Pregenerated sensors for YAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053110Ensembl transcript IDs: ENSMUST00000065353.13, ENSMUST00000086580.12, ENSMUST00000173085.8, ENSMUST00000173264.8, ENSMUST00000174577.2, ENSMUST00000174604.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTACCTGTATGCTACCTACTACAGCCAGGAAGCATTAAACACTGCTaGACACAACAAGAAAGACTACGTTCAGGCCGTGATTCAAATTTA | + |
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Preference number: 1 (lower is better) Translates to: LPVCYLLQPGSIKHC*TQQERLRSGRDSNL Trigger: TAAATTTGAATCACGGCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTGTAGTAGGTAGCATACAGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGCCTTTCAACAGCTCATaGCCACCTCCCCTCCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQPFNSS*PPPLPL Trigger: GAGGGGGAGGGGAGGTGGGCATGAGCTGTTGAAAGG...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCTGTTGTCACCACAGTaGACAGAGGGCAAGAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLLLSPQ*TEGKRR Trigger: GCGCCTCTTGCCCTCTGTGCACTGTGGTGACAACAG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGGGCAGAAGGCAGGCCTaGCTCTCTAAAGCTTACAGC | + |
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Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLGRRQA*LSKAYS Trigger: GCTGTAAGCTTTAGAGAGGCAGGCCTGCCTTCTGCC...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGTTATTCTGCAGCTGCTaGCCAATCATAGGCGCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQLFCSC*PIIGAR Trigger: CCGAGCGCCTATGATTGGCCAGCAGCTGCAGAATAA...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CAA 90 bp | TGGGTCCCCTCCGTCCTCCACGAGATCAGACGCAATGCCTCTGGCTaGTTGGACCCAAGGCAGCTGAAGAAACCACCTCTTGAACAATGT | + |
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Preference number: 2 (lower is better) Translates to: WVPSVLHEIRRNASG*LDPRQLKKPPLEQC Trigger: ACATTGTTCAAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCGTGGAGGACGGAGGGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGCCTTTATTCTGCAGCTaGTGGCCAATCATAGGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQPLFCS*WPIIGA Trigger: AGCGCCTATGATTGGCCAGCAGCTGCAGAATAAAGG...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | CTTTATCTAGCTTGGTGGCAGCCAACACAGACTCCACGTCCAAGATTTCGGAACTCGGGGAAGCGGCTCTaGTGTGACGGCAGGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LYLAWWQPTQTPRPRFRNSGKRL*CDGRVL Trigger: AAGCACCCTGCCGTCACAGCAGAGCCGCTTCCCCGA...GTTCCGAAATCTTGGACGTGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGCCAAAAGAATGGTATTaGCCACCCCAAGCTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQPKEWY*PPQATA Trigger: AGCTGTAGCTTGGGGTGGGCAATACCATTCTTTTGG...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCCAAAAGAATGGTATTaGCCACCCCAAGCTACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLPKEWY*PPQATA Trigger: AGCTGTAGCTTGGGGTGGGCAATACCATTCTTTTGG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCGCCATCCTTTATTCTaGAGCTGCTGGCCAATCATA | + |
|
Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLRHPLF*SCWPII Trigger: TATGATTGGCCAGCAGCTGCAGAATAAAGGATGGCG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR TCA 90 bp | CTTTATCTAGCTTGGTGGCAGCCAACACAGACTCCACGTCCAAGATTTCGGAACGCAGGGTGCTTTGGCTaGTGGTGTCTCCTGTATCCA | + |
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Preference number: 2 (lower is better) Translates to: LYLAWWQPTQTPRPRFRNAGCFG*WCLLYP Trigger: TGGATACAGGAGACACCATCAGCCAAAGCACCCTGC...GTTCCGAAATCTTGGACGTGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGGTCAATGGCCTCAAATaGCTGACCTATGAATCACAT | + |
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Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLVNGLK*LTYESH Trigger: ATGTGATTCATAGGTCAGTCATTTGAGGCCATTGAC...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGTCAAACACCTGCAATTaGTCCAACCAGAATTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQSNTCN*SNQNLK Trigger: CTTTAAATTCTGGTTGGAGCAATTGCAGGTGTTTGA...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGAACAACGATGGACACTaGTTCATCTGTTTTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLNNDGH*FICFLC Trigger: ACACAGAAAACAGATGAACCAGTGTCCATCGTTGTT...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAATGGACCCAAGGCAGCTaGAGAAACCACCTCTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSKAYSSDTTWHEIRLREWTQGS*RNHLLN Trigger: GTTCAAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCA...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGTCTACTTCATTCTTGTaGTATACTAAATCAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VSMEGLIRSESTVRHQGLSTSFL*YTKSKG Trigger: GCCCTTTGATTTAGTATAGCACAAGAATGAAGTAGA...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCGGCAGAAGGCAGGCCTaGCTCTCTAAAGCTTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: TEVLAGATIIHNQLLLHSGRRQA*LSKAYS Trigger: GCTGTAAGCTTTAGAGAGGCAGGCCTGCCTTCTGCC...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAAAAGGCCACTCACTGTTaGCTTCTGTTGTCACCACAG | + |
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Preference number: 2 (lower is better) Translates to: LSKAYSSDTTWHEIRLREKATHC*LLLSPQ Trigger: CTGTGGTGACAACAGAAGCCAACAGTGAGTGGCCTT...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCTGGACCCAAGGCAGCTaGAGAAACCACCTCTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TEVLAGATIIHNQLLLHSWTQGS*RNHLLN Trigger: GTTCAAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCA...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTCGCTAACAGAAGAATaGAAAGTTCACCAGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QPGSIKHCWTQQERLRSGSLTEE*KVHQSS Trigger: TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTCAAACACCTGCAATTaGTCCAACCAGAATTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPGSIKHCWTQQERLRSGSNTCN*SNQNLK Trigger: CTTTAAATTCTGGTTGGAGCAATTGCAGGTGTTTGA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCTCGCTAACAGAAGAATaGAAAGTTCACCAGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: TEVLAGATIIHNQLLLHSSLTEE*KVHQSS Trigger: TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGA...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | CCCCTCCGTCCTCCACGAGATCAGACGCAATGCCTCTaGCTTGTTGGACCCAAGGCAGCTGAAGAAACCACC | + |
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Preference number: 3 (lower is better) Translates to: PLRPPRDQTQCL*LVGPKAAEETT Trigger: GGTGGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCGTGGAGGACGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR TCA 72 bp | AGAGAGCACTGTCAGGCACCAGGGGCTGCTGGACATTaGGGTATAACAAGGCGCACCATGCTGAGGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: REHCQAPGAAGH*GITRRTMLREE Trigger: CTCCTCCCTCAGCATGGTGCGCCTTGTTATACCTCAATGTCCAGCAGCCCCTGGTGCCTGACAGTGCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | GCCCACAGAAGACGCCATCCTTTATTCTGCAGCTGCTaGCCAATCATAGGCGCTCGGCACGCCTATCATCTG | + |
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Preference number: 3 (lower is better) Translates to: AHRRRHPLFCSC*PIIGARHAYHL Trigger: CAGATGATAGGCGTGCCGAGCGCCTATGATTGGCCAGCAGCTGCAGAATAAAGGATGGCGTCTTCTGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR GCA 72 bp | TCTGCCCACAGAAGACGCCATCCTTTATTCTGCAGCTaGTGGCCAATCATAGGCGCTCGGCACGCCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: SAHRRRHPLFCS*WPIIGARHAYH Trigger: ATGATAGGCGTGCCGAGCGCCTATGATTGGCCAGCAGCTGCAGAATAAAGGATGGCGTCTTCTGTGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | GGTCACTATGGCCTAACGGCATCGCTAACAGAAGAATaGAAAGTTCACCAGTCTTCAGCGTGGGTCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: GHYGLTASLTEE*KVHQSSAWVPS Trigger: GGAGGGGACCCACGCTGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | ATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTaGGGGAGGTTAAGCAGCTGCAAACTTAGGAACTTC | + |
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Preference number: 3 (lower is better) Translates to: MLREEEDGTSTL*GRLSSCKLRNF Trigger: GAAGTTCCTAAGTTTGCAGCTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | CTAACAGAAGAATGGAAAGTTCACCAGTCTTCAGCGTaGGTCCCCTCCGTCCTCCACGAGATCAGACGCAAT | + |
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Preference number: 3 (lower is better) Translates to: LTEEWKVHQSSA*VPSVLHEIRRN Trigger: ATTGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTTTCCATTCTTCTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | TGTATCCATTTCATCCACACTGTTGAGGAAGTCGTCTaGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: CIHFIHTVEEVV*GPRDAVAAHAE Trigger: CTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTGGATGAAATGGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAAGGCAAGAGGCGCCTCTaGGCTTTACCCACTAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LSKAYSSDTTWHEIRLREGKRRL*ALPTRA Trigger: GGCTCTAGTGGGTAAAGCCAAGAGGCGCCTCTTGCC...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCTCAAACACCTGCAATaGCTCCAACCAGAATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VSMEGLIRSESTVRHQGLLKHLQ*LQPEFK Trigger: TTTAAATTCTGGTTGGAGCAATTGCAGGTGTTTGAG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CAA 90 bp | CTTTATCTAGCTTGGTGGCAGCCAACACAGACTCCACGTCCAAGATTTCGGAACATTTCATCCACACTGTaGAGGAAGTCGTCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LYLAWWQPTQTPRPRFRNISSTL*RKSSGV Trigger: GACCCCAGACGACTTCCTCAACAGTGTGGATGAAAT...GTTCCGAAATCTTGGACGTGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| 3UTR TCA 72 bp | GACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTaGAGAAACCACCTCTTGAACAATGTTCTAGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: DAMPLACWTQGS*RNHLLNNVLEH Trigger: ATGCTCTAGAACATTGTTCAAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR GCA 72 bp | GACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGCTaGAAACTTAGGAACTTCTTTACTGAGAGCGAGATA | + |
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Preference number: 3 (lower is better) Translates to: DGTSTLWGRLSS*KLRNFFTESEI Trigger: TATCTCGCTCTCAGTAAAGAAGTTCCTAAGTTTGCAGCTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR CCA 72 bp | AAGAGCAGCGACGGGCAGAGAAAAGCGGAACAACGATaGACACTGGTTCATCTGTTTTCTGTGTTAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KSSDGQRKAEQR*TLVHLFSVLAR Trigger: TCTGGCTAACACAGAAAACAGATGAACCAGTGTCCATCGTTGTTCCGCTTTTCTCTGCCCGTCGCTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAACACTGTTGGCTTCTGTaGTCACCACAGTGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LSKAYSSDTTWHEIRLREHCWLL*SPQCTE Trigger: CTCTGTGCACTGTGGTGACAACAGAAGCCAACAGTG...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAAACCAAAAGAATGGTATaGCCCACCCCAAGCTACAGC | + |
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Preference number: 3 (lower is better) Translates to: LSKAYSSDTTWHEIRLRETKRMV*PTPSYS Trigger: GCTGTAGCTTGGGGTGGGCAATACCATTCTTTTGGT...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR GCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCGAGTCCCCGCGGACGTaGACGACCTGGTGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVESPRT*TTWWPA Trigger: GGCCGGCCACCAGGTCGTGCACGTCCGCGGGGACTC...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR GCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGAGTCCCCGCGGACGTaGACGACCTGGTGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCESPRT*TTWWPA Trigger: GGCCGGCCACCAGGTCGTGCACGTCCGCGGGGACTC...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR GCA 90 bp | GGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCATCGAGTCCCCGCGGACGTaGACGACCTGGTGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPRDAVAAHAEAAVCALIESPRT*TTWWPA Trigger: GGCCGGCCACCAGGTCGTGCACGTCCGCGGGGACTC...GATGAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR GCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCCCGGAGATGCTGAGCTaGAGGGGCAGCGGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVPEMLS*RGSGRA Trigger: GGCCCTGCCGCTGCCCCTGCAGCTCAGCATCTCCGG...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR CCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTCGTCTGGGGCACCGCTaGGCTGGCAGGCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCRLGHR*AGRRRN Trigger: GTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACG...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR CCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCCGTCTGGGGCACCGCTaGGCTGGCAGGCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALRLGHR*AGRRRN Trigger: GTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACG...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGACTGCCGGAGATGCTaGGCTGCAGGGGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCDCRRC*AAGAAA Trigger: TGCCGCTGCCCCTGCAGCTCAGCATCTCCGGCAGTC...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGGAGTCCCCGCGGACGTaGACGACCTGGTGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQESPRT*TTWWPA Trigger: GGCCGGCCACCAGGTCGTGCACGTCCGCGGGGACTC...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCCCGGAGATGCTGAGCTaGAGGGGCAGCGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAPEMLS*RGSGRA Trigger: GGCCCTGCCGCTGCCCCTGCAGCTCAGCATCTCCGG...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGACTGCCGGAGATGCTaGGCTGCAGGGGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEADCRRC*AAGAAA Trigger: TGCCGCTGCCCCTGCAGCTCAGCATCTCCGGCAGTC...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCACCGGAGATGCTGAGCTaGAGGGGCAGCGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDAPEMLS*RGSGRA Trigger: GGCCCTGCCGCTGCCCCTGCAGCTCAGCATCTCCGG...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCACGTCTGGGGCACCGCTaGGCTGGCAGGCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDARLGHR*AGRRRN Trigger: GTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACG...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCGAAACGGCACCCAGCTaGAGGGAGGCTGGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVETAPS*REAGEE Trigger: CTCCTCTCCAGCCTCCCTGCAGCTGGGTGCCGTTTC...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTCCGGAGATGCTGAGCTaGAGGGGCAGCGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHAPEMLS*RGSGRA Trigger: GGCCCTGCCGCTGCCCCTGCAGCTCAGCATCTCCGG...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCGCTGCTGGTTGGAACTaGCTCCACCCAGGACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALAAGWN*LHPGRL Trigger: GAGGCGTCCTGGGTGGAGGCAGTTCCAACCAGCAGC...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGGACTGCCGGAGATGCTaGGCTGCAGGGGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSMEGLIRSESTVRHQGLDCRRC*AAGAAA Trigger: TGCCGCTGCCCCTGCAGCTCAGCATCTCCGGCAGTC...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGACTGCCGGAGATGCTaGGCTGCAGGGGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHADCRRC*AAGAAA Trigger: TGCCGCTGCCCCTGCAGCTCAGCATCTCCGGCAGTC...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGCTGGTTGGAACTaGCTCCACCCAGGACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAAAGWN*LHPGRL Trigger: GAGGCGTCCTGGGTGGAGGCAGTTCCAACCAGCAGC...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTTGCGAAGCCGCATaGGCACGGTCTGAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAACEAA*ARSEAR Trigger: ACGTGCCTCAGACCGTGCCCATGCGGCTTCGCAAGC...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCATCGCTTGCGAAGCCGCATaGGCACGGTCTGAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRDAVAAHAEAAVCALIACEAA*ARSEAR Trigger: ACGTGCCTCAGACCGTGCCCATGCGGCTTCGCAAGC...GATGAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTCAGTTGCGAAAGCATaGCCTTCCGGGGGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVSVAKA*PSGGPA Trigger: GGCAGGACCCCCGGAAGGCCATGCTTTCGCAACTGA...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCGAATTCATCAGCGTCTaGGGCACCGCTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVEFISV*GTAGLA Trigger: TGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTC...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGAATTCATCAGCGTCTaGGGCACCGCTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCEFISV*GTAGLA Trigger: TGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTC...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCAGAAGCGGCTCTGCTGTaGCGGCAGGGTGCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDAEAALL*RQGALA Trigger: AGCCAAAGCACCCTGCCGTCACAGCAGAGCCGCTTC...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGCTTGCGAAGCCGCATaGGCACGGTCTGAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHAACEAA*ARSEAR Trigger: ACGTGCCTCAGACCGTGCCCATGCGGCTTCGCAAGC...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTTTTGCTGCTGCTGGTTaGAACTGCCTCCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCFAAAG*NCLHPG Trigger: TCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAA...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCCTGGAGCACTCTGAGTaGTCCTCTGGTTCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVVWGPRDAVAAHAEAAVLEHSE*SSGSWQ Trigger: TTGCCATGAACCAGAGGATCACTCAGAGTGCTCCAG...GACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCCTGGAGCACTCTGAGTaGTCCTCTGGTTCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALLEHSE*SSGSWQ Trigger: TTGCCATGAACCAGAGGATCACTCAGAGTGCTCCAG...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | ACTTATCTGAATTTCAGGCGTGCACATCTTAGGCTCTGTGGATCCCTCACAGACGAGTCCCCGCGGACGTaGACGACCTGGTGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYLNFRRAHLRLCGSLTDESPRT*TTWWPA Trigger: GGCCGGCCACCAGGTCGTGCACGTCCGCGGGGACTC...GTCTGTGAGGGATCCACAGAGCCTAAGATGTGCACGCCTGAAATTCAGATAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CGAGATCAGACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTGAAGAAACCGAAACGGCACCCAGCTaGAGGGAGGCTGGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDQTQCLWLVGPKAAEETETAPS*REAGEE Trigger: CTCCTCTCCAGCCTCCCTGCAGCTGGGTGCCGTTTC...GGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCAGAACTCAGCGCTTCCTaGAGACTGGGCATCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDAELSAS*RLGISS Trigger: GGAGCTGATGCCCAGTCTGCAGGAAGCGCTGAGTTC...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTTCAGTTGCGAAAGCATaGCCTTCCGGGGGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHASVAKA*PSGGPA Trigger: GGCAGGACCCCCGGAAGGCCATGCTTTCGCAACTGA...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCTTTGCTGCTGCTGGTTaGAACTGCCTCCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAFAAAG*NCLHPG Trigger: TCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAA...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCCTGGAGCACTCTGAGTaGTCCTCTGGTTCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEALEHSE*SSGSWQ Trigger: TTGCCATGAACCAGAGGATCACTCAGAGTGCTCCAG...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCTTCACTGGAGCACTCTaGGTGATCCTCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALFTGAL*VILWFM Trigger: CATGAACCAGAGGATCACTCAGAGTGCTCCAGTGAA...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGGCAGGGTGCTTTGGCTaGTGGTGTCTCCTGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQAGCFG*WCLLYP Trigger: TGGATACAGGAGACACCATCAGCCAAAGCACCCTGC...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALSCICC*WLELPP Trigger: TGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCT...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCSCICC*WLELPP Trigger: TGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCT...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCTGCTGCAGCTGTATTTaGTGCTGCTGGTTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALCCSCI*CCWLEL Trigger: CAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCA...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| 3UTR CAA 72 bp | CAGAGAGCACTGTCAGGCACCAGGGGCTGCTGGACATaGAGGTATAACAAGGCGCACCATGCTGAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRALSGTRGCWT*RYNKAHHAEGG Trigger: TCCTCCCTCAGCATGGTGCGCCTTGTTATACCTCAATGTCCAGCAGCCCCTGGTGCCTGACAGTGCTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCTTCACTGGAGCACTCTaGGTGATCCTCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAFTGAL*VILWFM Trigger: CATGAACCAGAGGATCACTCAGAGTGCTCCAGTGAA...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| 3UTR CAA 72 bp | GCTAAGGGAAGTAAGGCCACTCACTGTTGGCTTCTGTaGTCACCACAGTGCACAGAGGGCAAGAGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKGSKATHCWLL*SPQCTEGKRRL Trigger: GAGGCGCCTCTTGCCCTCTGTGCACTGTGGTGACAACAGAAGCCAACAGTGAGTGGCCTTACTTCCCTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCAGACTGCCGGAGATGCTaGGCTGCAGGGGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSDCRRC*AAGAAA Trigger: TGCCGCTGCCCCTGCAGCTCAGCATCTCCGGCAGTC...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCTGGAGCACTCTGAGTaGTCCTCTGGTTCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSMEGLIRSESTVRHQGLLEHSE*SSGSWQ Trigger: TTGCCATGAACCAGAGGATCACTCAGAGTGCTCCAG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CTTTATCTAGCTTGGTGGCAGCCAACACAGACTCCACGTCCAAGATTTCGGAACGAAACGGCACCCAGCTaGAGGGAGGCTGGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLAWWQPTQTPRPRFRNETAPS*REAGEE Trigger: CTCCTCTCCAGCCTCCCTGCAGCTGGGTGCCGTTTC...GTTCCGAAATCTTGGACGTGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCAAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDASCICC*WLELPP Trigger: TGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCT...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTCATCTGTTTTCTGTGTTAGCCAGAGAACCCCCACTGACTTATCTGAACGTCTGGGGCACCGCTaGGCTGGCAGGCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSVFCVSQRTPTDLSERLGHR*AGRRRN Trigger: GTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACG...TTCAGATAAGTCAGTGGGGGTTCTCTGGCTAACACAGAAAACAGATGAACCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CGAGATCAGACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTGAAGAAACCGTTGAGGAAGTCGTCTaGGGTCCGAGGGATGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RDQTQCLWLVGPKAAEETVEEVV*GPRDAV Trigger: TACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC...GGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCTACTGTCTGACATTTTaGAGCATTTGCTGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGPRDAVAAHAEAAVCALYCLTF*SICCAG Trigger: CCCAGCACAGCAAATGCTCCAAAATGTCAGACAGTA...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173264.8 |
||
| 3UTR CAA 72 bp | TCCGTCCTCCACGAGATCAGACGCAATGCCTCTGGCTaGTTGGACCCAAGGCAGCTGAAGAAACCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLHEIRRNASG*LDPRQLKKPPL Trigger: AAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCGTGGAGGACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| 3UTR CAA 72 bp | ACCATGCTGAGGGAGGAGGAAGACGGCACATCCACCTaGTGGGGGAGGTTAAGCAGCTGCAAACTTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TMLREEEDGTST*WGRLSSCKLRN Trigger: GTTCCTAAGTTTGCAGCTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CGAGATCAGACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTGAAGAAACCCTGGAGCACTCTGAGTaGTCCTCTGGTTCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDQTQCLWLVGPKAAEETLEHSE*SSGSWQ Trigger: TTGCCATGAACCAGAGGATCACTCAGAGTGCTCCAG...GGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTTTCACTGGAGCACTCTaGGTGATCCTCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHAFTGAL*VILWFM Trigger: CATGAACCAGAGGATCACTCAGAGTGCTCCAGTGAA...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR TCA 90 bp | CGAGATCAGACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTGAAGAAACCTTTCATCCACACTGTTaGGGAAGTCGTCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDQTQCLWLVGPKAAEETFHPHC*GSRLGS Trigger: GGACCCCAGACGACTTCCTCAACAGTGTGGATGAAA...GGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTTGCTGCAGCTGTATTTaGTGCTGCTGGTTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HTVEEVVWGPRDAVAAHACCSCI*CCWLEL Trigger: CAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCA...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR GCA 90 bp | ACTTATCTGAATTTCAGGCGTGCACATCTTAGGCTCTGTGGATCCCTCACAGACTCGGGGAAGCGGCTCTaGTGTGACGGCAGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYLNFRRAHLRLCGSLTDSGKRL*CDGRVL Trigger: AAGCACCCTGCCGTCACAGCAGAGCCGCTTCCCCGA...GTCTGTGAGGGATCCACAGAGCCTAAGATGTGCACGCCTGAAATTCAGATAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTCATCTGTTTTCTGTGTTAGCCAGAGAACCCCCACTGACTTATCTGAACTGGCCTGTCGCGAGTaGGACTTGGGCTCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSVFCVSQRTPTDLSELACRE*DLGSGG Trigger: GCCGCCTGAGCCCAAGTCCCACTCGCGACAGGCCAG...TTCAGATAAGTCAGTGGGGGTTCTCTGGCTAACACAGAAAACAGATGAACCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTAGCTTGGTGGCAGCCAACACAGACTCCACGTCCAAGATTTCGGAACGAATTCATCAGCGTCTaGGGCACCGCTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLAWWQPTQTPRPRFRNEFISV*GTAGLA Trigger: TGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTC...GTTCCGAAATCTTGGACGTGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCACTTTATCTAGCTTGGTaGCAGCCAACACAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDALYLAW*QPTQTP Trigger: TGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| 3UTR CAA 72 bp | GTCCTCCACGAGATCAGACGCAATGCCTCTGGCTTGTaGGACCCAAGGCAGCTGAAGAAACCACCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLHEIRRNASGL*DPRQLKKPPLE Trigger: TTCAAGAGGTGGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCGTGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| 3UTR CAA 72 bp | AGGGTGCTTAAATCTCCCACAGTCAGCATGGAGGGTTaGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLKSPTVSMEG*IRSESTVRHQG Trigger: CCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGACTGTGGGAGATTTAAGCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CGAGATCAGACGCAATGCCTCTGGCTTGTTGGACCCAAGGCAGCTGAAGAAACCTTCACTGGAGCACTCTaGGTGATCCTCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RDQTQCLWLVGPKAAEETFTGAL*VILWFM Trigger: CATGAACCAGAGGATCACTCAGAGTGCTCCAGTGAA...GGTTTCTTCAGCTGCCTTGGGTCCAACAAGCCAGAGGCATTGCGTCTGATCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCCCAAGTCTTACTGTCTaGCATTTTGGAGCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAPSLTV*HFGAFA Trigger: AGCAAATGCTCCAAAATGTCAGACAGTAAGACTTGG...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173264.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCCCGGAGATGCTGAGCTaGAGGGGCAGCGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSPEMLS*RGSGRA Trigger: GGCCCTGCCGCTGCCCCTGCAGCTCAGCATCTCCGG...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCATCGGGGAAGCGGCTCTaGTGTGACGGCAGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSSGKRL*CDGRVL Trigger: AAGCACCCTGCCGTCACAGCAGAGCCGCTTCCCCGA...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTCAGTTGCGAAAGCATaGCCTTCCGGGGGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPGSIKHCWTQQERLRSGSVAKA*PSGGPA Trigger: GGCAGGACCCCCGGAAGGCCATGCTTTCGCAACTGA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | GTCAGCATGGAGGGTTTGATAAGGTCAGAGAGCACTGTCAGGCACCAGGGGCTGCGCAGAGCTAATTCCTaGCATTTTGGAGCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSMEGLIRSESTVRHQGLRRANS*HFGAFA Trigger: AGCAAATGCTCCAAAATGTCAGGAATTAGCTCTGCG...CAGCCCCTGGTGCCTGACAGTGCTCTCTGACCTTATCAAACCCTCCATGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065353.13 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTGTAGCTGCTCATGCTaGGGCCGCTGTCTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPGSIKHCWTQQERLRSGCSCSC*GRCLCS Trigger: AGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCGAACTCAGCGCTTCCTaGAGACTGGGCATCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPGSIKHCWTQQERLRSGELSAS*RLGISS Trigger: GGAGCTGATGCCCAGTCTGCAGGAAGCGCTGAGTTC...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAAGCTTGCGAAGCCGCATaGGCACGGTCTGAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKAYSSDTTWHEIRLREACEAA*ARSEAR Trigger: ACGTGCCTCAGACCGTGCCCATGCGGCTTCGCAAGC...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCATCAGTTGCGAAAGCATaGCCTTCCGGGGGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSSVAKA*PSGGPA Trigger: GGCAGGACCCCCGGAAGGCCATGCTTTCGCAACTGA...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCAGAATTCATCAGCGTCTaGGGCACCGCTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSEFISV*GTAGLA Trigger: TGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTC...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACCAGTCTTCAGCGTGGGTCCCCTCCGTCCTCCACGAGATCAGACGCATTTCTTTATCTAGCTTaGTGGCAGCCAACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KFTSLQRGSPPSSTRSDAFLYLA*WQPTQT Trigger: AGTCTGTGTTGGCTGCCACCAAGCTAGATAAAGAAA...TGCGTCTGATCTCGTGGAGGACGGAGGGGACCCACGCTGAAGACTGGTGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCATGTAGCTGCTCATGCTaGGGCCGCTGTCTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSCSCSC*GRCLCS Trigger: AGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACA...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCGCTGCTGGTTGGAACTaGCTCCACCCAGGACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSAAGWN*LHPGRL Trigger: GAGGCGTCCTGGGTGGAGGCAGTTCCAACCAGCAGC...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | ACTGGTTCATCTGTTTTCTGTGTTAGCCAGAGAACCCCCACTGACTTATCTGAAGCAGGGTGCTTTGGCTaGTGGTGTCTCCTGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSSVFCVSQRTPTDLSEAGCFG*WCLLYP Trigger: TGGATACAGGAGACACCATCAGCCAAAGCACCCTGC...TTCAGATAAGTCAGTGGGGGTTCTCTGGCTAACACAGAAAACAGATGAACCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTGCTGCAGCTGTATTTaGTGCTGCTGGTTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QPGSIKHCWTQQERLRSGCCSCI*CCWLEL Trigger: CAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | ACTTATCTGAATTTCAGGCGTGCACATCTTAGGCTCTGTGGATCCCTCACAGACTGCTGCAGCTGTATTTaGTGCTGCTGGTTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TYLNFRRAHLRLCGSLTDCCSCI*CCWLEL Trigger: CAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCA...GTCTGTGAGGGATCCACAGAGCCTAAGATGTGCACGCCTGAAATTCAGATAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAATTTGCTGCTGCTGGTTaGAACTGCCTCCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKAYSSDTTWHEIRLREFAAAG*NCLHPG Trigger: TCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAA...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR TCA 90 bp | ACTGGTTCATCTGTTTTCTGTGTTAGCCAGAGAACCCCCACTGACTTATCTGAATTTCATCCACACTGTTaGGGAAGTCGTCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSVFCVSQRTPTDLSEFHPHC*GSRLGS Trigger: GGACCCCAGACGACTTCCTCAACAGTGTGGATGAAA...TTCAGATAAGTCAGTGGGGGTTCTCTGGCTAACACAGAAAACAGATGAACCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCTTTGCTGCTGCTGGTTaGAACTGCCTCCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSFAAAG*NCLHPG Trigger: TCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAA...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCGTTGAGGAAGTCGTCTaGGGTCCGAGGGATGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSVEEVV*GPRDAV Trigger: TACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSSCICC*WLELPP Trigger: TGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCT...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCATTTCTTTATCTAGCTTaGTGGCAGCCAACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HYGLTASLTEEWKVHQSSFLYLA*WQPTQT Trigger: AGTCTGTGTTGGCTGCCACCAAGCTAGATAAAGAAA...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCCTTTATCTAGCTTGGTaGCAGCCAACACAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLAGATIIHNQLLLHSLYLAW*QPTQTP Trigger: TGGAGTCTGTGTTGGCTGCCACCAAGCTAGATAAAG...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCTTGGGCTCAGGCGGCTaGAAGAAGGAGTCGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGPRDAVAAHAEAAVCALLGSGG*KKESGS Trigger: GCTGCCCGACTCCTTCTTCAAGCCGCCTGAGCCCAA...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CAA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTTTGGGCTCAGGCGGCTaGAAGAAGGAGTCGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTVEEVVWGPRDAVAAHALGSGG*KKESGS Trigger: GCTGCCCGACTCCTTCTTCAAGCCGCCTGAGCCCAA...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCATTTGCTGCTGCTGGTaGGAACTGCCTCCACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VEEVVWGPRDAVAAHAEAICCCW*ELPPPR Trigger: CCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAAT...GGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCCTGCTGCAGCTGTATTaGCTGCTGCTGGTTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: WGPRDAVAAHAEAAVCALLLQLY*LLLVGT Trigger: AGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAG...GAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
||
| CDS GCA 90 bp | AGTCTCTCCTTCTCCATCTGTAACTGCTGCAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCACCCAGGACGCCTCCCTGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSFSICNCCSCICC*WLELPPPRTPPCGL Trigger: GAGCCCACAGGGAGGCGTCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAGTTACAGATGGAGAAGGAGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 ENSMUST00000174604.8 |
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| CDS-3UTR CAA 90 bp | CACACTGTTGAGGAAGTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTATTTGCTGCTGCTGGTaGGAACTGCCTCCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: HTVEEVVWGPRDAVAAHAICCCW*ELPPPR Trigger: CCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAAT...AGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGACTTCCTCAACAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR CAA 90 bp | GGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTGCTCTCATCCTGCTGCAGCTGTATTaGCTGCTGCTGGTTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: GPRDAVAAHAEAAVCALILLQLY*LLLVGT Trigger: AGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAG...GATGAGAGCACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 |
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| CDS-3UTR CAA 90 bp | GTCGTCTGGGGTCCGAGGGATGCTGTAGCTGCTCATGCTGAGGCCGCTGTCTGTTTTGCTGTGCTGGGATaGATATTCCGTATTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VVWGPRDAVAAHAEAAVCFAVLG*IFRIAC Trigger: GCAGGCAATACGGAATATCAATCCCAGCACAGCAAA...ACAGACAGCGGCCTCAGCATGAGCAGCTACAGCATCCCTCGGACCCCAGACGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173264.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCTTGGGCTCAGGCGGCTaGAAGAAGGAGTCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QPGSIKHCWTQQERLRSGLGSGG*KKESGS Trigger: GCTGCCCGACTCCTTCTTCAAGCCGCCTGAGCCCAA...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | CATGCTGAGGGAGGAGGAAGACGGCACATCCACCTTGTGGGGGAGGTTAAGCAGTTTGCTGTGCTGGGATaGATATTCCGTATTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: HAEGGGRRHIHLVGEVKQFAVLG*IFRIAC Trigger: GCAGGCAATACGGAATATCAATCCCAGCACAGCAAA...CTGCTTAACCTCCCCCACAAGGTGGATGTGCCGTCTTCCTCCTCCCTCAGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065353.13 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAAAACGAGGGTCCAGCCTaGGGTCCAGCCAGGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: LSKAYSSDTTWHEIRLRENEGPA*GPARMW Trigger: CCACATCCTGGCTGGACCCAAGGCTGGACCCTCGTT...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | ACTTATCTGAATTTCAGGCGTGCACATCTTAGGCTCTGTGGATCCCTCACAGACATTTGCTGCTGCTGGTaGGAACTGCCTCCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TYLNFRRAHLRLCGSLTDICCCW*ELPPPR Trigger: CCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAAT...GTCTGTGAGGGATCCACAGAGCCTAAGATGTGCACGCCTGAAATTCAGATAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCTTGGGCTCAGGCGGCTaGAAGAAGGAGTCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TEVLAGATIIHNQLLLHSLGSGG*KKESGS Trigger: GCTGCCCGACTCCTTCTTCAAGCCGCCTGAGCCCAA...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | ACTGGTTCATCTGTTTTCTGTGTTAGCCAGAGAACCCCCACTGACTTATCTGAAATTTGCTGCTGCTGGTaGGAACTGCCTCCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TGSSVFCVSQRTPTDLSEICCCW*ELPPPR Trigger: CCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAAT...TTCAGATAAGTCAGTGGGGGTTCTCTGGCTAACACAGAAAACAGATGAACCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGAAGCATTAAACACTGCTGGACACAACAAGAAAGACTACGTTCAGGCCTGCTGCAGCTGTATTaGCTGCTGCTGGTTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: QPGSIKHCWTQQERLRSGLLQLY*LLLVGT Trigger: AGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAG...GCCTGAACGTAGTCTTTCTTGTTGTGTCCAGCAGTGTTTAATGCTTCCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS GCA 90 bp | GGCTGCGCAGAGCTAATTCCAAGTCTTACTGTCTTAGGGACTTCCTaGCGAAATAATTCCTGTTGTTTCAACCGCAGTCTCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GCAELIPSLTVLGTS*RNNSCCFNRSLSFS Trigger: GGAGAAGGAGAGACTGCGGTTGAAACAACAGGAATTATTTCGGCAGGAAGTCCCTAAGACAGTAAGACTTGGAATTAGCTCTGCGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174577.2 |
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| CDS CCA 90 bp | AACTGGCTGCGCAGAGCTAATTCCAAGTCTTACTGTCTGACATTTTaGAGCATTTGCTGTGCTGGGATTGATATTCCGTATTGCCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: NWLRRANSKSYCLTF*SICCAGIDIPYCLP Trigger: CGGCAGGCAATACGGAATATCAATCCCAGCACAGCAAATGCTCCAAAATGTCAGACAGTAAGACTTGGAATTAGCTCTGCGCAGCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173264.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAACTGCTGCAGCTGTATTaGCTGCTGCTGGTTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: LSKAYSSDTTWHEIRLRELLQLY*LLLVGT Trigger: AGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAG...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCAATTTCATCCACACTGTaGAGGAAGTCGTCTGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: HYGLTASLTEEWKVHQSSISSTL*RKSSGV Trigger: GACCCCAGACGACTTCCTCAACAGTGTGGATGAAAT...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | CACTATGGCCTAACGGCATCGCTAACAGAAGAATGGAAAGTTCACCAGTCTTCACTTTCTTTATCTAGCTaGGTGGCAGCCAACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: HYGLTASLTEEWKVHQSSLSLSS*VAANTD Trigger: GTCTGTGTTGGCTGCCACCAAGCTAGATAAAGAAAG...TGAAGACTGGTGAACTTTCCATTCTTCTGTTAGCGATGCCGTTAGGCCATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAAGCTTACAGCTCAGACACTACATGGCATGAAATCAGGCTAAGGGAACTTTCTTTATCTAGCTaGGTGGCAGCCAACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: LSKAYSSDTTWHEIRLRELSLSS*VAANTD Trigger: GTCTGTGTTGGCTGCCACCAAGCTAGATAAAGAAAG...TTCCCTTAGCCTGATTTCATGCCATGTAGTGTCTGAGCTGTAAGCTTTAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTGCTAGCTGGTGCCACTATAATTCATAACCAACTATTACTTCATAGCATTTCATCCACACTGTaGAGGAAGTCGTCTGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TEVLAGATIIHNQLLLHSISSTL*RKSSGV Trigger: GACCCCAGACGACTTCCTCAACAGTGTGGATGAAAT...GCTATGAAGTAATAGTTGGTTATGAATTATAGTGGCACCAGCTAGCACCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 |
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| CDS CCA 72 bp | TCAGGAAGAGGTCCTGAGGCAGAATTCATCAGCGTCTaGGGCACCGCTGGGCTGGCAGGCGCAGGAACGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGRGPEAEFISV*GTAGLAGAGTF Trigger: GAACGTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTCTGCCTCAGGACCTCTTCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 ENSMUST00000174604.8 |
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| CDS CCA 72 bp | AGGCAGAATTCATCAGCGTCTGGGGCACCGCTGGGCTaGCAGGCGCAGGAACGTTCAGTTGCGAAAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: RQNSSASGAPLG*QAQERSVAKAW Trigger: CCATGCTTTCGCAACTGAACGTTCCTGCGCCTGCCAGCCCAGCGGTGCCCCAGACGCTGATGAATTCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 ENSMUST00000174604.8 |
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| CDS GCA 72 bp | TTCTCCATCTGTAACTGCTGCAGCTGTATTTGCTGCTaGTGGTTGGAACTGCCTCCACCCAGGACGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FSICNCCSCICC*WLELPPPRTPP Trigger: GGGAGGCGTCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAGTTACAGATGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 ENSMUST00000174604.8 |
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| CDS GCA 72 bp | CTCTCCTTCTCCATCTGTAACTGCTGCAGCTGTATTTaGTGCTGCTGGTTGGAACTGCCTCCACCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: LSFSICNCCSCI*CCWLELPPPRT Trigger: CGTCCTGGGTGGAGGCAGTTCCAACCAGCAGCAGCAAATACAGCTGCAGCAGTTACAGATGGAGAAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065353.13 ENSMUST00000086580.12 ENSMUST00000173085.8 ENSMUST00000173264.8 ENSMUST00000174577.2 ENSMUST00000174604.8 |
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| CDS TCA 72 bp | ACTGGCTGCGCAGAGCTAATTCCAAGTCTTACTGTCTaGCATTTTGGAGCATTTGCTGTGCTGGGATTGATA | + |
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Preference number: 6 (lower is better) Translates to: TGCAELIPSLTV*HFGAFAVLGLI Trigger: TATCAATCCCAGCACAGCAAATGCTCCAAAATGTCAGACAGTAAGACTTGGAATTAGCTCTGCGCAGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173264.8 |
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| CDS GCA 72 bp | GCATTTGCTGTGCTGGGATTGATATTCCGTATTGCCTaGCGAAATAATTCCTGTTGTTTCAACCGCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AFAVLGLIFRIA*RNNSCCFNRSL Trigger: GAGACTGCGGTTGAAACAACAGGAATTATTTCGGCAGGCAATACGGAATATCAATCCCAGCACAGCAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065353.13 ENSMUST00000173264.8 ENSMUST00000174604.8 |
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