Pregenerated sensors for YAE1D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075054Ensembl transcript IDs: ENSMUST00000099735.6, ENSMUST00000222796.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAATCTCAGGCCATGACACTCTGGTCACAGCTGCAGGGCACCCTTaGCTTCCCATCTACATTCACCTAGGGCCTCTTCATGAGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: AISGHDTLVTAAGHP*LPIYIHLGPLHETW Trigger: CCAGGTCTCATGAAGAGGCCCTAGGTGAATGTAGATGGGAAGGCAAGGGTGCCCTGCAGCTGTGACCAGAGTGTCATGGCCTGAGATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | CAGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCAGCTGTaGCCTTGCCTAACAGTGACCTTAGGAAGAGGCAGTGTGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: QASGQSDNISAMGQL*PCLTVTLGRGSVKR Trigger: CCTCTTCACACTGCCTCTTCCTAAGGTCACTGTTAGGCAAGGTCACAGCTGCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | TGTTGGCTGAGGAGGAAGGTCAGCTGGGTGCGTTCTGTGCCTCTCTaGTCTAGCAGCTTTGACCCCAGCATCTGGCTCCTGAGTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: CWLRRKVSWVRSVPL*SSSFDPSIWLLSLY Trigger: ATAAAGACTCAGGAGCCAGATGCTGGGGTCAAAGCTGCTAGATCAGAGAGGCACAGAACGCACCCAGCTGACCTTCCTCCTCAGCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR CCA 90 bp | GAGACAAAGCGGCCTGTGACATGGCCAAAAGTATCATGTTCCCCTTaGAGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCT | + |
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Preference number: 1 (lower is better) Translates to: ETKRPVTWPKVSCSP*RDRGLRASKEHTHP Trigger: AGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCTCCAAGGGGAACATGATACTTTTGGCCATGTCACAGGCCGCTTTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | CTGCTGACACAATCTCTTAATGTTCTGTGCGTTTTAAGCAGGGACTaGAACCAGGGGCCTTTACAAGGTCCTCCAGCCAGTCTCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLTQSLNVLCVLSRD*NQGPLQGPPASLSG Trigger: TCCTGAGAGACTGGCTGGAGGACCTTGTAAAGGCCCCTGGTTTCAGTCCCTGCTTAAAACGCACAGAACATTAAGAGATTGTGTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | GGCAGGTGTAAGTTTAGCTCTAGAGCCTGGGATAAAGATGGAAGCTaGACTGCTAGCTTAGTACAGTGGTTACTATGGGAGGGGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: GRCKFSSRAWDKDGS*TASLVQWLLWEGRS Trigger: TGATCTCCCCTCCCATAGTAACCACTGTACTAAGCTAGCAGTTCAGCTTCCATCTTTATCCCAGGCTCTAGAGCTAAACTTACACCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR CCA 90 bp | AGGGAGTCAGGACTTAGGATAGAGAGACATACAGGAAGTAGCGGGTaGGGCATTCAGCTTGAGGGTTTTTGGAGAAGGTATAGAGAACTT | + |
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Preference number: 1 (lower is better) Translates to: RESGLRIERHTGSSG*GIQLEGFWRRYREL Trigger: AAGTTCTCTATACCTTCTCCAAAAACCCTCAAGCTGAATGCCCCACCCGCTACTTCCTGTATGTCTCTCTATCCTAAGTCCTGACTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | AGAGCACAAACTCTGGGGCCAGACTTCTTTCACATTTCAGAGCTATaGGTTTGGGTTAAATTGCTCAGCCTGTCCCTTAGCTTAGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RAQTLGPDFFHISEL*VWVKLLSLSLSLVS Trigger: GGAAACTAAGCTAAGGGACAGGCTGAGCAATTTAACCCAAACTCATAGCTCTGAAATGTGAAAGAAGTCTGGCCCCAGAGTTTGTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR CCA 90 bp | AAAAAGTTATGGATGTGTCTGTGTAGCAGGTGCATGCATTGCCTATaGAGTCCAGATGTGGGCATCAAAGTCTCTGTAAGTGGAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: KKLWMCLCSRCMHCL*SPDVGIKVSVSGVT Trigger: TGTAACTCCACTTACAGAGACTTTGATGCCCACATCTGGACTCCATAGGCAATGCATGCACCTGCTACACAGACACATCCATAACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR GCA 90 bp | AGTTTTAAAAAGTTATGGATGTGTCTGTGTAGCAGGTGCATGCATTaGCTATGGAGTCCAGATGTGGGCATCAAAGTCTCTGTAAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: SFKKLWMCLCSRCMH*LWSPDVGIKVSVSG Trigger: TCCACTTACAGAGACTTTGATGCCCACATCTGGACTCCATAGGCAATGCATGCACCTGCTACACAGACACATCCATAACTTTTTAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR GCA 90 bp | CCAGATATAATAAGTCTGAAGAAAAACCAGCATTGCTTGCTTGCCTaGCTTCACTTCTTGTTGGTCAATGTGCTTTCTGTTGCTGCCGTT | + |
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Preference number: 1 (lower is better) Translates to: PDIISLKKNQHCLLA*LHFLLVNVLSVAAV Trigger: AACGGCAGCAACAGAAAGCACATTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTTTTTCTTCAGACTTATTATATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | AAAACAAGGGGAACAGAGAGAGCTCCTAGCTCCACTATTAAACACTaGCACTGCTACCATGTAATTAGTGAGCATCTATCAAGAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: KTRGTERAPSSTIKH*HCYHVISEHLSRAQ Trigger: TTGTGCTCTTGATAGATGCTCACTAATTACATGGTAGCAGTGTCAGTGTTTAATAGTGGAGCTAGGAGCTCTCTCTGTTCCCCTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR CCA 90 bp | ACTGTGAACCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTaGTTGTGGTATGGCTCAGTTCTCCAAGAGCTTTCTGCTTACTGT | + |
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Preference number: 1 (lower is better) Translates to: TVNPKIVLFIGKTCF*LWYGSVLQELSAYC Trigger: ACAGTAAGCAGAAAGCTCTTGGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGGTTCACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | ATGAATCCTTTAATGACAAATTTATCATATCAGGGCCGTTCCCCTTaGGAACCCAGTACAACTGCTCTCTGGGAAGACTTAGGAAATGTA | + |
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Preference number: 1 (lower is better) Translates to: MNPLMTNLSYQGRSP*EPSTTALWEDLGNV Trigger: TACATTTCCTAAGTCTTCCCAGAGAGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTGATATGATAAATTTGTCATTAAAGGATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | GTCATTCTTGCCACAAATGCACACTGTTGCAGGATATTTGAACTGTaGACCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: VILATNAHCCRIFEL*TPRLCYLLEKPVSG Trigger: ACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGGTTCACAGTTCAAATATCCTGCAACAGTGTGCATTTGTGGCAAGAATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | TTCTCTAGTCATTCTTGCCACAAATGCACACTGTTGCAGGATATTTaGACTGTGAACCCCAAGATTGTGCTATTTATTGGAAAAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: FSSHSCHKCTLLQDI*TVNPKIVLFIGKTC Trigger: ACAGGTTTTTCCAATAAATAGCACAATCTTGGGGTTCACAGTTCAAATATCCTGCAACAGTGTGCATTTGTGGCAAGAATGACTAGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | GGGGATTTGAGATTTCTAGACAGCAAAGTCTTGACTGGTAGTTTATaGACAGCATATGTTTATTTCATCTACTGGCCAAACTTGGGAATA | + |
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Preference number: 1 (lower is better) Translates to: GDLRFLDSKVLTGSL*TAYVYFIYWPNLGI Trigger: TATTCCCAAGTTTGGCCAGTAGATGAAATAAACATATGCTGTTCATAAACTACCAGTCAAGACTTTGCTGTCTAGAAATCTCAAATCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR TCA 90 bp | ACAAACAAACAATCCAGTGAAGATTTAACGATTTCTAGTTTTGGATaGGTCCAGATGCCATTAAGAGTCAAAACACAAACTGCAAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: TNKQSSEDLTISSFG*VQMPLRVKTQTAKS Trigger: ACTCTTTGCAGTTTGTGTTTTGACTCTTAATGGCATCTGGACTCATCCAAAACTAGAAATCGTTAAATCTTCACTGGATTGTTTGTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | GCTAACTTTGTGAACAGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCCCTAGGGCCTCTTCATaGGACCTGGCTGCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ANFVNRQVASLTTFRRWGPRASS*DLAASQ Trigger: CTGGGAGGCAGCCAGGTCTCATGAAGAGGCCCTAGG...GCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCTGTTCACAAAGTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCAGGGATACAGCAGGGTaGAGCAGCGCCACCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSRDTAG*SSATQW Trigger: CCACTGGGTGGCGCTGCTTCACCCTGCTGTATCCCT...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTGGGGCAAGCCAGCAAGTGCCTGCAATCTTCCAGGTCCCCCAAGCCCCATTTAATTTTGAAGTaGATAGTAGGTGTGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLGQASKCLQSSRSPKPHLILK*IVGVQQ Trigger: CTGCTGCACACCTACTATCCACTTCAAAATTAAATG...GGGCTTGGGGGACCTGGAAGATTGCAGGCACTTGCTGGCTTGCCCCAGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | GACCTGGCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGCAACAGTCAAGTAGATGGCTTGCTTGCTGGTaGAGAGGCCCTGATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: DLAASQHRKQSKRQQSSRWLACW*RGPDSN Trigger: GTTGGAATCAGGGCCTCTTCACCAGCAAGCAAGCCA...TCTACTTGACTGTTGCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGGTTTTAAGCAGGGACTaGAACCAGGGGCCTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: RDRGLRASKEHTHPTLLSVLSRD*NQGPLQ Trigger: TTGTAAAGGCCCCTGGTTTCAGTCCCTGCTTAAAAC...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGAAGAAAAACCAGCATTaGTTGCTTGCCTGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RDRGLRASKEHTHPTLLSKKNQH*LLACLH Trigger: GTGAAGGCAGGCAAGCAAGCAATGCTGGTTTTTCTT...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCAGCTGTGACCTTGCCTTTGTGTGTGGTGTATaGGTATATGTCTTTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RQVASLTTFRRWGSCDLAFVCGV*VYVFAC Trigger: GCAAGCAAAGACATATACCCATACACCACACACAAA...GGCAAGGTCACAGCTGCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | GCTAACTTTGTGAACAGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCCTCCTTTCCCGATCCTaGGTCATGGAACAAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: ANFVNRQVASLTTFRRWGLLSRS*VMEQKS Trigger: AGATTTTTGTTCCATGACCCAGGATCGGGAAAGGAG...GCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCTGTTCACAAAGTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACAGGAAGTAGCGGGTaGGGCATTCAGCTTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSTGSSG*GIQLEG Trigger: ACCCTCAAGCTGAATGCCCCACCCGCTACTTCCTGT...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCGAGAATACTTGGAACTaGCACTGGGCCCTGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSENTWN*HWALGR Trigger: TCTTCCCAGGGCCCAGTGTCAGTTCCAAGTATTCTC...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCCCTCTTCATGAGACCTaGCTGCCTCCCAGCATAGAA | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSPLHET*LPPSIE Trigger: TTCTATGCTGGGAGGCAGCCAGGTCTCATGAAGAGG...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCAGCTGTGACCTTGCCAATTTGGTCTTTATCTaGGTTTACCATGAAAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RQVASLTTFRRWGSCDLANLVFI*VYHESS Trigger: ACTGCTTTCATGGTAAACCCAGATAAAGACCAAATT...GGCAAGGTCACAGCTGCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR CAA 90 bp | AGTCTGAAGAAAAACCAGCATTGCTTGCTTGCCTGCCTTCACTTCTaGTTGGTCAATGTGCTTTCTGTTGCTGCCGTTACCACTCACACC | + |
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Preference number: 2 (lower is better) Translates to: SLKKNQHCLLACLHF*LVNVLSVAAVTTHT Trigger: GGTGTGAGTGGTAACGGCAGCAACAGAAAGCACATTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTTTTTCTTCAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCAGTTCTCCCAGGGCCGTTCCCCTTaGGAACCCAGTACAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: LCYLLEKPVSGCGMAQFSQGRSP*EPSTTA Trigger: AGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTG...GGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCAGTTGTTTGTGTGGGTaGGAGAGAAGCAGGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSSCLCG*ERSRIQ Trigger: CTGGATCCTGCTTCTCTCTCACCCACACAAACAACT...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTGAACGTAAATGCTTTTAACCATGGAGCTACAGCTTCAGCCCCTAACAGCACTGACACTGGGCCCTaGGAAGAGCAAGCAGTACTC | + |
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Preference number: 2 (lower is better) Translates to: KLNVNAFNHGATASAPNSTDTGP*EEQAVL Trigger: GAGTACTGCTTGCTCTTCCCAGGGCCCAGTGTCAGT...GCTGTTAGGGGCTGAAGCTGTAGCTCCATGGTTAAAAGCATTTACGTTCAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCAGTTCTCCGGGTGGCTAACTTTGTaGACAGGCAAGTGGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LCYLLEKPVSGCGMAQFSGWLTL*TGKWPV Trigger: GACTGGCCACTTGCCTGTTCACAAAGTTAGCCACCC...GGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTCTGGACCTGGCCTGCTaGGGCACCCTTTTTAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGLDLAC*GTLFKG Trigger: ACCCTTAAAAAGGGTGCCTCAGCAGGCCAGGTCCAG...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCCTCTGGGCAGGTCTTTaGGGGCATTCTCAAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSLWAGL*GHSQEL Trigger: TAATTCTTGAGAATGCCCTCAAAGACCTGCCCAGAG...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCTGTCTGTGTAGCAGGTaGATGCATTGCCTATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: MQLETQALGVLVSSYCCSCLCSR*MHCLWS Trigger: ACTCCATAGGCAATGCATGCACCTGCTACACAGACA...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCCTGTCGCTAACTTTATaGAGGGTCCCTCTGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PQDCAIYWKNLFLVVVWLLSLTL*RVPLVP Trigger: TGGAACCAGAGGGACCCTTCATAAAGTTAGCGACAG...GAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTTCCTTGTTCTAAAATaGTTGGCTTTTGCTAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LAFRLLLATLACLLVKRPFLVLK*LAFASL Trigger: TAGACTAGCAAAAGCCAAGCATTTTAGAACAAGGAA...GGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTGAACGTAAATGCTTTTAACCATGGAGCTACAGCTTCAGCCCCTAACAGCCTGGTGAAGAGGCCCTaGTTCCAACAAAAGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: KLNVNAFNHGATASAPNSLVKRP*FQQKQK Trigger: TTTCTGCTTTTGTTGGAATCAGGGCCTCTTCACCAG...GCTGTTAGGGGCTGAAGCTGTAGCTCCATGGTTAAAAGCATTTACGTTCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCAGTTCTCCCTCATGGTTCTCCTCTaGCACCAAGTCCATGAAACC | + |
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Preference number: 2 (lower is better) Translates to: LCYLLEKPVSGCGMAQFSLMVLL*HQVHET Trigger: GGTTTCATGGACTTGGTGTCAGAGGAGAACCATGAG...GGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATTGCAATCTCAGGCCATaGCACTCTGGTCACAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNCNLRP*HSGHSC Trigger: GCAGCTGTGACCAGAGTGTCATGGCCTGAGATTGCA...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR TCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTGCCAGGTGTAAGGCCTaGATCCTGGCATTTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGARCKA*ILAFGS Trigger: ACTTCCAAATGCCAGGATTCAGGCCTTACACCTGGC...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCTTTGACCCCAGCATCTaGCTCCTGAGTCTTTATTGG | + |
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Preference number: 2 (lower is better) Translates to: PQDCAIYWKNLFLVVVWLFDPSI*LLSLYW Trigger: CCAATAAAGACTCAGGAGCCAGATGCTGGGGTCAAA...GAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| 3UTR-3UTR GCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTTGTGTAGCAGGTGCATaGATTGCCTATGGAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGCVAGA*IAYGVQ Trigger: CTGGACTCCATAGGCAATGCATGCACCTGCTACACA...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTCTCTTCTTCCCCTCATaGTTCTCCTCTGACACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGLFFPS*FSSDTK Trigger: CTTGGTGTCAGAGGAGAACCATGAGGGGAAGAAGAG...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCAGTTCTCCGAGTTTTTCCTTGGTTaGACACTTGAGACAAAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LCYLLEKPVSGCGMAQFSEFFLG*TLETKR Trigger: CCGCTTTGTCTCAAGTGTGCAACCAAGGAAAAACTC...GGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCTTGTCTCTAGCATTGGCTAATGTATCTCTCTCTGACAGAGTTTTAAGAGCTAGCTTAGTACAGTaGTTACTATGGGAGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSLSLALANVSLSDRVLRASLVQ*LLWEGR Trigger: TCTCCCCTCCCATAGTAACCACTGTACTAAGCTAGC...TCTTAAAACTCTGTCAGAGAGAGATACATTAGCCAATGCTAGAGACAAGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 90 bp | AATGAATCCTTTAATGACAAATTTATCATATCAGGGCCGTTCCCCTaGAGAACCCAGTACAACTGCTCTCTGGGAAGACTTAGGAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: NESFNDKFIISGPFP*RTQYNCSLGRLRKC Trigger: ACATTTCCTAAGTCTTCCCAGAGAGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTGATATGATAAATTTGTCATTAAAGGATTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 90 bp | GTGAACCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTaGTGGTATGGCTCAGTTCTCCAAGAGCTTTCTGCTTACTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VNPKIVLFIGKTCFW*WYGSVLQELSAYCK Trigger: TTTACAGTAAGCAGAAAGCTCTTGGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGGTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR GCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATATCCCCAGCAAGTGGTaGATGGCTGCAAATAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNIPSKW*MAANKD Trigger: ATCTTTATTTGCAGCCATGCACCACTTGCTGGGGAT...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTAAAACCAGCATTGCTTaGTTGCCTGCCTTCACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGKTSIA*LPAFTS Trigger: AGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTTTT...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATCCCGATCCTGGGTCATaGAACAAAAATCTGACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNPDPGS*NKNLTV Trigger: CACAGTCAGATTTTTGTTCCATGACCCAGGATCGGG...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGAACGTAAATGCTTTTAACCATGGAGCTACAGCTTCAGCCCCTAACAGCGTGGCATCTTCACAATaGGGATTTGAGATTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: KLNVNAFNHGATASAPNSVASSQ*GFEISR Trigger: TCTAGAAATCTCAAATCCCCATTGTGAAGATGCCAC...GCTGTTAGGGGCTGAAGCTGTAGCTCCATGGTTAAAAGCATTTACGTTCAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTACATCTATGAGGGTGTaGCATCTTCACAATGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: EIITSHSLLLKALDALLGTSMRV*HLHNGD Trigger: ATCCCCATTGTGAAGATGCCACACCCTCATAGATGT...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 90 bp | AAATTGCTCAGCCTGTCCCTTAGCTTAGTTTCCTTGTCTCTAGCATaGGCTAATGTATCTCTCTCTGACAGAGTTTTAAGATGGACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLLSLSLSLVSLSLA*ANVSLSDRVLRWTK Trigger: TTTAGTCCATCTTAAAACTCTGTCAGAGAGAGATACATTAGCCAATGCTAGAGACAAGGAAACTAAGCTAAGGGACAGGCTGAGCAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATTCTATCCCCAGCAAGTaGTGCATGGCTGCAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNSIPSK*CMAANK Trigger: TTTATTTGCAGCCATGCACCACTTGCTGGGGATAGA...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATGGCCCCATCTCTTTGTaGCATCATAAACACTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNGPISL*HHKHFI Trigger: TATAAAGTGTTTATGATGTCACAAAGAGATGGGGCC...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATCAGTTTGAGAAAATGTaGCCAAGTCCTCATTACCTA | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNQFEKM*PSPHYL Trigger: TAGGTAATGAGGACTTGGCCACATTTTCTCAAACTG...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATACAGCCTTTTGTGTGTaGTGTATGGGTATATGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNTAFCV*CMGICL Trigger: AAGACATATACCCATACACCACACACAAAAGGCTGT...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATCTCCTTTACTGTTTCTaGTTGAACTACTCTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNLLYCF*LNYSRT Trigger: AGTTCTAGAGTAGTTCAACCAGAAACAGTAAAGGAG...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATAAACAGTATAAAAGCTaGGCAGTTGTCTATCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNKQYKS*AVVYPL Trigger: TAGAGGATAGACAACTGCTCAGCTTTTATACTGTTT...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATGCTGTGTTAAACCACTaGAATAGACTTGAGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNAVLNH*NRLEKL Trigger: CAATTTCTCAAGTCTATTTCAGTGGTTTAACACAGC...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR GCA 90 bp | CATCTGATTAGAGTCAAAACACCAAAAGGGTCCAAGAATGAAACCTCCAGAAATTTCCTTGTTCTAAAATaGTTGGCTTTTGCTAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVKTPKGSKNETSRNFLVLK*LAFASL Trigger: TAGACTAGCAAAAGCCAAGCATTTTAGAACAAGGAA...ATTTCTGGAGGTTTCATTCTTGGACCCTTTTGGTGTTTTGACTCTAATCAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR GCA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATATGGGTATATGTCTTTaGTTGCACACACAGAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: IHSYFLLLCRNLCISVQNMGICL*LHTQKI Trigger: TATCTTCTGTGTGTGCAAGCAAAGACATATACCCAT...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCTTGTCTCTAGCATTGGCTAATGTATCTCTCTCTGACAGAGTTTTAAGAAGTTTTAAAAAGTTATaGATGTGTCTGTGTAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSLSLALANVSLSDRVLRSFKKL*MCLCSR Trigger: CCTGCTACACAGACACATCCATAACTTTTTAAAACT...TCTTAAAACTCTGTCAGAGAGAGATACATTAGCCAATGCTAGAGACAAGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCAGCTGTGACCTTGCCTCTGGCAACTCTGGCTaGCTTGCTGGTGAAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RQVASLTTFRRWGSCDLASGNSG*LAGEEA Trigger: GGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGA...GGCAAGGTCACAGCTGCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | AGGAGGAAGGTCAGCTGGGTGCGTTCTGTGCCTCTCTaGTCTAGCAGCTTTGACCCCAGCATCTGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRKVSWVRSVPL*SSSFDPSIWLL Trigger: CAGGAGCCAGATGCTGGGGTCAAAGCTGCTAGATCAGAGAGGCACAGAACGCACCCAGCTGACCTTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | GGCCAGCAGCTCTCTGGAAATCTTCCAGGTCTTCAGTaGTGGACCTGGCCTGCTGAGGCACCCTTTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQQLSGNLPGLQ*WTWPAEAPFLR Trigger: CCTTAAAAAGGGTGCCTCAGCAGGCCAGGTCCAGCACTGAAGACCTGGAAGATTTCCAGAGAGCTGCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CTCTCTGGAAATCTTCCAGGTCTTCAGTGCTGGACCTaGCCTGCTGAGGCACCCTTTTTAAGGGTGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSGNLPGLQCWT*PAEAPFLRVSS Trigger: GCTGCTCACCCTTAAAAAGGGTGCCTCAGCAGGCCAGGTCCAGCACTGAAGACCTGGAAGATTTCCAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CAGCAGCTCTCTGGAAATCTTCCAGGTCTTCAGTGCTaGACCTGGCCTGCTGAGGCACCCTTTTTAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QQLSGNLPGLQC*TWPAEAPFLRV Trigger: CACCCTTAAAAAGGGTGCCTCAGCAGGCCAGGTCCAGCACTGAAGACCTGGAAGATTTCCAGAGAGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CCAGCAAGTTGTCCTCTGACCTTCACATTCAGGCCATaGCACCCCACACCCCCAGTAAATGTAAGAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PASCPLTFTFRP*HPTPPVNVRDC Trigger: GCAGTCTCTTACATTTACTGGGGGTGTGGGGTGCCATGGCCTGAATGTGAAGGTCAGAGGACAACTTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TTGCCTTCCCATCTACATTCACCTAGGGCCTCTTCATaGGACCTGGCTGCCTCCCAGCATAGAAAGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSHLHSPRASS*DLAASQHRKQS Trigger: GCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTCTCATGAAGAGGCCCTAGGTGAATGTAGATGGGAAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | AAATCTTCCAGGTCTTCAGTGCTGGACCTGGCCTGCTaGGGCACCCTTTTTAAGGGTGAGCAGCTACCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSSRSSVLDLAC*GTLFKGEQLPV Trigger: AACTGGTAGCTGCTCACCCTTAAAAAGGGTGCCTCAGCAGGCCAGGTCCAGCACTGAAGACCTGGAAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TACAGCCCAACGTCGGGGATAATCACTAGCTCCTTGTaGGAGAGGGCACAGGCAAAGGAAAGGGATACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSPTSGIITSSL*ERAQAKERDTA Trigger: TGCTGTATCCCTTTCCTTTGCCTGTGCCCTCTCTCACAAGGAGCTAGTGATTATCCCCGACGTTGGGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | CTTTCCTCTACAGGTGCCATCTCTGGCGTTTCCAGATaGCAGAAAAGGGTACTGGATCCCTTAGAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSTGAISGVSR*QKRVLDPLEPE Trigger: CTCTGGCTCTAAGGGATCCAGTACCCTTTTCTGGCATCTGGAAACGCCAGAGATGGCACCTGTAGAGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CCCATCTACATTCACCTAGGGCCTCTTCATGAGACCTaGCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PIYIHLGPLHET*LPPSIESKAKG Trigger: GCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTCTCATGAAGAGGCCCTAGGTGAATGTAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGGCCTGCCTTCACTTCTaGTTGGTCAATGTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RDRGLRASKEHTHPTLLSACLHF*LVNVLS Trigger: AGAAAGCACATTGACCAACAAGAAGTGAAGGCAGGC...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCTCTGATCTAGCAGCTTaGACCCCAGCATCTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MQLETQALGVLVSSYCCSSDLAA*TPASGS Trigger: GGAGCCAGATGCTGGGGTCAAAGCTGCTAGATCAGA...GGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTaGAGAGGCCCTGATTCCAACAAAAGCAGAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGYFWQLWLACW*RGPDSNKSRKQ Trigger: CTGCTTTCTGCTTTTGTTGGAATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| 3UTR CCA 72 bp | ACCAGCATTGCTTGCTTGCCTGCCTTCACTTCTTGTTaGTCAATGTGCTTTCTGTTGCTGCCGTTACCACTC | + |
|
Preference number: 3 (lower is better) Translates to: TSIACLPAFTSC*SMCFLLLPLPL Trigger: GAGTGGTAACGGCAGCAACAGAAAGCACATTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CTTGGTTGCACACTTGAGACAAAGCGGCCTGTGACATaGCCAAAAGTATCATGTTCCCCTTGGAGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGCTLETKRPVT*PKVSCSPWRDR Trigger: TCTGTCTCTCCAAGGGGAACATGATACTTTTGGCCATGTCACAGGCCGCTTTGTCTCAAGTGTGCAACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGGGGGTTAATGTATGCTaGGGACCACATTTAATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RDRGLRASKEHTHPTLLSGVNVC*GPHLIL Trigger: CAAAATTAAATGTGGTCCCAAGCATACATTAACCCC...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TCTTCCCCTCATGGTTCTCCTCTGACACCAAGTCCATaGAACCTAAACCCCACTTATGTCTCTTCCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSPHGSPLTPSP*NLNPTYVSSTQ Trigger: CTGAGTGGAAGAGACATAAGTGGGGTTTAGGTTTCATGGACTTGGTGTCAGAGGAGAACCATGAGGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | ATATCAGGGCCGTTCCCCTTGAGAACCCAGTACAACTaGTCTCTGGGAAGACTTAGGAAATGTAGACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISGPFPLRTQYN*SLGRLRKCRQK Trigger: CTTCTGTCTACATTTCCTAAGTCTTCCCAGAGAGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | GCTAACTTTGTGAACAGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCATAAAAGCTGAGCAGTaGTCTATCCTCTATGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ANFVNRQVASLTTFRRWGIKAEQ*SILYVV Trigger: AACAACATAGAGGATAGACAACTGCTCAGCTTTTAT...GCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCTGTTCACAAAGTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | CTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTaGTTCCAACAAAAGCAGAAAGCAGCATTAGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LATLACLLVKRP*FQQKQKAALDF Trigger: AAAATCTAATGCTGCTTTCTGCTTTTGTTGGAATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| 3UTR TCA 72 bp | CAGATTGTTGTGAACTGTCATGAGAATACTTGGAACTaGCACTGGGCCCTGGGAAGAGCAAGCAGTACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QIVVNCHENTWN*HWALGRASSTL Trigger: AAGAGTACTGCTTGCTCTTCCCAGGGCCCAGTGTCAGTTCCAAGTATTCTCATGACAGTTCACAACAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | ACTCTGGGGCCAGACTTCTTTCACATTTCAGAGCTATaGGTTTGGGTTAAATTGCTCAGCCTGTCCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLGPDFFHISEL*VWVKLLSLSLS Trigger: GCTAAGGGACAGGCTGAGCAATTTAACCCAAACTCATAGCTCTGAAATGTGAAAGAAGTCTGGCCCCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGCAACAGTCAAGTAGATTCTCCGGTATATGTCTTTGCTaGCACACACAGAAGATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AASQHRKQSKRQQSSRFSGICLC*HTQKIE Trigger: CTCTATCTTCTGTGTGTGCAAGCAAAGACATATACC...GGAGAATCTACTTGACTGTTGCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCAGTTCTCCAGTATCATGTTCCCCTaGGAGAGACAGAGGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCYLLEKPVSGCGMAQFSSIMFP*ERQRPQ Trigger: CTGAGGCCTCTGTCTCTCCAAGGGGAACATGATACT...GGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TCTGTAAGTGGAGTTACAGATTGTTGTGAACTGTCATaGGAATACTTGGAACTGACACTGGGCCCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVSGVTDCCELS*EYLELTLGPGK Trigger: CTTCCCAGGGCCCAGTGTCAGTTCCAAGTATTCTCATGACAGTTCACAACAATCTGTAACTCCACTTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | TTAAAAAGTTATGGATGTGTCTGTGTAGCAGGTGCATaGATTGCCTATGGAGTCCAGATGTGGGCATCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKSYGCVCVAGA*IAYGVQMWASK Trigger: CTTTGATGCCCACATCTGGACTCCATAGGCAATGCATGCACCTGCTACACAGACACATCCATAACTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | AGTTTTAAAAAGTTATGGATGTGTCTGTGTAGCAGGTaGATGCATTGCCTATGGAGTCCAGATGTGGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SFKKLWMCLCSR*MHCLWSPDVGI Trigger: GATGCCCACATCTGGACTCCATAGGCAATGCATGCACCTGCTACACAGACACATCCATAACTTTTTAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | ATGGCTCTCAGTCAGGCGTTGTATATTAACTTCAGGTaGGGAAAAGTGATGAAAAACTCCTTTCCCGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: MALSQALYINFR*GKVMKNSFPDP Trigger: AGGATCGGGAAAGGAGTTTTTCATCACTTTTCCCCACCTGAAGTTAATATACAACGCCTGACTGAGAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | CTAAGGACCACACTTTTTGTACTCTTCTTCCCCTCATaGTTCTCCTCTGACACCAAGTCCATGAAACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRTTLFVLFFPS*FSSDTKSMKPK Trigger: TTTAGGTTTCATGGACTTGGTGTCAGAGGAGAACCATGAGGGGAAGAAGAGTACAAAAAGTGTGGTCCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | TTTCTCCAGACGCAGCAACATCCTAAACAGGTATTCTaGAATCCCACACCCCTAGTCATATTTTCAGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLQTQQHPKQVF*NPTPLVIFSVR Trigger: CCTAACTGAAAATATGACTAGGGGTGTGGGATTCCAGAATACCTGTTTAGGATGTTGCTGCGTCTGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | GGAACAGAGAGAGCTCCTAGCTCCACTATTAAACACTaGCACTGCTACCATGTAATTAGTGAGCATCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GTERAPSSTIKH*HCYHVISEHLS Trigger: TGATAGATGCTCACTAATTACATGGTAGCAGTGTCAGTGTTTAATAGTGGAGCTAGGAGCTCTCTCTGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TTAATGACAAATTTATCATATCAGGGCCGTTCCCCTTaGGAACCCAGTACAACTGCTCTCTGGGAAGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: LMTNLSYQGRSP*EPSTTALWEDL Trigger: TAAGTCTTCCCAGAGAGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTGATATGATAAATTTGTCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | TTATGTGAGGAGCATTGCATCTGGTTGTGGATTTGTTaGGAAATACTAGAGTGGGTGGAAACGTTGTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LCEEHCIWLWIC*EILEWVETLST Trigger: AGTAGACAACGTTTCCACCCACTCTAGTATTTCTCAACAAATCCACAACCAGATGCAATGCTCCTCACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | ACCCCAGATATAATAAGTCTGAAGAAAAACCAGCATTaGTTGCTTGCCTGCCTTCACTTCTTGTTGGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TPDIISLKKNQH*LLACLHFLLVN Trigger: ATTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTTTTTCTTCAGACTTATTATATCTGGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | AAAGTGATGAAAAACTCCTTTCCCGATCCTGGGTCATaGAACAAAAATCTGACTGTGAGTCTGTCTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KVMKNSFPDPGS*NKNLTVSLSML Trigger: TAGCATAGACAGACTCACAGTCAGATTTTTGTTCCATGACCCAGGATCGGGAAAGGAGTTTTTCATCACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | ACAAAAGACATCTATGAGGGTGTGGCATCTTCACAATaGGGATTTGAGATTTCTAGACAGCAAAGTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TKDIYEGVASSQ*GFEISRQQSLD Trigger: GTCAAGACTTTGCTGTCTAGAAATCTCAAATCCCCATTGTGAAGATGCCACACCCTCATAGATGTCTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCATAACTTCACATAGTCTCCTTCTGAAGGCTCTAGATGCTCTTTTAGGTTGCCTTCACTTCTTGTaGGTCAATGTGCTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EIITSHSLLLKALDALLGCLHFL*VNVLSV Trigger: AACAGAAAGCACATTGACCAACAAGAAGTGAAGGCA...ACCTAAAAGAGCATCTAGAGCCTTCAGAAGGAGACTATGTGAAGTTATGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | GCCACAAATGCACACTGTTGCAGGATATTTGAACTGTaGACCCCAAGATTGTGCTATTTATTGGAAAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ATNAHCCRIFEL*TPRLCYLLEKP Trigger: AGGTTTTTCCAATAAATAGCACAATCTTGGGGTTCACAGTTCAAATATCCTGCAACAGTGTGCATTTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | CATTCTTGCCACAAATGCACACTGTTGCAGGATATTTaGACTGTGAACCCCAAGATTGTGCTATTTATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSCHKCTLLQDI*TVNPKIVLFIG Trigger: TCCAATAAATAGCACAATCTTGGGGTTCACAGTTCAAATATCCTGCAACAGTGTGCATTTGTGGCAAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | TTTAGAAACAATTGTTTCTTATGTATGTGTGTAGTCTaGTTTCCTCTACAGGTGCCATCTCTGGCGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FRNNCFLCMCVV*FPLQVPSLAFP Trigger: TGGAAACGCCAGAGATGGCACCTGTAGAGGAAAGCAGACTACACACATACATAAGAAACAATTGTTTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | ATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTaGTATGGCTCAGTTCTCCAAGAGCTTTCTGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IVLFIGKTCFWL*YGSVLQELSAY Trigger: GTAAGCAGAAAGCTCTTGGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | ATAGGCTGTCTGCTTAGACATGCTGTGTTAAACCACTaGAATAGACTTGAGAAATTGGCAGGTGTAAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IGCLLRHAVLNH*NRLEKLAGVSL Trigger: TAAACTTACACCTGCCAATTTCTCAAGTCTATTTCAGTGGTTTAACACAGCATGTCTAAGCAGACAGCCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR GCA 72 bp | GGGTTACATTTCTCAAAATCTATCCCCAGCAAGTGGTaGATGGCTGCAAATAAAGATGCTTGTAGATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: GLHFSKSIPSKW*MAANKDACRLI Trigger: AATTAATCTACAAGCATCTTTATTTGCAGCCATGCACCACTTGCTGGGGATAGATTTTGAGAAATGTAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | GTTAATGTATGCTTGGGACCACATTTAATTTTGAAGTaGATAGTAGGTGTGCAGCAGATGCTTTTAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: VNVCLGPHLILK*IVGVQQMLLAT Trigger: AGTAGCTAAAAGCATCTGCTGCACACCTACTATCCACTTCAAAATTAAATGTGGTCCCAAGCATACATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTCACTCATACTTTCTCCTCTTATGCAGGAATCTGTGTATCTCTGTACAGAATGGACCACATTTAATTTaGAAGTGGATAGTAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IHSYFLLLCRNLCISVQNGPHLI*KWIVGV Trigger: CACACCTACTATCCACTTCAAAATTAAATGTGGTCC...ATTCTGTACAGAGATACACAGATTCCTGCATAAGAGGAGAAAGTATGAGTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CCA 72 bp | AAAAACCTTACTGTGAATAGGGTGAGAATCACAATTTaGTCTTTATCTGGGTTTACCATGAAAGCAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KNLTVNRVRITI*SLSGFTMKAVS Trigger: GCTAACTGCTTTCATGGTAAACCCAGATAAAGACCAAATTGTGATTCTCACCCTATTCACAGTAAGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR TCA 72 bp | AGATTTCTAGACAGCAAAGTCTTGACTGGTAGTTTATaGACAGCATATGTTTATTTCATCTACTGGCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RFLDSKVLTGSL*TAYVYFIYWPN Trigger: GTTTGGCCAGTAGATGAAATAAACATATGCTGTTCATAAACTACCAGTCAAGACTTTGCTGTCTAGAAATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR TCA 90 bp | GCTAACTTTGTGAACAGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCACTCGTTTCCGCATGTaGCCCTGCCATTCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANFVNRQVASLTTFRRWGTRFRM*PCHSRC Trigger: GCAGCGGGAATGGCAGGGTCACATGCGGAAACGAGT...GCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCTGTTCACAAAGTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGTCGTCAAACACGTCCTaGTCTCCAGGGCTCGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDRGLRASKEHTHPTLLSSSNTS*SPGLAF Trigger: GAACGCGAGCCCTGGAGACCAGGACGTGTTTGACGA...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | CCTGCCTTCACTTCTTGTTGGTCAATGTGCTTTCTGTaGCTGCCGTTACCACTCACACCCTGGCCTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAFTSCWSMCFL*LPLPLTPWPSI Trigger: GATGCTAGGCCAGGGTGTGAGTGGTAACGGCAGCAACAGAAAGCACATTGACCAACAAGAAGTGAAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | GCCTTTTGTGTGTGGTGTATGGGTATATGTCTTTGCTaGCACACACAGAAGATAGAGGGCATCAGAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFCVWCMGICLC*HTQKIEGIRGP Trigger: GGGACCTCTGATGCCCTCTATCTTCTGTGTGTGCAAGCAAAGACATATACCCATACACCACACACAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | AACCAGCATTGCTTGCTTGCCTGCCTTCACTTCTTGTaGGTCAATGTGCTTTCTGTTGCTGCCGTTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NQHCLLACLHFL*VNVLSVAAVTT Trigger: AGTGGTAACGGCAGCAACAGAAAGCACATTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCAATCCAAGAGAGGCTTaGTTTTTCCAAATGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAFRLLLATLACLLVKRPNPREA*FFQMCM Trigger: CATGCACATTTGGAAAAACCAAGCCTCTCTTGGATT...GGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAAGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| 3UTR CAA 72 bp | TATGCTAGCTTTCAGGTTACTTCTGGCAACTCTGGCTaGCTTGCTGGTGAAGAGGCCCTGATTCCAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YASFQVTSGNSG*LAGEEALIPTK Trigger: TTTTGTTGGAATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAAGCTAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| 3UTR CAA 72 bp | CGCCACCCAGTGGCTGTGAACTCACTCAACAGCCTTTaGAAAACAATCCAAAGGCCTTACTCTTTGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHPVAVNSLNSL*KTIQRPYSLIV Trigger: CACTATCAAAGAGTAAGGCCTTTGGATTGTTTTCAAAAGGCTGTTGAGTGAGTTCACAGCCACTGGGTGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR TCA 90 bp | AAATTGAACGTAAATGCTTTTAACCATGGAGCTACAGCTTCAGCCCCTAACAGCCCGATTTCAGACGTCTaGGCACACACTCTTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KLNVNAFNHGATASAPNSPISDV*AHTLHT Trigger: AGTGTGAAGAGTGTGTGCTCAGACGTCTGAAATCGG...GCTGTTAGGGGCTGAAGCTGTAGCTCCATGGTTAAAAGCATTTACGTTCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | AACAGCCTTTTGTGTGTGGTGTATGGGTATATGTCTTaGCTTGCACACACAGAAGATAGAGGGCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLCVVYGYMS*LAHTEDRGHQR Trigger: CCTCTGATGCCCTCTATCTTCTGTGTGTGCAAGCAAAGACATATACCCATACACCACACACAAAAGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTTGTGGTATGGCTCTCTGACGGAACTACGTaGCAAAGGTCCATATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQDCAIYWKNLFLVVVWLSDGTT*QRSISS Trigger: TGAGGATATGGACCTTTGTCACGTAGTTCCGTCAGA...GAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR GCA 90 bp | GACCTGGCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGCAACAGTCAAGTAGATGGTTTTTCCAAATGTaGATGCTCTTTTGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: DLAASQHRKQSKRQQSSRWFFQM*MLFWST Trigger: TGTAGACCAAAAGAGCATGCACATTTGGAAAAACCA...TCTACTTGACTGTTGCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTGATTTGGTTTTTCCAAATGTaGATGCTCTTTTGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: FQVTSGNSGLLAGEEALIWFFQM*MLFWST Trigger: TGTAGACCAAAAGAGCATGCACATTTGGAAAAACCA...AATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| CDS-3UTR GCA 90 bp | GACCTGGCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGCAACAGTCAAGTAGATTTTCCAAATGTGCATaGTCTTTTGGTCTACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DLAASQHRKQSKRQQSSRFSKCA*SFGLQC Trigger: ACATTGTAGACCAAAAGAGCATGCACATTTGGAAAA...TCTACTTGACTGTTGCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTGATTTTTTCCAAATGTGCATaGTCTTTTGGTCTACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FQVTSGNSGLLAGEEALIFSKCA*SFGLQC Trigger: ACATTGTAGACCAAAAGAGCATGCACATTTGGAAAA...AATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
||
| 3UTR CAA 72 bp | ACATCTATGAGGGTGTGGCATCTTCACAATGGGGATTaGAGATTTCTAGACAGCAAAGTCTTGACTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSMRVWHLHNGD*RFLDSKVLTGS Trigger: ACTACCAGTCAAGACTTTGCTGTCTAGAAATCTCAAATCCCCATTGTGAAGATGCCACACCCTCATAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | GTTAAATTGCTCAGCCTGTCCCTTAGCTTAGTTTCCTaGTCTCTAGCATTGGCTAATGTATCTCTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKLLSLSLSLVS*SLALANVSLSD Trigger: GTCAGAGAGAGATACATTAGCCAATGCTAGAGACAAGGAAACTAAGCTAAGGGACAGGCTGAGCAATTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | TTTAATGACAAATTTATCATATCAGGGCCGTTCCCCTaGAGAACCCAGTACAACTGCTCTCTGGGAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: FNDKFIISGPFP*RTQYNCSLGRL Trigger: AAGTCTTCCCAGAGAGCAGTTGTACTGGGTTCTCAAGGGGAACGGCCCTGATATGATAAATTTGTCATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | CACCCCAGATATAATAAGTCTGAAGAAAAACCAGCATaGCTTGCTTGCCTGCCTTCACTTCTTGTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HPRYNKSEEKPA*LACLPSLLVGQ Trigger: TTGACCAACAAGAAGTGAAGGCAGGCAAGCAAGCAATGCTGGTTTTTCTTCAGACTTATTATATCTGGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | AGCCTGTCCCTTAGCTTAGTTTCCTTGTCTCTAGCATaGGCTAATGTATCTCTCTCTGACAGAGTTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLVSLSLA*ANVSLSDRVLR Trigger: TCTTAAAACTCTGTCAGAGAGAGATACATTAGCCAATGCTAGAGACAAGGAAACTAAGCTAAGGGACAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | TACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTaGCAGACCCCTTCTCTAGTCATTCTTGCCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YWLVHIVVPPIG*QTPSLVILATN Trigger: ATTTGTGGCAAGAATGACTAGAGAAGGGGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | AAGATTGTGCTATTTATTGGAAAAACCTGTTTCTGGTaGTGGTATGGCTCAGTTCTCCAAGAGCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIVLFIGKTCFW*WYGSVLQELSA Trigger: AGCAGAAAGCTCTTGGAGAACTGAGCCATACCACAACCAGAAACAGGTTTTTCCAATAAATAGCACAATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| 3UTR CAA 72 bp | TCATTCTTGCCACAAATGCACACTGTTGCAGGATATTaGAACTGTGAACCCCAAGATTGTGCTATTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQMHTVAGY*NCEPQDCAIYW Trigger: CCAATAAATAGCACAATCTTGGGGTTCACAGTTCAAATATCCTGCAACAGTGTGCATTTGTGGCAAGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR GCA 90 bp | AATAAAAACCTTACTGTGAATAGGGTGAGAATCACAATTTGGTCTTTATCTGGGACTAAACTGGATGTCTaGTCCAGAATCCAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKNLTVNRVRITIWSLSGTKLDV*SRIQER Trigger: CCTCTCTTGGATTCTGGAGCAGACATCCAGTTTAGT...CCCAGATAAAGACCAAATTGTGATTCTCACCCTATTCACAGTAAGGTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR CCA 90 bp | AATAAAAACCTTACTGTGAATAGGGTGAGAATCACAATTTGGTCTTTATCTGGGAATCCAAGAGAGGCTTaGTTTTTCCAAATGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NKNLTVNRVRITIWSLSGNPREA*FFQMCM Trigger: CATGCACATTTGGAAAAACCAAGCCTCTCTTGGATT...CCCAGATAAAGACCAAATTGTGATTCTCACCCTATTCACAGTAAGGTTTTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS CCA 90 bp | CGCTGCGCTAACAGAGACTCGTCCGCTTCCTCGTCAAACACGTCCTaGTCTCCAGGGCTCGCGTTCTCCGGAGCCGCTCGAAACCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCANRDSSASSSNTS*SPGLAFSGAARNQD Trigger: GTCTTGGTTTCGAGCGGCTCCGGAGAACGCGAGCCCTGGAGACCAGGACGTGTTTGACGAGGAAGCGGACGAGTCTCTGTTAGCGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGTGGCCAGTCTGACAACATTTCGGCGATGGGGCAGCTGTGACCTTGCCATCTCTGTAACCCTCTaGGACTCGTTTCCGCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQVASLTTFRRWGSCDLAISVTL*DSFPHV Trigger: CACATGCGGAAACGAGTCCAAGAGGGTTACAGAGAT...GGCAAGGTCACAGCTGCCCCATCGCCGAAATGTTGTCAGACTGGCCACTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
||
| CDS-3UTR CAA 90 bp | AGAGACAGAGGCCTCAGAGCCTCTAAAGAACACACACACCCTACCCTGCTGTCGTTGATTGAAGCCCCGTaGAAGAGTAAGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDRGLRASKEHTHPTLLSLIEAP*KSKCFA Trigger: GGCAAAGCACTTACTCTTCAACGGGGCTTCAATCAA...CGACAGCAGGGTAGGGTGTGTGTGTTCTTTAGAGGCTCTGAGGCCTCTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS TCA 90 bp | AGAATCGGTGTTAATCTCAGCGTTACTGTCACCTTTCGCTTGGTCTaGCGGAACTACGTGACAAAGGTCCATATCCTCAATGGCGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RIGVNLSVTVTFRLV*RNYVTKVHILNGVQ Trigger: TTGGACGCCATTGAGGATATGGACCTTTGTCACGTAGTTCCGTCAGACCAAGCGAAAGGTGACAGTAACGCTGAGATTAACACCGATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS-3UTR CAA 90 bp | CTAGCTTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCAATGTGCATGCTCTTTaGGTCTACAATGTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LAFRLLLATLACLLVKRPNVHAL*VYNVLD Trigger: ATCCAGAACATTGTAGACCAAAAGAGCATGCACATT...GGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAAGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS TCA 90 bp | ATCTCAGCGTTACTGTCACCTTTCGCTTGGTCTGACGGAACTACGTaGCAAAGGTCCATATCCTCAATGGCGTCCAATAAATCCGTAACT | + |
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Preference number: 5 (lower is better) Translates to: ISALLSPFAWSDGTT*QRSISSMASNKSVT Trigger: AGTTACGGATTTATTGGACGCCATTGAGGATATGGACCTTTGTCACGTAGTTCCGTCAGACCAAGCGAAAGGTGACAGTAACGCTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS GCA 90 bp | AATATGTCTGCCGGTACTCCCAGCTGTTTCACTAAACTGGATGTCTaGTCCAGAATCCAAGAGAGGCTTGGTTTTTCCAAATGTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: NMSAGTPSCFTKLDV*SRIQERLGFSKCAC Trigger: GCATGCACATTTGGAAAAACCAAGCCTCTCTTGGATTCTGGAGCAGACATCCAGTTTAGTGAAACAGCTGGGAGTACCGGCAGACATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS CCA 90 bp | GGTGCTGTAATATGTCTGCCGGTACTCCCAGCTGTTTCACTAAACTaGATGTCTGCTCCAGAATCCAAGAGAGGCTTGGTTTTTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GAVICLPVLPAVSLN*MSAPESKRGLVFPN Trigger: ATTTGGAAAAACCAAGCCTCTCTTGGATTCTGGAGCAGACATCCAGTTTAGTGAAACAGCTGGGAGTACCGGCAGACATATTACAGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS-3UTR CAA 90 bp | GACCTGGCTGCCTCCCAGCATAGAAAGCAAAGCAAAAGGCAACAGTCAAGTAGAGAATCCAAGAGAGGCTaGGTTTTTCCAAATGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: DLAASQHRKQSKRQQSSRESKRG*VFPNVH Trigger: ATGCACATTTGGAAAAACCAAGCCTCTCTTGGATTC...TCTACTTGACTGTTGCCTTTTGCTTTGCTTTCTATGCTGGGAGGCAGCCAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS-3UTR CAA 90 bp | TTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTGATTGAATCCAAGAGAGGCTaGGTTTTTCCAAATGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: FQVTSGNSGLLAGEEALIESKRG*VFPNVH Trigger: ATGCACATTTGGAAAAACCAAGCCTCTCTTGGATTC...AATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS GCA 90 bp | AGCACTCAGTGTTCCTCTAAGGAGTCCATAGTTTATAATGACGTCTaGACCCTCTTTGTACCCTTGATTGAAGCCCCGTTGAAGAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: STQCSSKESIVYNDV*TLFVPLIEAPLKSK Trigger: CTTACTCTTCAACGGGGCTTCAATCAAGGGTACAAAGAGGGTGCAGACGTCATTATAAACTATGGACTCCTTAGAGGAACACTGAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS GCA 90 bp | GTCTGCTCCAGAATCCAAGAGAGGCTTGGTTTTTCCAAATGTGCATaGTCTTTTGGTCTACAATGTTCTGGATGTGAACAACCCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: VCSRIQERLGFSKCA*SFGLQCSGCEQPIP Trigger: TGGGATGGGTTGTTCACATCCAGAACATTGTAGACCAAAAGAGCATGCACATTTGGAAAAACCAAGCCTCTCTTGGATTCTGGAGCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS CCA 90 bp | TGTGATGTAACCGATTTCAGACGTCTGAGCACACACTCTTCACACTaGTCAACTGTGTCCAGGAGGTTACTTATCTTACTGATCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: CDVTDFRRLSTHSSH*STVSRRLLILLIRV Trigger: GACTCTGATCAGTAAGATAAGTAACCTCCTGGACACAGTTGACCAGTGTGAAGAGTGTGTGCTCAGACGTCTGAAATCGGTTACATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS-3UTR CAA 90 bp | AAATTGAACGTAAATGCTTTTAACCATGGAGCTACAGCTTCAGCCCCTAACAGCACCCTCTTTGTACCCTaGATTGAAGCCCCGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KLNVNAFNHGATASAPNSTLFVP*IEAPLK Trigger: CTTCAACGGGGCTTCAATCAAGGGTACAAAGAGGGT...GCTGTTAGGGGCTGAAGCTGTAGCTCCATGGTTAAAAGCATTTACGTTCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS-3UTR CAA 90 bp | TTTCAGGTTACTTCTGGCAACTCTGGCTTGCTTGCTGGTGAAGAGGCCCTGATTAATGTGCATGCTCTTTaGGTCTACAATGTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: FQVTSGNSGLLAGEEALINVHAL*VYNVLD Trigger: ATCCAGAACATTGTAGACCAAAAGAGCATGCACATT...AATCAGGGCCTCTTCACCAGCAAGCAAGCCAGAGTTGCCAGAAGTAACCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS TCA 90 bp | ACTCTTCACACTGGTCAACTGTGTCCAGGAGGTTACTTATCTTACTaGTCAGAGTCGAACTATTACCATGAAGGTGACACCAGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TLHTGQLCPGGYLSY*SESNYYHEGDTRKA Trigger: TGCTTTCCTGGTGTCACCTTCATGGTAATAGTTCGACTCTGATCAGTAAGATAAGTAACCTCCTGGACACAGTTGACCAGTGTGAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS CCA 72 bp | AACAGAGACTCGTCCGCTTCCTCGTCAAACACGTCCTaGTCTCCAGGGCTCGCGTTCTCCGGAGCCGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: NRDSSASSSNTS*SPGLAFSGAAR Trigger: TCGAGCGGCTCCGGAGAACGCGAGCCCTGGAGACCAGGACGTGTTTGACGAGGAAGCGGACGAGTCTCTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS GCA 72 bp | GCCGGTACTCCCAGCTGTTTCACTAAACTGGATGTCTaGTCCAGAATCCAAGAGAGGCTTGGTTTTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AGTPSCFTKLDV*SRIQERLGFSK Trigger: TTTGGAAAAACCAAGCCTCTCTTGGATTCTGGAGCAGACATCCAGTTTAGTGAAACAGCTGGGAGTACCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS CCA 72 bp | ATATGTCTGCCGGTACTCCCAGCTGTTTCACTAAACTaGATGTCTGCTCCAGAATCCAAGAGAGGCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: ICLPVLPAVSLN*MSAPESKRGLV Trigger: AACCAAGCCTCTCTTGGATTCTGGAGCAGACATCCAGTTTAGTGAAACAGCTGGGAGTACCGGCAGACATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS TCA 72 bp | TTACTGTCACCTTTCGCTTGGTCTGACGGAACTACGTaGCAAAGGTCCATATCCTCAATGGCGTCCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: LLSPFAWSDGTT*QRSISSMASNK Trigger: TTTATTGGACGCCATTGAGGATATGGACCTTTGTCACGTAGTTCCGTCAGACCAAGCGAAAGGTGACAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS TCA 72 bp | GTTAATCTCAGCGTTACTGTCACCTTTCGCTTGGTCTaGCGGAACTACGTGACAAAGGTCCATATCCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: VNLSVTVTFRLV*RNYVTKVHILN Trigger: ATTGAGGATATGGACCTTTGTCACGTAGTTCCGTCAGACCAAGCGAAAGGTGACAGTAACGCTGAGATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS TCA 72 bp | ACTGGTCAACTGTGTCCAGGAGGTTACTTATCTTACTaGTCAGAGTCGAACTATTACCATGAAGGTGACACC | + |
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Preference number: 6 (lower is better) Translates to: TGQLCPGGYLSY*SESNYYHEGDT Trigger: GGTGTCACCTTCATGGTAATAGTTCGACTCTGATCAGTAAGATAAGTAACCTCCTGGACACAGTTGACCAGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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| CDS TCA 72 bp | ATGTGCATGCTCTTTTGGTCTACAATGTTCTGGATGTaGACAACCCATCCCATTTGGACTGTCAGAATCGGT | + |
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Preference number: 6 (lower is better) Translates to: MCMLFWSTMFWM*TTHPIWTVRIG Trigger: ACCGATTCTGACAGTCCAAATGGGATGGGTTGTTCACATCCAGAACATTGTAGACCAAAAGAGCATGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099735.6 ENSMUST00000222796.2 |
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| CDS CAA 72 bp | ATAGTTTATAATGACGTCTGCACCCTCTTTGTACCCTaGATTGAAGCCCCGTTGAAGAGTAAGTGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: IVYNDVCTLFVP*IEAPLKSKCFA Trigger: GGCAAAGCACTTACTCTTCAACGGGGCTTCAATCAAGGGTACAAAGAGGGTGCAGACGTCATTATAAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099735.6 |
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