Pregenerated sensors for YJU2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003208Ensembl transcript IDs: ENSMUST00000086869.6, ENSMUST00000233661.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTGTCTGTCCTGGGGTGCCTGGGGACACTGCTTCTCCGTACACTaGCAGGCCATGGCAGAGATGGTCCCGAGGCCTTTGCTGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: GCLSWGAWGHCFSVH*QAMAEMVPRPLLKV Trigger: CACCTTCAGCAAAGGCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTACGGAGAAGCAGTGTCCCCAGGCACCCCAGGACAGACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR TCA 90 bp | CCGTACACTGCCAGGCCATGGCAGAGATGGTCCCGAGGCCTTTGCTaGAGGTGCTTGCTTGATCCCATCTCCTCCTCATTTCTTGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PYTARPWQRWSRGLC*RCLLDPISSSFLGS Trigger: AGACCCAAGAAATGAGGAGGAGATGGGATCAAGCAAGCACCTTCAGCAAAGGCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTCTGTCTGTCCTGGGGTaGCTGGGGACACTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SVSDPSTGEARVWLHTPALSVLG*LGTLLL Trigger: GAGAAGCAGTGTCCCCAGGCACCCCAGGACAGACAG...AGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTACCTTACACTGCCAGGCCATaGCAGAGATGGTCCCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: DPSTGEARVWLHTPASLPYTARP*QRWSRG Trigger: GCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTA...AGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTCCAGGCTGTCTGTCCTaGGGTGCCTGGGGACACTGC | + |
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Preference number: 2 (lower is better) Translates to: DCVAFGWSPRPCVLLGDGPGCLS*GAWGHC Trigger: GCAGTGTCCCCAGGCACCCCAGGACAGACAGCCTGG...ACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTACCTCCACACTGCTTCTCCGTACACTaGCAGGCCATGGCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: STGEARVWLHTPASLPPHCFSVH*QAMAEM Trigger: CATCTCTGCCATGGCCTGGCAGTGTACGGAGAAGCA...GTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAAATTCTGCATGAAGGCCATGCTGAGAGGCCAGGCGCAGGGGTGTATGGCACTGAAGGTGCTTGCTTaGTCCCATCTCCTCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: PKFCMKAMLRGQAQGCMALKVLA*SHLLLI Trigger: AATGAGGAGGAGATGGGATCAAGCAAGCACCTTCAG...TGCCATACACCCCTGCGCCTGGCCTCTCAGCATGGCCTTCATGCAGAATTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTGTGGCTACATACGCCTaGTTCTCTACCTCCACACTG | + |
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Preference number: 2 (lower is better) Translates to: SVSDPSTGEARVWLHTPAVATYA*FSTSTL Trigger: CAGTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCAC...AGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTGATCTGTGGCAGGAAGGGACCGGCCAACAGGCTCCACACAACTCAAGGCTGAAGGTGCTTGCTTaGTCCCATCTCCTCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: CSDLWQEGTGQQAPHNSRLKVLA*SHLLLI Trigger: AATGAGGAGGAGATGGGATCAAGCAAGCACCTTCAG...CCTTGAGTTGTGTGGAGCCTGTTGGCCGGTCCCTTCCTGCCACAGATCAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR GCA 90 bp | CACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATTGCTTCTCCGTACACTaGCAGGCCATGGCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: HDCVAFGWSPRPCVLLGDCFSVH*QAMAEM Trigger: CATCTCTGCCATGGCCTGGCAGTGTACGGAGAAGCA...ATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACATACACTGCCAGGCCATaGCAGAGATGGTCCCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PPHCAWLTSFYRTDSASTYTARP*QRWSRG Trigger: GCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTA...TGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGAGTCAGACTGTGTTCTaGTCTGTGGCAGGAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TVLHSDGAPGLVYCWEMVSQTVF*SVAGRD Trigger: GTCCCTTCCTGCCACAGATCAGAACACAGTCTGACT...CACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTCTTGTTTTGTTTAAACAGCACGACTGTGTTGCATTCGGATGGAGCCCCAGGCTGTCTGTCCTaGGGTGCCTGGGGACACTGC | + |
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Preference number: 2 (lower is better) Translates to: SFFLFCLNSTTVLHSDGAPGCLS*GAWGHC Trigger: GCAGTGTCCCCAGGCACCCCAGGACAGACAGCCTGG...GGCTCCATCCGAATGCAACACAGTCGTGCTGTTTAAACAAAACAAGAAGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACACTGTGTTCTGATCTGTaGCAGGAAGGGACCGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PPHCAWLTSFYRTDSASTLCSDL*QEGTGQ Trigger: TTGGCCGGTCCCTTCCTGCCACAGATCAGAACACAG...TGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACAGTCAGACTGTGTTCTaGTCTGTGGCAGGAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TSTLCLAHFFLQNRFSLNSQTVF*SVAGRD Trigger: GTCCCTTCCTGCCACAGATCAGAACACAGTCTGACT...GTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTGCTTCCTTACAGTATCAGAACACAGACTGATGTAATCCCAAATTCTGCACTGTCTGTCCTGGGGTaGCTGGGGACACTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TLLPYSIRTQTDVIPNSALSVLG*LGTLLL Trigger: GAGAAGCAGTGTCCCCAGGCACCCCAGGACAGACAG...TGCAGAATTTGGGATTACATCAGTCTGTGTTCTGATACTGTAAGGAAGCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CAA 90 bp | ACTTTCTATTCTTTCTTCTTGTTTTGTTTAAACAGCACGACTGTGTaGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: TFYSFFLFCLNSTTV*HSDGAPGLVYCWEM Trigger: CATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTGTTTAAACAAAACAAGAAGAAAGAATAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR GCA 72 bp | TCCTGGGGTGCCTGGGGACACTGCTTCTCCGTACACTaGCAGGCCATGGCAGAGATGGTCCCGAGGCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SWGAWGHCFSVH*QAMAEMVPRPL Trigger: CAAAGGCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTACGGAGAAGCAGTGTCCCCAGGCACCCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCAGGCCTTGTGTATTGTaGGGAGATGGTGCTAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SLIPALVRRECGYIRLLLRPCVL*GDGARE Trigger: CTCCCTAGCACCATCTCCCAACAATACACAAGGCCT...GAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CCA 72 bp | TCAGTCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTaGCTACATACGCCTGCTTCTCTACCTCCACACTGT | + |
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Preference number: 3 (lower is better) Translates to: SVSDPSTGEARV*LHTPASLPPHC Trigger: ACAGTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR GCA 72 bp | GGCAGAGATGGTCCCGAGGCCTTTGCTGAAGGTGCTTaGTTGATCCCATCTCCTCCTCATTTCTTGGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GRDGPEAFAEGA*LIPSPPHFLGL Trigger: TAGACCCAAGAAATGAGGAGGAGATGGGATCAAGCAAGCACCTTCAGCAAAGGCCTCGGGACCATCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR TCA 72 bp | GAGATGGTCCCGAGGCCTTTGCTGAAGGTGCTTGCTTaGTCCCATCTCCTCCTCATTTCTTGGGTCTATGAG | + |
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Preference number: 3 (lower is better) Translates to: EMVPRPLLKVLA*SHLLLISWVYE Trigger: CTCATAGACCCAAGAAATGAGGAGGAGATGGGATCAAGCAAGCACCTTCAGCAAAGGCCTCGGGACCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CCA 72 bp | CTACATACGCCTGCTTCTCTACCTCCACACTGTGCCTaGCTCACTTCTTTCTACAGAACAGATTCAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: LHTPASLPPHCA*LTSFYRTDSAS Trigger: TGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGAAGCAGGCGTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CCA 72 bp | GTTTTGTTTAAACAGCACGACTGTGTTGCATTCGGATaGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: VLFKQHDCVAFG*SPRPCVLLGDG Trigger: ACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTGTTTAAACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTTCTTGTTTTGTTTAAACAGCACGACTGTGTTGCATTCGGATGGAGCCAGGCCTTGTGTATTGTaGGGAGATGGTGCTAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SFFLFCLNSTTVLHSDGARPCVL*GDGARE Trigger: CTCCCTAGCACCATCTCCCAACAATACACAAGGCCT...GGCTCCATCCGAATGCAACACAGTCGTGCTGTTTAAACAAAACAAGAAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR TCA 72 bp | CTCAACATTGCTTCCTTACAGTATCAGAACACAGACTaGTGTAATCCCAAATTCTGCATGAAGGCCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: LNIASLQYQNTD*CNPKFCMKAML Trigger: CAGCATGGCCTTCATGCAGAATTTGGGATTACATCAGTCTGTGTTCTGATACTGTAAGGAAGCAATGTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTCCTGGGGTGCCTGGGGACACTGCTTCTCCGTACACTGCCAGGCCATTGCTGCCACTGCTCCTaGGACATGCGGTGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSVLGCLGTLLLRTLPGHCCHCS*DMRCCR Trigger: GCGGCAGCACCGCATGTCTCAGGAGCAGTGGCAGCA...ATGGCCTGGCAGTGTACGGAGAAGCAGTGTCCCCAGGCACCCCAGGACAGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | TCAGTCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTGCTCTTGGGGGCACCTaGGGCGGTGGGCACCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SVSDPSTGEARVWLHTPAALGGT*GGGHPD Trigger: GTCGGGGTGCCCACCGCCGCAGGTGCCCCCAAGAGC...AGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGACTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTCCTGGGGTGCCTGGGGACACTGCTTCTCCGTACACTGCCAGGCCATACTGCTCCTGAGACATaGGGTGCTGCCGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LSVLGCLGTLLLRTLPGHTAPET*GAAAAW Trigger: CCATGCTGCGGCAGCACCGCATGTCTCAGGAGCAGT...ATGGCCTGGCAGTGTACGGAGAAGCAGTGTCCCCAGGCACCCCAGGACAGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | CCGGCCAACAGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTCCTGGAAGTTGCGCGTaGCCCCGTGCTCCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PANRLHTTQGLKERARLSPGSCA*PRAPWC Trigger: ACACCATGGAGCACGGGGCCACGCGCAACTTCCAGG...AGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCTGTTGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | TGTTCTGATCTGTGGCAGGAAGGGACCGGCCAACAGGCTCCACACAACTCAAGGTGCTGCCACTGCTCCTaGGACATGCGGTGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CSDLWQEGTGQQAPHNSRCCHCS*DMRCCR Trigger: GCGGCAGCACCGCATGTCTCAGGAGCAGTGGCAGCA...CCTTGAGTTGTGTGGAGCCTGTTGGCCGGTCCCTTCCTGCCACAGATCAGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | GGCCAACAGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTGTGGTGCTGCCGCAGCATaGCCTCAAAGTCCACATGCG | + |
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Preference number: 4 (lower is better) Translates to: GQQAPHNSRTEGEGQAVCGAAAA*PQSPHA Trigger: CGCATGTGGACTTTGAGGCCATGCTGCGGCAGCACC...ACAGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCTGTTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | TGTTCTGATCTGTGGCAGGAAGGGACCGGCCAACAGGCTCCACACAACTCAAGGGACGTGCCAGGTGTCTaGGGTGTAGGGTTGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CSDLWQEGTGQQAPHNSRDVPGV*GVGLSA Trigger: GGCGGACAACCCTACACCCCAGACACCTGGCACGTC...CCTTGAGTTGTGTGGAGCCTGTTGGCCGGTCCCTTCCTGCCACAGATCAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCGACGTGCCAGGTGTCTaGGGTGTAGGGTTGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SLIPALVRRECGYIRLLLDVPGV*GVGLSA Trigger: GGCGGACAACCCTACACCCCAGACACCTGGCACGTC...GAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | GGACACTGCTTCTCCGTACACTGCCAGGCCATGGCAGAGATGGTCCCGAGGCCTGGTCCTTGGGTAGCTTaGGTTTCGGGATCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: GHCFSVHCQAMAEMVPRPGPWVA*VSGSSM Trigger: CATCGAAGATCCCGAAACTCAAGCTACCCAAGGACC...AGGCCTCGGGACCATCTCTGCCATGGCCTGGCAGTGTACGGAGAAGCAGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | CGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGACTGCACAGGGCCTCTaGCTTCCTCTTGGTCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: RLCCIRMEPQALCIVGRWTAQGL*LPLGLR Trigger: CCGCAGACCAAGAGGAAGGCAGAGGCCCTGTGCAGT...CCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS-3UTR CCA 90 bp | GTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGCTAGGCCATATGCACCCAGCTaGCTCAGGGAGGACGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VAFGWSPRPCVLLGDGARPYAPS*LREDVP Trigger: TGGCACGTCCTCCCTGAGCCAGCTGGGTGCATATGG...CCTAGCACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS-3UTR TCA 90 bp | AGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTGTCCTGGGGAGCAGCGCGTGCACTTaGTGTAGAATCGGAAGATTG | + |
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Preference number: 4 (lower is better) Translates to: RLHTTQGLKERARLSVLGSSACT*CRIGRL Trigger: CAATCTTCCGATTCTACATCAAGTGCACGCGCTGCT...CCCCAGGACAGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | TGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGCTAGGGAGATAGGGTCCAGACGCACCACATACTaGCGGTCCTTGGGTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WSPRPCVLLGDGAREIGSRRTTY*RSLGSL Trigger: CAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCT...GGACCCTATCTCCCTAGCACCATCTCCCAACAATACACAAGGCCTGGGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | ACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGGCCTCAAAGTCCACATaGGCCTGCCGCTGGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TVLHSDGAPGLVYCWEMVASKST*ACRWFR Trigger: CCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGC...CACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | GGCCAACAGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTGTGTAGAATCGGAAGATTaGCAGGCCCAGGTAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GQQAPHNSRTEGEGQAVCVESED*QAQVSL Trigger: GAGGCTTACCTGGGCCTGCCAATCTTCCGATTCTAC...ACAGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCTGTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGGGTGCTGCCGCAGCATaGCCTCAAAGTCCACATGCG | + |
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Preference number: 4 (lower is better) Translates to: TVLHSDGAPGLVYCWEMVGAAAA*PQSPHA Trigger: CGCATGTGGACTTTGAGGCCATGCTGCGGCAGCACC...CACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | AGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTACCTCCACACTCTTACACCTCATGTTaGAGGGGGCCATCAGACGCA | + |
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Preference number: 4 (lower is better) Translates to: STGEARVWLHTPASLPPHSYTSC*RGPSDA Trigger: TGCGTCTGATGGCCCCCTTCAACATGAGGTGTAAGA...GTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | CAGCACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAAGACGCACCACATACTaGCGGTCCTTGGGTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QHDCVAFGWSPRPCVLLGRRTTY*RSLGSL Trigger: CAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCT...TCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | CAGCACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAACATGCGCCTGCCGCTaGTTCAGGTCTTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHDCVAFGWSPRPCVLLGTCACR*FRSFSS Trigger: AGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGT...TCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CAA 72 bp | TGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATaGTTGGGAGATGGTGCTAGGGAGATAGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVAFGWSPRPCV*LGDGAREIGSL Trigger: CAGGGACCCTATCTCCCTAGCACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | CAGCACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGGTCCTTGGGTAGCTTaGGTTTCGGGATCTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QHDCVAFGWSPRPCVLLGGPWVA*VSGSSM Trigger: CATCGAAGATCCCGAAACTCAAGCTACCCAAGGACC...TCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | CAGCACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGATCTTACACCTCATGTTaGAGGGGGCCATCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHDCVAFGWSPRPCVLLGSYTSC*RGPSDA Trigger: TGCGTCTGATGGCCCCCTTCAACATGAGGTGTAAGA...TCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | AGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTACCTCCACACAGCAGCGCGTGCACTTaGTGTAGAATCGGAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: STGEARVWLHTPASLPPHSSACT*CRIGRL Trigger: CAATCTTCCGATTCTACATCAAGTGCACGCGCTGCT...GTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGACTGCTCCTGAGACATaGGGTGCTGCCGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYLHTVPGSLLSTEQIQTAPET*GAAAAW Trigger: CCATGCTGCGGCAGCACCGCATGTCTCAGGAGCAGT...CTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | TCTCTACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTGGCCCCGTGCTCCATaGTGTAGTCCGTGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPPHCAWLTSFYRTDSAWPRAP*CSPCSL Trigger: CAGAGAACACGGACTACACCATGGAGCACGGGGCCA...GGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGCTTCCATCTCCAGCTTaGAGTCCTTCGTCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLHSDGAPGLVYCWEMVLPSPA*SPSSGS Trigger: AGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAG...CACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCAAGTCCACATGCGCCTaGCGCTGGTTCAGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPPHCAWLTSFYRTDSAKSTCA*RWFRSF Trigger: GAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTT...GGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCGCCTTCCTCTTGGTCTaGGGTACCTCGTTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFSTSTLCLAHFFLQNRFAFLLV*GTSLRM Trigger: CATCCTCAACGAGGTACCGCAGACCAAGAGGAAGGC...GAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACATTGCTTTGGCCCCGTGCTCCATaGTGTAGTCCGTGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCAWLTSFYRTDSASTLLWPRAP*CSPCSL Trigger: CAGAGAACACGGACTACACCATGGAGCACGGGGCCA...AAGCAATGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | TCTGATCCCAGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTATCTCTAGGACCTTCATaGGGTTGTTCAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDPSTGEARVWLHTPASLSLGPS*GCSVPH Trigger: ATGAGGAACTGAACAACCCCATGAAGGTCCTAGAGA...TAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCTGGGATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | ACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACCTTCCATCTCCAGCTTaGAGTCCTTCGTCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTLCLAHFFLQNRFSLNLPSPA*SPSSGS Trigger: AGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAG...GTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR TCA 90 bp | CGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTTTCCTTTCGTGCATTaGACTTCTTCCCCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLCCIRMEPQALCIVGRWFPFVH*TSSPCR Trigger: TCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAA...CCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR GCA 90 bp | TCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACATTAAGTCCACATGCGCCTaGCGCTGGTTCAGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STLCLAHFFLQNRFSLNIKSTCA*RWFRSF Trigger: GAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTT...AATGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | TCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACATTGTAGAATCGGAAGATTaGCAGGCCCAGGTAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STLCLAHFFLQNRFSLNIVESED*QAQVSL Trigger: GAGGCTTACCTGGGCCTGCCAATCTTCCGATTCTAC...AATGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CCA 90 bp | ACATTGCTTCCTTACAGTATCAGAACACAGACTGATGTAATCCCAAATTCTGCAACATGCGCCTGCCGCTaGTTCAGGTCTTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLPYSIRTQTDVIPNSATCACR*FRSFSS Trigger: AGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGT...TGCAGAATTTGGGATTACATCAGTCTGTGTTCTGATACTGTAAGGAAGCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| 3UTR CAA 72 bp | TCTTTCTTCTTGTTTTGTTTAAACAGCACGACTGTGTaGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFFLFCLNSTTV*HSDGAPGLVYC Trigger: ACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTGCTGTTTAAACAAAACAAGAAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS TCA 90 bp | TACTGCACAGGGCCTCTGCCTTCCTCTTGGTCTGCGGTACCTCGTTaGGGATGGCTGTGGGGTTGGGTCTTGCAGCTGCCCGTGGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: YCTGPLPSSWSAVPR*GWLWGWVLQLPVVG Trigger: CCCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTACCGCAGACCAAGAGGAAGGCAGAGGCCCTGTGCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS-3UTR CAA 90 bp | GGCCAACAGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTGTGTCTGGGGTGTAGGGTaGTCCGCCTTCCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQQAPHNSRTEGEGQAVCVWGVG*SAFLLL Trigger: CAAGAGCAGGAAGGCGGACAACCCTACACCCCAGAC...ACAGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCTGTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS GCA 90 bp | GACATGCGGTGCTGCCGCAGCATGGCCTCAAAGTCCACATGCGCCTaGCGCTGGTTCAGGTCTTTCAGCTCTTGCAGGTTTTCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DMRCCRSMASKSTCA*RWFRSFSSCRFSST Trigger: AGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGCCATGCTGCGGCAGCACCGCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CCA 90 bp | CGGTGCTGCCGCAGCATGGCCTCAAAGTCCACATGCGCCTGCCGCTaGTTCAGGTCTTTCAGCTCTTGCAGGTTTTCCAGCACTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RCCRSMASKSTCACR*FRSFSSCRFSSTSI Trigger: GATGGAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGCCATGCTGCGGCAGCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CCGGCCAACAGGCTCCACACAACTCAAGGACTGAAGGAGAGGGCCAGGCTGTCTACTTCCATCTCCAGCTaGGAGTCCTTCGTCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PANRLHTTQGLKERARLSTSISS*ESFVRF Trigger: GAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGT...AGACAGCCTGGCCCTCTCCTTCAGTCCTTGAGTTGTGTGGAGCCTGTTGGCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGCTAGGGAGATAGGGTCCGTCTGGGGTGTAGGGTaGTCCGCCTTCCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSPRPCVLLGDGAREIGSVWGVG*SAFLLL Trigger: CAAGAGCAGGAAGGCGGACAACCCTACACCCCAGAC...GGACCCTATCTCCCTAGCACCATCTCCCAACAATACACAAGGCCTGGGGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CCCAAATTCTGCATGAAGGCCATGCTGAGAGGCCAGGCGCAGGGGTGTATGGCAGTCTTACACCTCATGTaGAAGGGGGCCATCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: PKFCMKAMLRGQAQGCMAVLHLM*KGAIRR Trigger: GCGTCTGATGGCCCCCTTCAACATGAGGTGTAAGAC...TGCCATACACCCCTGCGCCTGGCCTCTCAGCATGGCCTTCATGCAGAATTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | TGCTTGCTTGATCCCATCTCCTCCTCATTTCTTGGGTCTATGAGACCACGGTGGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLDPISSSFLGSMRPRWRMAVG*GLAAAR Trigger: ACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCT...CCACCGTGGTCTCATAGACCCAAGAAATGAGGAGGAGATGGGATCAAGCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATTCAGCCTCAACATTGCTTTCCGCCTTCCTGCTCTaGGGGGCACCTGCGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HCAWLTSFYRTDSASTLLSAFLL*GAPAAV Trigger: CACCGCCGCAGGTGCCCCCAAGAGCAGGAAGGCGGA...AAGCAATGTTGAGGCTGAATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS-3UTR CAA 90 bp | CCCAAATTCTGCATGAAGGCCATGCTGAGAGGCCAGGCGCAGGGGTGTATGGCAAGGACCTTCATGGGGTaGTTCAGTTCCTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKFCMKAMLRGQAQGCMARTFMG*FSSSSS Trigger: AGAGGATGAGGAACTGAACAACCCCATGAAGGTCCT...TGCCATACACCCCTGCGCCTGGCCTCTCAGCATGGCCTTCATGCAGAATTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS TCA 90 bp | AGGGGGCCATCAGACGCACCACATACTGCCGGTCCTTGGGTAGCTTaGGTTTCGGGATCTTCGATGGGTCAAAGTCAGGTGGGTAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGPSDAPHTAGPWVA*VSGSSMGQSQVGSI Trigger: AATACTACCCACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCTGATGGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGTAGAATCGGAAGATaGGCAGGCCCAGGTAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLCCIRMEPQALCIVGRWCRIGR*AGPGKP Trigger: AGGCTTACCTGGGCCTGCCAATCTTCCGATTCTACA...CCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | AGCACTGGTGAGGCGAGAGTGTGGCTACATACGCCTGCTTCTCTACCTCCACACAGGACCTTCATGGGGTaGTTCAGTTCCTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: STGEARVWLHTPASLPPHRTFMG*FSSSSS Trigger: AGAGGATGAGGAACTGAACAACCCCATGAAGGTCCT...GTGTGGAGGTAGAGAAGCAGGCGTATGTAGCCACACTCTCGCCTCACCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CACGACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATACTTCCATCTCCAGCTaGGAGTCCTTCGTCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HDCVAFGWSPRPCVLLGDTSISS*ESFVRF Trigger: GAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGT...ATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | TGTTCTGATCTGTGGCAGGAAGGGACCGGCCAACAGGCTCCACACAACTCAAGGCAGGTCTTTCAGCTCTaGCAGGTTTTCCAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSDLWQEGTGQQAPHNSRQVFQL*QVFQHF Trigger: GAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTG...CCTTGAGTTGTGTGGAGCCTGTTGGCCGGTCCCTTCCTGCCACAGATCAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTGCTAGGGAGATAGGGTCCCAGGTCTTTCAGCTCTaGCAGGTTTTCCAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSPRPCVLLGDGAREIGSQVFQL*QVFQHF Trigger: GAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTG...GGACCCTATCTCCCTAGCACCATCTCCCAACAATACACAAGGCCTGGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | GACTGTGTTGCATTCGGATGGAGCCCCAGGCCTTGTGTATTGTTGGGAGATGGTTGTAGAATCGGAAGATaGGCAGGCCCAGGTAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DCVAFGWSPRPCVLLGDGCRIGR*AGPGKP Trigger: AGGCTTACCTGGGCCTGCCAATCTTCCGATTCTACA...ACCATCTCCCAACAATACACAAGGCCTGGGGCTCCATCCGAATGCAACACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CCA 90 bp | GGTCTTTCAGCTCTTGCAGGTTTTCCAGCACTTCCATCTCCAGCTTaGAGTCCTTCGTCCGGTTCTCTAGGACCTTCATGGGGTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSALAGFPALPSPA*SPSSGSLGPSWGCS Trigger: TGAACAACCCCATGAAGGTCCTAGAGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTTCTCTACCTCCACACTGTGCCTGGCTCACTTCTTTCTACAGAACAGATGTCTTACACCTCATGTaGAAGGGGGCCATCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: PASLPPHCAWLTSFYRTDVLHLM*KGAIRR Trigger: GCGTCTGATGGCCCCCTTCAACATGAGGTGTAAGAC...ATCTGTTCTGTAGAAAGAAGTGAGCCAGGCACAGTGTGGAGGTAGAGAAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS-3UTR CAA 90 bp | GAACAGATTCAGCCTCAACATTGCTTCCTTACAGTATCAGAACACAGACTGATGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: EQIQPQHCFLTVSEHRLMRMAVG*GLAAAR Trigger: ACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCT...CATCAGTCTGTGTTCTGATACTGTAAGGAAGCAATGTTGAGGCTGAATCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS TCA 90 bp | GCAGGCCCAGGTAAGCCTCGTTCTGGACTGTTTCCTTTCGTGCATTaGACTTCTTCCCCTTGTAGATGTATTCTCCACACGTCTTACACC | + |
|
Preference number: 5 (lower is better) Translates to: AGPGKPRSGLFPFVH*TSSPCRCILHTSYT Trigger: GGTGTAAGACGTGTGGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAACGAGGCTTACCTGGGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS GCA 90 bp | GATTGGCAGGCCCAGGTAAGCCTCGTTCTGGACTGTTTCCTTTCGTaGATTGAACTTCTTCCCCTTGTAGATGTATTCTCCACACGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DWQAQVSLVLDCFLS*IELLPLVDVFSTRL Trigger: AAGACGTGTGGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAACGAGGCTTACCTGGGCCTGCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATTCAGCCTCAACATTGCTTCCTTACAGTATCAGAACACAGACTGATGTAACATACTGCCGGTCCTaGGGTAGCTTGAGTTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TDSASTLLPYSIRTQTDVTYCRS*GSLSFG Trigger: CCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGT...TACATCAGTCTGTGTTCTGATACTGTAAGGAAGCAATGTTGAGGCTGAATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
||
| CDS CAA 90 bp | CGCCTTCCTGCTCTTGGGGGCACCTCGTTGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGTGGTCGGGAAGGTGGCGCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPALGGTSLRMAVG*GLAAARGREGGASS Trigger: GGATGAGGCGCCACCTTCCCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTGCCCCCAAGAGCAGGAAGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233661.2 |
||
| CDS CAA 72 bp | GCTCTTGGGGGCACCTCGTTGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGTGGTCGGGAAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALGGTSLRMAVG*GLAAARGREGG Trigger: GCCACCTTCCCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTGCCCCCAAGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233661.2 |
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| CDS CAA 90 bp | GCCTTCCTCTTGGTCTGCGGTACCTCGTTGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGTGGTCGGGAAGGTGGCGCCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: AFLLVCGTSLRMAVG*GLAAARGREGGASS Trigger: GGATGAGGCGCCACCTTCCCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTACCGCAGACCAAGAGGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS TCA 72 bp | AGCTGCCCGTGGTCGGGAAGGTGGCGCCTCATCCTCTaGCTCAGAGTCCTCCAGAAGCCTTCGATGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SCPWSGRWRLIL*LRVLQKPSMAS Trigger: GCTCGCCATCGAAGGCTTCTGGAGGACTCTGAGTCAGAGGATGAGGCGCCACCTTCCCGACCACGGGCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 72 bp | TTGGTCTGCGGTACCTCGTTGAGGATGGCTGTGGGGTaGGGTCTTGCAGCTGCCCGTGGTCGGGAAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LVCGTSLRMAVG*GLAAARGREGG Trigger: GCCACCTTCCCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTACCGCAGACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS CAA 72 bp | AGGGTTGTCCGCCTTCCTGCTCTTGGGGGCACCTCGTaGAGGATGGCTGTGGGGTTGGGTCTTGCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RVVRLPALGGTS*RMAVGLGLAAA Trigger: GGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTGCCCCCAAGAGCAGGAAGGCGGACAACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233661.2 |
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| CDS CAA 90 bp | TTACTGCACAGGGCCTCTGCCTTCCTCTTGGTCTGCGGTACCTCGTaGAGGATGGCTGTGGGGTTGGGTCTTGCAGCTGCCCGTGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LLHRASAFLLVCGTS*RMAVGLGLAAARGR Trigger: CCGACCACGGGCAGCTGCAAGACCCAACCCCACAGCCATCCTCAACGAGGTACCGCAGACCAAGAGGAAGGCAGAGGCCCTGTGCAGTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS CCA 72 bp | CCTCCTCCAGAAGCTTCTCCGCCTGGAAGTTGCGCGTaGCCCCGTGCTCCATGGTGTAGTCCGTGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PPPEASPPGSCA*PRAPWCSPCSL Trigger: CAGAGAACACGGACTACACCATGGAGCACGGGGCCACGCGCAACTTCCAGGCGGAGAAGCTTCTGGAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS GCA 72 bp | ATGCGGTGCTGCCGCAGCATGGCCTCAAAGTCCACATaGGCCTGCCGCTGGTTCAGGTCTTTCAGCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: MRCCRSMASKST*ACRWFRSFSSC Trigger: GCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGCCATGCTGCGGCAGCACCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 90 bp | AAGCCTGCCAACTGTGCTTTACTGCACAGGGCCTCTGCCTTCCTCTaGGTCTGCGGTACCTCGTTGAGGATGGCTGTGGGGTTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KPANCALLHRASAFL*VCGTSLRMAVGLGL Trigger: AAGACCCAACCCCACAGCCATCCTCAACGAGGTACCGCAGACCAAGAGGAAGGCAGAGGCCCTGTGCAGTAAAGCACAGTTGGCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS GCA 72 bp | TGCTGCCGCAGCATGGCCTCAAAGTCCACATGCGCCTaGCGCTGGTTCAGGTCTTTCAGCTCTTGCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: CCRSMASKSTCA*RWFRSFSSCRF Trigger: AAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGCCATGCTGCGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CCA 72 bp | CGCAGCATGGCCTCAAAGTCCACATGCGCCTGCCGCTaGTTCAGGTCTTTCAGCTCTTGCAGGTTTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSMASKSTCACR*FRSFSSCRFSS Trigger: GCTGGAAAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAGGCCATGCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 90 bp | TCCAGCTTGGAGTCCTTCGTCCGGTTCTCTAGGACCTTCATGGGGTaGTTCAGTTCCTCATCCTCTCGCTCCTTCTGCACGCGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLESFVRFSRTFMG*FSSSSSRSFCTRFS Trigger: GGAGAAGCGCGTGCAGAAGGAGCGAGAGGATGAGGAACTGAACAACCCCATGAAGGTCCTAGAGAACCGGACGAAGGACTCCAAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 72 bp | AAGGGGGCCATCAGACGCACCACATACTGCCGGTCCTaGGGTAGCTTGAGTTTCGGGATCTTCGATGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: KGAIRRTTYCRS*GSLSFGIFDGS Trigger: TGACCCATCGAAGATCCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCTGATGGCCCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 72 bp | GAGTCCTTCGTCCGGTTCTCTAGGACCTTCATGGGGTaGTTCAGTTCCTCATCCTCTCGCTCCTTCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: ESFVRFSRTFMG*FSSSSSRSFCT Trigger: CGTGCAGAAGGAGCGAGAGGATGAGGAACTGAACAACCCCATGAAGGTCCTAGAGAACCGGACGAAGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 72 bp | CACATGCGCCTGCCGCTGGTTCAGGTCTTTCAGCTCTaGCAGGTTTTCCAGCACTTCCATCTCCAGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: HMRLPLVQVFQL*QVFQHFHLQLG Trigger: TCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 90 bp | CTCATGTTGAAGGGGGCCATCAGACGCACCACATACTGCCGGTCCTaGGGTAGCTTGAGTTTCGGGATCTTCGATGGGTCAAAGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LMLKGAIRRTTYCRS*GSLSFGIFDGSKSG Trigger: ACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCTGATGGCCCCCTTCAACATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 90 bp | CTCAAAGTCCACATGCGCCTGCCGCTGGTTCAGGTCTTTCAGCTCTaGCAGGTTTTCCAGCACTTCCATCTCCAGCTTGGAGTCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: LKVHMRLPLVQVFQL*QVFQHFHLQLGVLR Trigger: ACGAAGGACTCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCTGAACCAGCGGCAGGCGCATGTGGACTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS TCA 72 bp | TCAGACGCACCACATACTGCCGGTCCTTGGGTAGCTTaGGTTTCGGGATCTTCGATGGGTCAAAGTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SDAPHTAGPWVA*VSGSSMGQSQV Trigger: CACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CCA 72 bp | GCTCTTGCAGGTTTTCCAGCACTTCCATCTCCAGCTTaGAGTCCTTCGTCCGGTTCTCTAGGACCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: ALAGFPALPSPA*SPSSGSLGPSW Trigger: CCATGAAGGTCCTAGAGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS GCA 72 bp | TCTTTGGTACAACTAAGCCTGCCAACTGTGCTTTACTaGACAGGGCCTCTGCCTTCCTCTTGGTCTGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: SLVQLSLPTVLY*TGPLPSSWSAV Trigger: TACCGCAGACCAAGAGGAAGGCAGAGGCCCTGTGCAGTAAAGCACAGTTGGCAGGCTTAGTTGTACCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086869.6 |
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| CDS CAA 72 bp | ATCAGACGCACCACATACTGCCGGTCCTTGGGTAGCTaGAGTTTCGGGATCTTCGATGGGTCAAAGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IRRTTYCRSLGS*SFGIFDGSKSG Trigger: ACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGCTACCCAAGGACCGGCAGTATGTGGTGCGTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 72 bp | AGCTCTTGCAGGTTTTCCAGCACTTCCATCTCCAGCTaGGAGTCCTTCGTCCGGTTCTCTAGGACCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SSCRFSSTSISS*ESFVRFSRTFM Trigger: CATGAAGGTCCTAGAGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS CAA 90 bp | AGGTCTTTCAGCTCTTGCAGGTTTTCCAGCACTTCCATCTCCAGCTaGGAGTCCTTCGTCCGGTTCTCTAGGACCTTCATGGGGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RSFSSCRFSSTSISS*ESFVRFSRTFMGLF Trigger: GAACAACCCCATGAAGGTCCTAGAGAACCGGACGAAGGACTCCAAGCTGGAGATGGAAGTGCTGGAAAACCTGCAAGAGCTGAAAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS GCA 72 bp | GCCCAGGTAAGCCTCGTTCTGGACTGTTTCCTTTCGTaGATTGAACTTCTTCCCCTTGTAGATGTATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AQVSLVLDCFLS*IELLPLVDVFS Trigger: GGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAACGAGGCTTACCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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| CDS TCA 72 bp | GGTAAGCCTCGTTCTGGACTGTTTCCTTTCGTGCATTaGACTTCTTCCCCTTGTAGATGTATTCTCCACACG | + |
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Preference number: 6 (lower is better) Translates to: GKPRSGLFPFVH*TSSPCRCILHT Trigger: CGTGTGGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAACGAGGCTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086869.6 ENSMUST00000233661.2 |
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