Pregenerated sensors for YBEY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033126Ensembl transcript IDs: ENSMUST00000049185.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGCATCCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATaGGAGTGTACATGGACCCACCCTCACACACAGTCTTCCCCGTCC | + |
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Preference number: 1 (lower is better) Translates to: WEHPGSGSTISLWKL*ECTWTHPHTQSSPS Trigger: GGACGGGGAAGACTGTGTGTGAGGGTGGGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGGATGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | GGTCCACTCAGGGGCTCCCTGGTAAGCAGAGGCTCCCTGGAGTCTTaGAGAGGGACGGGACTCTGTCCAACAAGTTCTCTGTCTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: GPLRGSLVSRGSLES*RGTGLCPTSSLSQS Trigger: GCTTTGAGACAGAGAACTTGTTGGACAGAGTCCCGTCCCTCTGCAAGACTCCAGGGAGCCTCTGCTTACCAGGGAGCCCCTGAGTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | CTGGTCTGCAGGCGCCTCCTCCTAGGAGAACAGGCTTCAGTGTTCTaGCACGTTCCTCCCACTTCAGGGAGACAAGGCAATCTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LVCRRLLLGEQASVF*HVPPTSGRQGNLPR Trigger: TCTGGGCAGATTGCCTTGTCTCCCTGAAGTGGGAGGAACGTGCCAGAACACTGAAGCCTGTTCTCCTAGGAGGAGGCGCCTGCAGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | ATGCCTCTAACAGCCAATAGGGGAGCCCCAGTGGCAGGACTACGGTaGCCTGCAGGATGTCAGTGGGATGGCAAGGCTGACAACCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: MPLTANRGAPVAGLR*PAGCQWDGKADNQS Trigger: ACTCTGGTTGTCAGCCTTGCCATCCCACTGACATCCTGCAGGCCACCGTAGTCCTGCCACTGGGGCTCCCCTATTGGCTGTTAGAGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | GGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATaGACCCACCCTCACACACAGTCTTCCCCGTCCCTTTCAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GSGSTISLWKLWECT*THPHTQSSPSLSSL Trigger: CAGGCTTGAAAGGGACGGGGAAGACTGTGTGTGAGGGTGGGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | GCACTTCCTTGGTACTTGGTCCACTCACAGAGTGAAGCTGTAGTGTaGGCTGAGGCCCTCCAGGGCAACAGGACCAGCAGAGATCCACTG | + |
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Preference number: 1 (lower is better) Translates to: ALPWYLVHSQSEAVV*AEALQGNRTSRDPL Trigger: CAGTGGATCTCTGCTGGTCCTGTTGCCCTGGAGGGCCTCAGCCCACACTACAGCTTCACTCTGTGAGTGGACCAAGTACCAAGGAAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | TCTCAGATGGCCTGGCAATGCTGGGCTAACAAGGAGGAAGTAGCCTaGGAGCATCCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: SQMAWQCWANKEEVA*EHPGSGSTISLWKL Trigger: TAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGGATGCTCCCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGCCATCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | TCTCAGACCTTAGGGCAGAACTGCCCTGTGGGTGGGGACACATCCTaGAGGACACCTTCAGACAAGGGACGTCCTTGTCACTTCATTCCC | + |
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Preference number: 1 (lower is better) Translates to: SQTLGQNCPVGGDTS*RTPSDKGRPCHFIP Trigger: GGGAATGAAGTGACAAGGACGTCCCTTGTCTGAAGGTGTCCTGCAGGATGTGTCCCCACCCACAGGGCAGTTCTGCCCTAAGGTCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | ACTGCTCCGCCAATCACGTTGTGCCTAGTTGCTGATGCTCTCTTCTaGCCCTGGAAACCATATAAAAACTCCCTGAATGGGTGCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: TAPPITLCLVADALF*PWKPYKNSLNGCWG Trigger: CCCCCAGCACCCATTCAGGGAGTTTTTATATGGTTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGGCGGAGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | GGAAGATATTTGGCAGATGTTTTGTCTCAGATGGCCTGGCAATGCTaGGCTAACAAGGAGGAAGTAGCCTGGGAGCATCCTGGCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GRYLADVLSQMAWQC*ANKEEVAWEHPGSG Trigger: CCCAGAGCCAGGATGCTCCCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGCCATCTGAGACAAAACATCTGCCAAATATCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | GAAAAGCTTCTCCTGGCCATGCCCCTTAACAGTGGTGACAGGGACTaGACCACTGTGCACAACTTTACTCTGAGAAGATGCACAGTACGC | + |
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Preference number: 1 (lower is better) Translates to: EKLLLAMPLNSGDRD*TTVHNFTLRRCTVR Trigger: GCGTACTGTGCATCTTCTCAGAGTAAAGTTGTGCACAGTGGTGCAGTCCCTGTCACCACTGTTAAGGGGCATGGCCAGGAGAAGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | GGGGTCAGGAAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTaGGAAGACTCTCGTGATCCAGATTTGCACAGACATTTGCATGTT | + |
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Preference number: 1 (lower is better) Translates to: GVRKPYLGSRSLATC*EDSRDPDLHRHLHV Trigger: AACATGCAAATGTCTGTGCAAATCTGGATCACGAGAGTCTTCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTTCCTGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | GAATGTCTTAATGATGGGCCTGCCCAGGCATGTCCTGGCCTGTTCTaGTATGTTCTCAGTCCCAGGCTTCAAAGCTCACAAACAACTCTT | + |
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Preference number: 1 (lower is better) Translates to: ECLNDGPAQACPGLF*YVLSPRLQSSQTTL Trigger: AAGAGTTGTTTGTGAGCTTTGAAGCCTGGGACTGAGAACATAGCAGAACAGGCCAGGACATGCCTGGGCAGGCCCATCATTAAGACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | CTGATAGAAGGAAGATATTTGGCAGATGTTTTGTCTCAGATGGCCTaGCAATGCTGGGCTAACAAGGAGGAAGTAGCCTGGGAGCATCCT | + |
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Preference number: 1 (lower is better) Translates to: LIEGRYLADVLSQMA*QCWANKEEVAWEHP Trigger: AGGATGCTCCCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGCCATCTGAGACAAAACATCTGCCAAATATCTTCCTTCTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR GCA 90 bp | AAGACCAATCAGTTTAAAGGGTGCACTGCTCCGCCAATCACGTTGTaGCTAGTTGCTGATGCTCTCTTCTGCCCCTGGAAACCATATAAA | + |
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Preference number: 1 (lower is better) Translates to: KTNQFKGCTAPPITL*LVADALFCPWKPYK Trigger: TTTATATGGTTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGGCGGAGCAGTGCACCCTTTAAACTGATTGGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR TCA 90 bp | ATCCCAGAAACCACGCAGTGGCTCACAACCATCTGTAATGAGATCTaGCGCCCTCTTCTGGTTTATCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPETTQWLTTICNEI*RPLLVYLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGATAAACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTGAGCCACTGCGTGGTTTCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR TCA 90 bp | CACTGTGGAGGTAAAAAGGCCAGCTTAGGAAGTTTGGGAAGGTCATaGAACACTTGCCCCTCCAGAAGGAAGAGGCTAATTAACATTTCT | + |
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Preference number: 1 (lower is better) Translates to: HCGGKKASLGSLGRS*NTCPSRRKRLINIS Trigger: AGAAATGTTAATTAGCCTCTTCCTTCTGGAGGGGCAAGTGTTTCATGACCTTCCCAAACTTCCTAAGCTGGCCTTTTTACCTCCACAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CCA 90 bp | ATGAATCACAGGACTCAAGTTTTATTTTCTTTCAATAGCACCACATaGCAATCCACAACTCTCTGTGACTCCAGTTCCAGGATAGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: MNHRTQVLFSFNSTT*QSTTLCDSSSRIVN Trigger: ATTGACTATCCTGGAACTGGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAACTTGAGTCCTGTGATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR TCA 90 bp | AGTCCCAGGCTTCAAAGCTCACAAACAACTCTTTGGGCTATTACATaGATCACAGGACTCAAGTTTTATTTTCTTTCAATAGCACCACAT | + |
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Preference number: 1 (lower is better) Translates to: SPRLQSSQTTLWAIT*ITGLKFYFLSIAPH Trigger: ATGTGGTGCTATTGAAAGAAAATAAAACTTGAGTCCTGTGATTCATGTAATAGCCCAAAGAGTTGTTTGTGAGCTTTGAAGCCTGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCAGCTGTAGTGTGGGCTaGGGCCCTCCAGGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: PGSGSTISLWKLWECTWTSCSVG*GPPGQQ Trigger: CTGTTGCCCTGGAGGGCCTCAGCCCACACTACAGCT...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGTCAGAAGGGTGGGAGATAGGGAGGCGCCAGGCCAGTCTGGACATGTCAGTGAAGCTGTAGTGTaGGCTGAGGCCCTCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: THVRRVGDREAPGQSGHVSEAVV*AEALQG Trigger: GCCCTGGAGGGCCTCAGCCCACACTACAGCTTCACT...GACATGTCCAGACTGGCCTGGCGCCTCCCTATCTCCCACCCTTCTGACATGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGTAGTGTGGGCTGAGGCCCTCCAGGGCAACAGGACCAGCAGAGATCCACTGGTTGTGCCTAGTTGCTaGTGCTCTCTTCTGCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AVVWAEALQGNRTSRDPLVVPSC*CSLLPL Trigger: CAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAAC...CAGTGGATCTCTGCTGGTCCTGTTGCCCTGGAGGGCCTCAGCCCACACTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCCTGTGGGCTGTCCCGTaGTGTCTGCAGCCAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: PGSGSTISLWKLWECTWTLWAVP*CLQPTA Trigger: AGCTGTTGGCTGCAGACACCACGGGACAGCCCACAG...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGGTCAGGAAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTGGGAGAACTGCCCTGTGGGTaGGGACACATCCTGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QRGQETLSRFKVPGYLLGELPCG*GHILQD Trigger: GTCCTGCAGGATGTGTCCCCACCCACAGGGCAGTTC...TCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTTCCTGACCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCGGATGCTGTGCCTCCTaGAACAGGGCAGATAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PGSGSTISLWKLWECTWTGCCAS*NRADSA Trigger: GGCACTATCTGCCCTGTTCCAGGAGGCACAGCATCC...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 90 bp | TGGTCCACTCAGGGGCTCCCTGGTAAGCAGAGGCTCCCTGGAGTCTaGCAGAGGGACGGGACTCTGTCCAACAAGTTCTCTGTCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: WSTQGLPGKQRLPGV*QRDGTLSNKFSVSK Trigger: CTTTGAGACAGAGAACTTGTTGGACAGAGTCCCGTCCCTCTGCAAGACTCCAGGGAGCCTCTGCTTACCAGGGAGCCCCTGAGTGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCCACAAGGTGTCCTTTTaGGCTTGCTGGTCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PGSGSTISLWKLWECTWTHKVSF*ACWSAG Trigger: GCCTGCAGACCAGCAAGCCCAAAAGGACACCTTGTG...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGTCAGAAGGGTGGGAGATAGGGAGGCGCCAGGCCAGTCTGGACATGTCAGCACCATCAGCCTCTaGAAGCTATGGGAGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: THVRRVGDREAPGQSGHVSTISL*KLWECT Trigger: TGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCT...GACATGTCCAGACTGGCCTGGCGCCTCCCTATCTCCCACCCTTCTGACATGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACTGGCATAGGTGTATATaGGGGTACACCCAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SWLWEHHQPLEAMGVYMDWHRCI*GYTQQR Trigger: CCTCTGCTGGGTGTACCCGCATATACACCTATGCCA...GTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | TTTACACACGCTGTTTACAAAGCACTGTTCACTCCGGGAGGGTTGGATGGTTGCTCCCTGAATGGGTGCTaGGGGTCGCCGCCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FTHAVYKALFTPGGLDGCSLNGC*GSPPLL Trigger: AAGGAGAGGCGGCGACCCCCAGCACCCATTCAGGGA...GCAACCATCCAACCCTCCCGGAGTGAACAGTGCTTTGTAAACAGCGTGTGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | GATGCACAGTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCAGTGGCAGGACTACGGTaGCCTGCAGGATGTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: DAQYAPEILKMAQVCERPVAGLR*PAGCQW Trigger: CCACTGACATCCTGCAGGCCACCGTAGTCCTGCCAC...TGGCCGCTCACACACTTGAGCCATCTTTAAAATCTCTGGGGCGTACTGTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | GATGCACAGTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCAACCTTAGGGCAGAACTaGCCTGTGGGTGGGGACACA | + |
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Preference number: 2 (lower is better) Translates to: DAQYAPEILKMAQVCERPTLGQN*PVGGDT Trigger: TGTGTCCCCACCCACAGGGCAGTTCTGCCCTAAGGT...TGGCCGCTCACACACTTGAGCCATCTTTAAAATCTCTGGGGCGTACTGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | GTACATGTGAGGTCCACATGCATGCACGTGGGCACTGCAGGCTGTGTAAGTATGCAAGTGAGGATGCTGTaGCTCCTGGAACAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VHVRSTCMHVGTAGCVSMQVRML*LLEQGR Trigger: TCTGCCCTGTTCCAGGAGGCACAGCATCCTCACTTG...CATACTTACACAGCCTGCAGTGCCCACGTGCATGCATGTGGACCTCACATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGGTCAGGAAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTGGGACTGGGAAGACCCCAGTaGACTGGAACAAAAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: QRGQETLSRFKVPGYLLGLGRPQ*TGTKIP Trigger: AGGAATTTTTGTTCCAGTGCACTGGGGTCTTCCCAG...TCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTTCCTGACCCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCGCTGATGCTCTCTTCTaGCCCTGGAAACCATATAAA | + |
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Preference number: 2 (lower is better) Translates to: PGSGSTISLWKLWECTWTADALF*PWKPYK Trigger: TTTATATGGTTTCCAGGGGCAGAAGAGAGCATCAGC...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGGCAGAACTGCCCTGTGGGTGGGGACACATCCTGCAGGACACCTTCAGAAAGACCCCAGTGCACTaGAACAAAAATTCCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LRAELPCGWGHILQDTFRKTPVH*NKNSSC Trigger: GCAAGAGGAATTTTTGTTCCAGTGCACTGGGGTCTT...TCTGAAGGTGTCCTGCAGGATGTGTCCCCACCCACAGGGCAGTTCTGCCCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | GATGCACAGTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCATCCCTGGCTACCTGCTaGGAAGACTCTCGTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: DAQYAPEILKMAQVCERPSLATC*EDSRDP Trigger: TGGATCACGAGAGTCTTCCCAGCAGGTAGCCAGGGA...TGGCCGCTCACACACTTGAGCCATCTTTAAAATCTCTGGGGCGTACTGTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 90 bp | GAAGGGTGGGAGATAGGGAGGCGCCAGGCCAGTCTGGACATGTCTTaGCATTCTCTTTATCTTTATGGCCAAGCAGCCTCAGGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: EGWEIGRRQASLDMS*HSLYLYGQAASGMS Trigger: AGACATTCCTGAGGCTGCTTGGCCATAAAGATAAAGAGAATGCAAAGACATGTCCAGACTGGCCTGGCGCCTCCCTATCTCCCACCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | TTTACACACGCTGTTTACAAAGCACTGTTCACTCCGGGAGGGTTGGATGGTTGCCCGCCAATCACGTTGTaGCTAGTTGCTGATGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FTHAVYKALFTPGGLDGCPPITL*LVADAL Trigger: GAGAGCATCAGCAACTAGGCACAACGTGATTGGCGG...GCAACCATCCAACCCTCCCGGAGTGAACAGTGCTTTGTAAACAGCGTGTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR GCA 90 bp | GATGCACAGTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCAAGATCCTGGATTCCATaGCCAGAGCTGCAAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: DAQYAPEILKMAQVCERPRSWIP*PELQGQ Trigger: TTGACCTTGCAGCTCTGGGCATGGAATCCAGGATCT...TGGCCGCTCACACACTTGAGCCATCTTTAAAATCTCTGGGGCGTACTGTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCGATGGGGGACACTCCTaGCTCTCTGGCCCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSDGGHS*LSGPRR Trigger: TCTCCTGGGGCCAGAGAGTCAGGAGTGTCCCCCATC...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGGTCAGGAAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTGGGAATGTGTACCCACACATaGCACACACCAAATAAAATC | + |
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Preference number: 2 (lower is better) Translates to: QRGQETLSRFKVPGYLLGMCTHT*HTPNKI Trigger: GATTTTATTTGGTGTGTGTCATGTGTGGGTACACAT...TCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTTCCTGACCCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | GTACATGTGAGGTCCACATGCATGCACGTGGGCACTGCAGGCTGTGTAAGTATGGCTCTCTTCTGCCCCTaGAAACCATATAAAAACTCC | + |
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Preference number: 2 (lower is better) Translates to: VHVRSTCMHVGTAGCVSMALFCP*KPYKNS Trigger: GGAGTTTTTATATGGTTTCCAGGGGCAGAAGAGAGC...CATACTTACACAGCCTGCAGTGCCCACGTGCATGCATGTGGACCTCACATGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | TTTACACACGCTGTTTACAAAGCACTGTTCACTCCGGGAGGGTTGGATGGTTGCAAGAAGGGAACAGGCTaGCATAGGTGTATATGCGGG | + |
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Preference number: 2 (lower is better) Translates to: FTHAVYKALFTPGGLDGCKKGTG*HRCICG Trigger: CCCGCATATACACCTATGCCAGCCTGTTCCCTTCTT...GCAACCATCCAACCCTCCCGGAGTGAACAGTGCTTTGTAAACAGCGTGTGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 90 bp | CTAAAGACCAATCAGTTTAAAGGGTGCACTGCTCCGCCAATCACGTaGTGCCTAGTTGCTGATGCTCTCTTCTGCCCCTGGAAACCATAT | + |
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Preference number: 2 (lower is better) Translates to: LKTNQFKGCTAPPIT*CLVADALFCPWKPY Trigger: ATATGGTTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGGCGGAGCAGTGCACCCTTTAAACTGATTGGTCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR TCA 90 bp | GTACATGTGAGGTCCACATGCATGCACGTGGGCACTGCAGGCTGTGTAAGTATGCTCTTCTGGTTTATCTaGAGACAGCTACAGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: VHVRSTCMHVGTAGCVSMLFWFI*RQLQCT Trigger: AGTACACTGTAGCTGTCTTCAGATAAACCAGAAGAG...CATACTTACACAGCCTGCAGTGCCCACGTGCATGCATGTGGACCTCACATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTACAGTGTACTTACATATAATTAATAAATCTTTGGGCTGGAGCGAGCAGAACAGGCTGGGAATGTaGCAGAGCCTTGCCAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TATVYLHIINKSLGWSEQNRLGM*QSLAKP Trigger: AGGCTTGGCAAGGCTCTGCCACATTCCCAGCCTGTT...CTGCTCGCTCCAGCCCAAAGATTTATTAATTATATGTAAGTACACTGTAGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCGTGCGCCTTGGGGTGTaGTTCCAGAGAAACTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSVRLGV*FQRNLV Trigger: AACCAAGTTTCTCTGGAACCACACCCCAAGGCGCAC...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCCACTTCCTTGGTACTTaGTCCACTCACAGAGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSHFLGT*STHRVK Trigger: CTTCACTCTGTGAGTGGACCAAGTACCAAGGAAGTG...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CAA 90 bp | CGATTTTCCTCTCATATGATTATTGATCTGATAGAAGGAAGATATTaGGCAGATGTTTTGTCTCAGATGGCCTGGCAATGCTGGGCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RFSSHMIIDLIEGRY*ADVLSQMAWQCWAN Trigger: GTTAGCCCAGCATTGCCAGGCCATCTGAGACAAAACATCTGCCAAATATCTTCCTTCTATCAGATCAATAATCATATGAGAGGAAAATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCAGGGAAATAGAAAAATaGAGGGCACAGAAGCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSREIEK*RAQKQS Trigger: TGACTGCTTCTGTGCCCTTCATTTTTCTATTTCCCT...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CAA 90 bp | CTGCTATGTTCTCAGTCCCAGGCTTCAAAGCTCACAAACAACTCTTaGGGCTATTACATGAATCACAGGACTCAAGTTTTATTTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLCSQSQASKLTNNS*GYYMNHRTQVLFSF Trigger: GAAAGAAAATAAAACTTGAGTCCTGTGATTCATGTAATAGCCCAAAGAGTTGTTTGTGAGCTTTGAAGCCTGGGACTGAGAACATAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | ACAGCCAATAGGGGAGCCCCAGTGGCAGGACTACGGTaGCCTGCAGGATGTCAGTGGGATGGCAAGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TANRGAPVAGLR*PAGCQWDGKAD Trigger: GTCAGCCTTGCCATCCCACTGACATCCTGCAGGCCACCGTAGTCCTGCCACTGGGGCTCCCCTATTGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | GCGAGGGCACAAGGTGTCCTTTTGGGCTTGCTGGTCTaGAGGCGCCTCCTCCTAGGAGAACAGGCTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARAQGVLLGLLV*RRLLLGEQASV Trigger: CACTGAAGCCTGTTCTCCTAGGAGGAGGCGCCTGCAGACCAGCAAGCCCAAAAGGACACCTTGTGCCCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | GCCTGGCAATGCTGGGCTAACAAGGAGGAAGTAGCCTaGGAGCATCCTGGCTCTGGGAGCACCATCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AWQCWANKEEVA*EHPGSGSTISL Trigger: GAGGCTGATGGTGCTCCCAGAGCCAGGATGCTCCCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCGCCTCTCCTTCGGGTCTGGGAAGACCCCAGTGCACTGGAACAAAAATTCCTAGGCTCCCTGGAGTCTaGCAGAGGGACGGGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AASPSGLGRPQCTGTKIPRLPGV*QRDGTL Trigger: CAGAGTCCCGTCCCTCTGCAAGACTCCAGGGAGCCT...AGGAATTTTTGTTCCAGTGCACTGGGGTCTTCCCAGACCCGAAGGAGAGGCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCATGTCAGAAGGGTGGGAGATAGGGAGGCGCCAGGCCAGTCTGGACATGTCGGGAGGGTTGGATGGTaGCTCTCTCTCCTCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: THVRRVGDREAPGQSGHVGRVGW*LSLLHL Trigger: GAGATGGAGGAGAGAGAGCAACCATCCAACCCTCCC...GACATGTCCAGACTGGCCTGGCGCCTCCCTATCTCCCACCCTTCTGACATGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | AGGGGCTCCCTGGTAAGCAGAGGCTCCCTGGAGTCTTaGAGAGGGACGGGACTCTGTCCAACAAGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGSLVSRGSLES*RGTGLCPTSSL Trigger: CAGAGAACTTGTTGGACAGAGTCCCGTCCCTCTGCAAGACTCCAGGGAGCCTCTGCTTACCAGGGAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | CCAGGAGACAAGGTCTGTGGGCTGTCCCGTGGTGTCTaGAGCCAACAGCTTAAGAAAGGCGAGGGCACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGDKVCGLSRGV*SQQLKKGEGTR Trigger: CCTTGTGCCCTCGCCTTTCTTAAGCTGTTGGCTGCAGACACCACGGGACAGCCCACAGACCTTGTCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGACTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGTKGV Trigger: CACGCCTTTAGTCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | TGGGAGCATCCTGGCTCTGGGAGCACCATCAGCCTCTaGAAGCTATGGGAGTGTACATGGACCCACCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WEHPGSGSTISL*KLWECTWTHPH Trigger: GTGAGGGTGGGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGGATGCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | TTAGGGCAGAACTGCCCTGTGGGTGGGGACACATCCTaGAGGACACCTTCAGACAAGGGACGTCCTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGQNCPVGGDTS*RTPSDKGRPCH Trigger: GTGACAAGGACGTCCCTTGTCTGAAGGTGTCCTGCAGGATGTGTCCCCACCCACAGGGCAGTTCTGCCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | GTCCCCAGTGACTCAGGGAAAAGCTTCTCCTGGCCATaGCCCTTAACAGTGGTGACAGGGACTGCACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VPSDSGKSFSWP*PLTVVTGTAPL Trigger: CAGTGGTGCAGTCCCTGTCACCACTGTTAAGGGGCATGGCCAGGAGAAGCTTTTCCCTGAGTCACTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | CCCTGGAAACCATATAAAAACTCCCTGAATGGGTGCTaGGGGTCGCCGCCTCTCCTTCGGGTCTGGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PWKPYKNSLNGC*GSPPLLRVWED Trigger: GTCTTCCCAGACCCGAAGGAGAGGCGGCGACCCCCAGCACCCATTCAGGGAGTTTTTATATGGTTTCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | TGGTACTTGGTCCACTCACAGAGTGAAGCTGTAGTGTaGGCTGAGGCCCTCCAGGGCAACAGGACCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WYLVHSQSEAVV*AEALQGNRTSR Trigger: TCTGCTGGTCCTGTTGCCCTGGAGGGCCTCAGCCCACACTACAGCTTCACTCTGTGAGTGGACCAAGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATaGGAGTGTACATGGACCCACCCTCACACACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSGSTISLWKL*ECTWTHPHTQS Trigger: AGACTGTGTGTGAGGGTGGGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | GCCGAGAAGAAGGGAACAGGCTGGCATAGGTGTATATaGGGGTACACCCAGCAGAGGGGTCAGGAAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: AEKKGTGWHRCI*GYTQQRGQETL Trigger: TAGGGTTTCCTGACCCCTCTGCTGGGTGTACCCGCATATACACCTATGCCAGCCTGTTCCCTTCTTCTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | CATTTCTCAGACCTTAGGGCAGAACTGCCCTGTGGGTaGGGACACATCCTGCAGGACACCTTCAGACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HFSDLRAELPCG*GHILQDTFRQG Trigger: CCCTTGTCTGAAGGTGTCCTGCAGGATGTGTCCCCACCCACAGGGCAGTTCTGCCCTAAGGTCTGAGAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | AGGCGCCTCCTCCTAGGAGAACAGGCTTCAGTGTTCTaGCACGTTCCTCCCACTTCAGGGAGACAAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RRLLLGEQASVF*HVPPTSGRQGN Trigger: ATTGCCTTGTCTCCCTGAAGTGGGAGGAACGTGCCAGAACACTGAAGCCTGTTCTCCTAGGAGGAGGCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | AGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATaGACCCACCCTCACACACAGTCTTCCCCGTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: STISLWKLWECT*THPHTQSSPSL Trigger: AAGGGACGGGGAAGACTGTGTGTGAGGGTGGGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | ATTCCTCTTGCTTTTTGCATCTATTCCGGCTCCACGTaGTCCACTCAGGGGCTCCCTGGTAAGCAGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IPLAFCIYSGST*STQGLPGKQRL Trigger: GAGCCTCTGCTTACCAGGGAGCCCCTGAGTGGACCACGTGGAGCCGGAATAGATGCAAAAAGCAAGAGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | CCTCCTGGAACAGGGCAGATAGTGCCCCCTCAGGCTTaGAGTCATCATAACAATGTGGCTGGACTCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PPGTGQIVPPQA*SHHNNVAGLRD Trigger: GTCTCTGAGTCCAGCCACATTGTTATGATGACTCCAAGCCTGAGGGGGCACTATCTGCCCTGTTCCAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | ACAATTACAAACAGCAACACAGATGGGGGACACTCCTaGCTCTCTGGCCCCAGGAGACAAGGTCTGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TITNSNTDGGHS*LSGPRRQGLWA Trigger: AGCCCACAGACCTTGTCTCCTGGGGCCAGAGAGTCAGGAGTGTCCCCCATCTGTGTTGCTGTTTGTAATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | GGCACGTTCCTCCCACTTCAGGGAGACAAGGCAATCTaGCCAGACTCTACAGCTAGAAACCCAAAGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTFLPLQGDKAI*PDSTARNPKKH Trigger: GTGCTTCTTTGGGTTTCTAGCTGTAGAGTCTGGGCAGATTGCCTTGTCTCCCTGAAGTGGGAGGAACGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTCCCAAGTGCTGGGACTAAAGGCGTGTaGCACCACTGCCCTGCTCCAAATAAAATAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSAGTKGV*HHCPAPNKIKV Trigger: GACCTTTATTTTATTTGGAGCAGGGCAGTGGTGGCACACGCCTTTAGTCCCAGCACTTGGGAGGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | AATGATGGGCCTGCCCAGGCATGTCCTGGCCTGTTCTaGTATGTTCTCAGTCCCAGGCTTCAAAGCTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: NDGPAQACPGLF*YVLSPRLQSSQ Trigger: TTGTGAGCTTTGAAGCCTGGGACTGAGAACATAGCAGAACAGGCCAGGACATGCCTGGGCAGGCCCATCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | ACAGATTTAGGGCAGCTGAGCAACAGGCTGGGAATGTaGCAGAGCCTTGCCAAGCCTGACAAGATCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TDLGQLSNRLGM*QSLAKPDKILD Trigger: ATCCAGGATCTTGTCAGGCTTGGCAAGGCTCTGCCACATTCCCAGCCTGTTGCTCAGCTGCCCTAAATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | CAGTTTAAAGGGTGCACTGCTCCGCCAATCACGTTGTaGCTAGTTGCTGATGCTCTCTTCTGCCCCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QFKGCTAPPITL*LVADALFCPWK Trigger: TTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGGCGGAGCAGTGCACCCTTTAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | GAATGTGGCAGAGCCTTGCCAAGCCTGACAAGATCCTaGATTCCATGCCCAGAGCTGCAAGGTCAAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECGRALPSLTRS*IPCPELQGQTK Trigger: TTTGGTTTGACCTTGCAGCTCTGGGCATGGAATCCAGGATCTTGTCAGGCTTGGCAAGGCTCTGCCACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | CATCATAACAATGTGGCTGGACTCAGAGACAGCTGCTaGCCAACCCACAGATTTAGGGCAGCTGAGCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HHNNVAGLRDSC*PTHRFRAAEQQ Trigger: CTGTTGCTCAGCTGCCCTAAATCTGTGGGTTGGTCAGCAGCTGTCTCTGAGTCCAGCCACATTGTTATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CAA 90 bp | GTACATGTGAGGTCCACATGCATGCACGTGGGCACTGCAGGCTGTGTAAGTATGTATTTGGCAGATGTTTaGTCTCAGATGGCCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VHVRSTCMHVGTAGCVSMYLADV*SQMAWQ Trigger: TTGCCAGGCCATCTGAGACAAAACATCTGCCAAATA...CATACTTACACAGCCTGCAGTGCCCACGTGCATGCATGTGGACCTCACATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | AGAGCCTTGCCAAGCCTGACAAGATCCTGGATTCCATaGCCAGAGCTGCAAGGTCAAACCAAACCAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RALPSLTRSWIP*PELQGQTKPKT Trigger: TGTTTTTGGTTTGGTTTGACCTTGCAGCTCTGGGCATGGAATCCAGGATCTTGTCAGGCTTGGCAAGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | TATTTGGCAGATGTTTTGTCTCAGATGGCCTGGCAATaGTGGGCTAACAAGGAGGAAGTAGCCTGGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YLADVLSQMAWQ*WANKEEVAWEH Trigger: ATGCTCCCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGCCATCTGAGACAAAACATCTGCCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | ACGTTGTGCCTAGTTGCTGATGCTCTCTTCTGCCCCTaGAAACCATATAAAAACTCCCTGAATGGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLCLVADALFCP*KPYKNSLNGCW Trigger: CCAGCACCCATTCAGGGAGTTTTTATATGGTTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | AAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTaGGAAGACTCTCGTGATCCAGATTTGCACAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: KPYLGSRSLATC*EDSRDPDLHRH Trigger: ATGTCTGTGCAAATCTGGATCACGAGAGTCTTCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | GGAAGATATTTGGCAGATGTTTTGTCTCAGATGGCCTaGCAATGCTGGGCTAACAAGGAGGAAGTAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRYLADVLSQMA*QCWANKEEVAW Trigger: CCAGGCTACTTCCTCCTTGTTAGCCCAGCATTGCCAGGCCATCTGAGACAAAACATCTGCCAAATATCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | TTCAAGGTCCCTGGCTACCTGCTGGGAAGACTCTCGTaGTCCAGATTTGCACAGACATTTGCATGTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FKVPGYLLGRLS*SRFAQTFACCF Trigger: AAAGCAACATGCAAATGTCTGTGCAAATCTGGATCACGAGAGTCTTCCCAGCAGGTAGCCAGGGACCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | ACCACGCAGTGGCTCACAACCATCTGTAATGAGATCTaGCGCCCTCTTCTGGTTTATCTGAAGACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTQWLTTICNEI*RPLLVYLKTAT Trigger: TGTAGCTGTCTTCAGATAAACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTGAGCCACTGCGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | GTGACAGGGACTGCACCACTGTGCACAACTTTACTCTaGGAAGATGCACAGTACGCCCCAGAGATTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VTGTAPLCTTLL*EDAQYAPEILK Trigger: CTTTAAAATCTCTGGGGCGTACTGTGCATCTTCTCAGAGTAAAGTTGTGCACAGTGGTGCAGTCCCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR GCA 72 bp | CCAATCACGTTGTGCCTAGTTGCTGATGCTCTCTTCTaGCCCTGGAAACCATATAAAAACTCCCTGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: PITLCLVADALF*PWKPYKNSLNG Trigger: CCCATTCAGGGAGTTTTTATATGGTTTCCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTACAGTGTACTTACATATAATTAATAAATCTTTGGGCTGGAGCGAGCAGGCACAAGGTGTCCTTTaGGGCTTGCTGGTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TATVYLHIINKSLGWSEQAQGVL*GLLVCR Trigger: CCTGCAGACCAGCAAGCCCAAAAGGACACCTTGTGC...CTGCTCGCTCCAGCCCAAAGATTTATTAATTATATGTAAGTACACTGTAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | GGTAAAAAGGCCAGCTTAGGAAGTTTGGGAAGGTCATaGAACACTTGCCCCTCCAGAAGGAAGAGGCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: GKKASLGSLGRS*NTCPSRRKRLI Trigger: AATTAGCCTCTTCCTTCTGGAGGGGCAAGTGTTTCATGACCTTCCCAAACTTCCTAAGCTGGCCTTTTTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CCA 72 bp | CAGTCTGGACATGTCTTTGCATTCTCTTTATCTTTATaGCCAAGCAGCCTCAGGAATGTCTTAATGATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSGHVFAFSLSL*PSSLRNVLMMG Trigger: GCCCATCATTAAGACATTCCTGAGGCTGCTTGGCCATAAAGATAAAGAGAATGCAAAGACATGTCCAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR TCA 72 bp | GTGATCCAGATTTGCACAGACATTTGCATGTTGCTTTaGACTAGACTTCAGGTCACCAGAATTCCATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VIQICTDICMLL*TRLQVTRIPCS Trigger: GGAACATGGAATTCTGGTGACCTGAAGTCTAGTTCAAAGCAACATGCAAATGTCTGTGCAAATCTGGATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCCTGGTAAGCAGAGGCTCCCTGGAGTCTTGCAGAGGGACGGGACTCTGGTGAAGCCCAGCAGGTaGCAGAGTCCATGGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPGKQRLPGVLQRDGTLVKPSR*QSPWVA Trigger: AGCCACCCATGGACTCTGTCACCTGCTGGGCTTCAC...CAGAGTCCCGTCCCTCTGCAAGACTCCAGGGAGCCTCTGCTTACCAGGGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| 3UTR CAA 72 bp | AACAGCTTAAGAAAGGCGAGGGCACAAGGTGTCCTTTaGGGCTTGCTGGTCTGCAGGCGCCTCCTCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSLRKARAQGVL*GLLVCRRLLLG Trigger: TCCTAGGAGGAGGCGCCTGCAGACCAGCAAGCCCAAAAGGACACCTTGTGCCCTCGCCTTTCTTAAGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
||
| CDS-3UTR TCA 90 bp | GATGCACAGTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCACTTTGGAGCTGTGGGTaGAGCCCAGCAGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAQYAPEILKMAQVCERPLWSCG*SPAGDR Trigger: TCTGTCACCTGCTGGGCTTCACCCACAGCTCCAAAG...TGGCCGCTCACACACTTGAGCCATCTTTAAAATCTCTGGGGCGTACTGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 72 bp | AATCAGTTTAAAGGGTGCACTGCTCCGCCAATCACGTaGTGCCTAGTTGCTGATGCTCTCTTCTGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NQFKGCTAPPIT*CLVADALFCPW Trigger: CCAGGGGCAGAAGAGAGCATCAGCAACTAGGCACAACGTGATTGGCGGAGCAGTGCACCCTTTAAACTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR GCA 90 bp | GCCGCCTCTCCTTCGGGTCTGGGAAGACCCCAGTGCACTGGAACAAAAATTCCTATGGGGACCACCCGCTaGAGATTTTTAATCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: AASPSGLGRPQCTGTKIPMGTTR*RFLITK Trigger: TTTGGTGATTAAAAATCTGCAGCGGGTGGTCCCCAT...AGGAATTTTTGTTCCAGTGCACTGGGGTCTTCCCAGACCCGAAGGAGAGGCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 72 bp | GAGATAGGGAGGCGCCAGGCCAGTCTGGACATGTCTTaGCATTCTCTTTATCTTTATGGCCAAGCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EIGRRQASLDMS*HSLYLYGQAAS Trigger: TGAGGCTGCTTGGCCATAAAGATAAAGAGAATGCAAAGACATGTCCAGACTGGCCTGGCGCCTCCCTATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR TCA 90 bp | TCCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCAGATTCTCATGAAATaGGAAAGAAAGCACGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SWLWEHHQPLEAMGVYMDQILMK*ERKHVS Trigger: ACTGACGTGCTTTCTTTCTCATTTCATGAGAATCTG...GTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR TCA 90 bp | CAGGATGTCAGTGGGATGGCAAGGCTGACAACCAGAGTTCCATCTCTGGGGACAATTATAATCATCCGGTaGGTGTGGCTGAGGAAATTC | + |
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Preference number: 4 (lower is better) Translates to: QDVSGMARLTTRVPSLGTIIIIR*VWLRKF Trigger: GAATTTCCTCAGCCACACTCACCGGATGATTATAAT...TGTCCCCAGAGATGGAACTCTGGTTGTCAGCCTTGCCATCCCACTGACATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCAGAAAGCACGTCAGTTaGGACATTTTTATTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PGSGSTISLWKLWECTWTRKHVS*DIFIPV Trigger: TACAGGAATAAAAATGTCCCAACTGACGTGCTTTCT...GGTCCATGTACACTCCCATAGCTTCCAGAGGCTGATGGTGCTCCCAGAGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR TCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCGAAGTGGCACTCTTCTaGTGGGGACCACCCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSEVALF*WGPPAA Trigger: TGCAGCGGGTGGTCCCCATCAGAAGAGTGCCACTTC...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 72 bp | CACATCCTGCAGGACACCTTCAGACAAGGGACGTCCTaGTCACTTCATTCCCTAAAGACCAATCAGTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: HILQDTFRQGTS*SLHSLKTNQFK Trigger: TTTAAACTGATTGGTCTTTAGGGAATGAAGTGACAAGGACGTCCCTTGTCTGAAGGTGTCCTGCAGGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 72 bp | ACAGCTACAGTGTACTTACATATAATTAATAAATCTTaGGGCTGGAGCGAGCAGGGCCGGAACGAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TATVYLHIINKS*GWSEQGRNEQK Trigger: TTTCTGCTCGTTCCGGCCCTGCTCGCTCCAGCCCAAAGATTTATTAATTATATGTAAGTACACTGTAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTTCTTTCAATAGCACCACATGGCAATCCACAACTCTCTGTGACTCCTGGTTGTACATCTTTTaGCACTCGGCTTTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLFSFNSTTWQSTTLCDSWLYIF*HSALEL Trigger: CAGCTCCAAAGCCGAGTGGCAAAAGATGTACAACCA...GGAGTCACAGAGAGTTGTGGATTGCCATGTGGTGCTATTGAAAGAAAATAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| 3UTR CAA 72 bp | TCTCAGTCCCAGGCTTCAAAGCTCACAAACAACTCTTaGGGCTATTACATGAATCACAGGACTCAAGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SQSQASKLTNNS*GYYMNHRTQVL Trigger: TAAAACTTGAGTCCTGTGATTCATGTAATAGCCCAAAGAGTTGTTTGTGAGCTTTGAAGCCTGGGACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR CAA 90 bp | CAGAGGGGTCAGGAAACCCTATCTAGGTTCAAGGTCCCTGGCTACCTGCTGGGAGCCCCTGCTCAGGGGTaGGAGCCTAGCTCCCGTGTA | + |
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Preference number: 5 (lower is better) Translates to: QRGQETLSRFKVPGYLLGAPAQG*EPSSRV Trigger: TACACGGGAGCTAGGCTCCAACCCCTGAGCAGGGGC...TCCCAGCAGGTAGCCAGGGACCTTGAACCTAGATAGGGTTTCCTGACCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR CAA 90 bp | GGCGAGGGCACAAGGTGTCCTTTTGGGCTTGCTGGTCTGCAGGCGCCTCCTCCTACCAGCTTCTCCTGGTaGTACATCTTTTGCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: GEGTRCPFGLAGLQAPPPTSFSW*YIFCHS Trigger: CGAGTGGCAAAAGATGTACAACCAGGAGAAGCTGGT...AGGAGGAGGCGCCTGCAGACCAGCAAGCCCAAAAGGACACCTTGTGCCCTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS-3UTR CAA 90 bp | GCCGCCTCTCCTTCGGGTCTGGGAAGACCCCAGTGCACTGGAACAAAAATTCCTTTTTGCCACTCGGCTTaGGAGCTGTGGGTGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: AASPSGLGRPQCTGTKIPFCHSA*ELWVKP Trigger: GGGCTTCACCCACAGCTCCAAAGCCGAGTGGCAAAA...AGGAATTTTTGTTCCAGTGCACTGGGGTCTTCCCAGACCCGAAGGAGAGGCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS TCA 72 bp | TGTACATCTTTTGCCACTCGGCTTTGGAGCTGTGGGTaGAGCCCAGCAGGTGACAGAGTCCATGGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CTSFATRLWSCG*SPAGDRVHGWL Trigger: CAGCCACCCATGGACTCTGTCACCTGCTGGGCTTCACCCACAGCTCCAAAGCCGAGTGGCAAAAGATGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS GCA 72 bp | TCCTCCAGCACCAGCTTCTCCTGGTTGTACATCTTTTaGCACTCGGCTTTGGAGCTGTGGGTGAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSTSFSWLYIF*HSALELWVKPS Trigger: GCTGGGCTTCACCCACAGCTCCAAAGCCGAGTGGCAAAAGATGTACAACCAGGAGAAGCTGGTGCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS CAA 72 bp | CTCCTCCAGCACCAGCTTCTCCTGGTTGTACATCTTTaGCCACTCGGCTTTGGAGCTGTGGGTGAAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLQHQLLLVVHL*PLGFGAVGEAQ Trigger: CTGGGCTTCACCCACAGCTCCAAAGCCGAGTGGCAAAAGATGTACAACCAGGAGAAGCTGGTGCTGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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| CDS TCA 72 bp | TCCCCAGGTCAAATTTCTTCACTCCTAAGATACTCCTaGCTAAATCCATCTTCCTGCGAAGTGGCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPGQISSLLRYS*LNPSSCEVALF Trigger: GAAGAGTGCCACTTCGCAGGAAGATGGATTTAGTCAGGAGTATCTTAGGAGTGAAGAAATTTGACCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049185.6 |
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