RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YEATS4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020171

Ensembl transcript IDs: ENSMUST00000020382.8, ENSMUST00000218887.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCCCGGGAGGCAGCCTGACAGTGTGGGTACCTGGAGTCCTCTCTaGGAAAGCCACGGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: CPGRQPDSVGTWSPL*ESHGRLGTALAAPP
Trigger: GGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTACCCACACTGTCAGGCTGCCTCCCGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CCA 90 bp CGAGTCTTAGAGCACACATGTGCCCCGGGAGGCAGCCTGACAGTGTaGGTACCTGGAGTCCTCTCTGAGAAAGCCACGGCCGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: RVLEHTCAPGGSLTV*VPGVLSEKATAGWG
Trigger: TCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTACCCACACTGTCAGGCTGCCTCCCGGGGCACATGTGTGCTCTAAGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR GCA 90 bp AACGTCGTGGAATGCTACCCAGCATCGAGTCTTAGAGCACACATGTaGCCCGGGAGGCAGCCTGACAGTGTGGGTACCTGGAGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: NVVECYPASSLRAHM*PGRQPDSVGTWSPL
Trigger: GAGAGGACTCCAGGTACCCACACTGTCAGGCTGCCTCCCGGGGCACATGTGTGCTCTAAGACTCGATGCTGGGTAGCATTCCACGACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CCA 90 bp TCTGAAACCACTGTTTTCTTCCCCAGCATGGCATTGGTGTCAGACTaGAAGAGCTTCAGTAAGTGGTACAGAGTCACAGGTCTCTCGTTG +
Preference number: 1 (lower is better)
Translates to: SETTVFFPSMALVSD*KSFSKWYRVTGLSL
Trigger: CAACGAGAGACCTGTGACTCTGTACCACTTACTGAAGCTCTTCCAGTCTGACACCAATGCCATGCTGGGGAAGAAAACAGTGGTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR-3UTR GCA 90 bp CGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCAAGTCCCTCCGCCACAACCGCTACGCCTaGCTGAGGAGGATAAACTAC +
Preference number: 2 (lower is better)
Translates to: RARSSSQKHRSVCGKSLRHNRYA*LRRINY
Trigger: GTAGTTTATCCTCCTCAGGCAGGCGTAGCGGTTGTG...GCGGAGGGACTTGCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR-3UTR CCA 90 bp TTCCTAGATACATCATATACAAAAGAGGTAGACCGGGGCAGATGTGGACCTGAAGGCAGCCTGACAGTGTaGGTACCTGGAGTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: FLDTSYTKEVDRGRCGPEGSLTV*VPGVLS
Trigger: AGAGAGGACTCCAGGTACCCACACTGTCAGGCTGCC...TTCAGGTCCACATCTGCCCCGGTCTACCTCTTTTGTATATGATGTATCTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR-3UTR CCA 90 bp TTCAAGTTCTGCAAACTCTGTTTCGTGCTTATAGGCTCCCAATGTCAGCTGGCGCTGCATCATTGCCGTTaGGTCTTGAAATATCATTTC +
Preference number: 2 (lower is better)
Translates to: FKFCKLCFVLIGSQCQLALHHCR*VLKYHF
Trigger: GAAATGATATTTCAAGACCCAACGGCAATGATGCAG...CGCCAGCTGACATTGGGAGCCTATAAGCACGAAACAGAGTTTGCAGAACTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR TCA 72 bp AGGCAGCCTGACAGTGTGGGTACCTGGAGTCCTCTCTaGGAAAGCCACGGCCGGCTGGGGACCGCGCTCGCA +
Preference number: 3 (lower is better)
Translates to: RQPDSVGTWSPL*ESHGRLGTALA
Trigger: TGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTACCCACACTGTCAGGCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CCA 72 bp GTACCTGGAGTCCTCTCTGAGAAAGCCACGGCCGGCTaGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCG +
Preference number: 3 (lower is better)
Translates to: VPGVLSEKATAG*GPRSQLLPETP
Trigger: CGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CCA 72 bp GAGCACACATGTGCCCCGGGAGGCAGCCTGACAGTGTaGGTACCTGGAGTCCTCTCTGAGAAAGCCACGGCC +
Preference number: 3 (lower is better)
Translates to: EHTCAPGGSLTV*VPGVLSEKATA
Trigger: GGCCGTGGCTTTCTCAGAGAGGACTCCAGGTACCCACACTGTCAGGCTGCCTCCCGGGGCACATGTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR-3UTR CAA 90 bp GGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCTGCATCATTGCCGTaGGGTCTTGAAATATCATTT +
Preference number: 3 (lower is better)
Translates to: GRLGTALAAPPRNTAASVAASLP*GLEISF
Trigger: AAATGATATTTCAAGACCCAACGGCAATGATGCAGC...CACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR GCA 72 bp GAATGCTACCCAGCATCGAGTCTTAGAGCACACATGTaGCCCGGGAGGCAGCCTGACAGTGTGGGTACCTGG +
Preference number: 3 (lower is better)
Translates to: ECYPASSLRAHM*PGRQPDSVGTW
Trigger: CCAGGTACCCACACTGTCAGGCTGCCTCCCGGGGCACATGTGTGCTCTAAGACTCGATGCTGGGTAGCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CCA 72 bp ATGGCATTGGTGTCAGACTGGAAGAGCTTCAGTAAGTaGTACAGAGTCACAGGTCTCTCGTTGGGGTCAATG +
Preference number: 3 (lower is better)
Translates to: MALVSDWKSFSK*YRVTGLSLGSM
Trigger: CATTGACCCCAACGAGAGACCTGTGACTCTGTACCACTTACTGAAGCTCTTCCAGTCTGACACCAATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR GCA 72 bp CAGCTGGCGAGACGTCGTAAGCAGCTGCTGCATCATTaGCGTTGGGTCTTGAAATATCATTTCGTCATAGAA +
Preference number: 3 (lower is better)
Translates to: QLARRRKQLLHH*RWVLKYHFVIE
Trigger: TTCTATGACGAAATGATATTTCAAGACCCAACGGCAATGATGCAGCAGCTGCTTACGACGTCTCGCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR CCA 72 bp ACTGTTTTCTTCCCCAGCATGGCATTGGTGTCAGACTaGAAGAGCTTCAGTAAGTGGTACAGAGTCACAGGT +
Preference number: 3 (lower is better)
Translates to: TVFFPSMALVSD*KSFSKWYRVTG
Trigger: ACCTGTGACTCTGTACCACTTACTGAAGCTCTTCCAGTCTGACACCAATGCCATGCTGGGGAAGAAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR CCA 72 bp ACTCTGAAACCACTGTTTTCTTCCCCAGCATGGCATTaGTGTCAGACTGGAAGAGCTTCAGTAAGTGGTACA +
Preference number: 3 (lower is better)
Translates to: TLKPLFSSPAWH*CQTGRASVSGT
Trigger: TGTACCACTTACTGAAGCTCTTCCAGTCTGACACCAATGCCATGCTGGGGAAGAAAACAGTGGTTTCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
3UTR TCA 72 bp ATATACAAAAGAGGTAGACCGGGGCAGATGTGGACCTaGAGAACTAAACACACATACCAGTCACTAATCCTA +
Preference number: 3 (lower is better)
Translates to: IYKRGRPGQMWT*RTKHTYQSLIL
Trigger: TAGGATTAGTGACTGGTATGTGTGTTTAGTTCTTCAGGTCCACATCTGCCCCGGTCTACCTCTTTTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
CDS-3UTR CCA 90 bp GCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGGCATTGGTGTCAGACTaGAAGAGCTTCAGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: AGWGPRSQLLPETPQRLWALVSD*KSFSKW
Trigger: CCACTTACTGAAGCTCTTCCAGTCTGACACCAATGC...CCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR TCA 90 bp CCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCCAAATGTCTTTCGTCTaGTCGTCTTCTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PAGDRARSSSQKHRSVCGQMSFV*SSSSSF
Trigger: GAAGCTTGAAGAAGACGATCAGACGAAAGACATTTG...GCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR TCA 90 bp CCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCCTTCTTCACATATGCTaGCATATCCTCGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PAGDRARSSSQKHRSVCGLLHIC*HILVSV
Trigger: TACAGAAACGAGGATATGTCAGCATATGTGAAGAAG...GCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
CDS-3UTR TCA 90 bp GAAAGCCACGGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCATTCGTCATAGAACTCTaGAACCACTGTTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ESHGRLGTALAAPPRNTAFVIEL*NHCFLP
Trigger: GGGAAGAAAACAGTGGTTTCAGAGTTCTATGACGAA...TGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR GCA 90 bp GTACCTGGAGTCCTCTCTGAGAAAGCCACGGCCGGCTGGGGACCGCGCTCGCAGCAGCTGCTGCATCATTaGCGTTGGGTCTTGAAATAT +
Preference number: 4 (lower is better)
Translates to: VPGVLSEKATAGWGPRSQQLLHH*RWVLKY
Trigger: ATATTTCAAGACCCAACGGCAATGATGCAGCAGCTG...CTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR CCA 90 bp AAGCCACGGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCCTGCATCATTGCCGTTaGGTCTTGAAATATCATTTC +
Preference number: 4 (lower is better)
Translates to: KPRPAGDRARSSSQKHRSLHHCR*VLKYHF
Trigger: GAAATGATATTTCAAGACCCAACGGCAATGATGCAG...GCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR TCA 90 bp CGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCACTTCTTCACATATGCTaGCATATCCTCGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RLGTALAAPPRNTAASVALLHIC*HILVSV
Trigger: TACAGAAACGAGGATATGTCAGCATATGTGAAGAAG...TGCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
CDS-3UTR GCA 90 bp CCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCTTTCACTTCAAGTTCTaGAAACTCTGTTTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: PAGDRARSSSQKHRSVCGFHFKF*KLCFVL
Trigger: AAGCACGAAACAGAGTTTGCAGAACTTGAAGTGAAA...GCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR CCA 90 bp GTCCTCTCTGAGAAAGCCACGGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCATCTTTCCAAAGTACCTaGCAACATTGCCATAAACGA +
Preference number: 4 (lower is better)
Translates to: VLSEKATAGWGPRSQLLPSFQST*QHCHKR
Trigger: TCGTTTATGGCAATGTTGCCAGGTACTTTGGAAAGA...TGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
CDS-3UTR CCA 90 bp CAGTGTGGGTACCTGGAGTCCTCTCTGAGAAAGCCACGGCCGGCTGGGGACCGCTCTTTCCAAAGTACCTaGCAACATTGCCATAAACGA +
Preference number: 4 (lower is better)
Translates to: QCGYLESSLRKPRPAGDRSFQST*QHCHKR
Trigger: TCGTTTATGGCAATGTTGCCAGGTACTTTGGAAAGA...GCGGTCCCCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCAGGTACCCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2
3UTR CAA 72 bp AGCTTCAGTAAGTGGTACAGAGTCACAGGTCTCTCGTaGGGGTCAATGAAAAATATCTTGATGATGATTTCA +
Preference number: 4 (lower is better)
Translates to: SFSKWYRVTGLS*GSMKNILMMIS
Trigger: TGAAATCATCATCAAGATATTTTTCATTGACCCCAACGAGAGACCTGTGACTCTGTACCACTTACTGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218887.2
CDS-3UTR CAA 90 bp ACGGCCGGCTGGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGGTCACAGGTCTCTCGTaGGGGTCAATGAAAAATATC +
Preference number: 5 (lower is better)
Translates to: TAGWGPRSQLLPETPQRLVTGLS*GSMKNI
Trigger: GATATTTTTCATTGACCCCAACGAGAGACCTGTGAC...CAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCCAGCCGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR CAA 90 bp GGGGACCGCGCTCGCAGCTCCTCCCAGAAACACCGCAGCGTCTGTGGCAAGTCCGCTGCATCATTGCCGTaGGGTCTTGAAATATCATTT +
Preference number: 5 (lower is better)
Translates to: GDRARSSSQKHRSVCGKSAASLP*GLEISF
Trigger: AAATGATATTTCAAGACCCAACGGCAATGATGCAGC...GGACTTGCCACAGACGCTGCGGTGTTTCTGGGAGGAGCTGCGAGCGCGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS-3UTR CAA 90 bp ACATTTATTAAACACTTCCTAGATACATCATATACAAAAGAGGTAGACCGGGGCTTCCCCAGCATGGCATaGGTGTCAGACTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TFIKHFLDTSYTKEVDRGFPSMA*VSDWKS
Trigger: GCTCTTCCAGTCTGACACCAATGCCATGCTGGGGAA...GCCCCGGTCTACCTCTTTTGTATATGATGTATCTAGGAAGTGTTTAATAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020382.8
CDS CCA 72 bp CTTTCCAAAGTACCTGGCAACATTGCCATAAACGATTaGCTTAACGATGGTAACCCCCTTCACTCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LSKVPGNIAIND*LNDGNPLHSPA
Trigger: GGCGGGAGAGTGAAGGGGGTTACCATCGTTAAGCCAATCGTTTATGGCAATGTTGCCAGGTACTTTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020382.8
ENSMUST00000218887.2