Pregenerated sensors for YAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022634Ensembl transcript IDs: ENSMUST00000080299.7, ENSMUST00000133736.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTTCTCCCCGCGGCGAGGAGGACCTGGACACACCCCGCTCAGTaGTGTCCGAGCTGCAGCTGCCCTGGCTGTGCTGATCGCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RLLPAARRTWTHPAQ*CPSCSCPGCADRQQ Trigger: CTGCTGGCGATCAGCACAGCCAGGGCAGCTGCAGCTCGGACAGCACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGCGGGGAGAAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 90 bp | TTCTCTTTCTTCGACTGGGTAGGGGGCACGAACTGCTGCGTGACCTaGTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTCCTTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: FSFFDWVGGTNCCVT*CATSWETGRGFLPE Trigger: CTCAGGAAGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 90 bp | CGGTCTTTCTTCTCTTTCTTCGACTGGGTAGGGGGCACGAACTGCTaGGTGACCTGCTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSFFSFFDWVGGTNC*VTCCATSWETGRGF Trigger: GAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAAGAAAGACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 90 bp | ACTCGGTCTTTCTTCTCTTTCTTCGACTGGGTAGGGGGCACGAACTaGTGCGTGACCTGCTGTGCGACCAGCTGGGAGACAGGGCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: TRSFFSFFDWVGGTN*CVTCCATSWETGRG Trigger: GCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAAGAAAGACCGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 90 bp | GCGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTaGTTCTTTAACTCTAATGTCTTAGAGGATGCAGGAAATACCAGT | + |
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Preference number: 1 (lower is better) Translates to: AFASMASSFLLLPDA*FFNSNVLEDAGNTS Trigger: ACTGGTATTTCCTGCATCCTCTAAGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR CCA 90 bp | GGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTTGCAAGTATaGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAACT | + |
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Preference number: 1 (lower is better) Translates to: GDSDKTIIKLERLQV*QVLSCFCQMLASLT Trigger: AGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGTTGAGGGAGGAGGCTTCTCCCCGCGGCGAGGAGGACCTGGACACACCCCGCTGCGTGACCTGCTGTaGGACCAGCTGGGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SVEGGGFSPRRGGPGHTPLRDLL*DQLGDR Trigger: CCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAG...CGGGGTGTGTCCAGGTCCTCCTCGCCGCGGGGAGAAGCCTCCTCCCTCAACGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGAGGCTTCTCCCCGCGGCGAGGAGGACCTGGACACACCCCGCTCAGTGGTAGGGGGCACGAACTaGTGCGTGACCTGCTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: REEASPRGEEDLDTPRSVVGGTN*CVTCCA Trigger: CGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTAC...CACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGCGGGGAGAAGCCTCCTCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGAGGCTTCTCCCCGCGGCGAGGAGGACCTGGACACACCCCGCTCAGTGTTAGATCTCCAACAGTaGCTTCCAAATGCTGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: REEASPRGEEDLDTPRSVLDLQQ*LPNAER Trigger: GCGCTCAGCATTTGGAAGTCACTGTTGGAGATCTAA...CACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGCGGGGAGAAGCCTCCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGATCGCGGCGAGGAGGACCTaGACACACCCCGCTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LRGCRKYQCSTTTALTLIAARRT*THPAQC Trigger: GCACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGC...GATCAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGCTGCCCTGGCTGTGCTaGTCGCCAGCAGCGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRCIKRITIKKILLQLPWLC*SPAALD Trigger: GTCCAGCGCTGCTGGCGATCAGCACAGCCAGGGCAG...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGATCAGTGAGACTCTCCGTTaGGGGAGGAGGCTTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LRGCRKYQCSTTTALTLISETLR*GRRLLP Trigger: GGGGAGAAGCCTCCTCCCTCAACGGAGAGTCTCACT...GATCAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGGTGACTTCCAAATGCTaGGCGCTACTCCGATCCACA | + |
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Preference number: 2 (lower is better) Translates to: PSTSRCIKRITIKKILLQVTSKC*ALLRST Trigger: TGTGGATCGGAGTAGCGCTCAGCATTTGGAAGTCAC...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGTTCAACGACAACAGCGCTAACCCTGATCAGAAAGCTAAACAAGCCACGGTTCTTTCCTGCTTCTaGCAGATGCTTGCTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: PVFNDNSANPDQKAKQATVLSCF*QMLASL Trigger: TAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAAC...CGTGGCTTGTTTAGCTTTCTGATCAGGGTTAGCGCTGTTGTCGTTGAACACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTCTGGTTTTCTTGTGACAGTTCTTTTTGCTAGCAGCTTCCTTCTCACTGTTGTTGGCATACTCTaGATCTCCATGGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SWSGFLVTVLFASSFLLTVVGIL*ISMEDR Trigger: CCTGTCCTCCATGGAGATGCAGAGTATGCCAACAAC...AGTGAGAAGGAAGCTGCTAGCAAAAAGAACTGTCACAAGAAAACCAGACCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTTCAACGACAACAGCGCTAACCCTGATCAGAAAGCTAAACAAGCCACGTCAACCACATTTTCATaGCATTTAACAGCAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PVFNDNSANPDQKAKQATSTTFS*HLTAET Trigger: GGTCTCTGCTGTTAAATGCCATGAAAATGTGGTTGA...CGTGGCTTGTTTAGCTTTCTGATCAGGGTTAGCGCTGTTGTCGTTGAACACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCTATTTAATCACACCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTGTTGTTGGCATACTCTaGATCTCCATGGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSYLITPSTSRCIKRITIVVGIL*ISMEDR Trigger: CCTGTCCTCCATGGAGATGCAGAGTATGCCAACAAC...AATGGTTATCCTCTTAATGCACCTGCTGGTACTTGGTGTGATTAAATAGGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGGAGCGTTTGCAAGTATaGCAAGTTCTTTCCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRCIKRITIKKILLQERLQV*QVLSCF Trigger: GAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTC...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR CAA 90 bp | TTGGAACAGGGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTaGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LEQGDSDKTIIKLER*QVWQVLSCFCQMLA Trigger: AGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAACTCTAATGTCTCCAAGTACCAGCAGGTaGATTAAGAGGATAACCATT | + |
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Preference number: 2 (lower is better) Translates to: WQVLSCFCQMLASLTLMSPSTSR*IKRITI Trigger: AATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG...AGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAACTCTAATGTCTCTTCTGCCAGATGCTTaGTTCTTTAACTCTAATGTC | + |
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Preference number: 2 (lower is better) Translates to: WQVLSCFCQMLASLTLMSLLPDA*FFNSNV Trigger: GACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAG...AGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGTCAACCACATTTTCATaGCATTTAACAGCAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRCIKRITIKKILLQSTTFS*HLTAET Trigger: GGTCTCTGCTGTTAAATGCCATGAAAATGTGGTTGA...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAACAGGGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTTGCAAGTAGGTCTGGTTTTCTTGTaGCAGTTCTTTTTGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LEQGDSDKTIIKLERLQVGLVFL*QFFLLA Trigger: TGCTAGCAAAAAGAACTGTCACAAGAAAACCAGACC...TACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 72 bp | CCCGCGGCGAGGAGGACCTGGACACACCCCGCTCAGTaGTGTCCGAGCTGCAGCTGCCCTGGCTGTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: PAARRTWTHPAQ*CPSCSCPGCAD Trigger: ATCAGCACAGCCAGGGCAGCTGCAGCTCGGACAGCACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 72 bp | TTCGACTGGGTAGGGGGCACGAACTGCTGCGTGACCTaGTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: FDWVGGTNCCVT*CATSWETGRGF Trigger: GAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR CCA 72 bp | GGCACGAACTGCTGCGTGACCTGCTGTGCGACCAGCTaGGAGACAGGGCGTGGCTTCCTTCCTGAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GTNCCVTCCATS*ETGRGFLPERG Trigger: TCCCCTCTCAGGAAGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR TCA 72 bp | CTAAGTGGAGCAAGAACGGTTAGTGAGACTCTCCGTTaGGGGAGGAGGCTTCTCCCCGCGGCGAGGAGGACC | + |
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Preference number: 3 (lower is better) Translates to: LSGARTVSETLR*GRRLLPAARRT Trigger: GGTCCTCCTCGCCGCGGGGAGAAGCCTCCTCCCTCAACGGAGAGTCTCACTAACCGTTCTTGCTCCACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 72 bp | TTCTTCTCTTTCTTCGACTGGGTAGGGGGCACGAACTaGTGCGTGACCTGCTGTGCGACCAGCTGGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: FFSFFDWVGGTN*CVTCCATSWET Trigger: TGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR CCA 72 bp | TCCTTCTCTACTCGGTCTTTCTTCTCTTTCTTCGACTaGGTAGGGGGCACGAACTGCTGCGTGACCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SFSTRSFFSFFD*VGGTNCCVTCC Trigger: ACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAAGAAAGACCGAGTAGAGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR TCA 72 bp | TGTTGGCATACTCTGCATCTCCATGGAGGACAGGCATaGCTAAGTGGAGCAAGAACGGTTAGTGAGACTCTC | + |
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Preference number: 3 (lower is better) Translates to: CWHTLHLHGGQA*LSGARTVSETL Trigger: GAGAGTCTCACTAACCGTTCTTGCTCCACTTAGTCATGCCTGTCCTCCATGGAGATGCAGAGTATGCCAACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAACAGGGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTTGCAAGTAGACGCAGGCGCTGACTaGGCTTTCTCCTTAAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LEQGDSDKTIIKLERLQVDAGAD*AFSLKS Trigger: AGACTTTAAGGAGAAAGCCAAGTCAGCGCCTGCGTC...TACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| 3UTR GCA 72 bp | AGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTaGTTCTTTAACTCTAATGTCTTAGAGGATGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SMASSFLLLPDA*FFNSNVLEDAG Trigger: TCCTGCATCCTCTAAGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR TCA 90 bp | CTTCGACTGGGTAGGGGGCACGAACTGCTGCGTGACCTGCTGTGCGACCAGCTGCGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LRLGRGHELLRDLLCDQLRTSCT*RPRRCS Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...CAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | GAACTGCTGCGTGACCTGCTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTCCTTGGATCGGGTGGAGGTaGCCTTCCGCACATCGCACA | + |
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Preference number: 4 (lower is better) Translates to: ELLRDLLCDQLGDRAWLPWIGWR*PSAHRT Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGATCCA...AGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| CDS-3UTR CCA 90 bp | GAACTGCTGCGTGACCTGCTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTCCTAGAATGTGGATCGGGTaGAGGTGCCCTTCCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: ELLRDLLCDQLGDRAWLPRMWIG*RCPSAH Trigger: ATGTGCGGAAGGGCACCTCCACCCGATCCACATTCT...AGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | CCAGTGTTCAACGACAACAGCGCTAACCCTGATCAGAAAGCTAAACAAGCCACGGAGGCGGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PVFNDNSANPDQKAKQATEAGFG*RFGLVG Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCCGCCTC...CGTGGCTTGTTTAGCTTTCTGATCAGGGTTAGCGCTGTTGTCGTTGAACACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGGAGGCGGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CLRGCRKYQCSTTTALTLEAGFG*RFGLVG Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCCGCCTC...CAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | CCAGTGTTCAACGACAACAGCGCTAACCCTGATCAGAAAGCTAAACAAGCCACGGCTTCCGGGTGGAGGTaGCCTTCCGCACATCGCACA | + |
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Preference number: 4 (lower is better) Translates to: PVFNDNSANPDQKAKQATASGWR*PSAHRT Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGGAAGC...CGTGGCTTGTTTAGCTTTCTGATCAGGGTTAGCGCTGTTGTCGTTGAACACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGCAGTGCTGTCCGAGCTaGAGCTGCCCTGGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLRGCRKYQCSTTTALTLQCCPS*SCPGCA Trigger: AGCACAGCCAGGGCAGCTGCAGCTCGGACAGCACTG...CAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTAGAGCGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTGCCCTGGCTGTGCTaGTCGCCAGCAGCGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: IKLERLQVWQVLSCFCQMLPWLC*SPAALD Trigger: GTCCAGCGCTGCTGGCGATCAGCACAGCCAGGGCAG...CATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | CGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAGGGGGCACGAACTGCTaGGTGACCTGCTGTGCGACC | + |
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Preference number: 4 (lower is better) Translates to: RLQVWQVLSCFCQMLASLGGTNC*VTCCAT Trigger: GGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCC...TAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | TTAGAGCGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTGTAGGGGGCACGAACTaGTGCGTGACCTGCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LERLQVWQVLSCFCQMLAVGGTN*CVTCCA Trigger: CGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTAC...AGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGCTGGGAGACAGGGCGTaGCTTCCGGGTGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSTSRCIKRITIKKILLQLGDRA*LPGGGA Trigger: GGCACCTCCACCCGGAAGCCACGCCCTGTCTCCCAG...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR CCA 90 bp | ATTAAGTTAGAGCGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: IKLERLQVWQVLSCFCQMAASAW*GSSCRP Trigger: TGGGCGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...CATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR CCA 90 bp | TGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAACTCTAATGTCTGGCGTGGCTTCCGGGTaGAGGTGCCCTTCCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: WQVLSCFCQMLASLTLMSGVASG*RCPSAH Trigger: ATGTGCGGAAGGGCACCTCCACCCGGAAGCCACGCC...AGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGCTGCGTGACCTGCTGTaGGACCAGCTGGGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSTSRCIKRITIKKILLQLRDLL*DQLGDR Trigger: CCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAG...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR TCA 90 bp | CCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTAAGAAAATCCTGTTGCAGCGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSTSRCIKRITIKKILLQRTSCT*RPRRCS Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...CTGCAACAGGATTTTCTTAATGGTTATCCTCTTAATGCACCTGCTGGTACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGGTGACTTCCAAATGCTaGGCGCTACTCCGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: CLRGCRKYQCSTTTALTLVTSKC*ALLRST Trigger: TGTGGATCGGAGTAGCGCTCAGCATTTGGAAGTCAC...CAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR CCA 90 bp | GCTGACTTAGGAGTGACACCTCAGTTCTGTGTAATAGTTACATGTTTATATCAAGCGGCGAGGAGGACCTaGACACACCCCGCTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ADLGVTPQFCVIVTCLYQAARRT*THPAQC Trigger: GCACTGAGCGGGGTGTGTCCAGGTCCTCCTCGCCGC...TTGATATAAACATGTAACTATTACACAGAACTGAGGTGTCACTCCTAAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR TCA 90 bp | TGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTAACTCTAATGTCTGCTGGACGCAGGCGCTaGCTTGGCTTTCTCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: WQVLSCFCQMLASLTLMSAGRRR*LGFLLK Trigger: TTTAAGGAGAAAGCCAAGTCAGCGCCTGCGTCCAGC...AGACATTAGAGTTAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | TTGGAACAGGGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTTGCAAGTATGTCCGAGCTGCAGCTaGCCTGGCTGTGCTGATCGC | + |
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Preference number: 4 (lower is better) Translates to: LEQGDSDKTIIKLERLQVCPSCS*PGCADR Trigger: GCGATCAGCACAGCCAGGGCAGCTGCAGCTCGGACA...TACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR TCA 90 bp | GCTGACTTAGGAGTGACACCTCAGTTCTGTGTAATAGTTACATGTTTATATCAAAGTGAGACTCTCCGTTaGGGGAGGAGGCTTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ADLGVTPQFCVIVTCLYQSETLR*GRRLLP Trigger: GGGGAGAAGCCTCCTCCCTCAACGGAGAGTCTCACT...TTGATATAAACATGTAACTATTACACAGAACTGAGGTGTCACTCCTAAGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR TCA 90 bp | CGTTTGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAGATGCTTGCTTCTTTATTAGATCTCCAACAGTaGCTTCCAAATGCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RLQVWQVLSCFCQMLASLLDLQQ*LPNAER Trigger: GCGCTCAGCATTTGGAAGTCACTGTTGGAGATCTAA...TAAAGAAGCAAGCATCTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR GCA 90 bp | GCTGACTTAGGAGTGACACCTCAGTTCTGTGTAATAGTTACATGTTTATATCAACGCTGTTCCGGAAGGTaGAGACACTGCAGTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ADLGVTPQFCVIVTCLYQRCSGR*RHCSPS Trigger: ACTGGGACTGCAGTGTCTGCACCTTCCGGAACAGCG...TTGATATAAACATGTAACTATTACACAGAACTGAGGTGTCACTCCTAAGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | TTGGAACAGGGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTTGCAAGTAGGAAGGTGCAGACACTaGAGTCCCAGTAGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LEQGDSDKTIIKLERLQVGRCRH*SPSSPH Trigger: ATGAGGGCTACTGGGACTGCAGTGTCTGCACCTTCC...TACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCCCTGTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR GCA 90 bp | GCTGACTTAGGAGTGACACCTCAGTTCTGTGTAATAGTTACATGTTTATATCAAGGAAGGTGCAGACACTaGAGTCCCAGTAGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ADLGVTPQFCVIVTCLYQGRCRH*SPSSPH Trigger: ATGAGGGCTACTGGGACTGCAGTGTCTGCACCTTCC...TTGATATAAACATGTAACTATTACACAGAACTGAGGTGTCACTCCTAAGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| 3UTR CAA 72 bp | GGAGACAGTGATAAAACTATCATTAAGTTAGAGCGTTaGCAAGTATGGCAAGTTCTTTCCTGCTTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GDSDKTIIKLER*QVWQVLSCFCQ Trigger: CTGGCAGAAGCAGGAAAGAACTTGCCATACTTGCAAACGCTCTAACTTAATGATAGTTTTATCACTGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR TCA 90 bp | ACTTCCTATTTAATCACACCAAGTACCAGCAGGTGCATTAAGAGGATAACCATTGGTCTGGTTTTCTTGTaGCAGTTCTTTTTGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: TSYLITPSTSRCIKRITIGLVFL*QFFLLA Trigger: TGCTAGCAAAAAGAACTGTCACAAGAAAACCAGACC...AATGGTTATCCTCTTAATGCACCTGCTGGTACTTGGTGTGATTAAATAGGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS GCA 90 bp | TTCTCTTTCTTCGACTGGGTAGGGGGCACGAACTGCTGCGTGACCTaGTGTGCGACCAGCTGGGAGACAGGGCGTGGCTTCCGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FSFFDWVGGTNCCVT*CATSWETGRGFRVE Trigger: CTCCACCCGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAGAAAGAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS-3UTR CAA 90 bp | CTTCGACTGGGTAGGGGGCACGAACTGCTGCGTGACCTGCTGTGCGACCAGCTGTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LRLGRGHELLRDLLCDQLSHIMH*KASALF Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...CAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCCCCCTACCCAGTCGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133736.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: CLRGCRKYQCSTTTALTLSHIMH*KASALF Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...CAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080299.7 ENSMUST00000133736.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAGGATGCAGGAAATACCAGTGTTCAACGACAACAGCGCTAACCCTGATCGACGCAGGCGCTGACTaGGCTTTCTCCTTAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LRGCRKYQCSTTTALTLIDAGAD*AFSLKS Trigger: AGACTTTAAGGAGAAAGCCAAGTCAGCGCCTGCGTC...GATCAGGGTTAGCGCTGTTGTCGTTGAACACTGGTATTTCCTGCATCCTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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| CDS CCA 72 bp | GGCACGAACTGCTGCGTGACCTGCTGTGCGACCAGCTaGGAGACAGGGCGTGGCTTCCGGGTGGAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GTNCCVTCCATS*ETGRGFRVEVP Trigger: GGGCACCTCCACCCGGAAGCCACGCCCTGTCTCCCAGCTGGTCGCACAGCAGGTCACGCAGCAGTTCGTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080299.7 |
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