Pregenerated sensors for YJEFN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048967Ensembl transcript IDs: ENSMUST00000152938.9, ENSMUST00000180068.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCGGGATGGAGAGTCGCTTCAGCGTGGCCAGCGCGCGCGCGCAGTaGCCGCCTGCTTCAGCCAGCCGCACTCCCGGCCCAAGCACTGCG | + |
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Preference number: 5 (lower is better) Translates to: SGMESRFSVASARAQ*PPASASRTPGPSTA Trigger: CGCAGTGCTTGGGCCGGGAGTGCGGCTGGCTGAAGCAGGCGGGCACTGCGCGCGCGCGCTGGCCACGCTGAAGCGACTCTCCATCCCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | CGCGCGGGGCAGAAGATGCTGGGCTGGTATTCGAACACCCGCAGGTaGCGGGCACACGCCAGCCCCACGGCGCCATTCTGCTCCGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RAGQKMLGWYSNTRR*RAHASPTAPFCSGP Trigger: CGGCCCGGAGCAGAATGGCGCCGTGGGGCTGGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 90 bp | CGGTGCAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATGCTGGGCTaGTATTCGAACACCCGCAGGTGCCGGGCACACGCCAGCCCCACG | + |
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Preference number: 5 (lower is better) Translates to: RCSASAERAGQKMLG*YSNTRRCRAHASPT Trigger: CGTGGGGCTGGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 90 bp | CCTCCGCATCCCAGCCTGAGGGGACGTCCAGGCTCACAAGCGGGATaGAGAGTCGCTTCAGCGTGGCCAGCGCGCGCGCGCAGTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PPHPSLRGRPGSQAG*RVASAWPARARSAR Trigger: GCGGGCACTGCGCGCGCGCGCTGGCCACGCTGAAGCGACTCTCCATCCCGCTTGTGAGCCTGGACGTCCCCTCAGGCTGGGATGCGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | GCAGTGCCCGCCTGCTTCAGCCAGCCGCACTCCCGGCCCAAGCACTaGGTCCACCACCAGCCCGTACGCGTCGTCGATGAGCCGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: AVPACFSQPHSRPKH*VHHQPVRVVDEPHL Trigger: GAGGTGCGGCTCATCGACGACGCGTACGGGCTGGTGGTGGACGCAGTGCTTGGGCCGGGAGTGCGGCTGGCTGAAGCAGGCGGGCACTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 90 bp | GGTCACGGTGCAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATGCTaGGCTGGTATTCGAACACCCGCAGGTGCCGGGCACACGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GHGAARRPNARGRRC*AGIRTPAGAGHTPA Trigger: GGCTGGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACCGTGACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 90 bp | AGGGGACGTCCAGGCTCACAAGCGGGATGGAGAGTCGCTTCAGCGTaGCCAGCGCGCGCGCGCAGTGCCCGCCTGCTTCAGCCAGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: RGRPGSQAGWRVASA*PARARSARLLQPAA Trigger: TGCGGCTGGCTGAAGCAGGCGGGCACTGCGCGCGCGCGCTGGCCACGCTGAAGCGACTCTCCATCCCGCTTGTGAGCCTGGACGTCCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | AACACCCGCAGGTGCCGGGCACACGCCAGCCCCACGGCGCCATTCTaGTCCGGGCCGCACACAACCAGCACTGTCCTCTGCTTCCGCGAC | + |
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Preference number: 5 (lower is better) Translates to: NTRRCRAHASPTAPF*SGPHTTSTVLCFRD Trigger: GTCGCGGAAGCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAATGGCGCCGTGGGGCTGGCGTGTGCCCGGCACCTGCGGGTGTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | CCGGCGCAGCTCTTGGGCGCTGCAAGGGACACCAGCACATCGGGCTaGACCGCGTCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PAQLLGAARDTSTSG*TASFASPPASASQP Trigger: AGGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | TCAGGTCACGGTGCAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATaGTGGGCTGGTATTCGAACACCCGCAGGTGCCGGGCACACGCCA | + |
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Preference number: 5 (lower is better) Translates to: SGHGAARRPNARGRR*WAGIRTPAGAGHTP Trigger: TGGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACCGTGACCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | ACGGCGCCATTCTGCTCCGGGCCGCACACAACCAGCACTGTCCTCTaGTTCCGCGACAGCGAGGGCAAGGGGAAGGCCTGGTGCACCGCG | + |
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Preference number: 5 (lower is better) Translates to: TAPFCSGPHTTSTVL*FRDSEGKGKAWCTA Trigger: CGCGGTGCACCAGGCCTTCCCCTTGCCCTCGCTGTCGCGGAAGCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAATGGCGCCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS GCA 90 bp | CCGGCGCAGCTCTTGGGCGCTGCAAGGGACACCAGCACATCGGGCTaGACCGCGTCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PAQLLGAARDTSTSG*TASFASPPASASQL Trigger: AAGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS CCA 90 bp | CGGCTACAAAGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTTaGGCGCTGCAAGGGACACCAGCACATCGGGCTGCACCGCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RLQSGDVRRSGRRSS*ALQGTPAHRAAPRP Trigger: AGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTTGTAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS TCA 90 bp | CTGCACCGCGTCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCCTaGGGGGACGTCCAGGCTCACAAGCGGGATGGAGAGTCGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LHRVLCVSASLRIPA*GDVQAHKRDGESLQ Trigger: CTGAAGCGACTCTCCATCCCGCTTGTGAGCCTGGACGTCCCCTCAGGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | ACGGCGCCATTCTGCTCCGGGCCGCACACAACCAGCACTGTCCTCTaGTTCCGCGACAGCGAGGGCAAGGGGAAGGCCTTGGTCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: TAPFCSGPHTTSTVL*FRDSEGKGKALVTA Trigger: GGCTGTGACCAAGGCCTTCCCCTTGCCCTCGCTGTCGCGGAAGCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAATGGCGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | AGGAAGGGGATGTCCATCTTCTCGCACTGCGTGGTCAGGTCACGGTaGAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATGCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RKGMSIFSHCVVRSR*SASAERAGQKMLGW Trigger: CCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACCGTGACCTGACCACGCAGTGCGAGAAGATGGACATCCCCTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | AAAGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTTGGGCGCTaGAAGGGACACCAGCACATCGGGCTGCACCGCGTCCTTTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: KVETSGEAAGAALGR*KGHQHIGLHRVLCV Trigger: GACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS TCA 90 bp | ACTCCTCCAGTAGCTCCCGTTCCAGAGCGGCCGCCTCCGAGGCGCTaGGAAAGCGCCTCTCCTCTGGCAACTGGACAGGGCCCGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TPPVAPVPERPPPRR*ESASPLATGQGPCC Trigger: ACAACACGGGCCCTGTCCAGTTGCCAGAGGAGAGGCGCTTTCTCAGCGCCTCGGAGGCGGCCGCTCTGGAACGGGAGCTACTGGAGGAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | GCAGGTGCAGGCCAAACTTTCGGCGGACGTCATCAGGCACGAACCTaGCGGCTACAAAGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: AGAGQTFGGRHQART*RLQSGDVRRSGRRS Trigger: GCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTTGTAGCCGGCAGGTTCGTGCCTGATGACGTCCGCCGAAAGTTTGGCCTGCACCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | GGGCGCTGCAAGGGACACCAGCACATCGGGCTGCACCGCGTCCTTTaGGTCTCCGCCAGCCTCCGCATCCCAGCTTTTGTTAGGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: GRCKGHQHIGLHRVL*VSASLRIPAFVRTV Trigger: GACAGTCCTAACAAAAGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS CCA 90 bp | AACTTTCGGCGGACGTCATCAGGCACGAACCTGCCGGCTACAAAGTaGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTTGGGCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: NFRRTSSGTNLPATK*RRPEKRPAQLLGAA Trigger: TGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTTGTAGCCGGCAGGTTCGTGCCTGATGACGTCCGCCGAAAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 90 bp | GTCACAGCCACCGCACTAGCGTGCCCACATAGTTCCACCAGCTGCTaGCTCCCAAAGCGGTACTCCTCCAGTAGCTCCCGTTCCAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: VTATALACPHSSTSC*LPKRYSSSSSRSRA Trigger: CGCTCTGGAACGGGAGCTACTGGAGGAGTACCGCTTTGGGAGGCAGCAGCTGGTGGAACTATGTGGGCACGCTAGTGCGGTGGCTGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 90 bp | TTGGTCACAGCCACCGCACTAGCGTGCCCACATAGTTCCACCAGCTaGTGCCTCCCAAAGCGGTACTCCTCCAGTAGCTCCCGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LVTATALACPHSSTS*CLPKRYSSSSSRSR Trigger: TCTGGAACGGGAGCTACTGGAGGAGTACCGCTTTGGGAGGCAGCAGCTGGTGGAACTATGTGGGCACGCTAGTGCGGTGGCTGTGACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | GAGAGTCGCTTCAGCGTGGCCAGCGCGCGCGCGCAGTaGCCGCCTGCTTCAGCCAGCCGCACTCCCGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ESRFSVASARAQ*PPASASRTPGP Trigger: TGGGCCGGGAGTGCGGCTGGCTGAAGCAGGCGGGCACTGCGCGCGCGCGCTGGCCACGCTGAAGCGACTCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 72 bp | CCCAGCCTGAGGGGACGTCCAGGCTCACAAGCGGGATaGAGAGTCGCTTCAGCGTGGCCAGCGCGCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSLRGRPGSQAG*RVASAWPARAR Trigger: GCGCGCGCGCGCTGGCCACGCTGAAGCGACTCTCCATCCCGCTTGTGAGCCTGGACGTCCCCTCAGGCTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | AGGTGCCGGGCACACGCCAGCCCCACGGCGCCATTCTaGTCCGGGCCGCACACAACCAGCACTGTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RCRAHASPTAPF*SGPHTTSTVLC Trigger: GCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAATGGCGCCGTGGGGCTGGCGTGTGCCCGGCACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 72 bp | GGTGCAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATaGTGGGCTGGTATTCGAACACCCGCAGGTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GAARRPNARGRR*WAGIRTPAGAG Trigger: CCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 72 bp | ACGTCCGGAGAAGCGGCCGGCGCAGCTCTTGGGCGCTaGAAGGGACACCAGCACATCGGGCTGCACCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: TSGEAAGAALGR*KGHQHIGLHRV Trigger: GACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 72 bp | GCGTCGGCCGAACGCGCGGGGCAGAAGATGCTGGGCTaGTATTCGAACACCCGCAGGTGCCGGGCACACGCC | + |
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Preference number: 6 (lower is better) Translates to: ASAERAGQKMLG*YSNTRRCRAHA Trigger: GGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 72 bp | GCAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATGCTaGGCTGGTATTCGAACACCCGCAGGTGCCGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AARRPNARGRRC*AGIRTPAGAGH Trigger: GTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CAA 90 bp | TGGGCGCTGCAAGGGACACCAGCACATCGGGCTGCACCGCGTCCTTaGCGTCTCCGCCAGCCTCCGCATCCCAGCCTGAGGGGACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WALQGTPAHRAAPRP*RLRQPPHPSLRGRP Trigger: TGGACGTCCCCTCAGGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS CAA 90 bp | CCGGCTACAAAGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTaGGGCGCTGCAAGGGACACCAGCACATCGGGCTGCACCGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PATKWRRPEKRPAQL*GAARDTSTSGCTAS Trigger: GGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTTGTAGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS TCA 72 bp | GTAGCTCCCGTTCCAGAGCGGCCGCCTCCGAGGCGCTaGGAAAGCGCCTCTCCTCTGGCAACTGGACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VAPVPERPPPRR*ESASPLATGQG Trigger: GCCCTGTCCAGTTGCCAGAGGAGAGGCGCTTTCTCAGCGCCTCGGAGGCGGCCGCTCTGGAACGGGAGCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | CTCTTGGGCGCTGCAAGGGACACCAGCACATCGGGCTaGACCGCGTCCTTTGCGTCTCCGCCAGCCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LLGAARDTSTSG*TASFASPPASA Trigger: TGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 72 bp | AGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTTaGGCGCTGCAAGGGACACCAGCACATCGGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGDVRRSGRRSS*ALQGTPAHRAA Trigger: TGCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CAA 72 bp | CAAGGGACACCAGCACATCGGGCTGCACCGCGTCCTTaGCGTCTCCGCCAGCCTCCGCATCCCAGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: QGTPAHRAAPRP*RLRQPPHPSLR Trigger: CCTCAGGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS CAA 72 bp | AAGTGGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTaGGGCGCTGCAAGGGACACCAGCACATCGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KWRRPEKRPAQL*GAARDTSTSGC Trigger: GCAGCCCGATGTGCTGGTGTCCCTTGCAGCGCCCAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS TCA 72 bp | GTCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCCTaGGGGGACGTCCAGGCTCACAAGCGGGATGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VLCVSASLRIPA*GDVQAHKRDGE Trigger: CTCTCCATCCCGCTTGTGAGCCTGGACGTCCCCTCAGGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | CAGAAGATGCTGGGCTGGTATTCGAACACCCGCAGGTaGCGGGCACACGCCAGCCCCACGGCGCCATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: QKMLGWYSNTRR*RAHASPTAPFC Trigger: GCAGAATGGCGCCGTGGGGCTGGCGTGTGCCCGGCACCTGCGGGTGTTCGAATACCAGCCCAGCATCTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 72 bp | TTCTGCTCCGGGCCGCACACAACCAGCACTGTCCTCTaGTTCCGCGACAGCGAGGGCAAGGGGAAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FCSGPHTTSTVL*FRDSEGKGKAW Trigger: CCAGGCCTTCCCCTTGCCCTCGCTGTCGCGGAAGCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS GCA 72 bp | TTCTGCTCCGGGCCGCACACAACCAGCACTGTCCTCTaGTTCCGCGACAGCGAGGGCAAGGGGAAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FCSGPHTTSTVL*FRDSEGKGKAL Trigger: CAAGGCCTTCCCCTTGCCCTCGCTGTCGCGGAAGCAGAGGACAGTGCTGGTTGTGTGCGGCCCGGAGCAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | ATGTCCATCTTCTCGCACTGCGTGGTCAGGTCACGGTaGAGCGCGTCGGCCGAACGCGCGGGGCAGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: MSIFSHCVVRSR*SASAERAGQKM Trigger: CATCTTCTGCCCCGCGCGTTCGGCCGACGCGCTGCACCGTGACCTGACCACGCAGTGCGAGAAGATGGACAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CCA 72 bp | CGGACGTCATCAGGCACGAACCTGCCGGCTACAAAGTaGAGACGTCCGGAGAAGCGGCCGGCGCAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RTSSGTNLPATK*RRPEKRPAQLL Trigger: CAAGAGCTGCGCCGGCCGCTTCTCCGGACGTCTCCACTTTGTAGCCGGCAGGTTCGTGCCTGATGACGTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 72 bp | GGCCAAACTTTCGGCGGACGTCATCAGGCACGAACCTaGCGGCTACAAAGTGGAGACGTCCGGAGAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GQTFGGRHQART*RLQSGDVRRSG Trigger: GCCGCTTCTCCGGACGTCTCCACTTTGTAGCCGGCAGGTTCGTGCCTGATGACGTCCGCCGAAAGTTTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS GCA 72 bp | AAGGGACACCAGCACATCGGGCTGCACCGCGTCCTTTaGGTCTCCGCCAGCCTCCGCATCCCAGCTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KGHQHIGLHRVL*VSASLRIPAFV Trigger: AACAAAAGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCAGCCCGATGTGCTGGTGTCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS CCA 72 bp | TCCGAGGCGCTGAGAAAGCGCCTCTCCTCTGGCAACTaGACAGGGCCCGTGTTGTTGTGCACACTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SEALRKRLSSGN*TGPVLLCTLLL Trigger: GAGCAGCAGTGTGCACAACAACACGGGCCCTGTCCAGTTGCCAGAGGAGAGGCGCTTTCTCAGCGCCTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS CAA 90 bp | TGCACCGCGTCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCTTTaGTTAGGACTGTCCAGGCTCACAAGCGGGATGGAGAGTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CTASFASPPASASQL*LGLSRLTSGMESRF Trigger: GAAGCGACTCTCCATCCCGCTTGTGAGCCTGGACAGTCCTAACAAAAGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGACGCGGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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| CDS GCA 72 bp | ACCGCACTAGCGTGCCCACATAGTTCCACCAGCTGCTaGCTCCCAAAGCGGTACTCCTCCAGTAGCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: TALACPHSSTSC*LPKRYSSSSSR Trigger: ACGGGAGCTACTGGAGGAGTACCGCTTTGGGAGGCAGCAGCTGGTGGAACTATGTGGGCACGCTAGTGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152938.9 |
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| CDS GCA 72 bp | GAGGCCACGCAGTCGGTGCCAGTATATTTTGGCAGGTaGAGGCCAAACTTTCGGCGGACGTCATCAGGCACG | + |
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Preference number: 6 (lower is better) Translates to: EATQSVPVYFGR*RPNFRRTSSGT Trigger: CGTGCCTGATGACGTCCGCCGAAAGTTTGGCCTGCACCTGCCAAAATATACTGGCACCGACTGCGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152938.9 ENSMUST00000180068.2 |
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| CDS CAA 72 bp | TCCTTTGCGTCTCCGCCAGCCTCCGCATCCCAGCTTTaGTTAGGACTGTCCAGGCTCACAAGCGGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SFASPPASASQL*LGLSRLTSGME Trigger: CTCCATCCCGCTTGTGAGCCTGGACAGTCCTAACAAAAGCTGGGATGCGGAGGCTGGCGGAGACGCAAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180068.2 |
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