Pregenerated sensors for YIF1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024875Ensembl transcript IDs: ENSMUST00000025811.6, ENSMUST00000236687.2, ENSMUST00000237025.2, ENSMUST00000237603.2, ENSMUST00000238093.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTaGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAGGCAGCTGCT | + |
Preference number: 1 (lower is better) Translates to: WKNECHLRTRDHRTR*KVSQYMMRGWKAAA Trigger: AGCAGCTGCCTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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3UTR TCA 90 bp | TCGAGGATGCTCTCCCAGAATCCGCTTACCCTTCTCTTAGAAGCCTaGAGCCTAGTCCCCTGGGCAAAGCAGATACCTATGGCTTCCCCT | + |
Preference number: 1 (lower is better) Translates to: SRMLSQNPLTLLLEA*SLVPWAKQIPMASP Trigger: AGGGGAAGCCATAGGTATCTGCTTTGCCCAGGGGACTAGGCTTCAGGCTTCTAAGAGAAGGGTAAGCGGATTCTGGGAGAGCATCCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR TCA 90 bp | AGCTGCAGTCCGCAAAGATCGTACAATGAAGTACATAAGCGCAGATaGTGTCCAGGCCAGGGCCACGTAGTAGCCATCACTGCCGAAGAG | + |
Preference number: 1 (lower is better) Translates to: SCSPQRSYNEVHKRR*CPGQGHVVAITAEE Trigger: CTCTTCGGCAGTGATGGCTACTACGTGGCCCTGGCCTGGACATCATCTGCGCTTATGTACTTCATTGTACGATCTTTGCGGACTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR CCA 90 bp | TTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTaGAAGTCTCCTTGTAGCCACCCTTCCATCTTCCCTTTCCAGCTG | + |
Preference number: 1 (lower is better) Translates to: LLWAFLEPSRMNLKP*KSPCSHPSIFPFQL Trigger: CAGCTGGAAAGGGAAGATGGAAGGGTGGCTACAAGGAGACTTCCAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR GCA 90 bp | GTCCGATGCGACCCTTCCAGCTGTTTTTCAAAGCAGTATAAAAGATaGCTCGAGGATGCTCTCCCAGAATCCGCTTACCCTTCTCTTAGA | + |
Preference number: 1 (lower is better) Translates to: VRCDPSSCFSKQYKR*LEDALPESAYPSLR Trigger: TCTAAGAGAAGGGTAAGCGGATTCTGGGAGAGCATCCTCGAGGCATCTTTTATACTGCTTTGAAAAACAGCTGGAAGGGTCGCATCGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR-3UTR TCA 90 bp | GGCAGCTGCTCCCAGGGTCAGGTAGAGCTGGAGACGCTGCCGAGGGGCTGGGCCGAGCCAACACCTCCATaGACACCCACACCAGTGCTG | + |
Preference number: 2 (lower is better) Translates to: GSCSQGQVELETLPRGWAEPTPP*TPTPVL Trigger: CAGCACTGGTGTGGGTGTTCATGGAGGTGTTGGCTC...GGCCCAGCCCCTCGGCAGCGTCTCCAGCTCTACCTGACCCTGGGAGCAGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR-3UTR TCA 90 bp | AAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGGTCAGCGTACATAAGCGCAGATaGTGTCCAGGCCAGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: KNECHLRTRDHRTRWKVSVHKRR*CPGQGH Trigger: GTGGCCCTGGCCTGGACATCATCTGCGCTTATGTAC...GCTGACCTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR-3UTR TCA 90 bp | GCCCTACTTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTGCTTCTCTTAGAAGCCTaGAGCCTAGTCCCCTGGGCA | + |
Preference number: 2 (lower is better) Translates to: ALLALGFSGTLSDESEALLLLEA*SLVPWA Trigger: TGCCCAGGGGACTAGGCTTCAGGCTTCTAAGAGAAG...CAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAAGTAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR-3UTR GCA 90 bp | GAAGCTGCAGTCCGCAAAGATCGTACAATGAAGTACATAAGCGCAGATGATGTCCACCAGTGCTGTGCTTaGACACAGGCCCAACACCTC | + |
Preference number: 2 (lower is better) Translates to: EAAVRKDRTMKYISADDVHQCCA*TQAQHL Trigger: GAGGTGTTGGGCCTGTGTGCAAGCACAGCACTGGTG...GACATCATCTGCGCTTATGTACTTCATTGTACGATCTTTGCGGACTGCAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR-3UTR GCA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCCAGCACTGTGAGCCTTaGCCTACTTGCTCTGGGCTT | + |
Preference number: 2 (lower is better) Translates to: SPNSASGRLEHIGLGGIFQHCEP*PTCSGL Trigger: AAGCCCAGAGCAAGTAGGGCAAGGCTCACAGTGCTG...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR TCA 72 bp | CCAGGTAGAGGCCCAGAAGCAGAGCCAACACCTCCATaGACACCCACACCAGTGCTGTGCTTGCACACAGGC | + |
Preference number: 3 (lower is better) Translates to: PGRGPEAEPTPP*TPTPVLCLHTG Trigger: GCCTGTGTGCAAGCACAGCACTGGTGTGGGTGTTCATGGAGGTGTTGGCTCTGCTTCTGGGCCTCTACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR GCA 72 bp | CGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTaGGTACGGTGGCCAGGTAGAGGCCCAGAAGCAGAG | + |
Preference number: 3 (lower is better) Translates to: RCKPRGGRYSVH*VRWPGRGPEAE Trigger: CTCTGCTTCTGGGCCTCTACCTGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR CCA 72 bp | GAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTaGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAG | + |
Preference number: 3 (lower is better) Translates to: ECHLRTRDHRTR*KVSQYMMRGWK Trigger: CTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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3UTR GCA 72 bp | CAACACCTCCATGAACACCCACACCAGTGCTGTGCTTaGACACAGGCCCAACACCTCTGGGGAGAACCTTTG | + |
Preference number: 3 (lower is better) Translates to: QHLHEHPHQCCA*TQAQHLWGEPL Trigger: CAAAGGTTCTCCCCAGAGGTGTTGGGCCTGTGTGCAAGCACAGCACTGGTGTGGGTGTTCATGGAGGTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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3UTR TCA 72 bp | CTCTCCCAGAATCCGCTTACCCTTCTCTTAGAAGCCTaGAGCCTAGTCCCCTGGGCAAAGCAGATACCTATG | + |
Preference number: 3 (lower is better) Translates to: LSQNPLTLLLEA*SLVPWAKQIPM Trigger: CATAGGTATCTGCTTTGCCCAGGGGACTAGGCTTCAGGCTTCTAAGAGAAGGGTAAGCGGATTCTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR CCA 72 bp | GCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTaGAAGTCTCCTTGTAGCCACCCTTCCATCTTCCCT | + |
Preference number: 3 (lower is better) Translates to: AFLEPSRMNLKP*KSPCSHPSIFP Trigger: AGGGAAGATGGAAGGGTGGCTACAAGGAGACTTCCAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR GCA 72 bp | GCCACCCTTCCATCTTCCCTTTCCAGCTGTGTCCGATaGGACCCTTCCAGCTGTTTTTCAAAGCAGTATAAA | + |
Preference number: 3 (lower is better) Translates to: ATLPSSLSSCVR*DPSSCFSKQYK Trigger: TTTATACTGCTTTGAAAAACAGCTGGAAGGGTCGCATCGGACACAGCTGGAAAGGGAAGATGGAAGGGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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3UTR GCA 72 bp | GACCCTTCCAGCTGTTTTTCAAAGCAGTATAAAAGATaGCTCGAGGATGCTCTCCCAGAATCCGCTTACCCT | + |
Preference number: 3 (lower is better) Translates to: DPSSCFSKQYKR*LEDALPESAYP Trigger: AGGGTAAGCGGATTCTGGGAGAGCATCCTCGAGGCATCTTTTATACTGCTTTGAAAAACAGCTGGAAGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | CTAGTCCCCTGGGCAAAGCAGATACCTATGGCTTCCCCTCAGGTCCCAGGAACCGGCTACATCAGCTCCTaGGGCTGGGTATCCGCCCAG | + |
Preference number: 4 (lower is better) Translates to: LVPWAKQIPMASPQVPGTGYISS*GWVSAQ Trigger: CTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCC...GGTTCCTGGGACCTGAGGGGAAGCCATAGGTATCTGCTTTGCCCAGGGGACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | CTAGTCCCCTGGGCAAAGCAGATACCTATGGCTTCCCCTCAGGTCCCAGGAACCGAACACCCACACCAGTaGTGTGCTTGCACACAGGCC | + |
Preference number: 4 (lower is better) Translates to: LVPWAKQIPMASPQVPGTEHPHQ*CACTQA Trigger: GGCCTGTGTGCAAGCACAGCACTGGTGTGGGTGTTC...GGTTCCTGGGACCTGAGGGGAAGCCATAGGTATCTGCTTTGCCCAGGGGACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | CAGGTGGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAGGCAGCTGCTCCCAGGAACACCCACACCAGTaGTGTGCTTGCACACAGGCC | + |
Preference number: 4 (lower is better) Translates to: QVEGQPVYDEGLEGSCSQEHPHQ*CACTQA Trigger: GGCCTGTGTGCAAGCACAGCACTGGTGTGGGTGTTC...CTGGGAGCAGCTGCCTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | CAGGTGGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAGGCAGCTGCTCCCAGGTTCACTGCGTACGGTaGCCAGGTAGAGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: QVEGQPVYDEGLEGSCSQVHCVR*PGRGPE Trigger: TTCTGGGCCTCTACCTGGCCACCGTACGCAGTGAAC...CTGGGAGCAGCTGCCTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR GCA 90 bp | CAGGTGGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAGGCAGCTGCTCCCAGGGTGCCATAGGCCATTaGCATATTGGCCACTGGGTC | + |
Preference number: 4 (lower is better) Translates to: QVEGQPVYDEGLEGSCSQGAIGH*HIGHWV Trigger: GACCCAGTGGCCAATATGGCAATGGCCTATGGCACC...CTGGGAGCAGCTGCCTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | TGTAACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGGAGTGGAGGAGGGTCTaGAGCTGCCCGGGTCCTATG | + |
Preference number: 4 (lower is better) Translates to: CNRCKPRGGRYSVHCVRWEWRRV*SCPGPM Trigger: CATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTC...CCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | GTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGGGCTACATCAGCTCCTaGGGCTGGGTATCCGCCCAG | + |
Preference number: 4 (lower is better) Translates to: VWKNECHLRTRDHRTRWKGYISS*GWVSAQ Trigger: CTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCC...CTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR TCA 90 bp | CCCTCTCGGATGAATCTGAAGCCTTGGAAGTCTCCTTGTAGCCACCCTTCCATCAGAGGTCAGGGGCATTaGGATCTTTCCGCGGGGGCA | + |
Preference number: 4 (lower is better) Translates to: PSRMNLKPWKSPCSHPSIRGQGH*DLSAGA Trigger: TGCCCCCGCGGAAAGATCTCAATGCCCCTGACCTCT...GATGGAAGGGTGGCTACAAGGAGACTTCCAAGGCTTCAGATTCATCCGAGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | CTTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTGGAAGTCGAGTGGAGGAGGGTCTaGAGCTGCCCGGGTCCTATG | + |
Preference number: 4 (lower is better) Translates to: LALGFSGTLSDESEALEVEWRRV*SCPGPM Trigger: CATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTC...GACTTCCAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | AATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGGGCTACATCAGCTCCTaGGGCTGGGTATCCGCCCAG | + |
Preference number: 4 (lower is better) Translates to: NVWKNECHLRTRDHRTRWGYISS*GWVSAQ Trigger: CTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCC...CCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR TCA 90 bp | AATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAGAGGTCAGGGGCATTaGGATCTTTCCGCGGGGGCA | + |
Preference number: 4 (lower is better) Translates to: NVWKNECHLRTRDHRTRWRGQGH*DLSAGA Trigger: TGCCCCCGCGGAAAGATCTCAATGCCCCTGACCTCT...CCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR TCA 90 bp | TACCTATGGCTTCCCCTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAGAGCCAACACCTCCATaGACACCCACACCAGTGCTG | + |
Preference number: 4 (lower is better) Translates to: YLWLPLRSQEPGSSQVKEEPTPP*TPTPVL Trigger: CAGCACTGGTGTGGGTGTTCATGGAGGTGTTGGCTC...TTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAGGGGAAGCCATAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | AGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCAGGTAGAGGCCCAGAACGGTGCAGCTCTTTGTaGACTATGTCCTTCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: RGGRYSVHCVRWPGRGPERCSSL*TMSFPW Trigger: CCAAGGGAAGGACATAGTGCACAAAGAGCTGCACCG...TTCTGGGCCTCTACCTGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR GCA 90 bp | GCCCTACTTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTGCACCAGTGCTGTGCTTaGACACAGGCCCAACACCTC | + |
Preference number: 4 (lower is better) Translates to: ALLALGFSGTLSDESEALHQCCA*TQAQHL Trigger: GAGGTGTTGGGCCTGTGTGCAAGCACAGCACTGGTG...CAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAAGTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | AACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCACCCGGGTCCTATGCTTaGAACCGTGGACTCCATATG | + |
Preference number: 4 (lower is better) Translates to: NRCKPRGGRYSVHCVRWPPGSYA*NRGLHM Trigger: CATATGGAGTCCACGGTTCCAAGCATAGGACCCGGG...TGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | AAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGGTCAGCCCCGGGTCCTATGCTTaGAACCGTGGACTCCATATG | + |
Preference number: 4 (lower is better) Translates to: KNECHLRTRDHRTRWKVSPGSYA*NRGLHM Trigger: CATATGGAGTCCACGGTTCCAAGCATAGGACCCGGG...GCTGACCTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | CAGGTGGAAGGTCAGCCAGTATATGATGAGGGGCTGGAAGGCAGCTGCTCCCAGACTATGTCCTTCCCTTaGGATGCTATGGAGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: QVEGQPVYDEGLEGSCSQTMSFP*DAMEVP Trigger: TGGCACCTCCATAGCATCCCAAGGGAAGGACATAGT...CTGGGAGCAGCTGCCTTCCAGCCCCTCATCATATACTGGCTGACCTTCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | TACCTATGGCTTCCCCTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAGTTCACTGCGTACGGTaGCCAGGTAGAGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: YLWLPLRSQEPGSSQVKEVHCVR*PGRGPE Trigger: TTCTGGGCCTCTACCTGGCCACCGTACGCAGTGAAC...TTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAGGGGAAGCCATAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | CCCTCTCGGATGAATCTGAAGCCTTGGAAGTCTCCTTGTAGCCACCCTTCCATCGGTGCCATAGGCCATTaGCATATTGGCCACTGGGTC | + |
Preference number: 4 (lower is better) Translates to: PSRMNLKPWKSPCSHPSIGAIGH*HIGHWV Trigger: GACCCAGTGGCCAATATGGCAATGGCCTATGGCACC...GATGGAAGGGTGGCTACAAGGAGACTTCCAAGGCTTCAGATTCATCCGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | TACCTATGGCTTCCCCTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAACCCGGGTCCTATGCTTaGAACCGTGGACTCCATATG | + |
Preference number: 4 (lower is better) Translates to: YLWLPLRSQEPGSSQVKEPGSYA*NRGLHM Trigger: CATATGGAGTCCACGGTTCCAAGCATAGGACCCGGG...TTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAGGGGAAGCCATAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | AACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCATCCCTTGGGATGCTATaGAGGTGCCATAGGCCATTG | + |
Preference number: 4 (lower is better) Translates to: NRCKPRGGRYSVHCVRWPSLGML*RCHRPL Trigger: CAATGGCCTATGGCACCTCCATAGCATCCCAAGGGA...TGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | AGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCAGGTAGAGGCCCAGAAACTATGTCCTTCCCTTaGGATGCTATGGAGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: RGGRYSVHCVRWPGRGPETMSFP*DAMEVP Trigger: TGGCACCTCCATAGCATCCCAAGGGAAGGACATAGT...TTCTGGGCCTCTACCTGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | TGTAACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGC | + |
Preference number: 4 (lower is better) Translates to: CNRCKPRGGRYSVHCVRWCIIEE*RRVWSC Trigger: GCAGCTCCAGACCCTCCTCCACTCTTCGATGATACA...CCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | GTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGC | + |
Preference number: 4 (lower is better) Translates to: VWKNECHLRTRDHRTRWKCIIEE*RRVWSC Trigger: GCAGCTCCAGACCCTCCTCCACTCTTCGATGATACA...CTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | ACCTATGGCTTCCCCTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAATCCCTTGGGATGCTATaGAGGTGCCATAGGCCATTG | + |
Preference number: 4 (lower is better) Translates to: TYGFPSGPRNQGQAKLRKSLGML*RCHRPL Trigger: CAATGGCCTATGGCACCTCCATAGCATCCCAAGGGA...TTTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAGGGGAAGCCATAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR TCA 90 bp | CTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAACCAAATCTTCAATGGTACATAAGCGCAGATaGTGTCCAGGCCAGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: LRSQEPGSSQVKETKSSMVHKRR*CPGQGH Trigger: GTGGCCCTGGCCTGGACATCATCTGCGCTTATGTAC...CATTGAAGATTTGGTTTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | AACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCAACGGACACAAAACGGTaGAGCTCTTTGTGCACTATG | + |
Preference number: 4 (lower is better) Translates to: NRCKPRGGRYSVHCVRWPTDTKR*SSLCTM Trigger: CATAGTGCACAAAGAGCTGCACCGTTTTGTGTCCGT...TGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CCA 90 bp | AACCGCTGTAAGCCAAGAGGTGGAAGGTACTCAGTTCACTGCGTACGGTGGCCAATCCGCCCAGTTGGCTaGAATAACCACCACTTGTAT | + |
Preference number: 4 (lower is better) Translates to: NRCKPRGGRYSVHCVRWPIRPVG*NNHHLY Trigger: ATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGAT...TGGCCACCGTACGCAGTGAACTGAGTACCTTCCACCTCTTGGCTTACAGCGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR GCA 90 bp | TTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGAGGTACTCAGTTCACTaGGTACGGTGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: FNVWKNECHLRTRDHRTRRYSVH*VRWPGR Trigger: TCTACCTGGCCACCGTACGCAGTGAACTGAGTACCT...CCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR GCA 90 bp | CAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGGGTGCCATAGGCCATTaGCATATTGGCCACTGGGTC | + |
Preference number: 4 (lower is better) Translates to: QIFNVWKNECHLRTRDHRGAIGH*HIGHWV Trigger: GACCCAGTGGCCAATATGGCAATGGCCTATGGCACC...CCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | CTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAACCAAATCTTCAATGTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LRSQEPGSSQVKETKSSMCIIEE*RRVWSC Trigger: GCAGCTCCAGACCCTCCTCCACTCTTCGATGATACA...CATTGAAGATTTGGTTTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR TCA 90 bp | CTTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTGGAAGTCTGCATTTTCCAGTTCTaGTGTGTGTATGGGAAGACC | + |
Preference number: 4 (lower is better) Translates to: LALGFSGTLSDESEALEVCIFQF*CVYGKT Trigger: GGTCTTCCCATACACACATCAGAACTGGAAAATGCA...GACTTCCAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCCGGTGCAGCTCTTTGTaGACTATGTCCTTCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: SPNSASGRLEHIGLGGIFRCSSL*TMSFPW Trigger: CCAAGGGAAGGACATAGTGCACAAAGAGCTGCACCG...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | AACCAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCACCAGTGCTGTGCTTaGACACAGGCCCAACACCTC | + |
Preference number: 4 (lower is better) Translates to: NQIFNVWKNECHLRTRDHHQCCA*TQAQHL Trigger: GAGGTGTTGGGCCTGTGTGCAAGCACAGCACTGGTG...GTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR GCA 90 bp | ATAAAAGATGCCTCGAGGATGCTCTCCCAGAATCCGCTTACCCTTCTCTTAGAAAGGTACTCAGTTCACTaGGTACGGTGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: IKDASRMLSQNPLTLLLERYSVH*VRWPGR Trigger: TCTACCTGGCCACCGTACGCAGTGAACTGAGTACCT...TTCTAAGAGAAGGGTAAGCGGATTCTGGGAGAGCATCCTCGAGGCATCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | CAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGTCCCTTGGGATGCTATaGAGGTGCCATAGGCCATTG | + |
Preference number: 4 (lower is better) Translates to: QIFNVWKNECHLRTRDHRSLGML*RCHRPL Trigger: CAATGGCCTATGGCACCTCCATAGCATCCCAAGGGA...CCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR TCA 90 bp | TTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGCATTTTCCAGTTCTaGTGTGTGTATGGGAAGACC | + |
Preference number: 4 (lower is better) Translates to: FNVWKNECHLRTRDHRTRCIFQF*CVYGKT Trigger: GGTCTTCCCATACACACATCAGAACTGGAAAATGCA...CCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238093.2 |
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CDS-3UTR GCA 90 bp | CTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAACCAAATCTTCAATGACGGACACAAAACGGTaGAGCTCTTTGTGCACTATG | + |
Preference number: 4 (lower is better) Translates to: LRSQEPGSSQVKETKSSMTDTKR*SSLCTM Trigger: CATAGTGCACAAAGAGCTGCACCGTTTTGTGTCCGT...CATTGAAGATTTGGTTTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCACTATGTCCTTCCCTTaGGATGCTATGGAGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: SPNSASGRLEHIGLGGIFTMSFP*DAMEVP Trigger: TGGCACCTCCATAGCATCCCAAGGGAAGGACATAGT...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR GCA 90 bp | CAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACGGACACAAAACGGTaGAGCTCTTTGTGCACTATG | + |
Preference number: 4 (lower is better) Translates to: QIFNVWKNECHLRTRDHRTDTKR*SSLCTM Trigger: CATAGTGCACAAAGAGCTGCACCGTTTTGTGTCCGT...CCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CCA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCATCCGCCCAGTTGGCTaGAATAACCACCACTTGTAT | + |
Preference number: 4 (lower is better) Translates to: SPNSASGRLEHIGLGGIFIRPVG*NNHHLY Trigger: ATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGAT...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CCA 90 bp | CAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGATCCGCCCAGTTGGCTaGAATAACCACCACTTGTAT | + |
Preference number: 4 (lower is better) Translates to: QIFNVWKNECHLRTRDHRIRPVG*NNHHLY Trigger: ATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGAT...CCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | CAGCTGCTCCCAGGGTCAGGTAGAGCTGGAGACGCTGCCGAGGGGCTGGGCCCCTGGGTATCCGCCCAGTaGGCTGGAATAACCACCACT | + |
Preference number: 5 (lower is better) Translates to: QLLPGSGRAGDAAEGLGPWVSAQ*AGITTT Trigger: AGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCA...GGGGCCCAGCCCCTCGGCAGCGTCTCCAGCTCTACCTGACCCTGGGAGCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CAA 90 bp | CAGCTGCTCCCAGGGTCAGGTAGAGCTGGAGACGCTGCCGAGGGGCTGGGCCCCGGGTCTCCAAGCAGGTaGTTGACACTGAAGGCTACA | + |
Preference number: 5 (lower is better) Translates to: QLLPGSGRAGDAAEGLGPGSPSR*LTLKAT Trigger: TGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCC...GGGGCCCAGCCCCTCGGCAGCGTCTCCAGCTCTACCTGACCCTGGGAGCAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS-3UTR CAA 90 bp | AGGCAGCTGCTCCCAGGGTCAGGTAGAGCTGGAGACGCTGCCGAGGGGCTGGGCCACTATGTCCTTCCCTaGGGATGCTATGGAGGTGCC | + |
Preference number: 5 (lower is better) Translates to: RQLLPGSGRAGDAAEGLGHYVLP*GCYGGA Trigger: GGCACCTCCATAGCATCCCAAGGGAAGGACATAGTG...GCCCAGCCCCTCGGCAGCGTCTCCAGCTCTACCTGACCCTGGGAGCAGCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237603.2 |
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CDS CCA 90 bp | TCCGCCCAGTTGGCTGGAATAACCACCACTTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGCCCGGGTCCTATGCTTGGAACCGTG | + |
Preference number: 5 (lower is better) Translates to: SAQLAGITTTCIIEE*RRVWSCPGPMLGTV Trigger: CACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS TCA 90 bp | GCTGTGCTTGCACACAGGCCCAACACCTCTGGGGAGAACCTTTGCTaGATGCCTAGCGCCATTCCAGCCAGCAGCACGTATGTGATGAAG | + |
Preference number: 5 (lower is better) Translates to: AVLAHRPNTSGENLC*MPSAIPASSTYVMK Trigger: CTTCATCACATACGTGCTGCTGGCTGGAATGGCGCTAGGCATTCAGCAAAGGTTCTCCCCAGAGGTGTTGGGCCTGTGTGCAAGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000238093.2 |
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CDS CCA 90 bp | TCCGCCCAGTTGGCTGGAATAACCACCACTTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGCCCGGGTCCTATGCTTGGAACCCAT | + |
Preference number: 5 (lower is better) Translates to: SAQLAGITTTCIIEE*RRVWSCPGPMLGTH Trigger: ATGGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236687.2 |
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CDS TCA 90 bp | CTGCCGAAGAGCAGCCCCGTGAGCACACTAAGGATCATCCTTTGCTaGATGCCTAGCGCCATTCCAGCCAGCAGCACGTATGTGATGAAG | + |
Preference number: 5 (lower is better) Translates to: LPKSSPVSTLRIILC*MPSAIPASSTYVMK Trigger: CTTCATCACATACGTGCTGCTGGCTGGAATGGCGCTAGGCATTCAGCAAAGGATGATCCTTAGTGTGCTCACGGGGCTGCTCTTCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237025.2 |
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CDS CCA 90 bp | GCTGGAATAACCACCACTTGTATCATCGAAGAGTGGAGGAGGGTCTaGAGCTGCCCGGGTCCTATGCTTGGAACCGTGGACTCCATATGC | + |
Preference number: 5 (lower is better) Translates to: AGITTTCIIEEWRRV*SCPGPMLGTVDSIC Trigger: GCATATGGAGTCCACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS GCA 90 bp | ATAACCACCACTTGTATCATCGAAGAGTGGAGGAGGGTCTGGAGCTaGCCGGGTCCTATGCTTGGAACCGTGGACTCCATATGCCGAATG | + |
Preference number: 5 (lower is better) Translates to: ITTTCIIEEWRRVWS*PGPMLGTVDSICRM Trigger: CATTCGGCATATGGAGTCCACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS GCA 90 bp | GCAGCTCTTTGTGCACTATGTCCTTCCCTTGGGATGCTATGGAGGTaGCATAGGCCATTGCCATATTGGCCACTGGGTCTCCAAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: AALCALCPSLGMLWR*HRPLPYWPLGLQAG Trigger: ACCTGCTTGGAGACCCAGTGGCCAATATGGCAATGGCCTATGGCACCTCCATAGCATCCCAAGGGAAGGACATAGTGCACAAAGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | CTAAACCCCAGCACTGTGAGCCTTGCCCTACTTGCTCTGGGCTTTTCTGGAACCGGGTCTCCAAGCAGGTaGTTGACACTGAAGGCTACA | + |
Preference number: 5 (lower is better) Translates to: LNPSTVSLALLALGFSGTGSPSR*LTLKAT Trigger: TGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCC...GGTTCCAGAAAAGCCCAGAGCAAGTAGGGCAAGGCTCACAGTGCTGGGGTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS CCA 90 bp | TCCAAGCAGGTTGTTGACACTGAAGGCTACATCAGCTCCTGGGGCTaGGTATCCGCCCAGTTGGCTGGAATAACCACCACTTGTATCATC | + |
Preference number: 5 (lower is better) Translates to: SKQVVDTEGYISSWG*VSAQLAGITTTCII Trigger: GATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCCTTCAGTGTCAACAACCTGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 90 bp | TTGGGATGCTATGGAGGTGCCATAGGCCATTGCCATATTGGCCACTaGGTCTCCAAGCAGGTTGTTGACACTGAAGGCTACATCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: LGCYGGAIGHCHIGH*VSKQVVDTEGYISS Trigger: GGAGCTGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCCAGTGGCCAATATGGCAATGGCCTATGGCACCTCCATAGCATCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | AAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGGTCAGCTCTCCAAGCAGGTTGTaGACACTGAAGGCTACATCA | + |
Preference number: 5 (lower is better) Translates to: KNECHLRTRDHRTRWKVSSPSRL*TLKATS Trigger: TGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGA...GCTGACCTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | TTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGCACTATGTCCTTCCCTaGGGATGCTATGGAGGTGCC | + |
Preference number: 5 (lower is better) Translates to: FNVWKNECHLRTRDHRTRHYVLP*GCYGGA Trigger: GGCACCTCCATAGCATCCCAAGGGAAGGACATAGTG...CCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | CTCAGGTCCCAGGAACCAGGGTCAAGCCAAGTTAAGGAAACCAAATCTTCAATGCACTATGTCCTTCCCTaGGGATGCTATGGAGGTGCC | + |
Preference number: 5 (lower is better) Translates to: LRSQEPGSSQVKETKSSMHYVLP*GCYGGA Trigger: GGCACCTCCATAGCATCCCAAGGGAAGGACATAGTG...CATTGAAGATTTGGTTTCCTTAACTTGGCTTGACCCTGGTTCCTGGGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CAA 90 bp | GTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAAGTGGAATAACCACCACTaGTATCATCGAAGAGTGGAG | + |
Preference number: 5 (lower is better) Translates to: VWKNECHLRTRDHRTRWKWNNHH*YHRRVE Trigger: CTCCACTCTTCGATGATACAAGTGGTGGTTATTCCA...CTTCCACCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCTGGGTATCCGCCCAGTaGGCTGGAATAACCACCACT | + |
Preference number: 5 (lower is better) Translates to: SPNSASGRLEHIGLGGIFWVSAQ*AGITTT Trigger: AGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCA...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CAA 90 bp | CTTGCTCTGGGCTTTTCTGGAACCCTCTCGGATGAATCTGAAGCCTTGGAAGTCTCTCCAAGCAGGTTGTaGACACTGAAGGCTACATCA | + |
Preference number: 5 (lower is better) Translates to: LALGFSGTLSDESEALEVSPSRL*TLKATS Trigger: TGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGA...GACTTCCAAGGCTTCAGATTCATCCGAGAGGGTTCCAGAAAAGCCCAGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CAA 90 bp | CAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGGGGTCTCCAAGCAGGTaGTTGACACTGAAGGCTACA | + |
Preference number: 5 (lower is better) Translates to: QIFNVWKNECHLRTRDHRGSPSR*LTLKAT Trigger: TGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCC...CCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | TTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACCGGACCAGGTGGAATAACCACCACTaGTATCATCGAAGAGTGGAG | + |
Preference number: 5 (lower is better) Translates to: FNVWKNECHLRTRDHRTRWNNHH*YHRRVE Trigger: CTCCACTCTTCGATGATACAAGTGGTGGTTATTCCA...CCTGGTCCGGTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS-3UTR CAA 90 bp | AGCCCCAATTCTGCTTCTGGAAGGCTTGAACACATAGGGTTAGGTGGAATATTCTGGAATAACCACCACTaGTATCATCGAAGAGTGGAG | + |
Preference number: 5 (lower is better) Translates to: SPNSASGRLEHIGLGGIFWNNHH*YHRRVE Trigger: CTCCACTCTTCGATGATACAAGTGGTGGTTATTCCA...GAATATTCCACCTAACCCTATGTGTTCAAGCCTTCCAGAAGCAGAATTGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025811.6 |
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CDS-3UTR CAA 90 bp | AACCAAATCTTCAATGTATGGAAAAATGAGTGCCACCTAAGGACCAGGGATCACTCTCCAAGCAGGTTGTaGACACTGAAGGCTACATCA | + |
Preference number: 5 (lower is better) Translates to: NQIFNVWKNECHLRTRDHSPSRL*TLKATS Trigger: TGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGA...GTGATCCCTGGTCCTTAGGTGGCACTCATTTTTCCATACATTGAAGATTTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 90 bp | CTCCTGGGGCTGGGTATCCGCCCAGTTGGCTGGAATAACCACCACTaGTATCATCGAAGAGTGGAGGAGGGTCTGGAGCTGCCCGGGTCC | + |
Preference number: 6 (lower is better) Translates to: LLGLGIRPVGWNNHH*YHRRVEEGLELPGS Trigger: GGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | GTGGAGGAGGGTCTGGAGCTGCCCGGGTCCTATGCTTaGAACCGTGGACTCCATATGCCGAATGGTAAGCCA | + |
Preference number: 6 (lower is better) Translates to: VEEGLELPGSYA*NRGLHMPNGKP Trigger: TGGCTTACCATTCGGCATATGGAGTCCACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS TCA 72 bp | GCACACAGGCCCAACACCTCTGGGGAGAACCTTTGCTaGATGCCTAGCGCCATTCCAGCCAGCAGCACGTAT | + |
Preference number: 6 (lower is better) Translates to: AHRPNTSGENLC*MPSAIPASSTY Trigger: ATACGTGCTGCTGGCTGGAATGGCGCTAGGCATTCAGCAAAGGTTCTCCCCAGAGGTGTTGGGCCTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | ACCACCACTTGTATCATCGAAGAGTGGAGGAGGGTCTaGAGCTGCCCGGGTCCTATGCTTGGAACCGTGGAC | + |
Preference number: 6 (lower is better) Translates to: TTTCIIEEWRRV*SCPGPMLGTVD Trigger: GTCCACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 90 bp | GACACTGAAGGCTACATCAGCTCCTGGGGCTGGGTATCCGCCCAGTaGGCTGGAATAACCACCACTTGTATCATCGAAGAGTGGAGGAGG | + |
Preference number: 6 (lower is better) Translates to: DTEGYISSWGWVSAQ*AGITTTCIIEEWRR Trigger: CCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCCTTCAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS TCA 72 bp | AGCAGCCCCGTGAGCACACTAAGGATCATCCTTTGCTaGATGCCTAGCGCCATTCCAGCCAGCAGCACGTAT | + |
Preference number: 6 (lower is better) Translates to: SSPVSTLRIILC*MPSAIPASSTY Trigger: ATACGTGCTGCTGGCTGGAATGGCGCTAGGCATTCAGCAAAGGATGATCCTTAGTGTGCTCACGGGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237025.2 |
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CDS GCA 72 bp | ACTTGTATCATCGAAGAGTGGAGGAGGGTCTGGAGCTaGCCGGGTCCTATGCTTGGAACCGTGGACTCCATA | + |
Preference number: 6 (lower is better) Translates to: TCIIEEWRRVWS*PGPMLGTVDSI Trigger: TATGGAGTCCACGGTTCCAAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | CATCAGCTCCTGGGGCTGGGTATCCGCCCAGTTGGCTaGAATAACCACCACTTGTATCATCGAAGAGTGGAG | + |
Preference number: 6 (lower is better) Translates to: HQLLGLGIRPVG*NNHHLYHRRVE Trigger: CTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAGCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | GTTGTTGACACTGAAGGCTACATCAGCTCCTGGGGCTaGGTATCCGCCCAGTTGGCTGGAATAACCACCACT | + |
Preference number: 6 (lower is better) Translates to: VVDTEGYISSWG*VSAQLAGITTT Trigger: AGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCCTTCAGTGTCAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | CTGGGTATCCGCCCAGTTGGCTGGAATAACCACCACTaGTATCATCGAAGAGTGGAGGAGGGTCTGGAGCTG | + |
Preference number: 6 (lower is better) Translates to: LGIRPVGWNNHH*YHRRVEEGLEL Trigger: CAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | GGCTACATCAGCTCCTGGGGCTGGGTATCCGCCCAGTaGGCTGGAATAACCACCACTTGTATCATCGAAGAG | + |
Preference number: 6 (lower is better) Translates to: GYISSWGWVSAQ*AGITTTCIIEE Trigger: CTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAACTGGGCGGATACCCAGCCCCAGGAGCTGATGTAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | ATTGCCATATTGGCCACTGGGTCTCCAAGCAGGTTGTaGACACTGAAGGCTACATCAGCTCCTGGGGCTGGG | + |
Preference number: 6 (lower is better) Translates to: IAILATGSPSRL*TLKATSAPGAG Trigger: CCCAGCCCCAGGAGCTGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCCAGTGGCCAATATGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | GCCATTGCCATATTGGCCACTGGGTCTCCAAGCAGGTaGTTGACACTGAAGGCTACATCAGCTCCTGGGGCT | + |
Preference number: 6 (lower is better) Translates to: AIAILATGSPSR*LTLKATSAPGA Trigger: AGCCCCAGGAGCTGATGTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCCAGTGGCCAATATGGCAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | TTGGCTGGAATAACCACCACTTGTATCATCGAAGAGTaGAGGAGGGTCTGGAGCTGCCCGGGTCCTATGCTT | + |
Preference number: 6 (lower is better) Translates to: LAGITTTCIIEE*RRVWSCPGPML Trigger: AAGCATAGGACCCGGGCAGCTCCAGACCCTCCTCCACTCTTCGATGATACAAGTGGTGGTTATTCCAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 90 bp | CACGGACACAAAACGGTGCAGCTCTTTGTGCACTATGTCCTTCCCTaGGGATGCTATGGAGGTGCCATAGGCCATTGCCATATTGGCCAC | + |
Preference number: 6 (lower is better) Translates to: HGHKTVQLFVHYVLP*GCYGGAIGHCHIGH Trigger: GTGGCCAATATGGCAATGGCCTATGGCACCTCCATAGCATCCCAAGGGAAGGACATAGTGCACAAAGAGCTGCACCGTTTTGTGTCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CCA 72 bp | TATGGAGGTGCCATAGGCCATTGCCATATTGGCCACTaGGTCTCCAAGCAGGTTGTTGACACTGAAGGCTAC | + |
Preference number: 6 (lower is better) Translates to: YGGAIGHCHIGH*VSKQVVDTEGY Trigger: GTAGCCTTCAGTGTCAACAACCTGCTTGGAGACCCAGTGGCCAATATGGCAATGGCCTATGGCACCTCCATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | AAAACGGTGCAGCTCTTTGTGCACTATGTCCTTCCCTaGGGATGCTATGGAGGTGCCATAGGCCATTGCCAT | + |
Preference number: 6 (lower is better) Translates to: KTVQLFVHYVLP*GCYGGAIGHCH Trigger: ATGGCAATGGCCTATGGCACCTCCATAGCATCCCAAGGGAAGGACATAGTGCACAAAGAGCTGCACCGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000237603.2 ENSMUST00000238093.2 |
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CDS CAA 72 bp | ATCTTTCCGCGGGGGCAGAGGCACATCATGGCTGTATaGCATTTTCCAGTTCTGATGTGTGTATGGGAAGAC | + |
Preference number: 6 (lower is better) Translates to: IFPRGQRHIMAV*HFPVLMCVWED Trigger: GTCTTCCCATACACACATCAGAACTGGAAAATGCAATACAGCCATGATGTGCCTCTGCCCCCGCGGAAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025811.6 ENSMUST00000236687.2 ENSMUST00000237025.2 ENSMUST00000238093.2 |