Pregenerated sensors for YARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022792Ensembl transcript IDs: ENSMUST00000059955.15, ENSMUST00000159683.2, ENSMUST00000159962.8, ENSMUST00000162734.3
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTGTTATCATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTaGTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: FCYHPIPSRAIRNGI*FTACVYDTRSRIKN Trigger: GTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATGATAACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR GCA 90 bp | AAAAATCACAAAACCTTACCCTCGAGGGCCATCAGGAATGGCATTTaGTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: KNHKTLPSRAIRNGI*FTACVYDTRSRIKN Trigger: GTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTAAGGTTTTGTGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 90 bp | CTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATaGCACTCGTTCCAGGATCAAGAACTAATTCAGAAAATGAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LEGHQEWHLLYGMCL*HSFQDQELIQKMKL Trigger: AAGCTTCATTTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| 3UTR TCA 90 bp | TTACTAGAACACTTTCAGGATTTGTTACCTGTCTGTGATTTATACTaGCTCCACCTTCTGTTATCATCCGATACCCTCGAGGGCCATCAG | + |
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Preference number: 1 (lower is better) Translates to: LLEHFQDLLPVCDLY*LHLLLSSDTLEGHQ Trigger: CTGATGGCCCTCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGTATAAATCACAGACAGGTAACAAATCCTGAAAGTGTTCTAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR TCA 90 bp | TGTTGTCCAATTACTAGAACACTTTCAGGATTTGTTACCTGTCTGTaGTTTATACTGACTCCACCTTCTGTTATCATCCGATACCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: CCPITRTLSGFVTCL*FILTPPSVIIRYPR Trigger: TCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGTATAAATCACAGACAGGTAACAAATCCTGAAAGTGTTCTAGTAATTGGACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR CCA 90 bp | CTTTATGTACAGGGTCCAAGGGATGAAGCACTTACTTGGGTTTTCTaGTTATTGCTTTTCCTTCTACCTGTTACTGTTATAAATGGACAT | + |
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Preference number: 1 (lower is better) Translates to: LYVQGPRDEALTWVF*LLLFLLPVTVINGH Trigger: ATGTCCATTTATAACAGTAACAGGTAGAAGGAAAAGCAATAACCAGAAAACCCAAGTAAGTGCTTCATCCCTTGGACCCTGTACATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCCCAGTGCCTCTATGCTaGTATGGTAAAGGGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: HPIPSRAIRNGICFTACVPVPLC*YGKGLV Trigger: CACAAGCCCTTTACCATAGCAGCATAGAGGCACTGG...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGACTCCACCTTCTGTTATCATCCGATACCCTCGAGGGCCATCAGGAATGGCAGACATGACCTCCAGTaGCTCTATGCTGCTATGGTA | + |
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Preference number: 2 (lower is better) Translates to: TDSTFCYHPIPSRAIRNGRHDLQ*LYAAMV Trigger: TACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT...GCCATTCCTGATGGCCCTCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTACTCTTGGTCAGACATaGCCTCCAGTGCCTCTATGC | + |
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Preference number: 2 (lower is better) Translates to: MAFALRHVSMTLVPGSRTTLGQT*PPVPLC Trigger: GCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGT...AGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| 3UTR-3UTR TCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCAAGACCTCCACATTTTaGAAATGGATGATGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: HPIPSRAIRNGICFTACVKTSTF*KWMMDK Trigger: TTTGTCCATCATCCATTTTCAAAATGTGGAGGTCTT...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATACTCTTGGTCAGACATaGCCTCCAGTGCCTCTATGC | + |
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Preference number: 2 (lower is better) Translates to: AFALRHVSMTLVPGSRTNTLGQT*PPVPLC Trigger: GCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGT...ATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTCAACAAATCCCTGAGCTGAATGATGCAACACTTGAAGGAGTCCTTCAGAGACATGACCTCCAGTaGCTCTATGCTGCTATGGTA | + |
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Preference number: 2 (lower is better) Translates to: LCQQIPELNDATLEGVLQRHDLQ*LYAAMV Trigger: TACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT...CTGAAGGACTCCTTCAAGTGTTGCATCATTCAGCTCAGGGATTTGTTGACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGACTCCACCTTCTGTTATCATCCGATACCCTCGAGGGCCATCAGGAATGGCAATTCTTTTAACTCTTaGTCAGACATGACCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TDSTFCYHPIPSRAIRNGNSFNS*SDMTSS Trigger: ACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT...GCCATTCCTGATGGCCCTCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTACAGGGTCCAAGGGATGAAGCACTTACTTGGGTTTTCTGGTTATTGCCCAGTGCCTCTATGCTaGTATGGTAAAGGGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FMYRVQGMKHLLGFSGYCPVPLC*YGKGLV Trigger: CACAAGCCCTTTACCATAGCAGCATAGAGGCACTGG...GCAATAACCAGAAAACCCAAGTAAGTGCTTCATCCCTTGGACCCTGTACATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCACTGGAGAGGCAAACATTGCAAAACAAAGAAAGCAACTGTAACAACTGAGGGCCATCAGGAATaGCATTTGCTTTACGGCATG | + |
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Preference number: 2 (lower is better) Translates to: RSHWRGKHCKTKKATVTTEGHQE*HLLYGM Trigger: CATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTC...AGTTGTTACAGTTGCTTTCTTTGTTTTGCAATGTTTGCCTCTCCAGTGAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR CAA 90 bp | GTACAGGGTCCAAGGGATGAAGCACTTACTTGGGTTTTCTGGTTATaGCTTTTCCTTCTACCTGTTACTGTTATAAATGGACATTGCATT | + |
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Preference number: 2 (lower is better) Translates to: VQGPRDEALTWVFWL*LFLLPVTVINGHCI Trigger: AATGCAATGTCCATTTATAACAGTAACAGGTAGAAGGAAAAGCAATAACCAGAAAACCCAAGTAAGTGCTTCATCCCTTGGACCCTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTCACTGGAGAGGCAAACATTGCAAAACAAAGAAAGCAACTGTAACAACTATCAGGAATGGCATTTaGTTTACGGCATGTGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: RSHWRGKHCKTKKATVTTIRNGI*FTACVY Trigger: ATAGACACATGCCGTAAAGCAAATGCCATTCCTGAT...AGTTGTTACAGTTGCTTTCTTTGTTTTGCAATGTTTGCCTCTCCAGTGAGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAGAGGCAAACATTGCAAAACAAAGAAAGCAACTGTAACAACTGTCACTAATTCTTTTAACTCTTaGTCAGACATGACCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: HWRGKHCKTKKATVTTVTNSFNS*SDMTSS Trigger: ACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT...AGTGACAGTTGTTACAGTTGCTTTCTTTGTTTTGCAATGTTTGCCTCTCCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAAGACCTCCACATTTTaGAAATGGATGATGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLKTSTF*KWMMDK Trigger: TTTGTCCATCATCCATTTTCAAAATGTGGAGGTCTT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACATATTTATCTACACACACAATTTAGATCTCACTGGAGAGGCAAACATGGGTTTTCTGGTTATTaGTTTTCCTTCTACCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RRHIYLHTQFRSHWRGKHGFSGY*FSFYLL Trigger: TAACAGGTAGAAGGAAAAGCAATAACCAGAAAACCC...ATGTTTGCCTCTCCAGTGAGATCTAAATTGTGTGTGTAGATAAATATGTCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR GCA 72 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTaGTTTACGGCATGTGTCTATGACACTCGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HPIPSRAIRNGI*FTACVYDTRSR Trigger: CCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR GCA 72 bp | AAAACCTTACCCTCGAGGGCCATCAGGAATGGCATTTaGTTTACGGCATGTGTCTATGACACTCGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KTLPSRAIRNGI*FTACVYDTRSR Trigger: CCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTAAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | GCTAAACAAACATTAGTGTTAAAGAGAGGACAATGCTaGCATACCAGTTTCTCTAGCACGGTGCTGTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: AKQTLVLKRGQC*HTSFSSTVLCC Trigger: ACAGCACAGCACCGTGCTAGAGAAACTGGTATGTCAGCATTGTCCTCTCTTTAACACTAATGTTTGTTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | CACTTTCAGGATTTGTTACCTGTCTGTGATTTATACTaGCTCCACCTTCTGTTATCATCCGATACCCTCGAG | + |
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Preference number: 3 (lower is better) Translates to: HFQDLLPVCDLY*LHLLLSSDTLE Trigger: CTCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGTATAAATCACAGACAGGTAACAAATCCTGAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR-3UTR CAA 90 bp | TACAAGCAAAGTATGAGGGAGGTCGTACGAATCTTTTCACCTCTCTGTCAACAACCCGGTTTGACTTTATaGTTTGGCTTAACCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: YKQSMREVVRIFSPLCQQPGLTL*FGLTQL Trigger: AAGTTGGGTTAAGCCAAACAATAAAGTCAAACCGGG...TTGTTGACAGAGAGGTGAAAAGATTCGTACGACCTCCCTCATACTTTGCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | CATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATaGCACTCGTTCCAGGATCAAGAACTAATTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: HQEWHLLYGMCL*HSFQDQELIQK Trigger: TTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | CAAGTGACAGGAACTTTATGTACAGGGTCCAAGGGATaGAGCACTTACTTGGGTTTTCTGGTTATTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: QVTGTLCTGSKG*STYLGFLVIAF Trigger: AAAAGCAATAACCAGAAAACCCAAGTAAGTGCTTCATCCCTTGGACCCTGTACATAAAGTTCCTGTCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | GAGTCCTTCAGAGAGTTCAAGGTATTTTCTACTGTATaGACTCCCGGTTTGACTTTATTGTTTGGCTTAACC | + |
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Preference number: 3 (lower is better) Translates to: ESFREFKVFSTV*TPGLTLLFGLT Trigger: GGTTAAGCCAAACAATAAAGTCAAACCGGGAGTTCATACAGTAGAAAATACCTTGAACTCTCTGAAGGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGAAGACCTCCACATTTaGAAAATGGATGATGGACAA | + |
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Preference number: 3 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLEDLHI*KMDDGQ Trigger: TTGTCCATCATCCATTTTCAAAATGTGGAGGTCTTC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
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| 3UTR CCA 72 bp | TTCCAGGCTGAATATTATATAGGCCAACCCTATTTATaGTATGAAAAATGCAGCATTACTTCTGACTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: FQAEYYIGQPYL*YEKCSITSDSG Trigger: GCCAGAGTCAGAAGTAATGCTGCATTTTTCATACCATAAATAGGGTTGGCCTATATAATATTCAGCCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR TCA 72 bp | ATTACTAGAACACTTTCAGGATTTGTTACCTGTCTGTaGTTTATACTGACTCCACCTTCTGTTATCATCCGA | + |
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Preference number: 3 (lower is better) Translates to: ITRTLSGFVTCL*FILTPPSVIIR Trigger: TCGGATGATAACAGAAGGTGGAGTCAGTATAAATCACAGACAGGTAACAAATCCTGAAAGTGTTCTAGTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| 3UTR CCA 72 bp | TTCTACTGTATGAACTCCCGGTTTGACTTTATTGTTTaGCTTAACCCAACTTCTGCAAGAAATGAGTTACAT | + |
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Preference number: 3 (lower is better) Translates to: FYCMNSRFDFIV*LNPTSARNELH Trigger: ATGTAACTCATTTCTTGCAGAAGTTGGGTTAAGCCAAACAATAAAGTCAAACCGGGAGTTCATACAGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| 3UTR CCA 72 bp | GTTATTGCTTTTCCTTCTACCTGTTACTGTTATAAATaGACATTGCATTCCATATCACTTCTTGTAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: VIAFPSTCYCYK*TLHSISLLVEQ Trigger: TTGCTCTACAAGAAGTGATATGGAATGCAATGTCCATTTATAACAGTAACAGGTAGAAGGAAAAGCAATAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCAGAGGCGCGCGTGGTTaGCCGCCAGGGCCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HPIPSRAIRNGICFTACVRGARG*PPGPRA Trigger: GGCTCGAGGCCCTGGCGGCCAACCACGCGCGCCTCT...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| CDS-3UTR GCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCGCCGGCTCAGCAGAGTaGCCATGCGGAAGTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HPIPSRAIRNGICFTACVAGSAE*PCGSGR Trigger: GCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGC...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| CDS-3UTR CCA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTAGAGGCGCGCGTGGTTaGCCGCCAGGGCCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPRGARG*PPGPRA Trigger: GGCTCGAGGCCCTGGCGGCCAACCACGCGCGCCTCT...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR GCA 90 bp | CCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTAGCCAGACCAGGGACTaGGGAACGCGGCACAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PSRAIRNGICFTACVYDTSQTRD*GTRHRR Trigger: GCGCCTGTGCCGCGTTCCGCAGTCCCTGGTCTGGCT...AGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | ACTGACTCCACCTTCTGTTATCATCCGATACCCTCGAGGGCCATCAGGAATGGCGGAGCGAGTCGCCCGTaGGGTCGAAGCCGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: TDSTFCYHPIPSRAIRNGGASRP*GRSRST Trigger: TGTACTGCGGCTTCGACCCCACGGGCGACTCGCTCC...GCCATTCCTGATGGCCCTCGAGGGTATCGGATGATAACAGAAGGTGGAGTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| CDS-3UTR TCA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTCGTTGTCCAGCACCGTaGAAGAGCCCCAGGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPRCPAP*KSPRAG Trigger: GCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACG...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | CCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTACCAGGTGCTGCTCCTaGAACCAGGCCGCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PSRAIRNGICFTACVYDTTRCCS*NQAALS Trigger: GGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGT...AGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR GCA 90 bp | GGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAGCCGGCTCAGCAGAGTaGCCATGCGGAAGTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GMAFALRHVSMTLVPGSRAGSAE*PCGSGR Trigger: GCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGC...TCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTAGCGCGATCACGTTGTaGCCGGCTCGCTGGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPSAITL*PARWKW Trigger: CCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCT...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTCAACAAATCCCTGAGCTGAATGATGCAACACTTGAAGGAGTCCTTCAGGGAGCGAGTCGCCCGTaGGGTCGAAGCCGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: LCQQIPELNDATLEGVLQGASRP*GRSRST Trigger: TGTACTGCGGCTTCGACCCCACGGGCGACTCGCTCC...CTGAAGGACTCCTTCAAGTGTTGCATCATTCAGCTCAGGGATTTGTTGACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGAGGCGCGCGTGGTTaGCCGCCAGGGCCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRGARG*PPGPRA Trigger: GGCTCGAGGCCCTGGCGGCCAACCACGCGCGCCTCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
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| CDS-3UTR GCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTTAGCCAAACCGCATTaGCAGCAGACTTTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HPIPSRAIRNGICFTACVLAKPH*QQTFPA Trigger: AGCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAA...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
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| CDS-3UTR CCA 90 bp | AATTCTTTTAACTCTTGGTCAGACATGACCTCCAGTGCCTCTATGCTGCTATGGACCAGGTGCTGCTCCTaGAACCAGGCCGCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSFNSWSDMTSSASMLLWTRCCS*NQAALS Trigger: GGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGT...CCATAGCAGCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCCGTTGTCCAGCACCGTaGAAGAGCCCCAGGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRCPAP*KSPRAG Trigger: GCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACG...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR TCA 90 bp | CGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATTCAGAAAATGAATGCCCTCGGGGCTCTTaGGACGCGACTGCACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHVSMTLVPGSRTNSENECPRGS*DATARS Trigger: TGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCA...TTCATTTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGCCAGACCAGGGACTaGGGAACGCGGCACAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLSQTRD*GTRHRR Trigger: GCGCCTGTGCCGCGTTCCGCAGTCCCTGGTCTGGCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | GGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAAACAGAGTTAGCAGGTaGCCCACGTGGAGCGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GMAFALRHVSMTLVPGSRNRVSR*PTWSES Trigger: CGACTCGCTCCACGTGGGGCACCTGCTAACTCTGTT...TCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGCCGGCTCAGCAGAGTaGCCATGCGGAAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLAGSAE*PCGSGR Trigger: GCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGACATATTTATCTACACACACAATTTAGATCTCACTGGAGAGGCAAACATCGTTGTCCAGCACCGTaGAAGAGCCCCAGGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRHIYLHTQFRSHWRGKHRCPAP*KSPRAG Trigger: GCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACG...ATGTTTGCCTCTCCAGTGAGATCTAAATTGTGTGTGTAGATAAATATGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCTGCCCTCGGGGCTCTTaGGACGCGACTGCACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLCPRGS*DATARS Trigger: TGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCA...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | CGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATTCAGAAAATGAACTCTTGAGACGCGACTaGACGCTCAGCCGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHVSMTLVPGSRTNSENELLRRD*TLSRLS Trigger: GCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAG...TTCATTTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGGAGCGAGTCGCCCGTaGGGTCGAAGCCGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLGASRP*GRSRST Trigger: TGTACTGCGGCTTCGACCCCACGGGCGACTCGCTCC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCCTCTTGAGACGCGACTaGACGCTCAGCCGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLLLRRD*TLSRLS Trigger: GCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAG...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | AGATCTCACTGGAGAGGCAAACATTGCAAAACAAAGAAAGCAACTGTAACAACTCTCTTGAGACGCGACTaGACGCTCAGCCGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHWRGKHCKTKKATVTTLLRRD*TLSRLS Trigger: GCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAG...AGTTGTTACAGTTGCTTTCTTTGTTTTGCAATGTTTGCCTCTCCAGTGAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGCGCGATCACGTTGTaGCCGGCTCGCTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLSAITL*PARWKW Trigger: CCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCACCAGGTGCTGCTCCTaGAACCAGGCCGCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLTRCCS*NQAALS Trigger: GGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | CGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATTCAGAAAATGAAAACAGAGTTAGCAGGTaGCCCACGTGGAGCGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHVSMTLVPGSRTNSENENRVSR*PTWSES Trigger: CGACTCGCTCCACGTGGGGCACCTGCTAACTCTGTT...TTCATTTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR GCA 90 bp | CATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCAGACTTTCCCAGCTTTaGTCCAGTTGTACTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPIPSRAIRNGICFTACVRLSQL*SSCTCN Trigger: ATTACAAGTACAACTGGAGCAAAGCTGGGAAAGTCT...GACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGTTAGCCAAACCGCATTaGCAGCAGACTTTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNGICFTACVYDTRSRIKLAKPH*QQTFPA Trigger: AGCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAA...CTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR TCA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTAGACCTTCTTGTCCGTaGACAAGCTTTGTTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPRPSCP*TSFVTS Trigger: AGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTCT...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAACAGAGTTAGCAGGTaGCCCACGTGGAGCGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLNRVSR*PTWSES Trigger: CGACTCGCTCCACGTGGGGCACCTGCTAACTCTGTT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | TTATCATCCGATACCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGAAGCTTTGTTACTTCTaGAGCAAGTCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSDTLEGHQEWHLLYGMKLCYF*SKSFLS Trigger: GCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTT...CATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGGTATCGGATGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159683.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCTGTAGCTGCATGATGTaGTCGATCTCTGGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLCSCMM*SISGRG Trigger: TCCCCTCCCAGAGATCGATCACATCATGCAGCTACA...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCACTCTTGGTCAGACATaGCCTCCAGTGCCTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLTLGQT*PPVPLC Trigger: GCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCTTAGCCAAACCGCATTaGCAGCAGACTTTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLLAKPH*QQTFPA Trigger: AGCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAA...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
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| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCCCAGTGCCTCTATGCTaGTATGGTAAAGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLPVPLC*YGKGLV Trigger: CACAAGCCCTTTACCATAGCAGCATAGAGGCACTGG...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGAGGGCCATCAGGAATaGCATTTGCTTTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLEGHQE*HLLYGM Trigger: CATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR TCA 90 bp | GCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATAGACCTTCTTGTCCGTaGACAAGCTTTGTTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFALRHVSMTLVPGSRTNRPSCP*TSFVTS Trigger: AGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTCT...ATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR GCA 90 bp | AATTCTTTTAACTCTTGGTCAGACATGACCTCCAGTGCCTCTATGCTGCTATGGAGACTTTCCCAGCTTTaGTCCAGTTGTACTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSFNSWSDMTSSASMLLWRLSQL*SSCTCN Trigger: ATTACAAGTACAACTGGAGCAAAGCTGGGAAAGTCT...CCATAGCAGCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS-3UTR GCA 90 bp | TTTATGTACAGGGTCCAAGGGATGAAGCACTTACTTGGGTTTTCTGGTTATTGCAAGCTTTGTTACTTCTaGAGCAAGTCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMYRVQGMKHLLGFSGYCKLCYF*SKSFLS Trigger: GCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTT...GCAATAACCAGAAAACCCAAGTAAGTGCTTCATCCCTTGGACCCTGTACATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGACATGACCTCCAGTaGCTCTATGCTGCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRHDLQ*LYAAMV Trigger: TACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGATGTGATCGATCTCTaGGAGGGGAAGGAAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLDVIDL*EGKESE Trigger: TTCACTTTCCTTCCCCTCCCAGAGATCGATCACATC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGACCTTCTTGTCCGTaGACAAGCTTTGTTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRPSCP*TSFVTS Trigger: AGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAAGCTTTGTTACTTCTaGAGCAAGTCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLKLCYF*SKSFLS Trigger: GCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGTCTGTGATTTATACTaGCTCCACCTTCTGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLVCDLY*LHLLLS Trigger: TGATAACAGAAGGTGGAGTCAGTATAAATCACAGAC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCTTTGTTACCTGTCTGTaGTTTATACTGACTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLFVTCL*FILTPP Trigger: AGGTGGAGTCAGTATAAATCACAGACAGGTAACAAA...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAGACTTTCCCAGCTTTaGTCCAGTTGTACTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRLSQL*SSCTCN Trigger: ATTACAAGTACAACTGGAGCAAAGCTGGGAAAGTCT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCATCAGGAATGGCATTTaGTTTACGGCATGTGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLIRNGI*FTACVY Trigger: ATAGACACATGCCGTAAAGCAAATGCCATTCCTGAT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| 3UTR CAA 72 bp | ATATTCCACTCTTGGGTTTCCGAAGACCTCCACATTTaGAAAATGGATGATGGACAAATTTGGACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: IFHSWVSEDLHI*KMDDGQIWTKP Trigger: AGGTTTTGTCCAAATTTGTCCATCATCCATTTTCAAAATGTGGAGGTCTTCGGAAACCCAAGAGTGGAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCAATTCTTTTAACTCTTaGTCAGACATGACCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLNSFNS*SDMTSS Trigger: ACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| 3UTR CAA 72 bp | TCAGTGAAGTTCATAAGAAGATGCAGAAAACTAGACTaGATGTACAGAGAATTTGACTCCAGGTTAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKFIRRCRKLD*MYREFDSRLNL Trigger: CAAATTTAACCTGGAGTCAAATTCTCTGTACATCAAGTCTAGTTTTCTGCATCTTCTTATGAACTTCACTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | GGTTGGCCGCCAGGGCCTCGAGCCCTCGCCGCAGGGCGTGCGCGTTaGCCCGCACGCACTCGGCGCTCAGCGCCTCGCGCCCCTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWPPGPRALAAGRAR*PARTRRSAPRAPWS Trigger: GGACCAAGGGGCGCGAGGCGCTGAGCGCCGAGTGCGTGCGGGCCAACGCGCACGCCCTGCGGCGAGGGCTCGAGGCCCTGGCGGCCAACC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | GCACGCACTCGGCGCTCAGCGCCTCGCGCCCCTTGGTCCGGCCGCTaGGGTCCCCCAGGAGGGCCGTGGAGCCTCCCACGAGCGCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ARTRRSAPRAPWSGR*GPPGGPWSLPRARS Trigger: TGATCGCGCTCGTGGGAGGCTCCACGGCCCTCCTGGGGGACCCCAGCGGCCGGACCAAGGGGCGCGAGGCGCTGAGCGCCGAGTGCGTGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS TCA 90 bp | CCACCAGGTGCTGCTCCTGGAACCAGGCCGCGTTGTCCAGCACCGTaGAAGAGCCCCAGGGCCGGCCGTCCGCGAAGAGGCGCGCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGAAPGTRPRCPAP*KSPRAGRPRRGARG Trigger: ACCACGCGCGCCTCTTCGCGGACGGCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | TCAGCCGGCTCAGCAGAGTGCCCATGCGGAAGTGGCCGCCCACCGTaGCCAGGAAATCCACCAGGTGCTGCTCCTGGAACCAGGCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGSAECPCGSGRPP*PGNPPGAAPGTRPR Trigger: ACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCACGGTGGGCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | GCCGTGGAGCCTCCCACGAGCGCGATCACGTTGTGGCCGGCTCGCTaGAAGTGGAAGAGCCCCAACAGAGTTAGCAGGTGCCCCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVEPPTSAITLWPAR*KWKSPNRVSRCPTW Trigger: CCACGTGGGGCACCTGCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGGCTCCACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | TCCCCCAGGAGGGCCGTGGAGCCTCCCACGAGCGCGATCACGTTGTaGCCGGCTCGCTGGAAGTGGAAGAGCCCCAACAGAGTTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAVEPPTSAITL*PARWKWKSPNRVSR Trigger: CCTGCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGGCTCCACGGCCCTCCTGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | AAGTGGCCGCCCACCGTGGCCAGGAAATCCACCAGGTGCTGCTCCTaGAACCAGGCCGCGTTGTCCAGCACCGTGAAAGAGCCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KWPPTVARKSTRCCS*NQAALSSTVKEPQG Trigger: GCCCTGGGGCTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCACGGTGGGCGGCCACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 90 bp | ATGCGGAAGTGGCCGCCCACCGTGGCCAGGAAATCCACCAGGTGCTaGTCCTGGAACCAGGCCGCGTTGTCCAGCACCGTGAAAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MRKWPPTVARKSTRC*SWNQAALSSTVKEP Trigger: GGGCTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCACGGTGGGCGGCCACTTCCGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 90 bp | AAGAACTCCGCCAAGCTCATGCCCTCGGGGCTCTTGAGACGCGACTaGACGCTCAGCCGGCTCAGCAGAGTGCCCATGCGGAAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KNSAKLMPSGLLRRD*TLSRLSRVPMRKWP Trigger: CGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCATGAGCTTGGCGGAGTTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 90 bp | GAGCCTCCCACGAGCGCGATCACGTTGTGGCCGGCTCGCTGGAAGTaGAAGAGCCCCAACAGAGTTAGCAGGTGCCCCACGTGGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPPTSAITLWPARWK*KSPNRVSRCPTWSE Trigger: CTCGCTCCACGTGGGGCACCTGCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS TCA 90 bp | GCACCTGGTAAAAGAACTCCGCCAAGCTCATGCCCTCGGGGCTCTTaGGACGCGACTGCACGCTCAGCCGGCTCAGCAGAGTGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: APGKRTPPSSCPRGS*DATARSAGSAECPC Trigger: GCATGGGCACTCTGCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCATGAGCTTGGCGGAGTTCTTTTACCAGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTACGAGCGCGATCACGTaGTGGCCGGCTCGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRAIRNGICFTACVYDTTSAIT*WPARWK Trigger: CTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGT...AGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTATGCCCTCGGGGCTCTaGAGACGCGACTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPMPSGL*RRDCTL Trigger: GAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCAT...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS TCA 90 bp | CTTGTGGATGAACTCGTAGCCAGACATGATGTTGCCCAACTGATCTaGTCCGCCCAGTTGGACCCGGCATCCATAGTGCTGGAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVDELVARHDVAQLI*SAQLDPASIVLEKV Trigger: TACCTTTTCCAGCACTATGGATGCCGGGTCCAACTGGGCGGATCAGATCAGTTGGGCAACATCATGTCTGGCTACGAGTTCATCCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | GCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATACGAGCGCGATCACGTaGTGGCCGGCTCGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFALRHVSMTLVPGSRTNTSAIT*WPARWK Trigger: CTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGT...ATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTTGTGTACACCTTTTAGCCAAACCGCATaGCCAGCAGACTTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHDLQCLYAAMVKGLCTPFSQTA*PADFPS Trigger: GCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAAA...AGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTCATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCACGAGCGCGATCACGTaGTGGCCGGCTCGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLTSAIT*WPARWK Trigger: CTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCATGCCCTCGGGGCTCTaGAGACGCGACTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLMPSGL*RRDCTL Trigger: GAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCAT...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCGAGGGCCATCAGGAATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGCTTTTCTGGTTCTTaGACATGTAGCTGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSRAIRNGICFTACVYDTRFSGS*TCSCMM Trigger: CATCATGCAGCTACATGTCAAAGAACCAGAAAAGCG...AGTGTCATAGACACATGCCGTAAAGCAAATGCCATTCCTGATGGCCCTCGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTTTTAACTCTTGGTCAGACATGACCTCCAGTGCCTCTATGCTGCTATGGTTTAGCCAAACCGCATaGCCAGCAGACTTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSFNSWSDMTSSASMLLWFSQTA*PADFPS Trigger: GCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAAA...CCATAGCAGCATAGAGGCACTGGAGGTCATGTCTGACCAAGAGTTAAAAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 90 bp | AGCAGAGTCCAGACCTTCTTGTCCGTGAACAAGCTTTGTTACTTCTaGAGCAAGTCGTTTCTGAGCAACTCGCTTTTCTGGTTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRVQTFLSVNKLCYF*SKSFLSNSLFWFFD Trigger: GTCAAAGAACCAGAAAAGCGAGTTGCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTCTGGACTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 90 bp | GGGCTTGTGTACACCTTCTTGTCCGTGAACAAGCTTTGTTACTTCTaGAGCAAGTCGTTTCTGAGCAACTCGCTTTTCTGGTTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLVYTFLSVNKLCYF*SKSFLSNSLFWFFD Trigger: GTCAAAGAACCAGAAAAGCGAGTTGCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTGTACACAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162734.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCAACAAATCCCTGAGCTGAATGATGCAACACTTGAAGGAGTCCTTCAGGTCCGTGAACAAGCTTaGTTACTTCTGCAGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCQQIPELNDATLEGVLQVREQA*LLLQQV Trigger: GACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGAC...CTGAAGGACTCCTTCAAGTGTTGCATCATTCAGCTCAGGGATTTGTTGACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCTTTAGCCAAACCGCATaGCCAGCAGACTTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLFSQTA*PADFPS Trigger: GCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAAA...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCATTTGCTTTACGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTCGCTTTTCTGGTTCTTaGACATGTAGCTGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: MAFALRHVSMTLVPGSRTRFSGS*TCSCMM Trigger: CATCATGCAGCTACATGTCAAAGAACCAGAAAAGCG...AGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCGTAAAGCAAATGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | CGGCATGTGTCTATGACACTCGTTCCAGGATCAAGAACTAATTCAGAAAATGAAGTCCGTGAACAAGCTTaGTTACTTCTGCAGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHVSMTLVPGSRTNSENEVREQA*LLLQQV Trigger: GACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGAC...TTCATTTTCTGAATTAGTTCTTGATCCTGGAACGAGTGTCATAGACACATGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGTCCGTGAACAAGCTTaGTTACTTCTGCAGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLVREQA*LLLQQV Trigger: GACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGAC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCCGCTTTTCTGGTTCTTaGACATGTAGCTGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLRFSGS*TCSCMM Trigger: CATCATGCAGCTACATGTCAAAGAACCAGAAAAGCG...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGCTATGGTAAAGGGCTaGTGTACACCTTTTAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLAMVKG*CTPFSR Trigger: TCTGCTAAAAGGTGTACACAAGCCCTTTACCATAGC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCCATCAGGAATGGCATTaGCTTTACGGCATGTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLHQEWH*LYGMCL Trigger: TAGACACATGCCGTAAAGCAAATGCCATTCCTGATG...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATGCACATGAGTATTTACATTGTGAGGGGCCTTGTGTATATTCCACTCGAACACTTTCAGGATTaGTTACCTGTCTGTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: FEMHMSIYIVRGLVYIPLEHFQD*LPVCDL Trigger: TAAATCACAGACAGGTAACAAATCCTGAAAGTGTTC...GAGTGGAATATACACAAGGCCCCTCACAATGTAAATACTCATGTGCATTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
||
| CDS GCA 72 bp | TTGGCCGCCAGGGCCTCGAGCCCTCGCCGCAGGGCGTaGGCGTTGGCCCGCACGCACTCGGCGCTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAARASSPRRRA*ALARTHSALSA Trigger: GGCGCTGAGCGCCGAGTGCGTGCGGGCCAACGCGCACGCCCTGCGGCGAGGGCTCGAGGCCCTGGCGGCCAA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | CGGCGCTCAGCGCCTCGCGCCCCTTGGTCCGGCCGCTaGGGTCCCCCAGGAGGGCCGTGGAGCCTCCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RRSAPRAPWSGR*GPPGGPWSLPR Trigger: TCGTGGGAGGCTCCACGGCCCTCCTGGGGGACCCCAGCGGCCGGACCAAGGGGCGCGAGGCGCTGAGCGCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CAA 90 bp | TGGTTGGCCGCCAGGGCCTCGAGCCCTCGCCGCAGGGCGTGCGCGTaGGCCCGCACGCACTCGGCGCTCAGCGCCTCGCGCCCCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WLAARASSPRRRACA*ARTHSALSASRPLV Trigger: GACCAAGGGGCGCGAGGCGCTGAGCGCCGAGTGCGTGCGGGCCAACGCGCACGCCCTGCGGCGAGGGCTCGAGGCCCTGGCGGCCAACCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CAA 90 bp | GTGAAAGAGCCCCAGGGCCGGCCGTCCGCGAAGAGGCGCGCGTGGTaGGCCGCCAGGGCCTCGAGCCCTCGCCGCAGGGCGTGCGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VKEPQGRPSAKRRAW*AARASSPRRRACAL Trigger: CAACGCGCACGCCCTGCGGCGAGGGCTCGAGGCCCTGGCGGCCAACCACGCGCGCCTCTTCGCGGACGGCCGGCCCTGGGGCTCTTTCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | CCTTGGTCCGGCCGCTGGGGTCCCCCAGGAGGGCCGTaGAGCCTCCCACGAGCGCGATCACGTTGTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWSGRWGPPGGP*SLPRARSRCGR Trigger: CCGGCCACAACGTGATCGCGCTCGTGGGAGGCTCCACGGCCCTCCTGGGGGACCCCAGCGGCCGGACCAAGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS TCA 72 bp | GCTGCTCCTGGAACCAGGCCGCGTTGTCCAGCACCGTaGAAGAGCCCCAGGGCCGGCCGTCCGCGAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPGTRPRCPAP*KSPRAGRPRRG Trigger: GCCTCTTCGCGGACGGCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | GAGTCGCCCGTGGGGTCGAAGCCGCAGTACACCGTCTaGGGGGACGAGCCCGCCCTGCGGCGGTCAAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ESPVGSKPQYTV*GDEPALRRSKS Trigger: ACTCTTTGACCGCCGCAGGGCGGGCTCGTCCCCCCAGACGGTGTACTGCGGCTTCGACCCCACGGGCGACTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CAA 90 bp | GGGTCCCCCAGGAGGGCCGTGGAGCCTCCCACGAGCGCGATCACGTaGTGGCCGGCTCGCTGGAAGTGGAAGAGCCCCAACAGAGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPRRAVEPPTSAIT*WPARWKWKSPNRVS Trigger: GCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGGCTCCACGGCCCTCCTGGGGGACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CAA 90 bp | GTGGCCAGGAAATCCACCAGGTGCTGCTCCTGGAACCAGGCCGCGTaGTCCAGCACCGTGAAAGAGCCCCAGGGCCGGCCGTCCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VARKSTRCCSWNQAA*SSTVKEPQGRPSAK Trigger: CTTCGCGGACGGCCGGCCCTGGGGCTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 72 bp | GCGACTGCACGCTCAGCCGGCTCAGCAGAGTGCCCATaGGGAAGTGGCCGCCCACCGTGGCCAGGAAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATARSAGSAECP*GSGRPPWPGNP Trigger: TGGATTTCCTGGCCACGGTGGGCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGCTGAGCGTGCAGTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS GCA 72 bp | GCCAAGCTCATGCCCTCGGGGCTCTTGAGACGCGACTaGACGCTCAGCCGGCTCAGCAGAGTGCCCATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AKLMPSGLLRRD*TLSRLSRVPMR Trigger: CCGCATGGGCACTCTGCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCATGAGCTTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | ACGCTCAGCCGGCTCAGCAGAGTGCCCATGCGGAAGTaGCCGCCCACCGTGGCCAGGAAATCCACCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLSRLSRVPMRK*PPTVARKSTRC Trigger: GCACCTGGTGGATTTCCTGGCCACGGTGGGCGGCCACTTCCGCATGGGCACTCTGCTGAGCCGGCTGAGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CAA 72 bp | AGGAGGGCCGTGGAGCCTCCCACGAGCGCGATCACGTaGTGGCCGGCTCGCTGGAAGTGGAAGAGCCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRAVEPPTSAIT*WPARWKWKSPN Trigger: GTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGGCTCCACGGCCCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | TCAGCAGAGTGCCCATGCGGAAGTGGCCGCCCACCGTaGCCAGGAAATCCACCAGGTGCTGCTCCTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SAECPCGSGRPP*PGNPPGAAPGT Trigger: GGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCACGGTGGGCGGCCACTTCCGCATGGGCACTCTGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | ACGAGCGCGATCACGTTGTGGCCGGCTCGCTGGAAGTaGAAGAGCCCCAACAGAGTTAGCAGGTGCCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: TSAITLWPARWK*KSPNRVSRCPT Trigger: CGTGGGGCACCTGCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | CCTCCCACGAGCGCGATCACGTTGTGGCCGGCTCGCTaGAAGTGGAAGAGCCCCAACAGAGTTAGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPTSAITLWPAR*KWKSPNRVSRC Trigger: GCACCTGCTAACTCTGTTGGGGCTCTTCCACTTCCAGCGAGCCGGCCACAACGTGATCGCGCTCGTGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS CCA 72 bp | CCCACCGTGGCCAGGAAATCCACCAGGTGCTGCTCCTaGAACCAGGCCGCGTTGTCCAGCACCGTGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTVARKSTRCCS*NQAALSSTVKE Trigger: CTCTTTCACGGTGCTGGACAACGCGGCCTGGTTCCAGGAGCAGCACCTGGTGGATTTCCTGGCCACGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
||
| CDS TCA 72 bp | AAAAGAACTCCGCCAAGCTCATGCCCTCGGGGCTCTTaGGACGCGACTGCACGCTCAGCCGGCTCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KRTPPSSCPRGS*DATARSAGSAE Trigger: CTCTGCTGAGCCGGCTGAGCGTGCAGTCGCGTCTCAAGAGCCCCGAGGGCATGAGCTTGGCGGAGTTCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS TCA 72 bp | GAACTCGTAGCCAGACATGATGTTGCCCAACTGATCTaGTCCGCCCAGTTGGACCCGGCATCCATAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ELVARHDVAQLI*SAQLDPASIVL Trigger: CAGCACTATGGATGCCGGGTCCAACTGGGCGGATCAGATCAGTTGGGCAACATCATGTCTGGCTACGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS CAA 72 bp | GACCTCCAGTGCCTCTATGCTGCTATGGTAAAGGGCTaGTGTACACCTTTTAGCAGAGTCCAGACCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DLQCLYAAMVKG*CTPFSRVQTFL Trigger: CAAGAAGGTCTGGACTCTGCTAAAAGGTGTACACAAGCCCTTTACCATAGCAGCATAGAGGCACTGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
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| CDS GCA 72 bp | ACGGTGATGTTTTCTCTCTGTTTAGCCAAACCGCATTaGCAGCAGACTTTCCCAGCTTTGCTCCAGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: TVMFSLCLAKPH*QQTFPALLQLY Trigger: GTACAACTGGAGCAAAGCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAAACAGAGAGAAAACATCACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS CAA 72 bp | AACGGTGATGTTTTCTCTCTGTTTAGCCAAACCGCATaGCCAGCAGACTTTCCCAGCTTTGCTCCAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: NGDVFSLFSQTA*PADFPSFAPVV Trigger: TACAACTGGAGCAAAGCTGGGAAAGTCTGCTGGCAATGCGGTTTGGCTAAACAGAGAGAAAACATCACCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059955.15 ENSMUST00000159683.2 ENSMUST00000159962.8 |
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| CDS CAA 72 bp | AGGGCTTGTGTACACCTTCTTGTCCGTGAACAAGCTTaGTTACTTCTGCAGCAAGTCGTTTCTGAGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: RACVHLLVREQA*LLLQQVVSEQL Trigger: GAGTTGCTCAGAAACGACTTGCTGCAGAAGTAACAAAGCTTGTTCACGGACAAGAAGGTGTACACAAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162734.3 |
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| CDS TCA 72 bp | GCTTCAGGTACCTTTCTACGGAATCATCTTGCTGTCTaGCAAAGAACTGATAAAGTTCAAACGGTGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: ASGTFLRNHLAV*QRTDKVQTVMF Trigger: AAACATCACCGTTTGAACTTTATCAGTTCTTTGTCAGACAGCAAGATGATTCCGTAGAAAGGTACCTGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
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| CDS CAA 72 bp | AGTGAAAAGCTTCAGGTACCTTTCTACGGAATCATCTaGCTGTCTGACAAAGAACTGATAAAGTTCAAACGG | + |
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Preference number: 6 (lower is better) Translates to: SEKLQVPFYGII*LSDKELIKFKR Trigger: CCGTTTGAACTTTATCAGTTCTTTGTCAGACAGCAAGATGATTCCGTAGAAAGGTACCTGAAGCTTTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059955.15 |
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| CDS TCA 72 bp | GTGATCGATCTCTTTCTACGGAATCATCTTGCTGTCTaGCAAAGAACTGATAAAGTTCAAACGGTGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: VIDLFLRNHLAV*QRTDKVQTVMF Trigger: AAACATCACCGTTTGAACTTTATCAGTTCTTTGTCAGACAGCAAGATGATTCCGTAGAAAGAGATCGATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159683.2 ENSMUST00000159962.8 ENSMUST00000162734.3 |
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