Pregenerated sensors for YIPF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071074Ensembl transcript IDs: ENSMUST00000095263.10, ENSMUST00000123311.8, ENSMUST00000127378.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACCTGGGCACACACATCCTCAGTACTGTCCTTTAATCTTCCTCTaGCCCGGAGCTGGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RPGHTHPQYCPLIFL*PGAGGQGRPRISER Trigger: CCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGGACAGTACTGAGGATGTGTGTGCCCAGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| 3UTR CCA 90 bp | CACACATCCTCAGTACTGTCCTTTAATCTTCCTCTGCCCCGGAGCTaGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: HTSSVLSFNLPLPRS*GSGQAEDFREGQCD Trigger: GTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGGACAGTACTGAGGATGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| 3UTR TCA 90 bp | ACTGGGTTGGCCTTGAAGATCCATGTTCCTGTGCACCTGCTGCGATaGAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: TGLALKIHVPVHLLR*KAMYTWPGFPSVEV Trigger: AACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGGTGCACAGGAACATGGATCTTCAAGGCCAACCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR GCA 90 bp | GCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGGTTAAAGGGTaGTGGTCACTAACACTTAGACCATGCTTAGCTTCAAATGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: AMYTWPGFPSVEVKG*WSLTLRPCLASNVS Trigger: GCTGACATTTGAAGCTAAGCATGGTCTAAGTGTTAGTGACCAGCACCCTTTAACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACGCAGCCACAGCCTGGTaGCTGCAGACCTGGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SAGTLRSLEELELKATVNAATAW*LQTWAH Trigger: GTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGC...GTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGGGGCATCAGAACGGGTaGCAGGAGGATGGCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VSAGTLRSLEELELKATVGHQNG*QEDGCQ Trigger: TTGGCAGCCATCCTCCTGCCACCCGTTCTGATGCCC...CACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR GCA 90 bp | ACACATCCTCAGTACTGTCCTTTAATCTTCCTCTGCCCCGGAGCTGGGGGTCAGCCTTTAATCTTCCTCTaGCCCGGAGCTGGGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: THPQYCPLIFLCPGAGGQPLIFL*PGAGGQ Trigger: CTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGG...CTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGGACAGTACTGAGGATGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGGTCCACAGCCTGGTGGCTaGAGACCTGGGCACACACAT | + |
|
Preference number: 2 (lower is better) Translates to: PAAMKSNVHLAWISFRGGPQPGG*RPGHTH Trigger: ATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGG...ACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCAGAGGGTCAATGTGACTaGAGAGTCACTGCTATTGCC | + |
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Preference number: 2 (lower is better) Translates to: VLCPSEAKPGAQQVFRQPEGQCD*RVTAIA Trigger: GGCAATAGCAGTGACTCTGCAGTCACATTGACCCTC...TGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| 3UTR CAA 90 bp | GTTAATGCTTGTGCCTGTGCAGTGAGTGCAGGCACCCTGAGGTCCTaGGAGGAGCTGGAGCTAAAAGCAACTGTGAACCATCCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: VNACACAVSAGTLRS*EELELKATVNHPAW Trigger: CCATGCTGGATGGTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCACTCACTGCACAGGCACAAGCATTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGACAGCCAGCCTAGCATTATACATGAGGACTGTGGGCTGCCTACCCACTCCTTTAATCTTCCTCTaGCCCGGAGCTGGGGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRTASLALYMRTVGCLPTPLIFL*PGAGGQ Trigger: CTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGG...AGTGGGTAGGCAGCCCACAGTCCTCATGTATAATGCTAGGCTGGCTGTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACCAGAGTTCCTGGTCTTGTaGCCTTCAGAAGCCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: CRHPEVLGGAGAKSNCEPEFLVL*PSEAKP Trigger: AGGCTTGGCTTCTGAAGGGCACAAGACCAGGAACTC...TGGTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAACCATCCAGCATGGGTGCTGGGAACTGGTCTAGTCCCCTCAAAGAACCCCATATTCTGCACTTaGCTGCAGAGACTTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: TVNHPAWVLGTGLVPSKNPIFCT*LQRLAV Trigger: GACTGCAAGTCTCTGCAGCCAAGTGCAGAATATGGG...GTTCTTTGAGGGGACTAGACCAGTTCCCAGCACCCATGCTGGATGGTTCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CAA 90 bp | AGTCCCCTCAAAGAACTGTATGGCCCTAAGTGGTTTGGAACTCTGTaGACTGGGTTGGCCTTGAAGATCCATGTTCCTGTGCACCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SPLKELYGPKWFGTL*TGLALKIHVPVHLL Trigger: CAGCAGGTGCACAGGAACATGGATCTTCAAGGCCAACCCAGTCAACAGAGTTCCAAACCACTTAGGGCCATACAGTTCTTTGAGGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACCAATGTTCCTGTGCACCTaGTGCGATGAAAAGCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: CRHPEVLGGAGAKSNCEPMFLCT*CDEKQC Trigger: ACATTGCTTTTCATCGCAGCAGGTGCACAGGAACAT...TGGTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGGTTTGTCATTGTTGCCCTaGCCTCTCAAAAGGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PAAMKSNVHLAWISFRGGLSLLP*PLKRTA Trigger: GGCTGTCCTTTTGAGAGGCCAGGGCAACAATGACAA...ACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGAACCATCCAGCATGGGTGCTGGGAACTGGTCTAGTCCCCTCAAAGAACAATGTACACTTGGCCTaGATTTCCTTCCGTGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TVNHPAWVLGTGLVPSKNNVHLA*ISFRGG Trigger: ACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATT...GTTCTTTGAGGGGACTAGACCAGTTCCCAGCACCCATGCTGGATGGTTCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR GCA 72 bp | GCCCAGCAGGTGTTTAGGCAGCCACAGCCTGGTGGCTaGAGACCTGGGCACACACATCCTCAGTACTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: AQQVFRQPQPGG*RPGHTHPQYCP Trigger: AGGACAGTACTGAGGATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGCCTAAACACCTGCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| 3UTR TCA 72 bp | GTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTaGCTGCAGAGTCACTGCTATTGCCTTGGCGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: VRAGRGFQRGSM*LQSHCYCLGGS Trigger: GCTACCGCCAAGGCAATAGCAGTGACTCTGCAGTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| 3UTR GCA 72 bp | ACAGCCAGCCTAGCATTATACATGAGGACTGTGGGCTaGCTACCCACTGCTCTGTGGGGCAGTAATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TASLALYMRTVG*LPTALWGSNGH Trigger: ATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCAGCCCACAGTCCTCATGTATAATGCTAGGCTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR GCA 72 bp | GGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACTaGAGAGTCACTGCTATTGCCTTGGCGGTAGCATTG | + |
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Preference number: 3 (lower is better) Translates to: GQAEDFREGQCD*RVTAIALAVAL Trigger: CAATGCTACCGCCAAGGCAATAGCAGTGACTCTGCAGTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| 3UTR-3UTR CAA 90 bp | AATGCTTGTGCCTGTGCAGTGAGTGCAGGCACCCTGAGGTCCTTGGAGGAGCTGACTCTGTTGACTGGGTaGGCCTTGAAGATCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: NACACAVSAGTLRSLEELTLLTG*ALKIHV Trigger: AACATGGATCTTCAAGGCCAACCCAGTCAACAGAGT...CAGCTCCTCCAAGGACCTCAGGGTGCCTGCACTCACTGCACAGGCACAAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGGTACCCATATTCTGCACTaGGCTGCAGAGACTTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PAAMKSNVHLAWISFRGGTHILH*AAETCS Trigger: ACTGCAAGTCTCTGCAGCCAAGTGCAGAATATGGGT...ACCTCCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR TCA 72 bp | GCCTTGAAGATCCATGTTCCTGTGCACCTGCTGCGATaGAAAGCAATGTACACTTGGCCTGGATTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: ALKIHVPVHLLR*KAMYTWPGFPS Trigger: GGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGGTGCACAGGAACATGGATCTTCAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR GCA 72 bp | ACTTGGCCTGGATTTCCTTCCGTGGAGGTTAAAGGGTaGTGGTCACTAACACTTAGACCATGCTTAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TWPGFPSVEVKG*WSLTLRPCLAS Trigger: TGAAGCTAAGCATGGTCTAAGTGTTAGTGACCAGCACCCTTTAACCTCCACGGAAGGAAATCCAGGCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CCA 72 bp | TGGCCTGGATTTCCTTCCGTGGAGGTTAAAGGGTGCTaGTCACTAACACTTAGACCATGCTTAGCTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: WPGFPSVEVKGC*SLTLRPCLASN Trigger: ATTTGAAGCTAAGCATGGTCTAAGTGTTAGTGACCAGCACCCTTTAACCTCCACGGAAGGAAATCCAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR TCA 72 bp | CTAACACTTAGACCATGCTTAGCTTCAAATGTCAGCTaGTGGGGACATTCTCTCATGATAGCACAGGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LTLRPCLASNVS*WGHSLMIAQGS Trigger: AGACCCCTGTGCTATCATGAGAGAATGTCCCCATCAGCTGACATTTGAAGCTAAGCATGGTCTAAGTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | CGGAGCTGGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACTGCCAGCGACGGGCAGCCTaGCAGCAGGGAGCACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: RSWGSGQAEDFREGQCDCQRRAA*QQGAQR Trigger: CCGCTGTGCTCCCTGCTGCCAGGCTGCCCGTCGCTG...GCAGTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| CDS-3UTR TCA 90 bp | TGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGTGGCAGGAGCAGAGCAGCAGCCGCTaGGTAGGGCCCACAGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: CLPTALWGSNGHQNGWQEQSSSR*VGPTVR Trigger: GCGGACTGTGGGCCCTACTCAGCGGCTGCTGCTCTG...CTCCTGCCACCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | TCAGAACGGGTGGCAGGAGGATGGCTGCCAACAGGAGCTACAGGTCTAGACTTCCATTTCGGACGCCGCTaGCCGGCGCCGCCGGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SERVAGGWLPTGATGLDFHFGRR*PAPPES Trigger: CGACTCCGGCGGCGCCGGCCAGCGGCGTCCGAAATG...GAAGTCTAGACCTGTAGCTCCTGTTGGCAGCCATCCTCCTGCCACCCGTTCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | GCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCCTGTCCTCCCGCAGGCGCTaGTGCAGCTCACCCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: ALQKPSLVPSRCLGSHSLSSRRR*CSSPMS Trigger: GGACATGGGTGAGCTGCACCAGCGCCTGCGGGAGGA...CAGGCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | CCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCCTGGTGGCTGCAGACGACCCTCTGCATGGGTaGGATGTTGGGGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLVPSRCLGSHSLVAADDPLHG*DVGALQ Trigger: CTGGAGGGCCCCAACATCCCACCCATGCAGAGGGTC...GTCTGCAGCCACCAGGCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCCACAGCCTGGTGGCTGCAGACCTGGGCACACACATCCTCAGTACTGTCCCTGCCTGCCACATCTaGTCTGCTACCTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSHSLVAADLGTHILSTVPACHI*SATCRL Trigger: GAGCCGGCAGGTAGCAGATCAGATGTGGCAGGCAGG...GACAGTACTGAGGATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | CCCCGGAGCTGGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACTCTCTGGGGACCCTCTaGATGGGTGGGATGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PRSWGSGQAEDFREGQCDSLGTL*MGGMLG Trigger: CCCCAACATCCCACCCATGCAGAGGGTCCCCAGAGA...GTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCCTGGCATGGGTGGGATGTTaGGGCCCTCCAGGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALQKPSLVPSRCLGSHSLAWVGC*GPPGCP Trigger: TGGACACCCTGGAGGGCCCCAACATCCCACCCATGC...CAGGCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR GCA 90 bp | ATGAGGACTGTGGGCTGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGTCCCGCAGGCGCTGGTaGAGCTCACCCATGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: MRTVGCLPTALWGSNGHQSRRRW*SSPMSS Trigger: CGAGGACATGGGTGAGCTGCACCAGCGCCTGCGGGA...CTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCAGCCCACAGTCCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | ACTGTGGGCTGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGTGGGGACCCTCTGCATaGGTGGGATGTTGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TVGCLPTALWGSNGHQNGWGPSA*VGCWGP Trigger: AGGGCCCCAACATCCCACCCATGCAGAGGGTCCCCA...CCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCAGCCCACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | CCCCGGAGCTGGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACAGCCTGTCTCTTCCCTaGCTGCCACATCTGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRSWGSGQAEDFREGQCDSLSLP*LPHLIC Trigger: GCAGATCAGATGTGGCAGGCAGGGAAGAGACAGGCT...GTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACGACCCTCTGCATGGGTaGGATGTTGGGGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCALQKPSLVPSRCLGSHDPLHG*DVGALQ Trigger: CTGGAGGGCCCCAACATCCCACCCATGCAGAGGGTC...GTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | TTAGGCAGCCACAGCCTGGTGGCTGCAGACCTGGGCACACACATCCTCAGTACTCAGCGGGGATGTCTCTaGGGACCCTCTGCATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGSHSLVAADLGTHILSTQRGCL*GPSAWV Trigger: CACCCATGCAGAGGGTCCCCAGAGACATCCCCGCTG...AGTACTGAGGATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCCTGCTCGAAGCTGGAGCCTaGGGTATCGTCCATGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALQKPSLVPSRCLGSHSLLEAGA*GIVHVL Trigger: GAGAACATGGACGATACCTCAGGCTCCAGCTTCGAG...CAGGCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | TGCACCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGCAGCGACGGGCAGCCTaGCAGCAGGGAGCACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: CTCCDEKQCTLGLDFLPWQRRAA*QQGAQR Trigger: CCGCTGTGCTCCCTGCTGCCAGGCTGCCCGTCGCTG...CCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR TCA 90 bp | CCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCCTGGTGGCTGCAGACAGGCAAGGAAATAAATaGAGGACGAGACACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLVPSRCLGSHSLVAADRQGNK*RTRHPA Trigger: GGCTGGGTGTCTCGTCCTTCATTTATTTCCTTGCCT...GTCTGCAGCCACCAGGCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | TGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCGCCGAACCCCCACCCTaGATGTTTTCTTCGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CALQKPSLVPSRCLGSHSAEPPP*MFSSKP Trigger: AGGCTTCGAAGAAAACATCCAGGGTGGGGGTTCGGC...GCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACTGCAGAGTCACTGCTATGGGGACCCTCTGCATaGGTGGGATGTTGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QGRPRISERVNVTAESLLWGPSA*VGCWGP Trigger: AGGGCCCCAACATCCCACCCATGCAGAGGGTCCCCA...TAGCAGTGACTCTGCAGTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | ACACATCCTCAGTACTGTCCTTTAATCTTCCTCTGCCCCGGAGCTGGGGGTCAGCAGCGGGGATGTCTCTaGGGACCCTCTGCATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: THPQYCPLIFLCPGAGGQQRGCL*GPSAWV Trigger: CACCCATGCAGAGGGTCCCCAGAGACATCCCCGCTG...CTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGGACAGTACTGAGGATGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR GCA 90 bp | ACTGTGGGCTGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGCCCATCCTCTTCTTCTaGAGCAGCTGCATCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TVGCLPTALWGSNGHQNGPILFF*SSCISI Trigger: GATGCTGATGCAGCTGCTGCAGAAGAAGAGGATGGG...CCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCAGCCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | TGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACCATCTCTGGGGACCCTCTaGATGGGTGGGATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRHPEVLGGAGAKSNCEPSLGTL*MGGMLG Trigger: CCCCAACATCCCACCCATGCAGAGGGTCCCCAGAGA...TGGTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | TCTTGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACTCGCCCGCGACTTTCTaGGGGAAGTTGACCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCALQKPSLVPSRCLGSHSPATF*GKLTIL Trigger: CAAGATGGTCAACTTCCCCCAGAAAGTCGCGGGCGA...GTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | TTAGGCAGCCACAGCCTGGTGGCTGCAGACCTGGGCACACACATCCTCAGTACTTCGCCCGCGACTTTCTaGGGGAAGTTGACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSHSLVAADLGTHILSTSPATF*GKLTIL Trigger: CAAGATGGTCAACTTCCCCCAGAAAGTCGCGGGCGA...AGTACTGAGGATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACAGCGAAGTCTTCATTCCATaGAGGAGGATGGCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CALQKPSLVPSRCLGSHSEVFIP*RRMATS Trigger: ACTGGTGGCCATCCTCCTGCATGGAATGAAGACTTC...GCTGTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | AGTGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACAGCCTGCTTCGGACCTaGGCAGGCTCCACATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGTLRSLEELELKATVNSLLRT*AGSTSK Trigger: CTTTGATGTGGAGCCTGCCCAGGTCCGAAGCAGGCT...GTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR TCA 90 bp | CCTAGCTGTGAGTTCCTGGTCTTGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGAGGCAAGGAAATAAATaGAGGACGAGACACCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSCEFLVLCPSEAKPGAQRQGNK*RTRHPA Trigger: GGCTGGGTGTCTCGTCCTTCATTTATTTCCTTGCCT...CTGGGCACCAGGCTTGGCTTCTGAAGGGCACAAGACCAGGAACTCACAGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CCA 90 bp | GTGGTTTGGAACTCTGTTGACTGGGTTGGCCTTGAAGATCCATGTTCCTGTGCAGCATGGGTGGGATGTTaGGGCCCTCCAGGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWNSVDWVGLEDPCSCAAWVGC*GPPGCP Trigger: TGGACACCCTGGAGGGCCCCAACATCCCACCCATGC...TGCACAGGAACATGGATCTTCAAGGCCAACCCAGTCAACAGAGTTCCAAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | TGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGTGGCAGGAGTTCTTCTGCAGCAGCTaGATCAGCATCTACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPTALWGSNGHQNGWQEFFCSS*ISIYFF Trigger: GAAGAAGTAGATGCTGATGCAGCTGCTGCAGAAGAA...CTCCTGCCACCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CCA 90 bp | GAGGAGCTGGAGCTAAAAGCAACTGTGAACCATCCAGCATGGGTGCTGGGAACTCCATGTCCTCGAAGCTaGAGCCTGAGGTATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EELELKATVNHPAWVLGTPCPRS*SLRYRP Trigger: TGGACGATACCTCAGGCTCCAGCTTCGAGGACATGG...AGTTCCCAGCACCCATGCTGGATGGTTCACAGTTGCTTTTAGCTCCAGCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | TGCACCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGAGCCTGTCTCTTCCCTaGCTGCCACATCTGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTCCDEKQCTLGLDFLPWSLSLP*LPHLIC Trigger: GCAGATCAGATGTGGCAGGCAGGGAAGAGACAGGCT...CCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR GCA 90 bp | AGTGCAGGCACCCTGAGGTCCTTGGAGGAGCTGGAGCTAAAAGCAACTGTGAACGAAGTCTTCATTCCATaGAGGAGGATGGCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGTLRSLEELELKATVNEVFIP*RRMATS Trigger: ACTGGTGGCCATCCTCCTGCATGGAATGAAGACTTC...GTTCACAGTTGCTTTTAGCTCCAGCTCCTCCAAGGACCTCAGGGTGCCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CAA 72 bp | TATGGCCCTAAGTGGTTTGGAACTCTGTTGACTGGGTaGGCCTTGAAGATCCATGTTCCTGTGCACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGPKWFGTLLTG*ALKIHVPVHLL Trigger: CAGCAGGTGCACAGGAACATGGATCTTCAAGGCCAACCCAGTCAACAGAGTTCCAAACCACTTAGGGCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CAA 72 bp | AAAGAACTGTATGGCCCTAAGTGGTTTGGAACTCTGTaGACTGGGTTGGCCTTGAAGATCCATGTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KELYGPKWFGTL*TGLALKIHVPV Trigger: CACAGGAACATGGATCTTCAAGGCCAACCCAGTCAACAGAGTTCCAAACCACTTAGGGCCATACAGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CAA 72 bp | GGTCTTTGTAATGATGTAAGTGGAAATTTGTCATTGTaGCCCTGGCCTCTCAAAAGGACAGCCAGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCNDVSGNLSL*PWPLKRTASLA Trigger: TGCTAGGCTGGCTGTCCTTTTGAGAGGCCAGGGCAACAATGACAAATTTCCACTTACATCATTACAAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| 3UTR CAA 72 bp | AGGGGTCTTTGTAATGATGTAAGTGGAAATTTGTCATaGTTGCCCTGGCCTCTCAAAAGGACAGCCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCNDVSGNLS*LPWPLKRTASL Trigger: TAGGCTGGCTGTCCTTTTGAGAGGCCAGGGCAACAATGACAAATTTCCACTTACATCATTACAAAGACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | GCAGTAATGGGCATCAGAACGGGTGGCAGGAGGATGGCTGCCAACAGGAGCTACTGCATGGGTGGGATGTaGGGGCCCTCCAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVMGIRTGGRRMAANRSYCMGGM*GPSRVS Trigger: GGACACCCTGGAGGGCCCCAACATCCCACCCATGCA...GTAGCTCCTGTTGGCAGCCATCCTCCTGCCACCCGTTCTGATGCCCATTACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | TCTTGTGCCCTTCAGAAGCCAAGCCTGGTGCCCAGCAGGTGTTTAGGCAGCCACTGCATGGGTGGGATGTaGGGGCCCTCCAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCALQKPSLVPSRCLGSHCMGGM*GPSRVS Trigger: GGACACCCTGGAGGGCCCCAACATCCCACCCATGCA...GTGGCTGCCTAAACACCTGCTGGGCACCAGGCTTGGCTTCTGAAGGGCACAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS GCA 90 bp | GCAGCAGCTGCATCAGCATCTACTTCTTCCTCCCGCAGGCGCTGGTaGAGCTCACCCATGTCCTCGAAGCTGGAGCCTGAGGTATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAASASTSSSRRRW*SSPMSSKLEPEVSS Trigger: GGACGATACCTCAGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAGCGCCTGCGGGAGGAAGAAGTAGATGCTGATGCAGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS TCA 90 bp | CCGCAGGCGCTGGTGCAGCTCACCCATGTCCTCGAAGCTGGAGCCTaGGGTATCGTCCATGTTCTCCATATCAATCACAGCCGAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PQALVQLTHVLEAGA*GIVHVLHINHSRTP Trigger: GGGGGTTCGGCTGTGATTGATATGGAGAACATGGACGATACCTCAGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAGCGCCTGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS CCA 90 bp | CTTCCTCCCGCAGGCGCTGGTGCAGCTCACCCATGTCCTCGAAGCTaGAGCCTGAGGTATCGTCCATGTTCTCCATATCAATCACAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPPAGAGAAHPCPRS*SLRYRPCSPYQSQP Trigger: CGGCTGTGATTGATATGGAGAACATGGACGATACCTCAGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAGCGCCTGCGGGAGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | CCCCGGAGCTGGGGGTCAGGGCAGGCCGAGGATTTCAGAGAGGGTCAATGTGACGGGAAGTTGACCATCTaGATAGGGATCATGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSWGSGQAEDFREGQCDGKLTI*IGIMDS Trigger: GGAGTCCATGATCCCTATCAAGATGGTCAACTTCCC...GTCACATTGACCCTCTCTGAAATCCTCGGCCTGCCCTGACCCCCAGCTCCGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127378.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCCACAGCCTGGTGGCTGCAGACCTGGGCACACACATCCTCAGTACTGTCCTGAGGATGTCAATGTaGGCATACAAGCTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSLVAADLGTHILSTVLRMSM*AYKLKA Trigger: GGCCTTCAGCTTGTATGCCAACATTGACATCCTCAG...GACAGTACTGAGGATGTGTGTGCCCAGGTCTGCAGCCACCAGGCTGTGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CAA 90 bp | TGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGTGGCAGGAGTACCTGCCGGCTCAGTaGTCCTTTAAAGCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPTALWGSNGHQNGWQEYLPAQ*SFKAFH Trigger: ATGAAAGGCTTTAAAGGACAACTGAGCCGGCAGGTA...CTCCTGCCACCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | TGCCTACCCACTGCTCTGTGGGGCAGTAATGGGCATCAGAACGGGTGGCAGGAGACTTTCTGGGGGAAGTaGACCATCTTGATAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CLPTALWGSNGHQNGWQETFWGK*TILIGI Trigger: GATCCCTATCAAGATGGTCAACTTCCCCCAGAAAGT...CTCCTGCCACCCGTTCTGATGCCCATTACTGCCCCACAGAGCAGTGGGTAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | ACTGTGAACCATCCAGCATGGGTGCTGGGAACTGGTCTAGTCCCCTCAAAGAACGGGAAGTTGACCATCTaGATAGGGATCATGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVNHPAWVLGTGLVPSKNGKLTI*IGIMDS Trigger: GGAGTCCATGATCCCTATCAAGATGGTCAACTTCCC...GTTCTTTGAGGGGACTAGACCAGTTCCCAGCACCCATGCTGGATGGTTCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS-3UTR CAA 90 bp | ACACATCCTCAGTACTGTCCTTTAATCTTCCTCTGCCCCGGAGCTGGGGGTCAGACTTTCTGGGGGAAGTaGACCATCTTGATAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: THPQYCPLIFLCPGAGGQTFWGK*TILIGI Trigger: GATCCCTATCAAGATGGTCAACTTCCCCCAGAAAGT...CTGACCCCCAGCTCCGGGGCAGAGGAAGATTAAAGGACAGTACTGAGGATGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000095263.10 ENSMUST00000127378.2 |
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| CDS-3UTR CAA 90 bp | TGCACCTGCTGCGATGAAAAGCAATGTACACTTGGCCTGGATTTCCTTCCGTGGCTGAGGATGTCAATGTaGGCATACAAGCTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTCCDEKQCTLGLDFLPWLRMSM*AYKLKA Trigger: GGCCTTCAGCTTGTATGCCAACATTGACATCCTCAG...CCACGGAAGGAAATCCAGGCCAAGTGTACATTGCTTTTCATCGCAGCAGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS GCA 72 bp | GCATCAGCATCTACTTCTTCCTCCCGCAGGCGCTGGTaGAGCTCACCCATGTCCTCGAAGCTGGAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASASTSSSRRRW*SSPMSSKLEPE Trigger: CTCAGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAGCGCCTGCGGGAGGAAGAAGTAGATGCTGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS CCA 72 bp | GCTGCATCAGCATCTACTTCTTCCTCCCGCAGGCGCTaGTGCAGCTCACCCATGTCCTCGAAGCTGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AASASTSSSRRR*CSSPMSSKLEP Trigger: AGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAGCGCCTGCGGGAGGAAGAAGTAGATGCTGATGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS TCA 72 bp | CTGGTGCAGCTCACCCATGTCCTCGAAGCTGGAGCCTaGGGTATCGTCCATGTTCTCCATATCAATCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVQLTHVLEAGA*GIVHVLHINHS Trigger: GCTGTGATTGATATGGAGAACATGGACGATACCTCAGGCTCCAGCTTCGAGGACATGGGTGAGCTGCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS TCA 72 bp | GGCCGTAGCCCAGCAGTGCCAACATCTGTAGCATGGTaGTCTGGGCGTTACACAGGTAGGCAAGGAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRSPAVPTSVAW*SGRYTGRQGNK Trigger: TTTATTTCCTTGCCTACCTGTGTAACGCCCAGATCACCATGCTACAGATGTTGGCACTGCTGGGCTACGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095263.10 ENSMUST00000123311.8 ENSMUST00000127378.2 |
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| CDS CAA 72 bp | TGCCTGCCACATCTGATCTGCTACCTGCCGGCTCAGTaGTCCTTTAAAGCCTTTCATGCCAAGAAACTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLPHLICYLPAQ*SFKAFHAKKLP Trigger: GGGGAGTTTCTTGGCATGAAAGGCTTTAAAGGACAACTGAGCCGGCAGGTAGCAGATCAGATGTGGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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| CDS CAA 72 bp | AGCTCGCCCGCGACTTTCTGGGGGAAGTTGACCATCTaGATAGGGATCATGGACTCCATATCAATCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPATFWGKLTI*IGIMDSISITA Trigger: GGCTGTGATTGATATGGAGTCCATGATCCCTATCAAGATGGTCAACTTCCCCCAGAAAGTCGCGGGCGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123311.8 |
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| CDS CAA 90 bp | TCTCTTCCCTGCCTGCCACATCTGATCTGCTACCTGCCGGCTCAGTaGTCCTTTAAAGCCTTTCATGCCAAGAAACTCCCCATCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLPCLPHLICYLPAQ*SFKAFHAKKLPILF Trigger: GAAGAGGATGGGGAGTTTCTTGGCATGAAAGGCTTTAAAGGACAACTGAGCCGGCAGGTAGCAGATCAGATGTGGCAGGCAGGGAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095263.10 |
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