Pregenerated sensors for YIPF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024487Ensembl transcript IDs: ENSMUST00000025364.6
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGCTTTATTGCTTACTTCTCAGGAAGACCCCAAACCAGGAAAATaGCGCTGCTTATATAGCCCGCAGTGTGACGTTTCAGCACCTGAT | + |
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Preference number: 1 (lower is better) Translates to: QALLLTSQEDPKPGK*RCLYSPQCDVSAPD Trigger: ATCAGGTGCTGAAACGTCACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAGAAGTAAGCAATAAAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR GCA 90 bp | ATGTCTATTTCTGTCACTTCCAGGCTACTGAGAAGCGGAATGAGCTaGACTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: MSISVTSRLLRSGMS*TAVVCWSNFKSPRS Trigger: GGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAGTGCAGCTCATTCCGCTTCTCAGTAGCCTGGAAGTGACAGAAATAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGAAGACCCCAAACCAGGAAAATGGCGCTGCTTATATAGCCCGCAGTGTGAACTTTAAGCTACGCTaGGTGCTCAACAATGACGGC | + |
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Preference number: 2 (lower is better) Translates to: LRKTPNQENGAAYIARSVNFKLR*VLNNDG Trigger: GCCGTCATTGTTGAGCACCCAGCGTAGCTTAAAGTT...CACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGAAACCCACAACACCAAGAATAAAGTAAGATCATCCACAACACCAAGATTGTCTCTGCCTGACTaGACACTAGATTACTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: QDETHNTKNKVRSSTTPRLSLPD*TLDYFY Trigger: GTAGAAGTAATCTAGTGTGCAGTCAGGCAGAGACAA...TCTTGGTGTTGTGGATGATCTTACTTTATTCTTGGTGTTGTGGGTTTCATCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTGCTATACATGGTTCATGTAGTCAAGGAAATTCTTTACATATCAGATGCTCCTTCTTAGCTGTGTaGGCACAAACACTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ESAIHGSCSQGNSLHIRCSFLAV*AQTLRA Trigger: AGCTCTGAGTGTTTGTGCTCACACAGCTAAGAAGGA...GCATCTGATATGTAAAGAATTTCCTTGACTACATGAACCATGTATAGCACTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR CAA 90 bp | ACGTGGCCAGTCCACATTGAGTTGACACATTTAATGTCTAAACAGTaGTTCATATTTCATCTCTGTAGTAAGGTAGATTGTGAACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: TWPVHIELTHLMSKQ*FIFHLCSKVDCELL Trigger: AAGCAGTTCACAATCTACCTTACTACAGAGATGAAATATGAACAACTGTTTAGACATTAAATGTGTCAACTCAATGTGGACTGGCCACGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CCA 90 bp | CTTATTATGTTCGTAACTTTTGCTGAGCATGGGGATAAGAAATTGTATGCCAGTAAAATTAGGTGTATCTaGGGAACTGGGAATCAATGG | + |
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Preference number: 2 (lower is better) Translates to: LIMFVTFAEHGDKKLYASKIRCI*GTGNQW Trigger: CCATTGATTCCCAGTTCCCCAGATACACCTAATTTT...ACTGGCATACAATTTCTTATCCCCATGCTCAGCAAAAGTTACGAACATAATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CCA 90 bp | ATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTCAGGTATTGTCTTTCACTGCAGTTGTTTGCTaGTCCAATTTTAAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: INGLTITKCEITSQVLSFTAVVC*SNFKSP Trigger: TGGACTCTTAAAATTGGACCAGCAAACAACTGCAGT...GAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR GCA 90 bp | ATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTCAGGTATTGTCTTTCTGGCACTCACAAATTTaGCTCAGTAAGAACTACATA | + |
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Preference number: 2 (lower is better) Translates to: INGLTITKCEITSQVLSFWHSQI*LSKNYI Trigger: TATGTAGTTCTTACTGAGGCAAATTTGTGAGTGCCA...GAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CCA 90 bp | ATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTCAGGTATTGTCTTTCAGATTATCAGCTTTGTaGTTGGTTTTCCACTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: INGLTITKCEITSQVLSFRLSAL*LVFHLV Trigger: TACCAAGTGGAAAACCAACCACAAAGCTGATAATCT...GAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR GCA 72 bp | ACTTCTCAGGAAGACCCCAAACCAGGAAAATGGCGCTaGTTATATAGCCCGCAGTGTGACGTTTCAGCACCT | + |
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Preference number: 3 (lower is better) Translates to: TSQEDPKPGKWR*LYSPQCDVSAP Trigger: AGGTGCTGAAACGTCACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR CCA 72 bp | TTGCTTACTTCTCAGGAAGACCCCAAACCAGGAAAATaGCGCTGCTTATATAGCCCGCAGTGTGACGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: LLTSQEDPKPGK*RCLYSPQCDVS Trigger: TGAAACGTCACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAGAAGTAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGAAGACCCCAAACCAGGAAAATGGCGCTGCTTATATAGCCCGCAGTGTGTTCAGTGCACTTAACTaGAGGACACAGCAACTATTT | + |
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Preference number: 3 (lower is better) Translates to: LRKTPNQENGAAYIARSVFSALN*RTQQLF Trigger: AAATAGTTGCTGTGTCCTCAAGTTAAGTGCACTGAA...CACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR GCA 72 bp | TCTGTCACTTCCAGGCTACTGAGAAGCGGAATGAGCTaGACTGCAGTTGTTTGCTGGTCCAATTTTAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SVTSRLLRSGMS*TAVVCWSNFKS Trigger: ACTCTTAAAATTGGACCAGCAAACAACTGCAGTGCAGCTCATTCCGCTTCTCAGTAGCCTGGAAGTGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCACCAATCACTCAGTCTCACATAAACAAACCAGAGATGGGGGAAGGTACCCAGTCCACATTGAGTaGACACATTTAATGTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: SSTNHSVSHKQTRDGGRYPVHIE*THLMSK Trigger: TTTAGACATTAAATGTGTCAACTCAATGTGGACTGG...GTACCTTCCCCCATCTCTGGTTTGTTTATGTGAGACTGAGTGATTGGTGCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR TCA 72 bp | TGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATaGATTCGGCCCACTGATATCATGTCCCAGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: CWSNFKSPRSFL*IRPTDIMSQTK Trigger: TTTTGTCTGGGACATGATATCAGTGGGCCGAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTGCTATACATGGTTCATGTAGTCAAGGAAATTCTTTACATATCAGATGCAAACACCTTCTAACTTaGTCTCTGCCTGACTGCACA | + |
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Preference number: 3 (lower is better) Translates to: ESAIHGSCSQGNSLHIRCKHLLT*SLPDCT Trigger: TGTGCAGTCAGGCAGAGACAAAGTTAGAAGGTGTTT...GCATCTGATATGTAAAGAATTTCCTTGACTACATGAACCATGTATAGCACTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR TCA 72 bp | GGAACTGGGAATCAATGGGTTAACTATAACCAAGTGTaGGATAACTTCTCAGGTATTGTCTTTCCTATTCAC | + |
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Preference number: 3 (lower is better) Translates to: GTGNQWVNYNQV*DNFSGIVFPIH Trigger: GTGAATAGGAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGATTCCCAGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR CCA 72 bp | GGGGAAGCAATGAGTAAGAATAAAATTAGGTGTATCTaGGGAACTGGGAATCAATGGGTTAACTATAACCAA | + |
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Preference number: 3 (lower is better) Translates to: GEAMSKNKIRCI*GTGNQWVNYNQ Trigger: TTGGTTATAGTTAACCCATTGATTCCCAGTTCCCCAGATACACCTAATTTTATTCTTACTCATTGCTTCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTGCTATACATGGTTCATGTAGTCAAGGAAATTCTTTACATATCAGATGCTTATCAGCTTTGTGGTaGGTTTTCCACTTGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: ESAIHGSCSQGNSLHIRCLSALW*VFHLVK Trigger: TTTTACCAAGTGGAAAACCAACCACAAAGCTGATAA...GCATCTGATATGTAAAGAATTTCCTTGACTACATGAACCATGTATAGCACTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATGAATTCAAGGCAGAACACCACTaGCCCTGCCAAGTCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LQLFAGPILRVQGPFYEFKAEHH*PCQVRL Trigger: GAGACGGACTTGGCAGGGCCAGTGGTGTTCTGCCTT...GAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR GCA 90 bp | TCTGGGGAACTGGGAATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTGAACACCACTGGCCCTaGCAAGTCCGTCTCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: SGELGINGLTITKCEITSEHHWP*QVRLIH Trigger: ATGAATGAGACGGACTTGGCAGGGCCAGTGGTGTTC...AGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGATTCCCAGTTCCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATGAATTCCAGCCAGTAACAGTGTaGCCCCAAAGGCAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LQLFAGPILRVQGPFYEFQPVTV*PQRQGR Trigger: TCTGCCTTGCCTTTGGGGCCACACTGTTACTGGCTG...GAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | TCTGGGGAACTGGGAATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTAGTGTATGTCTGCTGTaGCTGCATCATGTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGELGINGLTITKCEITSSVCLL*LHHVWR Trigger: CCTCCAGACATGATGCAGCCACAGCAGACATACACT...AGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGATTCCCAGTTCCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | TCTGGGGAACTGGGAATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTAGGATAGGCCTGAGTTaGCTGGTAAATCTGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGELGINGLTITKCEITSRIGLS*LVNLPS Trigger: ACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCT...AGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGATTCCCAGTTCCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | CTTATTATGTTCGTAACTTTTGCTGAGCATGGGGATAAGAAATTGTATGCCAGTTGGCTGAGGTGTTGTTaGAGGATAGGCCTGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LIMFVTFAEHGDKKLYASWLRCC*RIGLSW Trigger: CCAACTCAGGCCTATCCTCCAACAACACCTCAGCCA...ACTGGCATACAATTTCTTATCCCCATGCTCAGCAAAAGTTACGAACATAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATGAATTCGCTGTCTCCATAGAATaGCTGAGGTGTTGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQLFAGPILRVQGPFYEFAVSIE*LRCCWR Trigger: CCTCCAACAACACCTCAGCCATTCTATGGAGACAGC...GAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR GCA 90 bp | CTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATGAATTCAGCCAAACTGGATTTTaGCAGCCAGTAACAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LQLFAGPILRVQGPFYEFSQTGF*QPVTVW Trigger: CCACACTGTTACTGGCTGGCAAAATCCAGTTTGGCT...GAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | ATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTCAGGTATTGTCTTTCTGGCTGCATCATGTCTaGAGGGACAAATCGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: INGLTITKCEITSQVLSFWLHHV*RDKSAL Trigger: CAAGGCCGATTTGTCCCTCCAGACATGATGCAGCCA...GAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR GCA 90 bp | ATCAATGGGTTAACTATAACCAAGTGTGAGATAACTTCTCAGGTATTGTCTTTCTATGTCTGCTGTGGCTaGATCATGTCTGGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: INGLTITKCEITSQVLSFYVCCG*IMSGGT Trigger: TGTCCCTCCAGACATGATGCAGCCACAGCAGACATA...GAAAGACAATACCTGAGAAGTTATCTCACACTTGGTTATAGTTAACCCATTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR GCA 90 bp | GTATTGTCTTTCCTATTCACTATAAATAGCAGTGCATTAAAAGATGGCACTCACTGCCCAGTGTATGTCTaGTGTGGCTGCATCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLSFLFTINSSALKDGTHCPVYV*CGCIMS Trigger: AGACATGATGCAGCCACAGCAGACATACACTGGGCA...GTGAGTGCCATCTTTTAATGCACTGCTATTTATAGTGAATAGGAAAGACAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTGTTTGCTGGTCCAATTTTAAGAGTCCAAGGTCCTTTTTATGAATTCTGGACAACAGGATCATaGGAAGAAGACAATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LQLFAGPILRVQGPFYEFWTTGS*EEDNSP Trigger: TGGGCTATTGTCTTCTTCCCATGATCCTGTTGTCCA...GAATTCATAAAAAGGACCTTGGACTCTTAAAATTGGACCAGCAAACAACTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR TCA 90 bp | GTATTGTCTTTCCTATTCACTATAAATAGCAGTGCATTAAAAGATGGCACTCACTGCCACACAGCCAAATaGCACACCTGTCATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: VLSFLFTINSSALKDGTHCHTAK*HTCHTH Trigger: ATGAGTATGACAGGTGTGTCATTTGGCTGTGTGGCA...GTGAGTGCCATCTTTTAATGCACTGCTATTTATAGTGAATAGGAAAGACAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| 3UTR CAA 72 bp | AGTAATACTGTCATTCAAAGTAAACACCTTCTAACTTaGTCTCTGCCTGACTGCACACTAGATTACTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: SNTVIQSKHLLT*SLPDCTLDYFY Trigger: GTAGAAGTAATCTAGTGTGCAGTCAGGCAGAGACAAAGTTAGAAGGTGTTTACTTTGAATGACAGTATTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | TCCCGTATACGTAGCCAAACTGGATTTTGCCAGCCAGTAACAGTGTaGCCCCAAAGGCAAGGCAGAACACCACTGGCCCTGCCAAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SRIRSQTGFCQPVTV*PQRQGRTPLALPSP Trigger: CGGACTTGGCAGGGCCAGTGGTGTTCTGCCTTGCCTTTGGGGCCACACTGTTACTGGCTGGCAAAATCCAGTTTGGCTACGTATACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | CTGGTAAATCTGCCCAGTGTATGTCTGCTGTGGCTGCATCATGTCTaGAGGGACAAATCGGCCTTGCTGCGAGTAGTCACAGCCAGCATA | + |
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Preference number: 5 (lower is better) Translates to: LVNLPSVCLLWLHHV*RDKSALLRVVTASI Trigger: TATGCTGGCTGTGACTACTCGCAGCAAGGCCGATTTGTCCCTCCAGACATGATGCAGCCACAGCAGACATACACTGGGCAGATTTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | ATAGGCCTGAGTTGGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTaGCTGCATCATGTCTGGAGGGACAAATCGGCCTTGCTGCGAGTA | + |
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Preference number: 5 (lower is better) Translates to: IGLSWLVNLPSVCLL*LHHVWRDKSALLRV Trigger: TACTCGCAGCAAGGCCGATTTGTCCCTCCAGACATGATGCAGCCACAGCAGACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | GGGCTCCTCCTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTTGTTaGAGGATAGGCCTGAGTTGGCTGGTAAATCTGCCCAGTGTATGT | + |
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Preference number: 5 (lower is better) Translates to: GLLLKAVSIEWLRCC*RIGLSWLVNLPSVC Trigger: ACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGGAGGAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | GTCTCCATAGAATGGCTGAGGTGTTGTTGGAGGATAGGCCTGAGTTaGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTGGCTGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: VSIEWLRCCWRIGLS*LVNLPSVCLLWLHH Trigger: ATGATGCAGCCACAGCAGACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | CTCAGGAAGACCCCAAACCAGGAAAATGGCGCTGCTTATATAGCCCGCAGTGTGATAGGACTGCTGAGATaGCTCGTCGATGCTGTAACT | + |
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Preference number: 5 (lower is better) Translates to: LRKTPNQENGAAYIARSVIGLLR*LVDAVT Trigger: AGTTACAGCATCGACGAGCAATCTCAGCAGTCCTAT...CACACTGCGGGCTATATAAGCAGCGCCATTTTCCTGGTTTGGGGTCTTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCACCAATCACTCAGTCTCACATAAACAAACCAGAGATGGGGGAAGGTACGAGGATAGGCCTGAGTaGGCTGGTAAATCTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SSTNHSVSHKQTRDGGRYEDRPE*AGKSAQ Trigger: CTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTC...GTACCTTCCCCCATCTCTGGTTTGTTTATGTGAGACTGAGTGATTGGTGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS GCA 90 bp | CTCCACTTCCTCCATAGTCATAGGACTGCTGAGATTGCTCGTCGATaGTGTAACTCGTCTGGTAGAAACCGCTGTTTAAGTTATCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LHFLHSHRTAEIARR*CNSSGRNRCLSYQS Trigger: GCTTTGATAACTTAAACAGCGGTTTCTACCAGACGAGTTACAGCATCGACGAGCAATCTCAGCAGTCCTATGACTATGGAGGAAGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | AGGAGTCCACACACAGCATATGTAACATGTTCCTACAGATTGTGTCTCCAGAATATGGCTGAGGTGTTGTaGGAGGATAGGCCTGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: RSPHTAYVTCSYRLCLQNMAEVL*EDRPEL Trigger: CAACTCAGGCCTATCCTCCAACAACACCTCAGCCAT...ATTCTGGAGACACAATCTGTAGGAACATGTTACATATGCTGTGTGTGGACTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | AGGAGTCCACACACAGCATATGTAACATGTTCCTACAGATTGTGTCTCCAGAATAGAATGGCTGAGGTGTaGTTGGAGGATAGGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RSPHTAYVTCSYRLCLQNRMAEV*LEDRPE Trigger: CTCAGGCCTATCCTCCAACAACACCTCAGCCATTCT...ATTCTGGAGACACAATCTGTAGGAACATGTTACATATGCTGTGTGTGGACTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | GAAAGTGCTATACATGGTTCATGTAGTCAAGGAAATTCTTTACATATCAGATGCAGGGACAAATCGGCCTaGCTGCGAGTAGTCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: ESAIHGSCSQGNSLHIRCRDKSA*LRVVTA Trigger: GGCTGTGACTACTCGCAGCAAGGCCGATTTGTCCCT...GCATCTGATATGTAAAGAATTTCCTTGACTACATGAACCATGTATAGCACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 90 bp | GAAGAATTCCTACCATTCCTTGTAAAGAAAATACCACTGCAAAGCTaGACAACAGGATCATGGGAAGAAGACAATAGCCCAGGACACTTG | + |
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Preference number: 5 (lower is better) Translates to: EEFLPFLVKKIPLQS*TTGSWEEDNSPGHL Trigger: CAAGTGTCCTGGGCTATTGTCTTCTTCCCATGATCCTGTTGTCCAGCTTTGCAGTGGTATTTTCTTTACAAGGAATGGTAGGAATTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | CTTATTATGTTCGTAACTTTTGCTGAGCATGGGGATAAGAAATTGTATGCCAGTAATAGCCCAGGACACTaGCCACACAGCCAAATGACA | + |
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Preference number: 5 (lower is better) Translates to: LIMFVTFAEHGDKKLYASNSPGH*PHSQMT Trigger: TGTCATTTGGCTGTGTGGCAAGTGTCCTGGGCTATT...ACTGGCATACAATTTCTTATCCCCATGCTCAGCAAAAGTTACGAACATAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS-3UTR CAA 90 bp | GTATTGTCTTTCCTATTCACTATAAATAGCAGTGCATTAAAAGATGGCACTCACCAAATGTGGTCAAAATaGATACCCAACTCTTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: VLSFLFTINSSALKDGTHQMWSK*IPNSSN Trigger: GTTAGAAGAGTTGGGTATCAATTTTGACCACATTTG...GTGAGTGCCATCTTTTAATGCACTGCTATTTATAGTGAATAGGAAAGACAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS TCA 72 bp | AGAACACCACTGGCCCTGCCAAGTCCGTCTCATTCATaGTGCTGCCGTCAGCTGCCCTCAGGGGGTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RTPLALPSPSHS*CCRQLPSGGVA Trigger: TGCTACACCCCCTGAGGGCAGCTGACGGCAGCATCATGAATGAGACGGACTTGGCAGGGCCAGTGGTGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS GCA 72 bp | TGTGGCCCCAAAGGCAAGGCAGAACACCACTGGCCCTaGCAAGTCCGTCTCATTCATGATGCTGCCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CGPKGKAEHHWP*QVRLIHDAAVS Trigger: GCTGACGGCAGCATCATGAATGAGACGGACTTGGCAGGGCCAGTGGTGTTCTGCCTTGCCTTTGGGGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 72 bp | CGTAGCCAAACTGGATTTTGCCAGCCAGTAACAGTGTaGCCCCAAAGGCAAGGCAGAACACCACTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSQTGFCQPVTV*PQRQGRTPLAL Trigger: CAGGGCCAGTGGTGTTCTGCCTTGCCTTTGGGGCCACACTGTTACTGGCTGGCAAAATCCAGTTTGGCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 72 bp | CAGAGGGGGCTCCTCCTCAAAGCTGTCTCCATAGAATaGCTGAGGTGTTGTTGGAGGATAGGCCTGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: QRGLLLKAVSIE*LRCCWRIGLSW Trigger: CCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGGAGGAGCCCCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 72 bp | CTGTGGCTGCATCATGTCTGGAGGGACAAATCGGCCTaGCTGCGAGTAGTCACAGCCAGCATACTGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LWLHHVWRDKSA*LRVVTASILLA Trigger: AGCAAGCAGTATGCTGGCTGTGACTACTCGCAGCAAGGCCGATTTGTCCCTCCAGACATGATGCAGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 90 bp | GAGGGGGCTCCTCCTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTaGTTGGAGGATAGGCCTGAGTTGGCTGGTAAATCTGCCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EGAPPQSCLHRMAEV*LEDRPELAGKSAQC Trigger: ACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGGAGGAGCCCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 90 bp | GGGGCTCCTCCTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTTGTaGGAGGATAGGCCTGAGTTGGCTGGTAAATCTGCCCAGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: GAPPQSCLHRMAEVL*EDRPELAGKSAQCM Trigger: CATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGGAGGAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 72 bp | AGTTGGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTaGCTGCATCATGTCTGGAGGGACAAATCGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SWLVNLPSVCLL*LHHVWRDKSAL Trigger: CAAGGCCGATTTGTCCCTCCAGACATGATGCAGCCACAGCAGACATACACTGGGCAGATTTACCAGCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 72 bp | GAATGGCTGAGGTGTTGTTGGAGGATAGGCCTGAGTTaGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: EWLRCCWRIGLS*LVNLPSVCLLW Trigger: CCACAGCAGACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 90 bp | TGTCTCCATAGAATGGCTGAGGTGTTGTTGGAGGATAGGCCTGAGTaGGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTGGCTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: CLHRMAEVLLEDRPE*AGKSAQCMSAVAAS Trigger: TGATGCAGCCACAGCAGACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CCA 72 bp | CTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTTGTTaGAGGATAGGCCTGAGTTGGCTGGTAAATCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LKAVSIEWLRCC*RIGLSWLVNLP Trigger: GGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 72 bp | AGAATGGCTGAGGTGTTGTTGGAGGATAGGCCTGAGTaGGCTGGTAAATCTGCCCAGTGTATGTCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMAEVLLEDRPE*AGKSAQCMSAV Trigger: CACAGCAGACATACACTGGGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 72 bp | CCTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTTGTaGGAGGATAGGCCTGAGTTGGCTGGTAAATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PQSCLHRMAEVL*EDRPELAGKSA Trigger: GGCAGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 72 bp | TCCTCCACTTCCTCCATAGTCATAGGACTGCTGAGATaGCTCGTCGATGCTGTAACTCGTCTGGTAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SSTSSIVIGLLR*LVDAVTRLVET Trigger: GGTTTCTACCAGACGAGTTACAGCATCGACGAGCAATCTCAGCAGTCCTATGACTATGGAGGAAGTGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS CAA 72 bp | CCTCCTCAAAGCTGTCTCCATAGAATGGCTGAGGTGTaGTTGGAGGATAGGCCTGAGTTGGCTGGTAAATCT | + |
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Preference number: 6 (lower is better) Translates to: PPQSCLHRMAEV*LEDRPELAGKS Trigger: AGATTTACCAGCCAACTCAGGCCTATCCTCCAACAACACCTCAGCCATTCTATGGAGACAGCTTTGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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| CDS GCA 72 bp | CTCCATAGTCATAGGACTGCTGAGATTGCTCGTCGATaGTGTAACTCGTCTGGTAGAAACCGCTGTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LHSHRTAEIARR*CNSSGRNRCLS Trigger: ACTTAAACAGCGGTTTCTACCAGACGAGTTACAGCATCGACGAGCAATCTCAGCAGTCCTATGACTATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025364.6 |
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