Pregenerated sensors for YIPF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032182Ensembl transcript IDs: ENSMUST00000034700.15, ENSMUST00000078572.9, ENSMUST00000180365.9, ENSMUST00000213809.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACCCTCCTaGCCTGTCAGGGAATCAGAGGGCCCTCAGGCAGCTGGGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: QEPLGKGWSCSVPPS*PVRESEGPQAAGNQ Trigger: CTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGACAGGTCAGGAGGGTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR GCA 90 bp | ACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTaGCACCCTCCTGACCTGTCAGGGAATCAGAGGGCCCTCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TACHRNPLAKAGAAL*HPPDLSGNQRALRQ Trigger: CTGCCTGAGGGCCCTCTGATTCCCTGACAGGTCAGGAGGGTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR CCA 90 bp | CTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTTaGCAAAGGCTGGAGCTGCTCTGTGCCACCCTCCTGACCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LESPPQWPQPATGTP*QRLELLCATLLTCQ Trigger: CTGACAGGTCAGGAGGGTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR CCA 90 bp | GCCACCCTCCTGACCTGTCAGGGAATCAGAGGGCCCTCAGGCAGCTaGGAACCAGGCTCTCTCCTGTCCATCAGTAATACTCCTTGCTCG | + |
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Preference number: 1 (lower is better) Translates to: ATLLTCQGIRGPSGS*EPGSLLSISNTPCS Trigger: CGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGACAGGTCAGGAGGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR GCA 90 bp | GGCAGCTGGGAACCAGGCTCTCTCCTGTCCATCAGTAATACTCCTTaGTCGGCTGCCCCTCCCCCACCTTTATATAAATTCTCTGGATCA | + |
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Preference number: 1 (lower is better) Translates to: GSWEPGSLLSISNTP*SAAPPPPLYKFSGS Trigger: TGATCCAGAGAATTTATATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTGGTTCCCAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR TCA 90 bp | CTTCATAGGGAGGGCAGGACAAGTAGTATCCCCTTGAGTTTGGCCTaGAAAAGAAAGACTCCTAGGAATGGTCCCAGGAGGAGGGTACAT | + |
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Preference number: 1 (lower is better) Translates to: LHREGRTSSIPLSLA*KRKTPRNGPRRRVH Trigger: ATGTACCCTCCTCCTGGGACCATTCCTAGGAGTCTTTCTTTTTCAGGCCAAACTCAAGGGGATACTACTTGTCCTGCCCTCCCTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACGGGCCCTCAGGCAGCTaGGAACCAGGCTCTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ATACHRNPLAKAGAALCHGPSGS*EPGSLL Trigger: CAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCC...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAAACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGCCACAGGAACCCCTTaGCAAAGGCTGGAGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LRNPAGRAKPAAPVPRPRATGTP*QRLELL Trigger: GAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGC...TCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGTTTCTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAGGGCCCTCAGGCAGCTaGGAACCAGGCTCTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSRQQPWEGASQGPPQTRGPSGS*EPGSLL Trigger: CAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCC...TCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGGTTCTAGTCACCCTGGGCTACTaGGGCAGACAAGAAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TRLAGPSQQPLFLGPEVLVTLGY*GRQETS Trigger: TGAGGTTTCTTGTCTGCCCCAGTAGCCCAGGGTGAC...TAGAACCTCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR CAA 90 bp | CCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTaGGCAAAGGCTGGAGCTGCTCTGTGCCACCCTCCTGACCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PRVPTSMATACHRNP*AKAGAALCHPPDLS Trigger: TGACAGGTCAGGAGGGTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACTACTCCTTGCTCGGCTaGCCCTCCCCCACCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: ATACHRNPLAKAGAALCHYSLLG*PSPTFI Trigger: TATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTA...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGTACTCCTTGCTCGGCTaGCCCTCCCCCACCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: QPWEGASQGPPQTRRKAKYSLLG*PSPTFI Trigger: TATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTA...CTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCACCTCAATGGCCACATACTCCTTGCTCGGCTaGCCCTCCCCCACCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: HRQFPLFPYPRVPTSMATYSLLG*PSPTFI Trigger: TATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTA...TGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCAATGGCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTAACCAACACAGAAACTaGTCCCTCACCTATGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TSMATACHRNPLAKAGAANQHRN*SLTYEP Trigger: AGGCTCATAGGTGAGGGACCAGTTTCTGTGTTGGTT...AGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAACCCTTGAGTTTGGCCTaGAAAAGAAAGACTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQDSNPGKEPRRDLPRQEPLSLA*KRKTPR Trigger: CCTAGGAGTCTTTCTTTTTCAGGCCAAACTCAAGGG...TTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAGCCCCCTCCCACCAAAGGGTTCACCTCAAACTTGAATGTACAAACCACCGTCACCCTGGGCTACTaGGGCAGACAAGAAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: AQPPPTKGFTSNLNVQTTVTLGY*GRQETS Trigger: TGAGGTTTCTTGTCTGCCCCAGTAGCCCAGGGTGAC...GGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTTGGTGGGAGGGGGCTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCAAAGGCCTAGTCCCTACTTTCTGCTACTGTCCTGTCCTGAGCCCTGAAGTCACCCTGGGCTACTaGGGCAGACAAGAAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSKGLVPTFCYCPVLSPEVTLGY*GRQETS Trigger: TGAGGTTTCTTGTCTGCCCCAGTAGCCCAGGGTGAC...TTCAGGGCTCAGGACAGGACAGTAGCAGAAAGTAGGGACTAGGCCTTTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAATGTACAAACCACCCAGCTGTCCAAAGGCCTAGTCCCTACTTTCTGCTATCAAGACAGCAACCCTaGGAAGGAGCCTCGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LECTNHPAVQRPSPYFLLSRQQP*EGASQG Trigger: TCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGA...TAGCAGAAAGTAGGGACTAGGCCTTTGGACAGCTGGGTGGTTTGTACATTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCCCCCTCCCACCAAAGGGTTCACCTCAAACTTGAATGTACAAACCACCCCCTTGAGTTTGGCCTaGAAAAGAAAGACTCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: AQPPPTKGFTSNLNVQTTPLSLA*KRKTPR Trigger: CCTAGGAGTCTTTCTTTTTCAGGCCAAACTCAAGGG...GGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTTGGTGGGAGGGGGCTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAGTCCCCACCTCAATaGCCACAGCCTGCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: CVAFTFMFYLILSRQQPWESPPQ*PQPATG Trigger: TCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTC...CCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGATCAATGGCCACAGCCTaGCACAGGAACCCCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: CCVHIHVLLNPLKTATLGSMATA*HRNPLA Trigger: TGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGA...TCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAGGAAGGGTGATTAATAAGCACAGGCAGTTTCCCCTATTCCCTTACCCTTACTCCTTGCTCGGCTaGCCCTCCCCCACCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: KEGRVINKHRQFPLFPYPYSLLG*PSPTFI Trigger: TATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTA...AGGGTAAGGGAATAGGGGAAACTGCCTGTGCTTATTAATCACCCTTCCTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGTTCACCTCAAACTTGAATGTACAAACCACCCAGCTGTCCAAAGGCCTAAACCAACACAGAAACTaGTCCCTCACCTATGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: KGFTSNLNVQTTQLSKGLNQHRN*SLTYEP Trigger: AGGCTCATAGGTGAGGGACCAGTTTCTGTGTTGGTT...TAGGCCTTTGGACAGCTGGGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR TCA 72 bp | CCAGCAGCCCCTGTTCCTAGGCCCAGAGGTTCTAGGTaGGGGGTGGCCCTGTCAAGCCTTCAGAGTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PAAPVPRPRGSR*GVALSSLQSGH Trigger: GTGCCCACTCTGAAGGCTTGACAGGGCCACCCCTCACCTAGAACCTCTGGGCCTAGGAACAGGGGCTGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCAAAGGCCTAGTCCCTACTTTCTGCTACTGTCCTGTCCTGAGCCCTGAATGCCACAGGAACCCCTaGGCAAAGGCTGGAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LSKGLVPTFCYCPVLSPECHRNP*AKAGAA Trigger: AGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCA...TTCAGGGCTCAGGACAGGACAGTAGCAGAAAGTAGGGACTAGGCCTTTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR CCA 72 bp | CTGACCTGTCAGGGAATCAGAGGGCCCTCAGGCAGCTaGGAACCAGGCTCTCTCCTGTCCATCAGTAATACT | + |
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Preference number: 3 (lower is better) Translates to: LTCQGIRGPSGS*EPGSLLSISNT Trigger: AGTATTACTGATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGACAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCAAAGGCCTAGTCCCTACTTTCTGCTACTGTCCTGTCCTGAGCCCTGAACCCTCCATCAAAAGCTaGAACAGGCAGCCCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: LSKGLVPTFCYCPVLSPEPSIKS*NRQPRV Trigger: CACTCTGGGCTGCCTGTTCAAGCTTTTGATGGAGGG...TTCAGGGCTCAGGACAGGACAGTAGCAGAAAGTAGGGACTAGGCCTTTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR CCA 72 bp | TTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTaGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: FMFYLILSRQQP*EGASQGPPQTR Trigger: TCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR TCA 72 bp | GAGGGCAGGACAAGTAGTATCCCCTTGAGTTTGGCCTaGAAAAGAAAGACTCCTAGGAATGGTCCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: EGRTSSIPLSLA*KRKTPRNGPRR Trigger: CCTCCTGGGACCATTCCTAGGAGTCTTTCTTTTTCAGGCCAAACTCAAGGGGATACTACTTGTCCTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
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| 3UTR GCA 72 bp | GAACCAGGCTCTCTCCTGTCCATCAGTAATACTCCTTaGTCGGCTGCCCCTCCCCCACCTTTATATAAATTC | + |
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Preference number: 3 (lower is better) Translates to: EPGSLLSISNTP*SAAPPPPLYKF Trigger: GAATTTATATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CAA 90 bp | GCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGAACAAGTAGTATCCCCTaGAGTTTGGCCTATGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: AFTFMFYLILSRQQPWEGTSSIP*SLAYEP Trigger: AGGCTCATAGGCCAAACTCAAGGGGATACTACTTGT...TCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078572.9 ENSMUST00000213809.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGACAAGTAGTATCCCCTaGAGTTTGGCCTATGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: CVAFTFMFYLILSRQQPWTSSIP*SLAYEP Trigger: AGGCTCATAGGCCAAACTCAAGGGGATACTACTTGT...CCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078572.9 ENSMUST00000213809.2 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACCGCTCCCTCGTGCCCTaGCGCCACCGCAGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ATACHRNPLAKAGAALCHRSLVP*RHRRKP Trigger: GGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCG...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS-3UTR TCA 90 bp | ATGGCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCGCTCCCTCGTGCCCTaGCGCCACCGCAGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: MATACHRNPLAKAGAALCRSLVP*RHRRKP Trigger: GGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCG...GCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS-3UTR CCA 90 bp | CTGAGAAACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGGTGCTGGCACCACATaGTCCAGAGGCAGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRNPAGRAKPAAPVPRPRGAGTT*SRGSGW Trigger: CCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACC...TCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGTTTCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS-3UTR TCA 90 bp | ACCCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTTGGCAATACCAGCCCGGCTGCTaGCAAGGCCAGGCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TLESPPQWPQPATGTPWQYQPGC*QGQAQG Trigger: GCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTA...TTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACTACCAGCCCGGCTGCTaGCAAGGCCAGGCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QALSCPSVILLARLPLPHYQPGC*QGQAQG Trigger: GCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTA...GTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS-3UTR TCA 90 bp | CTCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGATACCAGCCCGGCTGCTaGCAAGGCCAGGCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSRQQPWEGASQGPPQTRYQPGC*QGQAQG Trigger: GCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTA...TCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS-3UTR CCA 90 bp | ACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGGTTCTAGGGGGCTGTAGTGAATaGAGGGGTCCCGTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TRLAGPSQQPLFLGPEVLGGCSE*RGPVSV Trigger: CACAGAGACGGGACCCCTCCATTCACTACAGCCCCC...TAGAACCTCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS-3UTR CCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACGGTGCTGGCACCACATaGTCCAGAGGCAGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ATACHRNPLAKAGAALCHGAGTT*SRGSGW Trigger: CCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACC...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACCAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATACHRNPLAKAGAALCHQQATV*IPARLL Trigger: CAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTG...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACGGGGGCTGTAGTGAATaGAGGGGTCCCGTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATACHRNPLAKAGAALCHGGCSE*RGPVSV Trigger: CACAGAGACGGGACCCCTCCATTCACTACAGCCCCC...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTACCCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTGGTGCTGGCACCACATaGTCCAGAGGCAGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLESPPQWPQPATGTPGAGTT*SRGSGW Trigger: CCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACC...AGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCCTGCAAAACAGCAGGGTAGTCTCCAGGGTCCAAGAATCCTCCCATCTCGCTCCCTCGTGCCCTaGCGCCACCGCAGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPAKQQGSLQGPRILPSRSLVP*RHRRKP Trigger: GGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCG...AGATGGGAGGATTCTTGGACCCTGGAGACTACCCTGCTGTTTTGCAGGCTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGCAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTATLGRSLAGTSPDKKQQATV*IPARLL Trigger: CAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTG...CTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | ACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGGTTCTACGGTTTCTAAGATGGTaGCGCACAAAGTTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLAGPSQQPLFLGPEVLRFLRW*RTKLWP Trigger: TGGCCACAACTTTGTGCGGCACCATCTTAGAAACCG...TAGAACCTCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGAATCAGAGGGCCCTCAGGCAGCTGGGAACCAGGCTCTCTCCTGTCCATGGGGGCTGTAGTGAATaGAGGGGTCCCGTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGNQRALRQLGTRLSPVHGGCSE*RGPVSV Trigger: CACAGAGACGGGACCCCTCCATTCACTACAGCCCCC...ATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGGTGTAGCTTGGGGTaGTGGCACCACATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRQQPWEGASQGPPQTRRCSLG*WHHMVQ Trigger: CTGGACCATGTGGTGCCAGCACCCCAAGCTACACCT...TCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCTGGGCTGGATTGAACTaGGCAGCAGGACATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MATACHRNPLAKAGAALCWAGLN*AAGHWE Trigger: CTCCCAATGTCCTGCTGCCCAGTTCAATCCAGCCCA...GCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGCAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPWEGASQGPPQTRRKAKQQATV*IPARLL Trigger: CAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTG...CTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAAGGTGTAGCTTGGGGTaGTGGCACCACATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQDSNPGKEPRRDLPRQERCSLG*WHHMVQ Trigger: CTGGACCATGTGGTGCCAGCACCCCAAGCTACACCT...TTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTTGGCAATGGGCTGGATTGAACTaGGCAGCAGGACATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLESPPQWPQPATGTPWQWAGLN*AAGHWE Trigger: CTCCCAATGTCCTGCTGCCCAGTTCAATCCAGCCCA...TTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGTGTCATGGGCTGGATTaGACTGGGCAGCAGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: LKTATLGRSLAGTSPDKKCHGLD*TGQQDI Trigger: AATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACA...CTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGTTGGCTAGTAGTAGCTaGATCTGGGGTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTATLGRSLAGTSPDKKLASSS*IWGLCQ Trigger: CTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAA...CTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACCTTTATTGCCGCACAAAGTTGTaGCCAGGATGGGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCPSVILLARLPLPHLYCRTKL*PGWGSR Trigger: CCTGCTGCCCCATCCTGGCCACAACTTTGTGCGGCA...ATAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTTGCTTTGTAAGAAAAGCCTGCAAAACAGCAGGGTAGTCTCCAGGGTCTACCAGCCCGGCTGCTaGCAAGGCCAGGCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCLLCKKSLQNSRVVSRVYQPGC*QGQAQG Trigger: GCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTA...GACCCTGGAGACTACCCTGCTGTTTTGCAGGCTTTTCTTACAAAGCAAACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCACCTCAATGGCCACAAGGTGTAGCTTGGGGTaGTGGCACCACATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRQFPLFPYPRVPTSMATRCSLG*WHHMVQ Trigger: CTGGACCATGTGGTGCCAGCACCCCAAGCTACACCT...TGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGGAATGGTCCCAGGAGGAGGGTACATCCTCAACCAACACAGAAACTGGTGCCGCACAAAGTTGTaGCCAGGATGGGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGMVPGGGYILNQHRNWCRTKL*PGWGSR Trigger: CCTGCTGCCCCATCCTGGCCACAACTTTGTGCGGCA...CCAGTTTCTGTGTTGGTTGAGGATGTACCCTCCTCCTGGGACCATTCCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034700.15 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCAGGACGGTTTCTAAGATaGTGCCGCACAAAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSLLSISNTPCSAAPPPGRFLR*CRTKLW Trigger: CCACAACTTTGTGCGGCACCATCTTAGAAACCGTCC...TGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTACCCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTGGACGGTTTCTAAGATaGTGCCGCACAAAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLESPPQWPQPATGTPGRFLR*CRTKLW Trigger: CCACAACTTTGTGCGGCACCATCTTAGAAACCGTCC...AGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGAATCAGAGGGCCCTCAGGCAGCTGGGAACCAGGCTCTCTCCTGTCCATTCCAGAGGCAGTGGCTaGAAGAAGTACAGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNQRALRQLGTRLSPVHSRGSG*KKYSLQ Trigger: CTGTAAGCTGTACTTCTTCCAGCCACTGCCTCTGGA...ATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGTCCAGAGGCAGTGGCTaGAAGAAGTACAGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTATLGRSLAGTSPDKKSRGSG*KKYSLQ Trigger: CTGTAAGCTGTACTTCTTCCAGCCACTGCCTCTGGA...CTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGGATGAAGACAAAGAGTaGGTAGCCGTAGACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTATLGRSLAGTSPDKKDEDKE*VAVDTD Trigger: GTCTGTGTCTACGGCTACTCACTCTTTGTCTTCATC...CTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCCCTCAGGCAGCTGGGAACCAGGCTCTCTCCTGTCCATCAGTAATACTTGTCATGGGCTGGATTaGACTGGGCAGCAGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RGPSGSWEPGSLLSISNTCHGLD*TGQQDI Trigger: AATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACA...AGTATTACTGATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTCAGGGAATCAGAGGGCCCTCAGGCAGCTGGGAACCAGGCTCTCTCCTGTGTCAGCTCATCACTTTaGCTAGTAGTAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVRESEGPQAAGNQALSCVSSSL*LVVAAS Trigger: AGATGCAGCTACTACTAGCCAAAGTGATGAGCTGAC...ACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGAATGTCATGGGCTGGATTaGACTGGGCAGCAGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: TLGRSLAGTSPDKKKSKECHGLD*TGQQDI Trigger: AATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACA...TTCTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACCTTTACAGCTCCATAGCCAATaGCTGAACCCACAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSISNTPCSAAPPPPLQLHSQ*LNPQPQ Trigger: CTGTGGTTGTGGGTTCAGGCATTGGCTATGGAGCTG...TAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCACCTCAATGGCCACAGCCTCTGCCAGAAGATTTGTaGCTTCCTCGAACTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSFPYSLTLESPPQWPQPLPEDL*LPRTRG Trigger: TCCACGAGTTCGAGGAAGCCACAAATCTTCTGGCAG...AGGCTGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAACCAGGCTCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCTCCAGAGGCAGTGGCTaGAAGAAGTACAGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SWEPGSLLSISNTPCSAASRGSG*KKYSLQ Trigger: CTGTAAGCTGTACTTCTTCCAGCCACTGCCTCTGGA...GGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTGGTTCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCACCTCAATGGCCACAGCCTAGTAGTAGCTGCATCTaGGGTCTCTGCCAGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GSFPYSLTLESPPQWPQPSSSCI*GLCQKI Trigger: AATCTTCTGGCAGAGACCCCAGATGCAGCTACTACT...AGGCTGTGGCCATTGAGGTGGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACCTTTAGGACGGTTTCTAAGATaGTGCCGCACAAAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSISNTPCSAAPPPPLGRFLR*CRTKLW Trigger: CCACAACTTTGTGCGGCACCATCTTAGAAACCGTCC...TAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTTGCTTTGTAAGAAAAGCCTGCAAAACAGCAGGGTAGTCTCCAGGGTCGGTGCTGGCACCACATaGTCCAGAGGCAGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLCKKSLQNSRVVSRVGAGTT*SRGSGW Trigger: CCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACC...GACCCTGGAGACTACCCTGCTGTTTTGCAGGCTTTTCTTACAAAGCAAACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | GCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGACAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFTFMFYLILSRQQPWEGQQATV*IPARLL Trigger: CAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTG...TCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAGCCTGCAAAACAGCAGGGTAGTCTCCAGGGTCCAAGAATCCTCCCATCTTTGGCTAGTAGTAGCTaGATCTGGGGTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKPAKQQGSLQGPRILPSLASSS*IWGLCQ Trigger: CTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAA...AGATGGGAGGATTCTTGGACCCTGGAGACTACCCTGCTGTTTTGCAGGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR GCA 90 bp | GCACAGCCCCCTCCCACCAAAGGGTTCACCTCAAACTTGAATGTACAAACCACCCGGTTTCTAAGATGGTaGCGCACAAAGTTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQPPPTKGFTSNLNVQTTRFLRW*RTKLWP Trigger: TGGCCACAACTTTGTGCGGCACCATCTTAGAAACCG...GGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTTGGTGGGAGGGGGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | GCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGATGCCGCACAAAGTTGTaGCCAGGATGGGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFTFMFYLILSRQQPWEGCRTKL*PGWGSR Trigger: CCTGCTGCCCCATCCTGGCCACAACTTTGTGCGGCA...TCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCCAAAGGCCTAGTCCCTACTTTCTGCTACTGTCCTGTCCTGAGCCCTGAAGATGAAGACAAAGAGTaGGTAGCCGTAGACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKGLVPTFCYCPVLSPEDEDKE*VAVDTD Trigger: GTCTGTGTCTACGGCTACTCACTCTTTGTCTTCATC...TTCAGGGCTCAGGACAGGACAGTAGCAGAAAGTAGGGACTAGGCCTTTGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGGTTCACCTCAAACTTGAATGTACAAACCACCCAGCTGTCCAAAGGCCTAAGGTGTAGCTTGGGGTaGTGGCACCACATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGFTSNLNVQTTQLSKGLRCSLG*WHHMVQ Trigger: CTGGACCATGTGGTGCCAGCACCCCAAGCTACACCT...TAGGCCTTTGGACAGCTGGGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGAATCCTCCCATCTTCATAGGGAGGGCAGGACAAGTAGTATCCCCTTGCTGCCAGAAGATTTGTaGCTTCCTCGAACTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQESSHLHREGRTSSIPLLPEDL*LPRTRG Trigger: TCCACGAGTTCGAGGAAGCCACAAATCTTCTGGCAG...CAAGGGGATACTACTTGTCCTGCCCTCCCTATGAAGATGGGAGGATTCTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTTCACCTCAAACTTGAATGTACAAACCACCCAGCTGTCCAAAGGCCTAGTTGGGCTGGATTGAACTaGGCAGCAGGACATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVHLKLECTNHPAVQRPSWAGLN*AAGHWE Trigger: CTCCCAATGTCCTGCTGCCCAGTTCAATCCAGCCCA...ACTAGGCCTTTGGACAGCTGGGTGGTTTGTACATTCAAGTTTGAGGTGAACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTGCCCCTCCCCCACCTTTATATAAATTCTCTGGATCACCTTTGCATAGAATGTCATGGGCTGGATTaGACTGGGCAGCAGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RLPLPHLYINSLDHLCIECHGLD*TGQQDI Trigger: AATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACA...TTCTATGCAAAGGTGATCCAGAGAATTTATATAAAGGTGGGGGAGGGGCAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCCCCTCCCCCACCTTTATATAAATTCTCTGGATCACCTTTGCATAGAATTGGCTAGTAGTAGCTaGATCTGGGGTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLPLPHLYINSLDHLCIELASSS*IWGLCQ Trigger: CTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAA...TTCTATGCAAAGGTGATCCAGAGAATTTATATAAAGGTGGGGGAGGGGCAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGGGTCCAAGAATCCTCCCATCTTCATAGGGAGGGCAGGACAAGTAGTGTCAGCTCATCACTTTaGCTAGTAGTAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQESSHLHREGRTSSVSSSL*LVVAAS Trigger: AGATGCAGCTACTACTAGCCAAAGTGATGAGCTGAC...ACTACTTGTCCTGCCCTCCCTATGAAGATGGGAGGATTCTTGGACCCTGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGCAGCTCCATAGCCAATaGCTGAACCCACAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCCVHIHVLLNPLKTATLQLHSQ*LNPQPQ Trigger: CTGTGGTTGTGGGTTCAGGCATTGGCTATGGAGCTG...CAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | GCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGACTGCCAGAAGATTTGTaGCTTCCTCGAACTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFTFMFYLILSRQQPWEGLPEDL*LPRTRG Trigger: TCCACGAGTTCGAGGAAGCCACAAATCTTCTGGCAG...TCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGATTAATAAGCACAGGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCGTCAGCTCATCACTTTaGCTAGTAGTAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RVINKHRQFPLFPYPRVPVSSSL*LVVAAS Trigger: AGATGCAGCTACTACTAGCCAAAGTGATGAGCTGAC...GGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCCTGTGCTTATTAATCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTTCACCTCAAACTTGAATGTACAAACCACCCAGCTGTCCAAAGGCCTAAGTAGTAGCTGCATCTaGGGTCTCTGCCAGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KGFTSNLNVQTTQLSKGLSSSCI*GLCQKI Trigger: AATCTTCTGGCAGAGACCCCAGATGCAGCTACTACT...TAGGCCTTTGGACAGCTGGGTGGTTTGTACATTCAAGTTTGAGGTGAACCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS TCA 90 bp | ACTGTCTCCAGGAAGGTGTACAGCCCCATGCGCTCCCTCGTGCCCTaGCGCCACCGCAGGAAGCCCCACAGCGCCAGCGGCACTAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVSRKVYSPMRSLVP*RHRRKPHSASGTSH Trigger: GTGGCTAGTGCCGCTGGCGCTGTGGGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCTGGAGACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS GCA 90 bp | CACAGACTGTCTCCAGGAAGGTGTACAGCCCCATGCGCTCCCTCGTaGCCTGACGCCACCGCAGGAAGCCCCACAGCGCCAGCGGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: HRLSPGRCTAPCAPS*PDATAGSPTAPAAL Trigger: TAGTGCCGCTGGCGCTGTGGGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCTGGAGACAGTCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS TCA 90 bp | CCGCAGCCACCAGCCGTGTATCCTCTCGGACAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTGACAAGGCCAGGCCCAGGGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PQPPAVYPLGQQATV*IPARLLTRPGPGLQ Trigger: TTGGAGCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTGTCCGAGAGGATACACGGCTGGTGGCTGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS GCA 90 bp | AGTAGCCGTAGACACAGACTGTCTCCAGGAAGGTGTACAGCCCCATaGGCTCCCTCGTGCCCTGACGCCACCGCAGGAAGCCCCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSRRHRLSPGRCTAP*APSCPDATAGSPTA Trigger: CGCTGTGGGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCTGGAGACAGTCTGTGTCTACGGCTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | ACCCGGCTGGCCGGGCCAAGCCAGCAGCCCCTGTTCCTAGGCCCAGAGGTTCTATCTCTGCCAGAAGATTaGTGGCTTCCTCGAACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TRLAGPSQQPLFLGPEVLSLPED*WLPRTR Trigger: ACGAGTTCGAGGAAGCCACAAATCTTCTGGCAGAGA...TAGAACCTCTGGGCCTAGGAACAGGGGCTGCTGGCTTGGCCCGGCCAGCCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCAGATGGAGGTGTAGCTaGGGGTGCTGGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: MATACHRNPLAKAGAALCRWRCS*GCWHHM Trigger: CATGTGGTGCCAGCACCCCAAGCTACACCTCCATCT...GCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS TCA 90 bp | ATCCTCTCGGACAACAGGCCACAGTGTGAATACCAGCCCGGCTGCTaGCAAGGCCAGGCCCAGGGCTCCAAAGAGCCACTGTATCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ILSDNRPQCEYQPGC*QGQAQGSKEPLYPL Trigger: CAGTGGATACAGTGGCTCTTTGGAGCCCTGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTGTCCGAGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | CAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGTGGTGCCGCACAAAGTaGTGGCCAGGATGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPWEGASQGPPQTRRKAKWCRTK*WPGWGS Trigger: GCTGCCCCATCCTGGCCACAACTTTGTGCGGCACCA...CTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTAGAGTCCCCACCTCAATGGCCACAGCCTGCCACAGGAACCCCTTGGCAACTGGGCAGCAGGACATaGGGAGATGGAGGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLESPPQWPQPATGTPWQLGSRT*GDGGVA Trigger: AGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAG...TTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGAGGTGGGGACTCTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTGCCACGGTCAGCTCATCACTTaGGCTAGTAGTAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ATACHRNPLAKAGAALCHGQLIT*ASSSCI Trigger: GATGCAGCTACTACTAGCCAAAGTGATGAGCTGACC...GTGGCACAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGACAGCAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAACTGGGCAGCAGGACATaGGGAGATGGAGGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQDSNPGKEPRRDLPRQELGSRT*GDGGVA Trigger: AGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAG...TTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTGCTGTCTTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS CCA 90 bp | ACTGGGCAGCAGGACATTGGGAGATGGAGGTGTAGCTTGGGGTGCTaGCACCACATGGTCCAGAGGCAGTGGCTGGAAGAAGTACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGQQDIGRWRCSLGC*HHMVQRQWLEEVQL Trigger: AAGCTGTACTTCTTCCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACCCCAAGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGAATCAGAGGGCCCTCAGGCAGCTGGGAACCAGGCTCTCTCCTGTCCATCGGTCAGCTCATCACTTaGGCTAGTAGTAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QGIRGPSGSWEPGSLLSIGQLIT*ASSSCI Trigger: GATGCAGCTACTACTAGCCAAAGTGATGAGCTGACC...GATGGACAGGAGAGAGCCTGGTTCCCAGCTGCCTGAGGGCCCTCTGATTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | CAACCCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGAGATGGAGGTGTAGCTaGGGGTGCTGGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: QPWEGASQGPPQTRRKAKRWRCS*GCWHHM Trigger: CATGTGGTGCCAGCACCCCAAGCTACACCTCCATCT...CTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAAGGAGCCTCGCAGGGACCTCCCCAGACAAGAAGAAAAGCAAAGAAGGAGATGGAGGTGTAGCTaGGGGTGCTGGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: PGKEPRRDLPRQEEKQRRRWRCS*GCWHHM Trigger: CATGTGGTGCCAGCACCCCAAGCTACACCTCCATCT...CCTTCTTTGCTTTTCTTCTTGTCTGGGGAGGTCCCTGCGAGGCTCCTTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | TCAATGGCCACAGCCTGCCACAGGAACCCCTTGGCAAAGGCTGGAGCTGCTCTGTTGTCATGGGCTGGATaGAACTGGGCAGCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SMATACHRNPLAKAGAALLSWAG*NWAAGH Trigger: ATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACAA...CAGAGCAGCTCCAGCCTTTGCCAAGGGGTTCCTGTGGCAGGCTGTGGCCATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACCTTTAAGATGGAGGTGTAGCTaGGGGTGCTGGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSISNTPCSAAPPPPLRWRCS*GCWHHM Trigger: CATGTGGTGCCAGCACCCCAAGCTACACCTCCATCT...TAAAGGTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS GCA 90 bp | CTTGTGGAACTGGGGGCTGTAGTGAATGGAGGGGTCCCGTCTCTGTaGAAGCACCAAAGTGAGATTGCCAGTAACTGCCAGGACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVELGAVVNGGVPSL*KHQSEIASNCQDKG Trigger: GCCTTTGTCCTGGCAGTTACTGGCAATCTCACTTTGGTGCTTGCACAGAGACGGGACCCCTCCATTCACTACAGCCCCCAGTTCCACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS CCA 90 bp | CCCACAACCACAGCCACGTGCTCTCGGGAGGTCAGCTCATCACTTTaGCTAGTAGTAGCTGCATCTGGGGTCTCTGCCAGAAGATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTTATCSREVSSSL*LVVAASGVSARRFV Trigger: CACAAATCTTCTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAAAGTGATGAGCTGACCTCCCGAGAGCACGTGGCTGTGGTTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCTCTCCTGTCCATCAGTAATACTCCTTGCTCGGCTGCCCCTCCCCCACTGTAGAAGTGATGTCTaGTCATCCTCTTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QALSCPSVILLARLPLPHCRSDV*SSSSSP Trigger: AGGGGAGGAAGAGGATGACAAGACATCACTTCTACA...GTGGGGGAGGGGCAGCCGAGCAAGGAGTATTACTGATGGACAGGAGAGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGTGTGTCACCCTGGGCTACTGGGGCAGACAAGAAACCTCAAAGATCTGTTGTCATGGGCTGGATaGAACTGGGCAGCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PRVCHPGLLGQTRNLKDLLSWAG*NWAAGH Trigger: ATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACAA...CAGATCTTTGAGGTTTCTTGTCTGCCCCAGTAGCCCAGGGTGACACACTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTGATTAATAAGCACAGGCAGTTTCCCCTATTCCCTTACCCTAGAGTCCCCCTGGGCAGCAGGACATaGGGAGATGGAGGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVINKHRQFPLFPYPRVPLGSRT*GDGGVA Trigger: AGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAG...GGGGACTCTAGGGTAAGGGAATAGGGGAAACTGCCTGTGCTTATTAATCACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGATGGTGCCGCACAAAGTaGTGGCCAGGATGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCVHIHVLLNPLKTATLGWCRTK*WPGWGS Trigger: GCTGCCCCATCCTGGCCACAACTTTGTGCGGCACCA...TCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGAATCCTCCCATCTTCATAGGGAGGGCAGGACAAGTAGTATCCCCTTGTTGTCATGGGCTGGATaGAACTGGGCAGCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VQESSHLHREGRTSSIPLLSWAG*NWAAGH Trigger: ATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACAA...CAAGGGGATACTACTTGTCCTGCCCTCCCTATGAAGATGGGAGGATTCTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAAAGGCCTAGTCCCTACTTTCTGCTACTGTCCTGTCCTGAGCCCTGAATGTAGAAGTGATGTCTaGTCATCCTCTTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSKGLVPTFCYCPVLSPECRSDV*SSSSSP Trigger: AGGGGAGGAAGAGGATGACAAGACATCACTTCTACA...TTCAGGGCTCAGGACAGGACAGTAGCAGAAAGTAGGGACTAGGCCTTTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGACTGGGCAGCAGGACATaGGGAGATGGAGGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCVHIHVLLNPLKTATLGLGSRT*GDGGVA Trigger: AGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAG...TCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTGCCCCTCCCCCACCTTTATATAAATTCTCTGGATCACCTTTGCATAGAATCTCTGCCAGAAGATTaGTGGCTTCCTCGAACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLPLPHLYINSLDHLCIESLPED*WLPRTR Trigger: ACGAGTTCGAGGAAGCCACAAATCTTCTGGCAGAGA...TTCTATGCAAAGGTGATCCAGAGAATTTATATAAAGGTGGGGGAGGGGCAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | GCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGATTGTCATGGGCTGGATaGAACTGGGCAGCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: AFTFMFYLILSRQQPWEGLSWAG*NWAAGH Trigger: ATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACAA...TCCTTCCCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGCGTTCACATTCATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGTCTCTGCCAGAAGATTaGTGGCTTCCTCGAACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CVAFTFMFYLILSRQQPWSLPED*WLPRTR Trigger: ACGAGTTCGAGGAAGCCACAAATCTTCTGGCAGAGA...CCAGGGTTGCTGTCTTGAGAGGATTAAGTAGAACATGAATGTGAACGCAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGGAAGGGTGATTAATAAGCACAGGCAGTTTCCCCTATTCCCTTACCCTTGTAGAAGTGATGTCTaGTCATCCTCTTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGRVINKHRQFPLFPYPCRSDV*SSSSSP Trigger: AGGGGAGGAAGAGGATGACAAGACATCACTTCTACA...AGGGTAAGGGAATAGGGGAAACTGCCTGTGCTTATTAATCACCCTTCCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS TCA 72 bp | AGGAAGGTGTACAGCCCCATGCGCTCCCTCGTGCCCTaGCGCCACCGCAGGAAGCCCCACAGCGCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKVYSPMRSLVP*RHRRKPHSASG Trigger: GCCGCTGGCGCTGTGGGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS GCA 72 bp | TCTCCAGGAAGGTGTACAGCCCCATGCGCTCCCTCGTaGCCTGACGCCACCGCAGGAAGCCCCACAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGRCTAPCAPS*PDATAGSPTAP Trigger: TGGCGCTGTGGGGCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCTGGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS GCA 72 bp | AGACACAGACTGTCTCCAGGAAGGTGTACAGCCCCATaGGCTCCCTCGTGCCCTGACGCCACCGCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHRLSPGRCTAP*APSCPDATAGS Trigger: GCTTCCTGCGGTGGCGTCAGGGCACGAGGGAGCGCATGGGGCTGTACACCTTCCTGGAGACAGTCTGTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
||
| CDS TCA 72 bp | CCAGCCGTGTATCCTCTCGGACAACAGGCCACAGTGTaGATACCAGCCCGGCTGCTGACAAGGCCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PAVYPLGQQATV*IPARLLTRPGP Trigger: TGGGCCTGGCCTTGTCAGCAGCCGGGCTGGTATTCACACTGTGGCCTGTTGTCCGAGAGGATACACGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS GCA 72 bp | GCCAGGCCCAGGGCTCCAAAGAGCCACTGTATCCACTaGACTGGGATAAGCCACAGGACCACAGTAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: ARPRAPKSHCIH*TGISHRTTVGM Trigger: CATCCCTACTGTGGTCCTGTGGCTTATCCCAGTGCAGTGGATACAGTGGCTCTTTGGAGCCCTGGGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS GCA 72 bp | CAGCAGGACATTGGGAGATGGAGGTGTAGCTTGGGGTaGTGGCACCACATGGTCCAGAGGCAGTGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QQDIGRWRCSLG*WHHMVQRQWLE Trigger: TTCCAGCCACTGCCTCTGGACCATGTGGTGCCAGCACCCCAAGCTACACCTCCATCTCCCAATGTCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS CAA 90 bp | GGGCCATATAGGTCGGGACGGTTTCTAAGATGGTGCCGCACAAAGTaGTGGCCAGGATGGGGCAGCAGGGAGCCTTTGATCCTGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GPYRSGRFLRWCRTK*WPGWGSREPLILSK Trigger: CTTGGACAGGATCAAAGGCTCCCTGCTGCCCCATCCTGGCCACAACTTTGTGCGGCACCATCTTAGAAACCGTCCCGACCTATATGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS TCA 72 bp | CTCTTCCTCCCCTACTTCAGCTCCATAGCCAATGCCTaGACCCACAACCACAGCCACGTGCTCTCGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LFLPYFSSIANA*THNHSHVLSGG Trigger: ACCTCCCGAGAGCACGTGGCTGTGGTTGTGGGTTCAGGCATTGGCTATGGAGCTGAAGTAGGGGAGGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS GCA 72 bp | AAGGGGCCATATAGGTCGGGACGGTTTCTAAGATGGTaGCGCACAAAGTTGTGGCCAGGATGGGGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KGPYRSGRFLRW*RTKLWPGWGSR Trigger: CCTGCTGCCCCATCCTGGCCACAACTTTGTGCGGCACCATCTTAGAAACCGTCCCGACCTATATGGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS CCA 72 bp | CAGAAGGGGCCATATAGGTCGGGACGGTTTCTAAGATaGTGCCGCACAAAGTTGTGGCCAGGATGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QKGPYRSGRFLR*CRTKLWPGWGS Trigger: GCTGCCCCATCCTGGCCACAACTTTGTGCGGCACCATCTTAGAAACCGTCCCGACCTATATGGCCCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS CAA 72 bp | CACAGCCACGTGCTCTCGGGAGGTCAGCTCATCACTTaGGCTAGTAGTAGCTGCATCTGGGGTCTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HSHVLSGGQLIT*ASSSCIWGLCQ Trigger: CTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAAAGTGATGAGCTGACCTCCCGAGAGCACGTGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS CAA 72 bp | GTTGTCATGGGCTGGATTGAACTGGGCAGCAGGACATaGGGAGATGGAGGTGTAGCTTGGGGTGCTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: VVMGWIELGSRT*GDGGVAWGAGT Trigger: GGTGCCAGCACCCCAAGCTACACCTCCATCTCCCAATGTCCTGCTGCCCAGTTCAATCCAGCCCATGACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 ENSMUST00000213809.2 |
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| CDS GCA 72 bp | CTGGGGGCTGTAGTGAATGGAGGGGTCCCGTCTCTGTaGAAGCACCAAAGTGAGATTGCCAGTAACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LGAVVNGGVPSL*KHQSEIASNCQ Trigger: CTGGCAGTTACTGGCAATCTCACTTTGGTGCTTGCACAGAGACGGGACCCCTCCATTCACTACAGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS CCA 72 bp | ACAGCCACGTGCTCTCGGGAGGTCAGCTCATCACTTTaGCTAGTAGTAGCTGCATCTGGGGTCTCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TATCSREVSSSL*LVVAASGVSAR Trigger: TCTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAAAGTGATGAGCTGACCTCCCGAGAGCACGTGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS CAA 90 bp | ACCCACAACCACAGCCACGTGCTCTCGGGAGGTCAGCTCATCACTTaGGCTAGTAGTAGCTGCATCTGGGGTCTCTGCCAGAAGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: THNHSHVLSGGQLIT*ASSSCIWGLCQKIC Trigger: ACAAATCTTCTGGCAGAGACCCCAGATGCAGCTACTACTAGCCAAAGTGATGAGCTGACCTCCCGAGAGCACGTGGCTGTGGTTGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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| CDS GCA 72 bp | TCTCTGTGCAAGCACCAAAGTGAGATTGCCAGTAACTaGCAGGACAAAGGCCAGGGTAGCACAGATCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLCKHQSEIASN*QDKGQGSTDPE Trigger: TTCTGGATCTGTGCTACCCTGGCCTTTGTCCTGGCAGTTACTGGCAATCTCACTTTGGTGCTTGCACAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034700.15 ENSMUST00000078572.9 ENSMUST00000180365.9 |
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