Pregenerated sensors for YKT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002741Ensembl transcript IDs: ENSMUST00000002818.9
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTaGATCTGTGCTGTCCAGGGGCCCTGGGTTGGAGAGGTCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: QHPRPFITPQVPATH*ICAVQGPWVGEVCG Trigger: GCCACAGACCTCTCCAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 90 bp | GGGCAGTTCAGCAGGCTCAGGGTAGGGATCAGAGTGAGACAACGCTaGCTCAAAAATCAGAGGCCAGCATCCCAGCAGTGGCTTTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GQFSRLRVGIRVRQR*LKNQRPASQQWLLG Trigger: CCCCAAAAGCCACTGCTGGGATGCTGGCCTCTGATTTTTGAGCCAGCGTTGTCTCACTCTGATCCCTACCCTGAGCCTGCTGAACTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 90 bp | AGTGCCAGCAACACACTGGATCTGTGCTGTCCAGGGGCCCTGGGTTaGAGAGGTCTGTGGCAGTGGGAAAATTACATGGGCAGGTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: SASNTLDLCCPGALG*RGLWQWENYMGRSV Trigger: GACTGACCTGCCCATGTAATTTTCCCACTGCCACAGACCTCTCCAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 90 bp | CACTACCTTTCTCTGGCCATGGTGACTTTCTCCCTGCCCCCACAGTaGAAGGTAGTAGAATGCTGGAGTGTTCAGACTCTGCCCACCCCA | + |
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Preference number: 1 (lower is better) Translates to: HYLSLAMVTFSLPPQ*KVVECWSVQTLPTP Trigger: TGGGGTGGGCAGAGTCTGAACACTCCAGCATTCTACTACCTTGCACTGTGGGGGCAGGGAGAAAGTCACCATGGCCAGAGAAAGGTAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 90 bp | ACAAGAGAAAGAGGCAGCACCCCAGGCCATTTATTACACCTCAAGTaGCAGCAACACACTGGATCTGTGCTGTCCAGGGGCCCTGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: TRERGSTPGHLLHLK*QQHTGSVLSRGPGL Trigger: CAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGCTGCCTCTTTCTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR TCA 90 bp | AAGGCACCTGTGTCTGCTTCTTCCCTAAAGATGGACACTCCCAGCTaGCCCTCCCAACACCAGAACAATTCCAGCCCACACTCAGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: KAPVSASSLKMDTPS*PSQHQNNSSPHSVC Trigger: GCAGACTGAGTGTGGGCTGGAATTGTTCTGGTGTTGGGAGGGTCAGCTGGGAGTGTCCATCTTTAGGGAAGAAGCAGACACAGGTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 90 bp | CAGGTGAGTGTTCCTCCATACTGGACAGCTGAAGGCACCTGTGTCTaGTTCTTCCCTAAAGATGGACACTCCCAGCTGACCCTCCCAACA | + |
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Preference number: 1 (lower is better) Translates to: QVSVPPYWTAEGTCV*FFPKDGHSQLTLPT Trigger: TGTTGGGAGGGTCAGCTGGGAGTGTCCATCTTTAGGGAAGAAGCAGACACAGGTGCCTTCAGCTGTCCAGTATGGAGGAACACTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 90 bp | TTAGAATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTaGAGGCAAGGGAGACCCTGTAGGACAGCCATATGTAGGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LEYNGGWGTTGQLSH*RQGRPCRTAICRQR Trigger: CCTTTGCCTACATATGGCTGTCCTACAGGGTCTCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATTCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 90 bp | AATACACTCTTGCCAAGTGATTTAGCATTAGAATATAATGGGGGATaGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: NTLLPSDLALEYNGG*GTTGQLSHCRQGRP Trigger: GGGTCTCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATTCTAATGCTAAATCACTTGGCAAGAGTGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGTTACCTTCTCCCCACAAACTTCTACTGCCACCCACCTCTCCTCCTCCCCAGGGGCCCTGGGTTaGAGAGGTCTGTGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AKVTFSPQTSTATHLSSSPGALG*RGLWQW Trigger: CCACTGCCACAGACCTCTCCAACCCAGGGCCCCTGG...GGAGGAGGAGAGGTGGGTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATAGGCCCTGTCCCTGCCAGAAGCCAGTCCTACCAGGCAGGCAAGCTAAACTCCCTGCCCCCACAGTaGAAGGTAGTAGAATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RIGPVPARSQSYQAGKLNSLPPQ*KVVECW Trigger: CCAGCATTCTACTACCTTGCACTGTGGGGGCAGGGA...GTTTAGCTTGCCTGCCTGGTAGGACTGGCTTCTGGCAGGGACAGGGCCTATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGGTTACCTTCTCCCCACAAACTTCTACTGCCACCCACCTCTCCTCCTCCATGGACACTCCCAGCTaGCCCTCCCAACACCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: AKVTFSPQTSTATHLSSSMDTPS*PSQHQN Trigger: GTTCTGGTGTTGGGAGGGTCAGCTGGGAGTGTCCAT...GGAGGAGGAGAGGTGGGTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGTTACCTTCTCCCCACAAACTTCTACTGCCACCCACCTCTCCTCCTCCGTGCCAGCAACACACTaGATCTGTGCTGTCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: AKVTFSPQTSTATHLSSSVPATH*ICAVQG Trigger: CCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCAC...GGAGGAGGAGAGGTGGGTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CAA 90 bp | CAACGCTGGCTCAAAAATCAGAGGCCAGCATCCCAGCAGTGGCTTTaGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: QRWLKNQRPASQQWL*GRQDLSDIVCAQQT Trigger: GGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAAAAGCCACTGCTGGGATGCTGGCCTCTGATTTTTGAGCCAGCGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCTGCCAGCATCCCAGCAGTaGCTTTTGGGGAGACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: TPGHLLHLKCQQHTGSVLPASQQ*LLGRQD Trigger: ATCCTGTCTCCCCAAAAGCCACTGCTGGGATGCTGG...CAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGCTTTTGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACCTCCATACTGGACAGCTaGAGGCACCTGTGTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QWLLGRQDLSDIVCAQQTSILDS*RHLCLL Trigger: AAGCAGACACAGGTGCCTTCAGCTGTCCAGTATGGA...GGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAAAAGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR TCA 90 bp | GCACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCTGCTGGCACTTGTCCTaGTTTGTCCCAACATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: APQAIYYTSSASNTLDLCCWHLS*FVPTCK Trigger: CTTGCATGTTGGGACAAATCAGGACAAGTGCCAGCA...GCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGAAAGGTAGTAGAATGCTaGAGTGTTCAGACTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGKVVEC*SVQTLP Trigger: GGGCAGAGTCTGAACACTCCAGCATTCTACTACCTT...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | AGTATCCAGAGAAATAGACAGGTACACCAACTAGTGGGGACTTTTGGAAGCCACGGAGTGTTCAGACTCTaGCCACCCCAGCCCTATCAC | + |
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Preference number: 2 (lower is better) Translates to: SIQRNRQVHQLVGTFGSHGVFRL*PPQPYH Trigger: GTGATAGGGCTGGGGTGGGCAGAGTCTGAACACTCC...GTGGCTTCCAAAAGTCCCCACTAGTTGGTGTACCTGTCTATTTCTCTGGATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGACTCGGATATAGTTTGTaGACAGCAGACCATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGLGYSL*TADHEE Trigger: CTCTTCATGGTCTGCTGTGCACAAACTATATCCGAG...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGACCCCCACCCCATTCATaGAGAGTTAATATCGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGPPPHS*RVNIVN Trigger: ATTCACGATATTAACTCTCCATGAATGGGGTGGGGG...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | GCACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCGGTTGGAGAGGTCTGTaGCAGTGGGAAAATTACATG | + |
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Preference number: 2 (lower is better) Translates to: APQAIYYTSSASNTLDLCGWRGL*QWENYM Trigger: CATGTAATTTTCCCACTGCCACAGACCTCTCCAACC...GCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | GCACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCTGCAAGGTAGTAGAATaGTGGAGTGTTCAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: APQAIYYTSSASNTLDLCCKVVE*WSVQTL Trigger: CAGAGTCTGAACACTCCAGCATTCTACTACCTTGCA...GCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAACAAGCTCCAGGCAGTTaGCAAAACACTCTTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: STPQPLNILYSATVSDREQAPGS*QNTLVD Trigger: GTCCACAAGAGTGTTTTGGCAACTGCCTGGAGCTTG...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGATCCCTCCATTCCTCTTaGGAACTTCAAAATAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGSLHSS*ELQNKS Trigger: GCTTTTATTTTGAAGTTCCCAAGAGGAATGGAGGGA...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR GCA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAAGAAGGCACCTGTGTCTaGTTCTTCCCTAAAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: STPQPLNILYSATVSDREEGTCV*FFPKDG Trigger: TCCATCTTTAGGGAAGAAGCAGACACAGGTGCCTTC...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CCA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAACCCAACATTACATCTTaGAGGTCCTCAAATTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: STPQPLNILYSATVSDREPNITS*RSSNSF Trigger: GAAGGAATTTGAGGACCTCCAAGATGTAATGTTGGG...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR TCA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAAACAAAGTCATCTTTGTaGTACTGGGTGAAGGTACTT | + |
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Preference number: 2 (lower is better) Translates to: STPQPLNILYSATVSDRETKSSL*YWVKVL Trigger: AAGTACCTTCACCCAGTATCACAAAGATGACTTTGT...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR TCA 72 bp | CCTCTTCTAGACACTGCTTGTCGCCAGGGGCTGATGTaGCGTGACGATCCAGCGCCTGCCTCCGTGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: PLLDTACRQGLM*RDDPAPASVGY Trigger: GTAGCCCACGGAGGCAGGCGCTGGATCGTCACGTCACATCAGCCCCTGGCGACAAGCAGTGTCTAGAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CAA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGATCCAGGGGCCCTGGGTaGGAGAGGTCTGTGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGSRGPG*ERSVAV Trigger: CACTGCCACAGACCTCTCCAACCCAGGGCCCCTGGA...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | GGAACCGGGCACACTCTGGATTCACCATGTAGGCTGTaGTCGCAGTGGCACCAGCTCAGATCAACCCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GTGHTLDSPCRL*SQWHQLRSTPQ Trigger: TTGAGGGGTTGATCTGAGCTGGTGCCACTGCGAGCACAGCCTACATGGTGAATCCAGAGTGTGCCCGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | AATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTaGAGGCAAGGGAGACCCTGTAGGACAGCCATATGT | + |
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Preference number: 3 (lower is better) Translates to: NGGWGTTGQLSH*RQGRPCRTAIC Trigger: ACATATGGCTGTCCTACAGGGTCTCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | ACTTTCTCCCTGCCCCCACAGTGCAAGGTAGTAGAATaGTGGAGTGTTCAGACTCTGCCCACCCCAGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: TFSLPPQCKVVE*WSVQTLPTPAL Trigger: TAGGGCTGGGGTGGGCAGAGTCTGAACACTCCAGCATTCTACTACCTTGCACTGTGGGGGCAGGGAGAAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | AGAGGCAGCACCCCAGGCCATTTATTACACCTCAAGTaGCAGCAACACACTGGATCTGTGCTGTCCAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RGSTPGHLLHLK*QQHTGSVLSRG Trigger: GCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGCTGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | TTCTCCCTGCCCCCACAGTGCAAGGTAGTAGAATGCTaGAGTGTTCAGACTCTGCCCACCCCAGCCCTATCA | + |
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Preference number: 3 (lower is better) Translates to: FSLPPQCKVVEC*SVQTLPTPALS Trigger: TGATAGGGCTGGGGTGGGCAGAGTCTGAACACTCCAGCATTCTACTACCTTGCACTGTGGGGGCAGGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | AGCAGGCTCAGGGTAGGGATCAGAGTGAGACAACGCTaGCTCAAAAATCAGAGGCCAGCATCCCAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SRLRVGIRVRQR*LKNQRPASQQW Trigger: CCACTGCTGGGATGCTGGCCTCTGATTTTTGAGCCAGCGTTGTCTCACTCTGATCCCTACCCTGAGCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | CCAGCAACACACTGGATCTGTGCTGTCCAGGGGCCCTaGGTTGGAGAGGTCTGTGGCAGTGGGAAAATTACA | + |
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Preference number: 3 (lower is better) Translates to: PATHWICAVQGP*VGEVCGSGKIT Trigger: TGTAATTTTCCCACTGCCACAGACCTCTCCAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | CACACTCTGGATTCACCATGTAGGCTGTGCTCGCAGTaGCACCAGCTCAGATCAACCCCTCAACCCCTCAAT | + |
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Preference number: 3 (lower is better) Translates to: HTLDSPCRLCSQ*HQLRSTPQPLN Trigger: ATTGAGGGGTTGAGGGGTTGATCTGAGCTGGTGCCACTGCGAGCACAGCCTACATGGTGAATCCAGAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | AGGCCATTTATTACACCTCAAGTGCCAGCAACACACTaGATCTGTGCTGTCCAGGGGCCCTGGGTTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RPFITPQVPATH*ICAVQGPWVGE Trigger: CTCTCCAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR TCA 72 bp | GTGTCTGCTTCTTCCCTAAAGATGGACACTCCCAGCTaGCCCTCCCAACACCAGAACAATTCCAGCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: VSASSLKMDTPS*PSQHQNNSSPH Trigger: GTGTGGGCTGGAATTGTTCTGGTGTTGGGAGGGTCAGCTGGGAGTGTCCATCTTTAGGGAAGAAGCAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | TCTCTGGCCATGGTGACTTTCTCCCTGCCCCCACAGTaGAAGGTAGTAGAATGCTGGAGTGTTCAGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: SLAMVTFSLPPQ*KVVECWSVQTL Trigger: CAGAGTCTGAACACTCCAGCATTCTACTACCTTGCACTGTGGGGGCAGGGAGAAAGTCACCATGGCCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | GTCCAACTGCAAGTCCAGGTGAGTGTTCCTCCATACTaGACAGCTGAAGGCACCTGTGTCTGCTTCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: VQLQVQVSVPPY*TAEGTCVCFFP Trigger: AGGGAAGAAGCAGACACAGGTGCCTTCAGCTGTCCAGTATGGAGGAACACTCACCTGGACTTGCAGTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACCATGAAGAGGGCAAGCTCCAGGCAGTaGCCAAAACACTCTTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LGRQDLSDIVCAQQTMKRASSRQ*PKHSCG Trigger: TCCACAAGAGTGTTTTGGCAACTGCCTGGAGCTTGC...CCTCTTCATGGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR TCA 72 bp | TCGGATATAGTTTGTGCACAGCAGACCATGAAGAGGTaGTGTGGAACCGGGCACACTCTGGATTCACCATGT | + |
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Preference number: 3 (lower is better) Translates to: SDIVCAQQTMKR*CGTGHTLDSPC Trigger: ACATGGTGAATCCAGAGTGTGCCCGGTTCCACATCACCTCTTCATGGTCTGCTGTGCACAAACTATATCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CCA 72 bp | TTGCCAAGTGATTTAGCATTAGAATATAATGGGGGATaGGGAACCACTGGGCAACTCTCCCACTGCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LPSDLALEYNGG*GTTGQLSHCRQ Trigger: TTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATTCTAATGCTAAATCACTTGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR-3UTR CAA 90 bp | ATATGTAGGCAAAGGTTACCTTCTCCCCACAAACTTCTACTGCCACCCACCTCTTCCCAACATTACATCTaGGAGGTCCTCAAATTCCTT | + |
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Preference number: 3 (lower is better) Translates to: ICRQRLPSPHKLLLPPTSSQHYI*EVLKFL Trigger: AAGGAATTTGAGGACCTCCAAGATGTAATGTTGGGA...AGAGGTGGGTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGCCTACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR GCA 72 bp | GTCCTGATTTGTCCCAACATGCAAGCTCCAGGCAGTTaGCAAAACACTCTTGTGGACCAGAGACAAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: VLICPNMQAPGS*QNTLVDQRQIK Trigger: TTTTATTTGTCTCTGGTCCACAAGAGTGTTTTGGCAACTGCCTGGAGCTTGCATGTTGGGACAAATCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR GCA 90 bp | CAGTGGCTTTTGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACCAGCAATGACCACACCTaGCAGACTGTCGCTCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QWLLGRQDLSDIVCAQQTSNDHT*QTVAPD Trigger: GTCCGGAGCGACAGTCTGGCAGGTGTGGTCATTGCT...GGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAAAAGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CCA 90 bp | GCACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCCCTGCACTTTACTCATaGGATCAGCTTCTCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: APQAIYYTSSASNTLDLCPALYS*DQLLGG Trigger: ACCCCCGAGAAGCTGATCCCATGAGTAAAGTGCAGG...GCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR GCA 90 bp | GGTAGTAGAATGCTGGAGTGTTCAGACTCTGCCCACCCCAGCCCTATCACCCCAGACTCCATGGTGTTGTaGAGAATGATTTTGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSRMLECSDSAHPSPITPDSMVL*RMILVS Trigger: CGAGACCAAAATCATTCTGCACAACACCATGGAGTC...TGGGGTGATAGGGCTGGGGTGGGCAGAGTCTGAACACTCCAGCATTCTACTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACCATGAAGAGGAGCCGGGGATCCTACTaGCCAGTCTATTCTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGRQDLSDIVCAQQTMKRSRGSY*PVYSIH Trigger: GTGGATAGAATAGACTGGCCAGTAGGATCCCCGGCT...CCTCTTCATGGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CAA 72 bp | GTGGCTTTTGGGGAGACAGGATCTCTCGGATATAGTTaGTGCACAGCAGACCATGAAGAGGTGATGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VAFGETGSLGYS*CTADHEEVMWN Trigger: GTTCCACATCACCTCTTCATGGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAAAAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| 3UTR CAA 72 bp | CTCAAAAATCAGAGGCCAGCATCCCAGCAGTGGCTTTaGGGGAGACAGGATCTCTCGGATATAGTTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LKNQRPASQQWL*GRQDLSDIVCA Trigger: TGCACAAACTATATCCGAGAGATCCTGTCTCCCCAAAAGCCACTGCTGGGATGCTGGCCTCTGATTTTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCTGTGCACACTGGACCTCTaGAAGAAACTAAAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: TPGHLLHLKCQQHTGSVLCTLDL*KKLKED Trigger: GTCTTCCTTTAGTTTCTTCCAGAGGTCCAGTGTGCA...CAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR GCA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAAAAGGTCATGAATTCCTaGACACTGGACCTCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: STPQPLNILYSATVSDREKVMNS*TLDLWK Trigger: CTTCCAGAGGTCCAGTGTGCAGGAATTCATGACCTT...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR GCA 90 bp | AATATAATGGGGGATGGGGAACCACTGGGCAACTCTCCCACTGCAGGCAAGGGATCTATTCTATCCACCTaGTTGGAGAATTCATCTAGT | + |
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Preference number: 4 (lower is better) Translates to: NIMGDGEPLGNSPTAGKGSILST*LENSSS Trigger: ACTAGATGAATTCTCCAAGCAGGTGGATAGAATAGA...TCCCTTGCCTGCAGTGGGAGAGTTGCCCAGTGGTTCCCCATCCCCCATTATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGCAACAAGAGAAAGAGGCAGCACCCCAGGCCATTTATTACACCTCAAGTCGTTCCACAATCAGTTaGCTTGTAAAGGTCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: PEQQEKEAAPQAIYYTSSRSTIS*LVKVMN Trigger: ATTCATGACCTTTACAAGTCAACTGATTGTGGAACG...ACTTGAGGTGTAATAAATGGCCTGGGGTGCTGCCTCTTTCTCTTGTTGCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR TCA 90 bp | TTCCCAACATTACATCTTGGAGGTCCTCAAATTCCTTCCCAAAGTCACAACCACGATACTCTTGTTCTTTaGCAGAAGCTCTGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FPTLHLGGPQIPSQSHNHDTLVL*QKLCCL Trigger: AAGGCAGCAGAGCTTCTGTCAAAGAACAAGAGTATC...GTGGTTGTGACTTTGGGAAGGAATTTGAGGACCTCCAAGATGTAATGTTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR GCA 90 bp | TCATGGAGAGTTAATATCGTGAATGCACAAATGAATCCTAAGTCATACCAAGGATCGTCCAGTTCGGCCTaGACTTTACTCATGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: SWRVNIVNAQMNPKSYQGSSSSA*TLLMGS Trigger: TGATCCCATGAGTAAAGTGCAGGCCGAACTGGACGA...TCCTTGGTATGACTTAGGATTCATTTGTGCATTCACGATATTAACTCTCCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CCA 90 bp | CTTAAAGCATCCCTCCATTCCTCTTGGGAACTTCAAAATAAAAGCAGCCAGTCTTTCTATCCACCTGCTTaGAGAATTCATCTAGTACCT | + |
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Preference number: 4 (lower is better) Translates to: LKASLHSSWELQNKSSQSFYPPA*RIHLVP Trigger: AGGTACTAGATGAATTCTCCAAGCAGGTGGATAGAA...AGACTGGCTGCTTTTATTTTGAAGTTCCCAAGAGGAATGGAGGGATGCTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS GCA 90 bp | GAAGGCCACTCTGGAAGGGTATTCGCTGTCAGCAATGACCACACCTaGCAGACTGTCGCTCCGGACGTAGACATGGCAAAGATACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: EGHSGRVFAVSNDHT*QTVAPDVDMAKILL Trigger: CAAGAGTATCTTTGCCATGTCTACGTCCGGAGCGACAGTCTGGCAGGTGTGGTCATTGCTGACAGCGAATACCCTTCCAGAGTGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CAA 90 bp | TTGGGGAGACAGGATCTCTCGGATATAGTTTGTGCACAGCAGACCATGAAGAGGTTGTGCAGAATGATTTaGGTCTCGTCCAGTTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: LGRQDLSDIVCAQQTMKRLCRMI*VSSSSA Trigger: GGCCGAACTGGACGAGACCAAAATCATTCTGCACAA...CCTCTTCATGGTCTGCTGTGCACAAACTATATCCGAGAGATCCTGTCTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGCCATTTATTACACCTCAAGTGCCAGCAACACACTGGATCTGTGCTGTGCACAGCAAGAGTTTaGTTTCCGGGCAGTTTTATA | + |
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Preference number: 5 (lower is better) Translates to: TPGHLLHLKCQQHTGSVLCTARV*FPGSFI Trigger: TATAAAACTGCCCGGAAACAAAACTCTTGCTGTGCA...CAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CAA 90 bp | ATATGTAGGCAAAGGTTACCTTCTCCCCACAAACTTCTACTGCCACCCACCTCTAAAGACTCCATGGTGTaGTGCAGAATGATTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: ICRQRLPSPHKLLLPPTSKDSMV*CRMILV Trigger: GACCAAAATCATTCTGCACAACACCATGGAGTCTTT...AGAGGTGGGTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGCCTACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS-3UTR CAA 90 bp | TCAACCCCTCAACCCCTCAATATCCTCTACTCTGCAACTGTCTCTGATAGGGAAATGGCAAAGATACTCTaGTTCTTTGACAGAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: STPQPLNILYSATVSDREMAKIL*FFDRSS Trigger: AGAGCTTCTGTCAAAGAACAAGAGTATCTTTGCCAT...TTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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| CDS GCA 72 bp | TTGTGCAGAATGATTTTGGTCTCGTCCAGTTCGGCCTaGACTTTACTCATGGGATCAGCTTCTCGGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCRMILVSSSSA*TLLMGSASRGF Trigger: GAACCCCCGAGAAGCTGATCCCATGAGTAAAGTGCAGGCCGAACTGGACGAGACCAAAATCATTCTGCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002818.9 |
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