGAGCTGTGGCAGGAGAAGCTGACGTCCCTTTTTATTATGCTTCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS TCA 72 bp | GCTGGCTCCTACGCCCACAAACATCTCATCAAACTCTaGTCCAGAAGCATAATAAAAAGGGACGTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AGSYAHKHLIKL*SRSIIKRDVSF Trigger: GAAGCTGACGTCCCTTTTTATTATGCTTCTGGATCAGAGTTTGATGAGATGTTTGTGGGCGTAGGAGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS GCA 72 bp | GTTCGACCCTTCACATCTGGCCTTGGAACTGTAACTTaGATATCAAAACGACCAGGACGTATTAAGGCATTA | + |
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Preference number: 6 (lower is better) Translates to: VRPFTSGLGTVT*ISKRPGRIKAL Trigger: TAATGCCTTAATACGTCCTGGTCGTTTTGATATGCAAGTTACAGTTCCAAGGCCAGATGTGAAGGGTCGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS TCA 72 bp | ATCCATTTCAGCAAGAAGCTGATTGATCGTCTGCCTTaGATACGGGTGCATTGGAGATTCAATTCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IHFSKKLIDRLP*IRVHWRFNSLS Trigger: GGAAAGAGAATTGAATCTCCAATGCACCCGTATTCAAGGCAGACGATCAATCAGCTTCTTGCTGAAATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS TCA 72 bp | ACTCTGCTCCAGAGAACCCAACAGTCCCTCGAGCTATaGTTTCTGGATCAACAGATTTATCAAACTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: TLLQRTQQSLEL*FLDQQIYQTLS Trigger: AGATAAAGTTTGATAAATCTGTTGATCCAGAAATCATAGCTCGAGGGACTGTTGGGTTCTCTGGAGCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS GCA 72 bp | AGATCTGAACAAATGCTTCGAAGAGTTTTTGGATGTTaGCTGTACAAGCTAGAGGAACGTAATGTACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RSEQMLRRVFGC*LYKLEERNVLN Trigger: GTTCAGTACATTACGTTCCTCTAGCTTGTACAGGCAACATCCAAAAACTCTTCGAAGCATTTGTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS CCA 72 bp | ATACCATTTCAAAATTTCAGTTCGACCCTTCACATCTaGCCTTGGAACTGTAACTTGCATATCAAAACGACC | + |
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Preference number: 6 (lower is better) Translates to: IPFQNFSSTLHI*PWNCNLHIKTT Trigger: GGTCGTTTTGATATGCAAGTTACAGTTCCAAGGCCAGATGTGAAGGGTCGAACTGAAATTTTGAAATGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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| CDS CAA 90 bp | CGAGCTATGATTTCTGGATCAACAGATTTATCAAACTTTATCTTGTaGAGATACCATTTCAAAATTTCAGTTCGACCCTTCACATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAMISGSTDLSNFIL*RYHFKISVRPFTSG Trigger: GCCAGATGTGAAGGGTCGAACTGAAATTTTGAAATGGTATCTCAACAAGATAAAGTTTGATAAATCTGTTGATCCAGAAATCATAGCTCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028117.4 |
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