Pregenerated sensors for YIF1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030588Ensembl transcript IDs: ENSMUST00000032809.10, ENSMUST00000108237.2, ENSMUST00000108238.8, ENSMUST00000138128.3, ENSMUST00000142519.3
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTTGCAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTaGAGGCTGCGCCGAGCCCATCAGGTTTATTGTTGCGGGTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: TCSPFRSPAPSAGQK*RLRRAHQVYCCGCA Trigger: TGCACACCCGCAACAATAAACCTGATGGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTGCAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| 3UTR CAA 90 bp | CATCAGGTTTATTGTTGCGGGTGTGCAGTAGGCGACATGAGCACCTaGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HQVYCCGCAVGDMST*ARKEGAGLEGGSPG Trigger: ACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGCACACCCGCAACAATAAACCTGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| 3UTR GCA 72 bp | GCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTaGGCCGAGCCCATCAGGTTTATTGTTGCGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: APQRPLPVRSGG*AEPIRFIVAGV Trigger: CACACCCGCAACAATAAACCTGATGGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| 3UTR CCA 72 bp | CCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTaGAGGCTGCGCCGAGCCCATCAGGTTTATTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: PFRSPAPSAGQK*RLRRAHQVYCC Trigger: GCAACAATAAACCTGATGGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR TCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGACAGCCAGGCCAGAGCTaGGCTCGCCTGCAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGQPGQS*ARLQSQ Trigger: CTGGGACTGCAGGCGAGCTCAGCTCTGGCCTGGCTG...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR TCA 90 bp | CTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCCCCAGCCAGGCCAGAGCTaGGCTCGCCTGCAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSAPQRPLPVRSGGCAEPQPGQS*ARLQSQ Trigger: CTGGGACTGCAGGCGAGCTCAGCTCTGGCCTGGCTG...GGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | CAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGCCTGAGCGGCCAGGCTaGTCCCGTAGACCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: QPFPLPSALCRSEVEAAPPERPG*SRRPSP Trigger: TGGCGATGGTCTACGGGAGCAGCCTGGCCGCTCAGG...CGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGACCTGAGCGGCCAGGCTaGTCCCGTAGACCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGPERPG*SRRPSP Trigger: TGGCGATGGTCTACGGGAGCAGCCTGGCCGCTCAGG...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCCCTGAGCGGCCAGGCTaGTCCCGTAGACCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRPERPG*SRRPSP Trigger: TGGCGATGGTCTACGGGAGCAGCCTGGCCGCTCAGG...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGGGAGAACCTGTCCTaGGTCCCCAGTGCAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGGENLS*VPSARP Trigger: CGGCCTTGCACTGGGGACCCAGGACAGGTTCTCCCC...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGGGGGAGAACCTGTCCTaGGTCCCCAGTGCAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGGENLS*VPSARP Trigger: CGGCCTTGCACTGGGGACCCAGGACAGGTTCTCCCC...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACT | + |
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Preference number: 4 (lower is better) Translates to: PFPLPSALCRSEVEAAPSRYMRS*FRAPRT Trigger: AGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCT...GCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCCCAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACT | + |
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Preference number: 4 (lower is better) Translates to: LSAPQRPLPVRSGGCAEPRYMRS*FRAPRT Trigger: AGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCT...GGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCCCTGAGCGGCCAGGCTaGTCCCGTAGACCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGPERPG*SRRPSP Trigger: TGGCGATGGTCTACGGGAGCAGCCTGGCCGCTCAGG...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGGGATCAGCCATGCCTaGTTGGGACACTGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGGISHA*LGHWDP Trigger: AGGGTCCCAGTGTCCCAACCAGGCATGGCTGATCCC...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGGGGATCAGCCATGCCTaGTTGGGACACTGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: QPFPLPSALCRSEVEAAPGISHA*LGHWDP Trigger: AGGGTCCCAGTGTCCCAACCAGGCATGGCTGATCCC...CGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGGAGAACCTGTCCTaGGTCCCCAGTGCAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGGENLS*VPSARP Trigger: CGGCCTTGCACTGGGGACCCAGGACAGGTTCTCCCC...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCCCCAGTCCCAGGAGGTCTaGGGAGAACCTGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSAPQRPLPVRSGGCAEPQSQEV*GEPVLG Trigger: ACCCAGGACAGGTTCTCCCCAGACCTCCTGGGACTG...GGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGACCAATCATCCTGTCCTaGGTCCCCAGTGCAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGPIILS*VPSARP Trigger: CGGCCTTGCACTGGGGACCCAGGACAGGATGATTGG...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108237.2 |
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| CDS-3UTR TCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGACAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGQRADP*GRRQSS Trigger: GGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTG...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGTATCTACCAGCTCCTTaGCCTGAGCGGCCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGYLPAP*PERPGC Trigger: GCAGCCTGGCCGCTCAGGGCAAGGAGCTGGTAGATA...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTCTGCGCAGCTGCCACTaGCATAGTCAGGTACATGCG | + |
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Preference number: 4 (lower is better) Translates to: GRGPGGREPWSSEMSVGALRSCH*HSQVHA Trigger: CGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAG...AGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCGGGATCAGCCATGCCTaGTTGGGACACTGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRGISHA*LGHWDP Trigger: AGGGTCCCAGTGTCCCAACCAGGCATGGCTGATCCC...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGATCCATAGCCCCGGCTTaGGGCAGAACTCGTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGSIAPA*GRTRVI Trigger: GATGACACGAGTTCTGCCCCAAGCCGGGGCTATGGA...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGCAGTCCCAGGAGGTCTaGGGAGAACCTGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGQSQEV*GEPVLG Trigger: ACCCAGGACAGGTTCTCCCCAGACCTCCTGGGACTG...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACT | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGRYMRS*FRAPRT Trigger: AGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCT...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACT | + |
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Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQRYMRS*FRAPRT Trigger: AGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCT...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGCAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQQRADP*GRRQSS Trigger: GGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTG...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR TCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCCAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGQRADP*GRRQSS Trigger: GGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTG...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGCAGCCCAAGCTTCTTaGCCACATACACCGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRGPGGREPWSSEMSVGAAAQAS*PHTPCP Trigger: TGGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGC...AGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGCTGCGCAGCTGCCACTaGCATAGTCAGGTACATGCG | + |
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Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGLRSCH*HSQVHA Trigger: CGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAG...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGGGATCAGCCATGCCTaGTTGGGACACTGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQGISHA*LGHWDP Trigger: AGGGTCCCAGTGTCCCAACCAGGCATGGCTGATCCC...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAACTGGGGTGTCCTGTTaGTACTGTACCTCCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGTGVSC*YCTSQS Trigger: GGACTGGGAGGTACAGTACCAACAGGACACCCCAGT...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCCAGTCCCAGGAGGTCTaGGGAGAACCTGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGQSQEV*GEPVLG Trigger: ACCCAGGACAGGTTCTCCCCAGACCTCCTGGGACTG...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGCAGCCCAAGCTTCTTaGCCACATACACCGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGAAQAS*PHTPCP Trigger: TGGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGC...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCGCAGCCCAAGCTTCTTaGCCACATACACCGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRAAQAS*PHTPCP Trigger: TGGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGC...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCCTGCGCAGCTGCCACTaGCATAGTCAGGTACATGCG | + |
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Preference number: 4 (lower is better) Translates to: AVGDMSTLARKEGAGLEGLRSCH*HSQVHA Trigger: CGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAG...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCACTGGGGTGTCCTGTTaGTACTGTACCTCCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRTGVSC*YCTSQS Trigger: GGACTGGGAGGTACAGTACCAACAGGACACCCCAGT...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAACTGGGGTGTCCTGTTaGTACTGTACCTCCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGTGVSC*YCTSQS Trigger: GGACTGGGAGGTACAGTACCAACAGGACACCCCAGT...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGAGACTGAGCAGGATTaGTACGACTTCCAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRGPGGREPWSSEMSVGETEQD*YDFQSQ Trigger: CTGACTCTGGAAGTCGTAGCAATCCTGCTCAGTCTC...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | CCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCGAGACTGAGCAGGATTaGTACGACTTCCAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPLPSALCRSEVEAAPSETEQD*YDFQSQ Trigger: CTGACTCTGGAAGTCGTAGCAATCCTGCTCAGTCTC...GCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGATGAAAGCCATGGCTaGAATGTAGAGGTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGPGGREPWSSEMSVGADESHG*NVEVWS Trigger: GCTCCAGACCTCTACATTCCAGCCATGGCTTTCATC...AGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCCGATGAAAGCCATGGCTaGAATGTAGAGGTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFRSPAPSAGQKWRLRRADESHG*NVEVWS Trigger: GCTCCAGACCTCTACATTCCAGCCATGGCTTTCATC...GGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR TCA 90 bp | GCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGAGCCCATCAGGGCAGTGTCCGGATCATaGATACAAAGATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: APQRPLPVRSGGCAEPIRAVSGS*IQRWTH Trigger: GTGTGTCCATCTTTGTATTCATGATCCGGACACTGC...CCTGATGGGCTCGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | CAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGTGGAATGTAGAGGTCTaGAGCATTGATGTCGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPFPLPSALCRSEVEAAPWNVEV*SIDVEA Trigger: CGCTTCGACATCAATGCTCCAGACCTCTACATTCCA...CGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGGATGAAAGCCATGGCTaGAATGTAGAGGTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGDESHG*NVEVWS Trigger: GCTCCAGACCTCTACATTCCAGCCATGGCTTTCATC...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCGCAGTGTCCGGATCATaGATACAAAGATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRAVSGS*IQRWTH Trigger: GTGTGTCCATCTTTGTATTCATGATCCGGACACTGC...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGAGACTGAGCAGGATTaGTACGACTTCCAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQETEQD*YDFQSQ Trigger: CTGACTCTGGAAGTCGTAGCAATCCTGCTCAGTCTC...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGTGGAATGTAGAGGTCTaGAGCATTGATGTCGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGWNVEV*SIDVEA Trigger: CGCTTCGACATCAATGCTCCAGACCTCTACATTCCA...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCCGCTGGAATGTAGAGGTCTaGAGCATTGATGTCGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGALVKRDECGSWRPGRWNVEV*SIDVEA Trigger: CGCTTCGACATCAATGCTCCAGACCTCTACATTCCA...GCGGCCTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGGCAGTGTCCGGATCATaGATACAAAGATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQAVSGS*IQRWTH Trigger: GTGTGTCCATCTTTGTATTCATGATCCGGACACTGC...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAGGCCAGTGGAATGTAGAGGTCTaGAGCATTGATGTCGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGGREPWSSEMSVGAGGQWNVEV*SIDVEA Trigger: CGCTTCGACATCAATGCTCCAGACCTCTACATTCCA...CTGGCCTCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | CAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGTGGAGGCTGCGCCGATACACCGTGTCCACTaGAAAGTAATACTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPFPLPSALCRSEVEAAPIHRVH*KVILEL Trigger: AAGCTCAAGTATTACTTTGCAGTGGACACGGTGTAT...CGGCGCAGCCTCCACTTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108237.2 ENSMUST00000142519.3 |
||
| CDS-3UTR GCA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAATACACCGTGTCCACTaGAAAGTAATACTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGPGGREPWSSEMSVGAGIHRVH*KVILEL Trigger: AAGCTCAAGTATTACTTTGCAGTGGACACGGTGTAT...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGATACACCGTGTCCACTaGAAAGTAATACTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGDMSTLARKEGAGLEGGIHRVH*KVILEL Trigger: AAGCTCAAGTATTACTTTGCAGTGGACACGGTGTAT...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR GCA 90 bp | GACTTATTAAACTTGCAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGGCATCCCTGGGCTGTaGACACCTAGAAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLNLQPFPLPSALCRSEGIPGL*TPRNSR Trigger: CCTGGAGTTTCTAGGTGTGCACAGCCCAGGGATGCC...TTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTGCAAGTTTAATAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
||
| CDS-3UTR TCA 90 bp | GACTTATTAAACTTGCAGCCCTTTCCGCTCCCCAGCGCCCTCTGCCGGTCAGAAGCAGTGTCCGGATCATaGATACAAAGATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLLNLQPFPLPSALCRSEAVSGS*IQRWTH Trigger: GTGTGTCCATCTTTGTATTCATGATCCGGACACTGC...TTCTGACCGGCAGAGGGCGCTGGGGAGCGGAAAGGGCTGCAAGTTTAATAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
||
| CDS CCA 90 bp | ACCGGCTGCGCAGCTGCCACTGCCATAGTCAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACTGGCACTCCTTCGGCCGCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGCAAATAIVRYMRS*FRAPRTGTPSAAAW Trigger: CCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CCA 90 bp | AGGCTAGAAACTCCAGGTCCGGGATCTCGTGACCTCCGTCCGACCTaGAGTGACCTCGCCAACCGCCGCGACGGCCCCGCCACACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLETPGPGSRDLRPT*SDLANRRDGPATPL Trigger: GAGGGGTGTGGCGGGGCCGTCGCGGCGGTTGGCGAGGTCACTCCAGGTCGGACGGAGGTCACGAGATCCCGGACCTGGAGTTTCTAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138128.3 |
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| CDS GCA 90 bp | GCGCAGCTGGTTCCGCGCCCCACGCACTGGCACTCCTTCGGCCGCTaGCTGGGCCAGGATCTTGAGCCGCAGTGTCCGGATCATGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: AQLVPRPTHWHSFGR*LGQDLEPQCPDHEY Trigger: GTATTCATGATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAACCAGCTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CCA 90 bp | TGCCATAGTCAGGTACATGCGCAGCTGGTTCCGCGCCCCACGCACTaGCACTCCTTCGGCCGCTGCCTGGGCCAGGATCTTGAGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHSQVHAQLVPRPTH*HSFGRCLGQDLEPQ Trigger: CTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCTGACTATGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CAA 90 bp | GGAGGGCGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAAGCAGCCCAAGCTTCTaGCCCACATACACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGRGPGGREPWSSEMSVGSSPSF*PTYTVS Trigger: GGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGCT...TCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCGCCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CAA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGAAGCAGCCCAAGCTTCTaGCCCACATACACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPGGREPWSSEMSVGAGSSPSF*PTYTVS Trigger: GGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGCT...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CAA 90 bp | GTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCGGGAGCAGCCCAAGCTTCTaGCCCACATACACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGDMSTLARKEGAGLEGGSSPSF*PTYTVS Trigger: GGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGCT...CCCGCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CAA 90 bp | CGCGGGCCTGGAGGGCGGGAGCCCTGGTCAAGCGAGATGAGTGTGGGAGCTGGACACTGGGGTGTCCTGTaGGTACTGTACCTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGPGGREPWSSEMSVGAGHWGVL*VLYLPV Trigger: GACTGGGAGGTACAGTACCAACAGGACACCCCAGTG...TCCAGCTCCCACACTCATCTCGCTTGACCAGGGCTCCCGCCCTCCAGGCCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS-3UTR CAA 90 bp | GCAGTAGGCGACATGAGCACCTTGGCTAGGAAGGAGGGCGCGGGCCTGGAGGGCAGCAGCCCAAGCTTCTaGCCCACATACACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGDMSTLARKEGAGLEGSSPSF*PTYTVS Trigger: GGACACGGTGTATGTGGGCAAGAAGCTTGGGCTGCT...GCCCTCCAGGCCCGCGCCCTCCTTCCTAGCCAAGGTGCTCATGTCGCCTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS GCA 90 bp | GTGGAAGGTGAGCCAGTACATGAGTACCGGCTGCGCAGCTGCCACTaGCATAGTCAGGTACATGCGCAGCTGGTTCCGCGCCCCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEGEPVHEYRLRSCH*HSQVHAQLVPRPTH Trigger: GTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGTACTCATGTACTGGCTCACCTTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CCA 90 bp | AGCTGGTTCCGCGCCCCACGCACTGGCACTCCTTCGGCCGCTGCCTaGGCCAGGATCTTGAGCCGCAGTGTCCGGATCATGAATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWFRAPRTGTPSAAA*ARILSRSVRIMNTK Trigger: CTTTGTATTCATGATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAACCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS TCA 90 bp | ACTGAGCAGGATTGCTACGACTTCCAGAGTCAGCCAGGCCAGAGCTaGGCTCGCCTGCAGTCCCAGGAGGTCTGGGGAGAACCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TEQDCYDFQSQPGQS*ARLQSQEVWGEPVL Trigger: CAGGACAGGTTCTCCCCAGACCTCCTGGGACTGCAGGCGAGCTCAGCTCTGGCCTGGCTGACTCTGGAAGTCGTAGCAATCCTGCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000138128.3 ENSMUST00000142519.3 |
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| CDS GCA 90 bp | TACAAGGTGGAAGGTGAGCCAGTACATGAGTACCGGCTGCGCAGCTaGCACTGCCATAGTCAGGTACATGCGCAGCTGGTTCCGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YKVEGEPVHEYRLRS*HCHSQVHAQLVPRP Trigger: GGGGCGCGGAACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGTACTCATGTACTGGCTCACCTTCCACCTTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS TCA 90 bp | AGGCAAGCACCAGGTAGTAGCCGATCTTTCCAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCCTGTCCTGGGTCCCCAGTGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQAPGSSRSFQRADP*GRRQSSCPGSPVQG Trigger: GCCTTGCACTGGGGACCCAGGACAGGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTGGAAAGATCGGCTACTACCTGGTGCTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108237.2 |
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| CDS CCA 72 bp | ACTCCAGGTCCGGGATCTCGTGACCTCCGTCCGACCTaGAGTGACCTCGCCAACCGCCGCGACGGCCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPGPGSRDLRPT*SDLANRRDGPA Trigger: GGCGGGGCCGTCGCGGCGGTTGGCGAGGTCACTCCAGGTCGGACGGAGGTCACGAGATCCCGGACCTGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138128.3 |
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| CDS CAA 72 bp | CAGCCATGCCTGGTTGGGACACTGGGACCCTCCGCTTaGAGGGCCACTTACGCAGCCGGGGCGTCCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QPCLVGTLGPSA*RATYAAGASPP Trigger: CGGCGGGGACGCCCCGGCTGCGTAAGTGGCCCTCAAAGCGGAGGGTCCCAGTGTCCCAACCAGGCATGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032809.10 |
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| CDS GCA 72 bp | GTTCCGCGCCCCACGCACTGGCACTCCTTCGGCCGCTaGCTGGGCCAGGATCTTGAGCCGCAGTGTCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPRPTHWHSFGR*LGQDLEPQCPD Trigger: ATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CCA 72 bp | CGCGCCCCACGCACTGGCACTCCTTCGGCCGCTGCCTaGGCCAGGATCTTGAGCCGCAGTGTCCGGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: RAPRTGTPSAAA*ARILSRSVRIM Trigger: CATGATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CCA 72 bp | GCAGCTGCCACTGCCATAGTCAGGTACATGCGCAGCTaGTTCCGCGCCCCACGCACTGGCACTCCTTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAATAIVRYMRS*FRAPRTGTPSA Trigger: GGCCGAAGGAGTGCCAGTGCGTGGGGCGCGGAACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS TCA 72 bp | AGCCATGCCTGGTTGGGACACTGGGACCCTCCGCTTTaGGGCCGGACTTGGCATCCCTGGGCTGTGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: SHAWLGHWDPPL*GRTWHPWAVHT Trigger: GGTGTGCACAGCCCAGGGATGCCAAGTCCGGCCTCAAAGCGGAGGGTCCCAGTGTCCCAACCAGGCATGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
||
| CDS CAA 72 bp | CAGCCATGCCTGGTTGGGACACTGGGACCCTCCGCTTaGAGGCCGGACTTGGCATCCCTGGGCTGTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: QPCLVGTLGPSA*RPDLASLGCAH Trigger: GTGTGCACAGCCCAGGGATGCCAAGTCCGGCCTCAAAGCGGAGGGTCCCAGTGTCCCAACCAGGCATGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
||
| CDS CAA 90 bp | GGTGGGGATCAGCCATGCCTGGTTGGGACACTGGGACCCTCCGCTTaGAGGCCGGACTTGGCATCCCTGGGCTGTGCACACCTAGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GGDQPCLVGTLGPSA*RPDLASLGCAHLET Trigger: AGTTTCTAGGTGTGCACAGCCCAGGGATGCCAAGTCCGGCCTCAAAGCGGAGGGTCCCAGTGTCCCAACCAGGCATGGCTGATCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142519.3 |
||
| CDS GCA 72 bp | GAGCCAGTACATGAGTACCGGCTGCGCAGCTGCCACTaGCATAGTCAGGTACATGCGCAGCTGGTTCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPVHEYRLRSCH*HSQVHAQLVPR Trigger: GCGCGGAACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGTACTCATGTACTGGCTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS CAA 90 bp | GCCCCACGCACTGGCACTCCTTCGGCCGCTGCCTGGGCCAGGATCTaGAGCCGCAGTGTCCGGATCATGAATACAAAGATGGACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: APRTGTPSAAAWARI*SRSVRIMNTKMDTQ Trigger: CTGTGTGTCCATCTTTGTATTCATGATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGTGCGTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
||
| CDS TCA 72 bp | GATTGCTACGACTTCCAGAGTCAGCCAGGCCAGAGCTaGGCTCGCCTGCAGTCCCAGGAGGTCTGGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DCYDFQSQPGQS*ARLQSQEVWGE Trigger: TTCTCCCCAGACCTCCTGGGACTGCAGGCGAGCTCAGCTCTGGCCTGGCTGACTCTGGAAGTCGTAGCAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000138128.3 ENSMUST00000142519.3 |
||
| CDS TCA 72 bp | CCAGGTAGTAGCCGATCTTTCCAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCCTGTCCTGGGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PGSSRSFQRADP*GRRQSSCPGSP Trigger: TGGGGACCCAGGACAGGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTGGAAAGATCGGCTACTACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108237.2 |
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| CDS GCA 72 bp | GAAGGTGAGCCAGTACATGAGTACCGGCTGCGCAGCTaGCACTGCCATAGTCAGGTACATGCGCAGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: EGEPVHEYRLRS*HCHSQVHAQLV Trigger: AACCAGCTGCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGTACTCATGTACTGGCTCACCTTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS GCA 72 bp | ACAAGGTGGAAGGTGAGCCAGTACATGAGTACCGGCTaGGCAGCTGCCACTGCCATAGTCAGGTACATGCGC | + |
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Preference number: 6 (lower is better) Translates to: TRWKVSQYMSTG*AAATAIVRYMR Trigger: GCGCATGTACCTGACTATGGCAGTGGCAGCTGCGCAGCCGGTACTCATGTACTGGCTCACCTTCCACCTTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS CAA 72 bp | ACTGGCACTCCTTCGGCCGCTGCCTGGGCCAGGATCTaGAGCCGCAGTGTCCGGATCATGAATACAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TGTPSAAAWARI*SRSVRIMNTKM Trigger: CATCTTTGTATTCATGATCCGGACACTGCGGCTCAAGATCCTGGCCCAGGCAGCGGCCGAAGGAGTGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000142519.3 |
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| CDS TCA 72 bp | CCAGGTAGTAGCCGATCTTTCCAAAGAGCAGACCCGTaGGGACGCCGCCAATCATCCCCACATATTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PGSSRSFQRADP*GRRQSSPHICS Trigger: GCTACAAATATGTGGGGATGATTGGCGGCGTCCTCACGGGTCTGCTCTTTGGAAAGATCGGCTACTACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032809.10 ENSMUST00000108238.8 ENSMUST00000138128.3 ENSMUST00000142519.3 |
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| CDS GCA 72 bp | CAGCCCAAGCTTCTTGCCCACATACACCGTGTCCACTaGAAAGTAATACTTGAGCTTGCTGACGGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: QPKLLAHIHRVH*KVILELADGDE Trigger: TTCATCCCCGTCAGCAAGCTCAAGTATTACTTTGCAGTGGACACGGTGTATGTGGGCAAGAAGCTTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032809.10 ENSMUST00000108237.2 ENSMUST00000108238.8 ENSMUST00000138128.3 ENSMUST00000142519.3 |
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