Pregenerated sensors for YARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028811Ensembl transcript IDs: ENSMUST00000106054.4, ENSMUST00000133992.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGTCCTGCACCTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTaGGAGATGCAACAAGTCGAGCCGGCAGACGGGATGGTGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSPAPCQQFRPGGSG*EMQQVEPADGMVGG Trigger: CCCTCCCACCATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAGGTGCAGGACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CCA 90 bp | GCCAGATCAAGGGAACCCCAAGAGAGCCAGGGCAAGTCCTGCCTCTaGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATGCTGCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ARSREPQESQGKSCL*CQASGLEAWRMLPA Trigger: GGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTCCCTTGATCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CCA 90 bp | CCTCAGGTTTGGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTaGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAAATCCCACAA | + |
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Preference number: 1 (lower is better) Translates to: PQVWKPGECCQPWRA*ETSRLSFPSFQIPQ Trigger: TTGTGGGATTTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 90 bp | GATCAAGGAGGTCGATTTTGGACTCCTCTTCTGACGAGCTCATTTTaGTCCCAGTTAACCCAGGGACCATGGGATTCATCAGGTGGACCC | + |
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Preference number: 1 (lower is better) Translates to: DQGGRFWTPLLTSSF*SQLTQGPWDSSGGP Trigger: GGGTCCACCTGATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAGAAGAGGAGTCCAAAATCGACCTCCTTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR CCA 90 bp | CCTCTTCTGACGAGCTCATTTTGCTCCCAGTTAACCCAGGGACCATaGGATTCATCAGGTGGACCCGTTTTGAGTAGCCAAGTGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PLLTSSFCSQLTQGP*DSSGGPVLSSQVQE Trigger: TTCCTGCACTTGGCTACTCAAAACGGGTCCACCTGATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAGAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR GCA 90 bp | TCATCTCTCAGGATCACAAACTCAGACTTGAGGGGAAAGAGGACATaGTTGATGAAGGACAGAACCCCGTTGTTCTCCACATTGCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: SSLRITNSDLRGKRT*LMKDRTPLFSTLPG Trigger: GCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGATCCTGAGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR TCA 90 bp | CCAAGTGCAGGAAGATACTTCTCTGCAAAGGTAAAAATCTTCCTCTaGTCAACACCGCCGAACTGGGCGTCTACTTTTAAGTACTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: PSAGRYFSAKVKIFL*STPPNWASTFKYSS Trigger: TGAAGAGTACTTAAAAGTAGACGCCCAGTTCGGCGGTGTTGATCAGAGGAAGATTTTTACCTTTGCAGAGAAGTATCTTCCTGCACTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR TCA 90 bp | TCCAATTACAGGGACCATGGAATAAACTTTTTCTGTGGGTTCTATTaGAACCAGATTTCTCAAGTCAGCTGCCAAGGGAAGAAGGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SNYRDHGINFFCGFY*NQISQVSCQGKKVG Trigger: CCCTACCTTCTTCCCTTGGCAGCTGACTTGAGAAATCTGGTTTCAATAGAACCCACAGAAAAAGTTTATTCCATGGTCCCTGTAATTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 90 bp | CAAGAGAGCCAGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTTaGGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QESQGKSCLWCQASG*EAWRMLPALESLGD Trigger: GTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGCACTGTCTCCTGAGATaGTGCAGCTCACGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: TEGPGCGRQASALAHVRWHCLLR*CSSRDS Trigger: GGAGTCTCGTGAGCTGCATCATCTCAGGAGACAGTG...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCCTGCACTCACACTGTCTCCTGAGATGATGCAGCTCACGAGACTCCGTAAGCCTGGAGAATGCTaGCAGCCCTGGAGAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SCPALTLSPEMMQLTRLRKPGEC*QPWRAW Trigger: CCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTT...ACGGAGTCTCGTGAGCTGCATCATCTCAGGAGACAGTGTGAGTGCAGGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAACCCCGTTGTTCTCCACATTGCCGGGCTCACAGAAGGCCTTCTTCAGCTTCAGGTGGACCCGTTTTaGGTAGCCAAGTGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QNPVVLHIAGLTEGLLQLQVDPF*VAKCRK Trigger: CTTCCTGCACTTGGCTACTCAAAACGGGTCCACCTG...AAGCTGAAGAAGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATGCTCCCTTTCCAAGTCCTaGACCTTGTCAGCAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: RASPASGAKPQVWKPGECSLSKS*TLSAVQ Trigger: CTGAACTGCTGACAAGGTGCAGGACTTGGAAAGGGA...GCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 90 bp | CTGCCTACTGACACAAGCCAAGGGGACACTCGGGATGTCCGTTACTaGTCCCTGCCTGTCTCATCCCAATGTGTGGCTAAAGTCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LPTDTSQGDTRDVRY*SLPVSSQCVAKVSD Trigger: ATCACTGACTTTAGCCACACATTGGGATGAGACAGGCAGGGACAAGTAACGGACATCCCGAGTGTCCCCTTGGCTTGTGTCAGTAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 90 bp | CGATCAAGGAGGTCGATTTTGGACTCCTCTTCTGACGAGCTCATTTaGCTCCCAGTTAACCCAGGGACCATGGGATTCATCAGGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: RSRRSILDSSSDELI*LPVNPGTMGFIRWT Trigger: GGTCCACCTGATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAGAAGAGGAGTCCAAAATCGACCTCCTTGATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR CAA 90 bp | GACTTGAGGGGAAAGAGGACATGCTTGATGAAGGACAGAACCCCGTaGTTCTCCACATTGCCGGGCTCACAGAAGGCCTTCTTCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: DLRGKRTCLMKDRTP*FSTLPGSQKAFFSF Trigger: AAAGCTGAAGAAGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAAGCAGGGAAAACCCCATaGAAACTTGGGAACCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: CQPWRAWETSRLSFPSFQAGKTP*KLGNQC Trigger: ACACTGGTTCCCAAGTTTCCATGGGGTTTTCCCTGC...TTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGCTGTCAGGTTTGGAAGCCTaGAGAATGCTGCCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LKKAPQFQSISILLLTQLSGLEA*RMLPAL Trigger: CAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGA...CAGCTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 90 bp | TCTCTCAGGATCACAAACTCAGACTTGAGGGGAAAGAGGACATGCTaGATGAAGGACAGAACCCCGTTGTTCTCCACATTGCCGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLRITNSDLRGKRTC*MKDRTPLFSTLPGS Trigger: TGAGCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGATCCTGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAAATTTCTCAAGTCAGCTaGCAAGGGAAGAAGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: CQPWRAWETSRLSFPSFQISQVS*QGKKVG Trigger: CCCTACCTTCTTCCCTTGGCAGCTGACTTGAGAAAT...TTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGCCTGGTGGGAGCGGGTaGGAGATGCAACAAGTCGAG | + |
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Preference number: 2 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLPGGSG*EMQQVE Trigger: CTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGG...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGAATCCCACAATTTCCTaGCGGGGAGAAGCTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: ILKKAPQFQSISILLLTQNPTIS*RGEAVI Trigger: AATTACAGCTTCTCCCCGTCAGGAAATTGTGGGATT...CTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR GCA 90 bp | CCCGTTGTTCTCCACATTGCCGGGCTCACAGAAGGCCTTCTTCAGCTTTTTCTTAGGAAGATACTTCTCTaGAAAGGTAAAAATCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PVVLHIAGLTEGLLQLFLRKILL*KGKNLP Trigger: AGGAAGATTTTTACCTTTGCAGAGAAGTATCTTCCT...AAGAAAAAGCTGAAGAAGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGAACCCCATGGAAACTTaGGAACCAGTGTTTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: ILKKAPQFQSISILLLTQNPMET*EPVFFQ Trigger: TTGGAAAAACACTGGTTCCCAAGTTTCCATGGGGTT...CTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGGAGTATCTCACATTCTaGAGAAAGCTCCACAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLEYLTF*RKLHSF Trigger: GAAACTGTGGAGCTTTCTTCAGAATGTGAGATACTC...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGTTCTGTGGGTTCTATTaGAACCAGATTTCTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLFCGFY*NQISQV Trigger: GACTTGAGAAATCTGGTTTCAATAGAACCCACAGAA...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR TCA 72 bp | CTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTaGGATGGTGTCCTGCCTACTGACACAAGCCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LAVVGRPVLWPT*DGVLPTDTSQG Trigger: CCCTTGGCTTGTGTCAGTAGGCAGGACACCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | GTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATaGAACAAGTCGAGCCGGCAGACGGGATGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VSSSDLVGAGER*NKSSRQTGWWE Trigger: CTCCCACCATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | GGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATGCTaGCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: GAKPQVWKPGEC*QPWRAWETSRL Trigger: GAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CCA 72 bp | TCCTGCCTCTGGTGCCAAGCCTCAGGTTTGGAAGCCTaGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SCLWCQASGLEA*RMLPALESLGD Trigger: GTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | TCTGGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATaGTGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SGAKPQVWKPGE*CQPWRAWETSR Trigger: CCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | GAACCCCAAGAGAGCCAGGGCAAGTCCTGCCTCTGGTaGCAAGCCTCAGGTTTGGAAGCCTGGAGAATGCTG | + |
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Preference number: 3 (lower is better) Translates to: EPQESQGKSCLW*QASGLEAWRML Trigger: CAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | AGATCAAGGGAACCCCAAGAGAGCCAGGGCAAGTCCTaGCTCTGGTGCCAAGCCTCAGGTTTGGAAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RSREPQESQGKS*LWCQASGLEAW Trigger: CCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTCCCTTGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CCA 72 bp | AGGGAACCCCAAGAGAGCCAGGGCAAGTCCTGCCTCTaGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATG | + |
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Preference number: 3 (lower is better) Translates to: REPQESQGKSCL*CQASGLEAWRM Trigger: CATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR TCA 72 bp | AGTGCTCTGGCCCACGTGAGATGGTGTCCTGCCTACTaGCACAAGCCAAGGGGACACTCGGGATGTCCGTTA | + |
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Preference number: 3 (lower is better) Translates to: SALAHVRWCPAY*HKPRGHSGCPL Trigger: TAACGGACATCCCGAGTGTCCCCTTGGCTTGTGTCAGTAGGCAGGACACCATCTCACGTGGGCCAGAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGGTGGCGGTTAGGGATTaGCTTGAGATGCTTTATGGA | + |
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Preference number: 3 (lower is better) Translates to: TEGPGCGRQASALAHVRWVAVRD*LEMLYG Trigger: TCCATAAAGCATCTCAAGCAAATCCCTAACCGCCAC...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CCA 72 bp | TGGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTaGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: WKPGECCQPWRA*ETSRLSFPSFQ Trigger: TTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR-3UTR CAA 90 bp | AGGATCACAAACTCAGACTTGAGGGGAAAGAGGACATGCTTGATGAAGGACAGACCGTTGTTCTCCACATaGCCGGGCTCACAGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RITNSDLRGKRTCLMKDRPLFST*PGSQKA Trigger: GGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGG...TCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR CCA 72 bp | ACGAGCTCATTTTGCTCCCAGTTAACCCAGGGACCATaGGATTCATCAGGTGGACCCGTTTTGAGTAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: TSSFCSQLTQGP*DSSGGPVLSSQ Trigger: TTGGCTACTCAAAACGGGTCCACCTGATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR GCA 72 bp | GGTCGATTTTGGACTCCTCTTCTGACGAGCTCATTTTaGTCCCAGTTAACCCAGGGACCATGGGATTCATCA | + |
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Preference number: 3 (lower is better) Translates to: GRFWTPLLTSSF*SQLTQGPWDSS Trigger: TGATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAGAAGAGGAGTCCAAAATCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCAAAACCCCATGGAAACTaGGGAACCAGTGTTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ACLGSVQSSQIKGTPREPKPHGN*GTSVFP Trigger: TGGAAAAACACTGGTTCCCAAGTTTCCATGGGGTTT...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR GCA 72 bp | AGGATCACAAACTCAGACTTGAGGGGAAAGAGGACATaGTTGATGAAGGACAGAACCCCGTTGTTCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: RITNSDLRGKRT*LMKDRTPLFST Trigger: TGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGTGCCAAGCCTCAGGTTaGGAAGCCTGGAGAATGCTG | + |
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Preference number: 3 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLCQASG*EAWRML Trigger: CAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCA...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR TCA 72 bp | GGAAGATACTTCTCTGCAAAGGTAAAAATCTTCCTCTaGTCAACACCGCCGAACTGGGCGTCTACTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: GRYFSAKVKIFL*STPPNWASTFK Trigger: CTTAAAAGTAGACGCCCAGTTCGGCGGTGTTGATCAGAGGAAGATTTTTACCTTTGCAGAGAAGTATCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR TCA 72 bp | ATTTGCTTGAGATGCTTTATGGAGTATCTCACATTCTaGAGAAAGCTCCACAGTTTCAGTCCATCTCCATCC | + |
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Preference number: 3 (lower is better) Translates to: ICLRCFMEYLTF*RKLHSFSPSPS Trigger: GGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAATGTGAGATACTCCATAAAGCATCTCAAGCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 72 bp | CAGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTTaGGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGKSCLWCQASG*EAWRMLPALES Trigger: GCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | CAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCGGCAGACGGGATGACTTCCTCTGGTTCTaGGTTCTTGGCAGGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QTWWERVRDATSRAGRRDDFLWF*VLGRAF Trigger: AAAGGCCCTGCCAAGAACTCAGAACCAGAGGAAGTC...ATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | CTGCACCTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGGTGGCTTGCCCGTGGTaGCCGTGCCCCAGTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: LHLVSSSDLVGAGERCNKVACPW*PCPSKL Trigger: AAGTTTACTGGGGCACGGCCACCACGGGCAAGCCAC...CTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAGGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCTGCACTCACACTGTCTCCTGAGATGATGCAGCTCACGAGACTCCGTCACAGTAGCATGCCCTaGGAGTCCACGCCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCPALTLSPEMMQLTRLRHSSMP*ESTPLI Trigger: GATGAGAGGCGTGGACTCGCAGGGCATGCTACTGTG...ACGGAGTCTCGTGAGCTGCATCATCTCAGGAGACAGTGTGAGTGCAGGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | AGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTTTGGAAGCCTGGAGAATGCTCCAGAGGTTCAACCTaGCGGCTCACCCCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RASPASGAKPQVWKPGECSRGST*RLTPST Trigger: TGTAGAAGGGGTGAGCCGCCAGGTTGAACCTCTGGA...GCATTCTCCAGGCTTCCAAACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | AGTGATCCCAGGTTAGGTAAGCGTAGCAGCTGCCCTGCACTCACACTGTCTCCTCCAGCCGGGATGGGATaGCTTCCTCTGGTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDPRLGKRSSCPALTLSPPAGMG*LPLVLS Trigger: ACTCAGAACCAGAGGAAGTCATCCCATCCCGGCTGG...AGGAGACAGTGTGAGTGCAGGGCAGCTGCTACGCTTACCTAACCTGGGATCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | CTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCTTTCTTCTTGGGCTTaGGCTCCTCATCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSSDLVGAGERCNKSSLSSWA*APHLAG Trigger: GCCAGCCAGATGAGGAGCTCAAGCCCAAGAAGAAAG...GCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCGGCAGACGGGATGGTTACCTCACACCCTaGCTTCAAAAAGTCAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTWWERVRDATSRAGRRDGYLTP*LQKVSD Trigger: ATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAACC...ATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCTGCACTCACACTGTCTCCTGAGATGATGCAGCTCACGAGACTCCGTCGTTGTTCTCCACATTaGCGGGCTCACAGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCPALTLSPEMMQLTRLRRCSPH*RAHRRP Trigger: AGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACG...ACGGAGTCTCGTGAGCTGCATCATCTCAGGAGACAGTGTGAGTGCAGGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCTCTGGGGTTTCAGATTaGACAGCACCACCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSSDLVGAGERCNKSSSGVSD*TAPPPA Trigger: GGCTGGTGGTGGTGCTGTGCAATCTGAAACCCCAGA...GCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | GGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTATCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSLENAASPGELGRPLGSIPAWS*SWFAST Trigger: AGTGGAAGCAAACCAACTTCATGACCAAGCTGGGAT...AGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | AGGGAACCCCAAGAGAGCCAGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTCAGCTTCTTCAGGGCTaGAGTATTAAACTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REPQESQGKSCLWCQASGQLLQG*SIKLLS Trigger: AGAGAGAAGTTTAATACTCCAGCCCTGAAGAAGCTG...ACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 72 bp | GACACAAGCCAAGGGGACACTCGGGATGTCCGTTACTaGTCCCTGCCTGTCTCATCCCAATGTGTGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DTSQGDTRDVRY*SLPVSSQCVAK Trigger: TTTAGCCACACATTGGGATGAGACAGGCAGGGACAAGTAACGGACATCCCGAGTGTCCCCTTGGCTTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 72 bp | GGAAAGAGGACATGCTTGATGAAGGACAGAACCCCGTaGTTCTCCACATTGCCGGGCTCACAGAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKRTCLMKDRTP*FSTLPGSQKAF Trigger: GAAGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR TCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCAAGGAGGCTTCTGCTTTaGAGGATCTGGGTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPRRLLL*RIWVGS Trigger: GCTGCCTACCCAGATCCTTCAAAGCAGAAGCCTCCT...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTGCACCTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGAGGGGAAAGAGGACATaGTTGATGAAGGACAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LHLVSSSDLVGAGERCNKRGKRT*LMKDRT Trigger: GGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCT...CTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAGGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCAAGCACACAGTAGCATaGCCTGCGAGTCCACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTKHTVA*PASPRL Trigger: GAGGCGTGGACTCGCAGGGCATGCTACTGTGTGCTT...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | CTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGCTGAAAGTAAGCCACGTGTaGCTTGCCCGTGGTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKKAPQFQSISILLLTQLKVSHV*LARGGR Trigger: ACGGCCACCACGGGCAAGCCACACGTGGCTTACTTT...CAGCTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCATCTTGGCAGGGCCTTTaGCAGGAGGCTTCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPSWQGL*QEASAL Trigger: CAAAGCAGAAGCCTCCTGCCAAAGGCCCTGCCAAGA...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | TGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAAGATATCCAGCCGGGATaGGATGACTTCCTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQPWRAWETSRLSFPSFQDIQPG*DDFLWF Trigger: GAACCAGAGGAAGTCATCCCATCCCGGCTGGATATC...TTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | AGTGATCCCAGGTTAGGTAAGCGTAGCAGCTGCCCTGCACTCACACTGTCTCCTTCACAAACTCAGACTTaGGGGGAAAGAGGACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDPRLGKRSSCPALTLSPSQTQT*GERGHA Trigger: AGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGA...AGGAGACAGTGTGAGTGCAGGGCAGCTGCTACGCTTACCTAACCTGGGATCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | CTTTTAAGTACTCTTCATCCAAAGCCTGCAGACCGGGGTACAGCAGACCACTCAGGGCACACAATTTGCTaGGCTGGTAGTCGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTLHPKPADRGTADHSGHTIC*AGSRCL Trigger: AAGGCACCGACTACCAGCTCAGCAAATTGTGTGCCC...TGAGTGGTCTGCTGTACCCCGGTCTGCAGGCTTTGGATGAAGAGTACTTAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCAGGTCTGCAAACAGGATaGTTACCTCACACCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPGLQTG*LPHTLP Trigger: AGGCAGGGTGTGAGGTAACCATCCTGTTTGCAGACC...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | AGGGAACCCCAAGAGAGCCAGGGCAAGTCCTGCCTCTGGTGCCAAGCCTCAGGTAGGAAGATACTTCTCTaGAAAGGTAAAAATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: REPQESQGKSCLWCQASGRKILL*KGKNLP Trigger: AGGAAGATTTTTACCTTTGCAGAGAAGTATCTTCCT...ACCTGAGGCTTGGCACCAGAGGCAGGACTTGCCCTGGCTCTCTTGGGGTTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCACTATCTGCATCTGGGTaGTTCTCCACGCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPLSASG*FSTLRI Trigger: AATCCTCAGCGTGGAGAAGCACCCAGATGCAGATAG...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCTTAACCCAGGGACCATaGGATTCATCAGGTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTLTQGP*DSSGGP Trigger: GGGTCCACCTGATGAATCCCATGGTCCCTGGGTTAA...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCAAGGCTATCTGCATCTaGGTGCTTCTCCACGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTKAICI*VLLHAE Trigger: CTCAGCGTGGAGAAGCACCCAGATGCAGATAGCCTT...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCAACGCCTCTCATCTTCTaGGGTTTCAGATTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPTPLIF*GFRLHS Trigger: GCTGTGCAATCTGAAACCCCAGAAGATGAGAGGCGT...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| 3UTR CAA 72 bp | ACCCAGGGACCATGGGATTCATCAGGTGGACCCGTTTaGAGTAGCCAAGTGCAGGAAGATACTTCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQGPWDSSGGPV*SSQVQEDTSLQ Trigger: TTGCAGAGAAGTATCTTCCTGCACTTGGCTACTCAAAACGGGTCCACCTGATGAATCCCATGGTCCCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR CAA 72 bp | TGCTTGATGAAGGACAGAACCCCGTTGTTCTCCACATaGCCGGGCTCACAGAAGGCCTTCTTCAGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLMKDRTPLFST*PGSQKAFFSFF Trigger: GAAAAAGCTGAAGAAGGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR TCA 90 bp | TGCAAAGGTAAAAATCTTCCTCTGATCAACACCGCCGAACTGGGCGTCTACTTTGAGGAACCCTTATCGTaGGCCTGCTGCTGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKGKNLPLINTAELGVYFEEPLS*ACCCFP Trigger: TGGAAAGCAGCAGCAGGCTCACGATAAGGGTTCCTC...AAAGTAGACGCCCAGTTCGGCGGTGTTGATCAGAGGAAGATTTTTACCTTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR GCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCTTCCGGGTGATAAGATaGAGCTTCTCCTCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTFRVIR*SFSSGL Trigger: AAGCCCTGAGGAGAAGCTGCATCTTATCACCCGGAA...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCTGACGAGCTCATTTTaGTCCCAGTTAACCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTLTSSF*SQLTQG Trigger: TCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAG...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCACAGCGATCTTGGACATaGGTACAAAGTAAGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPQRSWT*VQSKPR Trigger: ACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTG...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCGTATGCATGGAGGTCTaGAAACAGGATGGTTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTQLACLGSVQSSQIKGTVCMEV*KQDGYL Trigger: GAGGTAACCATCCTGTTTGCAGACCTCCATGCATAC...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | CTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGCTGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKKAPQFQSISILLLTQLVMKLV*FHCAMH Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...CAGCTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGCGCTCACCACAGTCCTaGGTTCAGCTTCCCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLRSPQS*VQLPPH Trigger: ATGTGGGGGAAGCTGAACCCAGGACTGTGGTGAGCG...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR TCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGCAGGTGGACCCGTTTTaGGTAGCCAAGTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLQVDPF*VAKCRK Trigger: CTTCCTGCACTTGGCTACTCAAAACGGGTCCACCTG...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR GCA 90 bp | TTCTTCACGTCCTCCTTCCGATCAAGGAGGTCGATTTTGGACTCCTCTTCTGACCCGTGTGCCTATATTTaGATACATGGGCACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: FFTSSFRSRRSILDSSSDPCAYI*IHGHTI Trigger: AATTGTGTGCCCATGTATGCAAATATAGGCACACGG...GTCAGAAGAGGAGTCCAAAATCGACCTCCTTGATCGGAAGGAGGACGTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| 3UTR CAA 72 bp | ATCACAAACTCAGACTTGAGGGGAAAGAGGACATGCTaGATGAAGGACAGAACCCCGTTGTTCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: ITNSDLRGKRTC*MKDRTPLFSTL Trigger: CAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGACCACCAGCCTGTCCTaGAGTTCTTCTTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLTTSLS*SSSLGT Trigger: TGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGT...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCACATTCTCATAGTAACTaGTTCGAAGTTCTAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLGSVQSSQIKGTPREPHSHSN*FEVLEA Trigger: AGCTTCTAGAACTTCGAACCAGTTACTATGAGAATG...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CCA 90 bp | TCTTCTGACGAGCTCATTTTGCTCCCAGTTAACCCAGGGACCATGGGATTCATCCTATATTTGCATACATaGGCACACAATTTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDELILLPVNPGTMGFILYLHT*AHNLLS Trigger: GCTCAGCAAATTGTGTGCCCATGTATGCAAATATAG...GATGAATCCCATGGTCCCTGGGTTAACTGGGAGCAAAATGAGCTCGTCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
||
| 3UTR CAA 72 bp | CCGTGCAGAAAGCCTTTTCAGACACTTTATTTGAACTaGACAGTGGCGGTTAGGGATTTGCTTGAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCRKPFQTLYLN*TVAVRDLLEML Trigger: AAGCATCTCAAGCAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCTGCACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| 3UTR CAA 72 bp | ACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTaGCTTGAGATGCTTTATGGAGTATCTCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLYLNLTVAVRD*LEMLYGVSHIL Trigger: CAGAATGTGAGATACTCCATAAAGCATCTCAAGCAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGCCGTTGTTCTCCACATaGCCGGGCTCACAGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEGPGCGRQASALAHVRWPLFST*PGSQKA Trigger: GGCCTTCTGTGAGCCCGGCAATGTGGAGAACAACGG...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| CDS CCA 90 bp | CGTTCACCAGGAGCAGAGCCAGCAGGAGGGTCCAGAGGTTCAACCTaGCGGCTCACCCCTTCTACAGAAGCACACAGTAGCATGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPGAEPAGGSRGST*RLTPSTEAHSSMPC Trigger: GCAGGGCATGCTACTGTGTGCTTCTGTAGAAGGGGTGAGCCGCCAGGTTGAACCTCTGGACCCTCCTGCTGGCTCTGCTCCTGGTGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTAAGGACAGAACCCCGTaGTTCTCCACATTGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLENAASPGELGRPLGSKDRTP*FSTLPG Trigger: GCCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTT...AGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| CDS-3UTR CAA 90 bp | CAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCGGCAGACGGGATTTCTTGGCAGGGCCTTaGGCAGGAGGCTTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QTWWERVRDATSRAGRRDFLAGP*AGGFCF Trigger: AAAGCAGAAGCCTCCTGCCAAAGGCCCTGCCAAGAA...ATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | CAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCGGCAGACGGGATTTCTGGGGTTTCAGATaGCACAGCACCACCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTWWERVRDATSRAGRRDFWGFR*HSTTTS Trigger: GCTGGTGGTGGTGCTGTGCAATCTGAAACCCCAGAA...ATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 90 bp | GGTACACATCCAGTGTGTACTCTCTCGGCAGCACCCGGTGTGCTCTaGGGATTCGCCGTCTTCAGAGGAACCCTTATCGTGAGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTHPVCTLSAAPGVL*GFAVFRGTLIVSLL Trigger: CAGCAGGCTCACGATAAGGGTTCCTCTGAAGACGGCGAATCCGCAGAGCACACCGGGTGCTGCCGAGAGAGTACACACTGGATGTGTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGTCAGGTGGACCCGTTTaGAGTAGCCAAGTGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEGPGCGRQASALAHVRWSGGPV*SSQVQE Trigger: TTCCTGCACTTGGCTACTCAAAACGGGTCCACCTGA...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 90 bp | GCATGCCCTGCGAGTCCACGCCTCTCATCTTCTGGGGTTTCAGATTaGACAGCACCACCACCAGCCTGTCCTGCAGTTCTTCTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ACPASPRLSSSGVSD*TAPPPACPAVLLWA Trigger: TGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGTGCAATCTGAAACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 90 bp | ACCTGGCGGCTCACCCCTTCTACAGAAGCACACAGTAGCATGCCCTaGGAGTCCACGCCTCTCATCTTCTGGGGTTTCAGATTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TWRLTPSTEAHSSMP*ESTPLIFWGFRLHS Trigger: GCTGTGCAATCTGAAACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGCTACTGTGTGCTTCTGTAGAAGGGGTGAGCCGCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | GAAGCACACAGTAGCATGCCCTGCGAGTCCACGCCTCTCATCTTCTaGGGTTTCAGATTGCACAGCACCACCACCAGCCTGTCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EAHSSMPCESTPLIF*GFRLHSTTTSLSCS Trigger: ACTGCAGGACAGGCTGGTGGTGGTGCTGTGCAATCTGAAACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGCTACTGTGTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTTTTCTTGGCGTCGTGTaGTGTGACCACAGAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLENAASPGELGRPLGSFLGVV*CDHRGQ Trigger: CTGTCCTCTGTGGTCACACAACACGACGCCAAGAAA...AGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | CAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCGAGCCGGCAGACGGGATTCCTGCAGTTCTTCTTaGGGCACAAACTGTACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTWWERVRDATSRAGRRDSCSSS*GTNCTR Trigger: CCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGA...ATCCCGTCTGCCGGCTCGACTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGGAGACGAATCCCAGCTaGGTCATGAAGTTGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEGPGCGRQASALAHVRWETNPS*VMKLVC Trigger: GCAAACCAACTTCATGACCAAGCTGGGATTCGTCTC...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 90 bp | GTTCAACCTGGCGGCTCACCCCTTCTACAGAAGCACACAGTAGCATaGCCTGCGAGTCCACGCCTCTCATCTTCTGGGGTTTCAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VQPGGSPLLQKHTVA*PASPRLSSSGVSDC Trigger: GCAATCTGAAACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGCTACTGTGTGCTTCTGTAGAAGGGGTGAGCCGCCAGGTTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | TCAGATTGCACAGCACCACCACCAGCCTGTCCTGCAGTTCTTCTTTaGGCACAAACTGTACGAGGCCGCTCACCACAGTCCTGGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDCTAPPPACPAVLL*AQTVRGRSPQSWVQ Trigger: CTGAACCCAGGACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGTGCAATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAATGCTGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLENAASPGELGRPLGSGHEVG*LPLCDA Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...AGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCAGCATTCTCCAGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS TCA 90 bp | CCTGCTTCACAACCTCAGCCCCCGCTTTCTTGGCGTCGTGTTGTGTaGCCACAGAGGACAGTCGGTACACATCCAGTGTGTACTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PASQPQPPLSWRRVV*PQRTVGTHPVCTLC Trigger: GCAAAGAGTACACACTGGATGTGTACCGACTGTCCTCTGTGGTCACACAACACGACGCCAAGAAAGCGGGGGCTGAGGTTGTGAAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | TGGTTACCTCACACCCTGCCTTCAAAAAGTCAGCGATCTTGGACATaGGTACAAAGTAAGCCACGTGTGGCTTGCCCGTGGTGGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLPHTLPSKSQRSWT*VQSKPRVACPWWPC Trigger: GCACGGCCACCACGGGCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | AGCTGCCCTGCACTCACACTGTCTCCTGAGATGATGCAGCTCACGAGACTCCGTATGGGGTCCAGCAACTaGTTCAGGGCGACTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SCPALTLSPEMMQLTRLRMGSSN*FRATST Trigger: TGTTGAAGTCGCCCTGAACAAGTTGCTGGACCCCAT...ACGGAGTCTCGTGAGCTGCATCATCTCAGGAGACAGTGTGAGTGCAGGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGACCTGGCTGTGGTAGGCAGGCCAGTGCTCTGGCCCACGTGAGATGGTCAAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TEGPGCGRQASALAHVRWSKTFF*GLSSSS Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTTGA...CCATCTCACGTGGGCCAGAGCACTGGCCTGCCTACCACAGCCAGGTCCTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | TGCCAGCCCTGGAGAGCTTGGGAGACCTCTAGGCTCTCTTTCCCTTCTTTTCAACAGGGGGCTTTCATGTaGTCCAGGTATGCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQPWRAWETSRLSFPSFQQGAFM*SRYAWR Trigger: CCTCCATGCATACCTGGACAACATGAAAGCCCCCTG...TTGAAAAGAAGGGAAAGAGAGCCTAGAGGTCTCCCAAGCTCTCCAGGGCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | CTGCACCTTGTCAGCAGTTCAGACCTGGTGGGAGCGGGTGAGAGATGCAACAAGTCAAGGAGGTCGATTTaGGACTCCTCTTCTGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHLVSSSDLVGAGERCNKSRRSI*DSSSDE Trigger: CTCGTCAGAAGAGGAGTCCAAAATCGACCTCCTTGA...CTTGTTGCATCTCTCACCCGCTCCCACCAGGTCTGAACTGCTGACAAGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | AGTGATCCCAGGTTAGGTAAGCGTAGCAGCTGCCCTGCACTCACACTGTCTCCTACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDPRLGKRSSCPALTLSPTFFLG*SSSSGW Trigger: CCAGCCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...AGGAGACAGTGTGAGTGCAGGGCAGCTGCTACGCTTACCTAACCTGGGATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | CAAAAAGTCAGCGATCTTGGACATGGGTACAAAGTAAGCCACGTGTaGCTTGCCCGTGGTGGCCGTGCCCCAGTAAACTTTAAGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QKVSDLGHGYKVSHV*LARGGRAPVNFKFP Trigger: CGGGAACTTAAAGTTTACTGGGGCACGGCCACCACGGGCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | ACAGGATGGTTACCTCACACCCTGCCTTCAAAAAGTCAGCGATCTTaGACATGGGTACAAAGTAAGCCACGTGTGGCTTGCCCGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGWLPHTLPSKSQRS*TWVQSKPRVACPWW Trigger: CCACCACGGGCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAACCATCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | CTGCAGCTTCTCAAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTaGCTGGCCCTTCTCATAGCCCTGTACGAACACTCGTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLKDFLLGLELLI*LALLIALYEHSFTR Trigger: CCTGGTGAACGAGTGTTCGTACAGGGCTATGAGAAGGGCCAGCCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTTGAGAAGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | AAAGAGGACATGCTTGATGAAGGACAGAACCCCGTTGTTCTCCACATTGCCGGGCAGGGGGCTTTCATGTaGTCCAGGTATGCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEDMLDEGQNPVVLHIAGQGAFM*SRYAWR Trigger: CCTCCATGCATACCTGGACAACATGAAAGCCCCCTG...CCCGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR CAA 90 bp | GCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCCCAAGAGAGCCACAGGAGGCTTCTGCTTaGAAGGATCTGGGTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ACLGSVQSSQIKGTPREPQEASA*KDLGRQ Trigger: CTGCCTACCCAGATCCTTCAAAGCAGAAGCCTCCTG...TGGCTCTCTTGGGGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 90 bp | GTTCTTCTTTGGGCACAAACTGTACGAGGCCGCTCACCACAGTCCTaGGTTCAGCTTCCCCCACATCAATCTTCTCCACATAAAGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLWAQTVRGRSPQS*VQLPPHQSSPHKGY Trigger: ATAGCCTTTATGTGGAGAAGATTGATGTGGGGGAAGCTGAACCCAGGACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCAAAGAAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | CCTTCCGATCAAGGAGGTCGATTTTGGACTCCTCTTCTGACGAGCTCATTTTGCCTGCTGCTTTCCAGCTaGGCACTTGTGTCTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSDQGGRFWTPLLTSSFCLLLSS*ALVSVS Trigger: GCTTACAGACACAAGTGCCAAGCTGGAAAGCAGCAG...GCAAAATGAGCTCGTCAGAAGAGGAGTCCAAAATCGACCTCCTTGATCGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS GCA 90 bp | GGAGACGAATCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTGTaGGATGCACTCCTCAGAAATTTTAAAGTCGGCCTGCAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDESQLGHEVGLLPL*DALLRNFKVGLQLL Trigger: GAGAAGCTGCAGGCCGACTTTAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCACCCCACTTCTCATCTCTCAGGATCACAAACTCAGACTTGAGGGGAAATTTCTTGGCGTCGTGTaGTGTGACCACAGAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSTPLLISQDHKLRLEGKFLGVV*CDHRGQ Trigger: CTGTCCTCTGTGGTCACACAACACGACGCCAAGAAA...TTTCCCCTCAAGTCTGAGTTTGTGATCCTGAGAGATGAGAAGTGGGGTGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGTCCACGCTGAGGATTTaGCCCACACGGATATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILKKAPQFQSISILLLTQSTLRI*PTRISS Trigger: GCTGGATATCCGTGTGGGCAAAATCCTCAGCGTGGA...CTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGGACATGCTTGATGAAGGACAGAACCCCGTTGTTCTCCACATTGCCGGCCGTGTGCCTATATTaGCATACATGGGCACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GKRTCLMKDRTPLFSTLPAVCLY*HTWAHN Trigger: ATTGTGTGCCCATGTATGCAAATATAGGCACACGGC...CGGCAATGTGGAGAACAACGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS GCA 90 bp | CAGGTATGCATGGAGGTCTGCAAACAGGATGGTTACCTCACACCCTaGCTTCAAAAAGTCAGCGATCTTGGACATGGGTACAAAGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QVCMEVCKQDGYLTP*LQKVSDLGHGYKVS Trigger: GCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAACCATCCTGTTTGCAGACCTCCATGCATACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | ATTCTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGGGAAAGAGGACATGCTaGATGAAGGACAGAACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ILKKAPQFQSISILLLTQGKRTC*MKDRTP Trigger: CGGGGTTCTGTCCTTCATCAAGCATGTCCTCTTTCC...CTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | CTAACACAGCTGGCTTGTTTAGGGAGTGTCCAATCTAGCCAGATCAAGGGAACCATCACAAACTCAGACTaGAGGGGAAAGAGGACATGC | + |
|
Preference number: 5 (lower is better) Translates to: LTQLACLGSVQSSQIKGTITNSD*RGKRTC Trigger: GCATGTCCTCTTTCCCCTCAAGTCTGAGTTTGTGAT...GGTTCCCTTGATCTGGCTAGATTGGACACTCCCTAAACAAGCCAGCTGTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | ATTCTGAAGAAAGCTCCACAGTTTCAGTCCATCTCCATCCTGCTGCTAACACAGAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILKKAPQFQSISILLLTQSLVMK*VCFHCA Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...CTGTGTTAGCAGCAGGATGGAGATGGACTGAAACTGTGGAGCTTTCTTCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 90 bp | AGTGATTTACAGGAGACGAATCCCAGCTTGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCACTCCTCAGAAATTTTAAAGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SDLQETNPSLVMKLV*FHCAMHSSEILKSA Trigger: GGCCGACTTTAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS-3UTR CAA 90 bp | AGAAAGCCTTTTCAGACACTTTATTTGAACTTGACAGTGGCGGTTAGGGATTTGTCTGGTTCTGAGTTCTaGGCAGGGCCTTTGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKPFQTLYLNLTVAVRDLSGSEF*AGPLAG Trigger: TCCTGCCAAAGGCCCTGCCAAGAACTCAGAACCAGA...CAAATCCCTAACCGCCACTGTCAAGTTCAAATAAAGTGTCTGAAAAGGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS TCA 90 bp | TACCCCCTTTTAGTGATTTACAGGAGACGAATCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: YPLLVIYRRRIPAWS*SWFASTVRCTPQKF Trigger: AAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACTAAAAGGGGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 72 bp | GGCGGCTCACCCCTTCTACAGAAGCACACAGTAGCATaGCCTGCGAGTCCACGCCTCTCATCTTCTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGSPLLQKHTVA*PASPRLSSSGV Trigger: AACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGCTACTGTGTGCTTCTGTAGAAGGGGTGAGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | ACAGCACCACCACCAGCCTGTCCTGCAGTTCTTCTTTaGGCACAAACTGTACGAGGCCGCTCACCACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAPPPACPAVLL*AQTVRGRSPQS Trigger: GGACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | AGTAGCATGCCCTGCGAGTCCACGCCTCTCATCTTCTaGGGTTTCAGATTGCACAGCACCACCACCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSMPCESTPLIF*GFRLHSTTTSL Trigger: CAGGCTGGTGGTGGTGCTGTGCAATCTGAAACCCCAGAAGATGAGAGGCGTGGACTCGCAGGGCATGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
||
| CDS CAA 72 bp | TGTTCCACCTGCTTCACAACCTCAGCCCCCGCTTTCTaGGCGTCGTGTTGTGTGACCACAGAGGACAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSTCFTTSAPAF*ASCCVTTEDSR Trigger: CCGACTGTCCTCTGTGGTCACACAACACGACGCCAAGAAAGCGGGGGCTGAGGTTGTGAAGCAGGTGGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | CACAGCACCACCACCAGCCTGTCCTGCAGTTCTTCTTaGGGCACAAACTGTACGAGGCCGCTCACCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSTTTSLSCSSS*GTNCTRPLTTV Trigger: GACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | AGCAAAGGGTGTTCCACCTGCTTCACAACCTCAGCCCCCGCTTTCTaGGCGTCGTGTTGTGTGACCACAGAGGACAGTCGGTACACATCC | + |
|
Preference number: 6 (lower is better) Translates to: SKGCSTCFTTSAPAF*ASCCVTTEDSRYTS Trigger: GGATGTGTACCGACTGTCCTCTGTGGTCACACAACACGACGCCAAGAAAGCGGGGGCTGAGGTTGTGAAGCAGGTGGAACACCCTTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | CGGATATCCAGCCGGGATGGGATGACTTCCTCTGGTTCTGAGTTCTaGGCAGGGCCTTTGGCAGGAGGCTTCTGCTTTGAAGGATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RISSRDGMTSSGSEF*AGPLAGGFCFEGSG Trigger: CCCAGATCCTTCAAAGCAGAAGCCTCCTGCCAAAGGCCCTGCCAAGAACTCAGAACCAGAGGAAGTCATCCCATCCCGGCTGGATATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS TCA 72 bp | GATATCCAGCCGGGATGGGATGACTTCCTCTGGTTCTaGGTTCTTGGCAGGGCCTTTGGCAGGAGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DIQPGWDDFLWF*VLGRAFGRRLL Trigger: CAGAAGCCTCCTGCCAAAGGCCCTGCCAAGAACTCAGAACCAGAGGAAGTCATCCCATCCCGGCTGGATATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | TTCCACCTGCTTCACAACCTCAGCCCCCGCTTTCTTGGCGTCGTGTaGTGTGACCACAGAGGACAGTCGGTACACATCCAGTGTGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: FHLLHNLSPRFLGVV*CDHRGQSVHIQCVL Trigger: GAGTACACACTGGATGTGTACCGACTGTCCTCTGTGGTCACACAACACGACGCCAAGAAAGCGGGGGCTGAGGTTGTGAAGCAGGTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | TTCAGATTGCACAGCACCACCACCAGCCTGTCCTGCAGTTCTTCTTaGGGCACAAACTGTACGAGGCCGCTCACCACAGTCCTGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: FRLHSTTTSLSCSSS*GTNCTRPLTTVLGS Trigger: TGAACCCAGGACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGTGCAATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 72 bp | GGTTTCAGATTGCACAGCACCACCACCAGCCTGTCCTaGAGTTCTTCTTTGGGCACAAACTGTACGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GFRLHSTTTSLS*SSSLGTNCTRP Trigger: CGGCCTCGTACAGTTTGTGCCCAAAGAAGAACTGCAGGACAGGCTGGTGGTGGTGCTGTGCAATCTGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | AGCGATCTTGGACATGGGTACAAAGTAAGCCACGTGTaGCTTGCCCGTGGTGGCCGTGCCCCAGTAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: SDLGHGYKVSHV*LARGGRAPVNF Trigger: AAAGTTTACTGGGGCACGGCCACCACGGGCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | TGGGCACAAACTGTACGAGGCCGCTCACCACAGTCCTaGGTTCAGCTTCCCCCACATCAATCTTCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: WAQTVRGRSPQS*VQLPPHQSSPH Trigger: ATGTGGAGAAGATTGATGTGGGGGAAGCTGAACCCAGGACTGTGGTGAGCGGCCTCGTACAGTTTGTGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | AGCCGGGATGGGATGACTTCCTCTGGTTCTGAGTTCTaGGCAGGGCCTTTGGCAGGAGGCTTCTGCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SRDGMTSSGSEF*AGPLAGGFCFE Trigger: TTCAAAGCAGAAGCCTCCTGCCAAAGGCCCTGCCAAGAACTCAGAACCAGAGGAAGTCATCCCATCCCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | CTATCTGCATCTGGGTGCTTCTCCACGCTGAGGATTTaGCCCACACGGATATCCAGCCGGGATGGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: LSASGCFSTLRI*PTRISSRDGMT Trigger: AGTCATCCCATCCCGGCTGGATATCCGTGTGGGCAAAATCCTCAGCGTGGAGAAGCACCCAGATGCAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | CACACCCTGCCTTCAAAAAGTCAGCGATCTTGGACATaGGTACAAAGTAAGCCACGTGTGGCTTGCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: HTLPSKSQRSWT*VQSKPRVACPW Trigger: CCACGGGCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 72 bp | GGGGGCTTTCATGTTGTCCAGGTATGCATGGAGGTCTaGAAACAGGATGGTTACCTCACACCCTGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GGFHVVQVCMEV*KQDGYLTPCLQ Trigger: TTGAAGGCAGGGTGTGAGGTAACCATCCTGTTTGCAGACCTCCATGCATACCTGGACAACATGAAAGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | CTCAAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTaGCTGGCCCTTCTCATAGCCCTGTACGAACACTCG | + |
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Preference number: 6 (lower is better) Translates to: LKDFLLGLELLI*LALLIALYEHS Trigger: CGAGTGTTCGTACAGGGCTATGAGAAGGGCCAGCCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | TTAAAGTCGGCCTGCAGCTTCTCAAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCTGGCTGGCCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LKSACSFSKTFF*GLSSSSGWPFS Trigger: TGAGAAGGGCCAGCCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTTGAGAAGCTGCAGGCCGACTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | GTCTTCAGAGGAACCCTTATCGTGAGCCTGCTGCTGCTTTCCAGCTaGGCACTTGTGTCTGTAAGCCGTGTGCCTATATTTGCATACATG | + |
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Preference number: 6 (lower is better) Translates to: VFRGTLIVSLLLLSS*ALVSVSRVPIFAYM Trigger: CATGTATGCAAATATAGGCACACGGCTTACAGACACAAGTGCCAAGCTGGAAAGCAGCAGCAGGCTCACGATAAGGGTTCCTCTGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133992.8 |
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| CDS GCA 72 bp | ATGGAGGTCTGCAAACAGGATGGTTACCTCACACCCTaGCTTCAAAAAGTCAGCGATCTTGGACATGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: MEVCKQDGYLTP*LQKVSDLGHGY Trigger: GTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAACCATCCTGTTTGCAGACCTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 72 bp | TTCCCCCACATCAATCTTCTCCACATAAAGGCTATCTaGATCTGGGTGCTTCTCCACGCTGAGGATTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FPHINLLHIKAI*IWVLLHAEDFA Trigger: GGCAAAATCCTCAGCGTGGAGAAGCACCCAGATGCAGATAGCCTTTATGTGGAGAAGATTGATGTGGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CCA 72 bp | TTACCTCACACCCTGCCTTCAAAAAGTCAGCGATCTTaGACATGGGTACAAAGTAAGCCACGTGTGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LPHTLPSKSQRS*TWVQSKPRVAC Trigger: GCAAGCCACACGTGGCTTACTTTGTACCCATGTCCAAGATCGCTGACTTTTTGAAGGCAGGGTGTGAGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | GATTTACAGGAGACGAATCCCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: DLQETNPSLVMK*VCFHCAMHSSE Trigger: TTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | CCCCCTTTTAGTGATTTACAGGAGACGAATCCCAGCTaGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATG | + |
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Preference number: 6 (lower is better) Translates to: PPFSDLQETNPS*VMKLVCFHCAM Trigger: CATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACTAAAAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | CTGATGTTACCCCCTTTTAGTGATTTACAGGAGACGAATCCCAGCTaGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATGCACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LMLPPFSDLQETNPS*VMKLVCFHCAMHSS Trigger: TGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACTAAAAGGGGGTAACATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | TTCAGGGCTGGAGTATTAAACTTCTCTCTAATGGGGTCCAGCAACTaGTTCAGGGCGACTTCAACAGAATTCTTTAGGTCTCCAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: FRAGVLNFSLMGSSN*FRATSTEFFRSPGC Trigger: ACACCCTGGAGACCTAAAGAATTCTGTTGAAGTCGCCCTGAACAAGTTGCTGGACCCCATTAGAGAGAAGTTTAATACTCCAGCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS TCA 72 bp | TTAGTGATTTACAGGAGACGAATCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACTGTGCGATGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LVIYRRRIPAWS*SWFASTVRCTP Trigger: AGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS GCA 72 bp | CAGGAGACGAATCCCAGCTTGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCACTCCTCAGAAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: QETNPSLVMKLV*FHCAMHSSEIL Trigger: TAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 90 bp | CCTTTTAGTGATTTACAGGAGACGAATCCCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PFSDLQETNPSLVMK*VCFHCAMHSSEILK Trigger: CTTTAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGATTCGTCTCCTGTAAATCACTAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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| CDS CAA 72 bp | GGAGTATTAAACTTCTCTCTAATGGGGTCCAGCAACTaGTTCAGGGCGACTTCAACAGAATTCTTTAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GVLNFSLMGSSN*FRATSTEFFRS Trigger: AGACCTAAAGAATTCTGTTGAAGTCGCCCTGAACAAGTTGCTGGACCCCATTAGAGAGAAGTTTAATACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106054.4 |
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