RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XYLT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030657

Ensembl transcript IDs: ENSMUST00000032892.7

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCACTTGTAGGGGTGCAGGCCATCGGAGGGGGAGAACAGGAGCCTaGAGGACTGAGCGACAACTGGTAGAGGGAGACCACTGTAGCTCC +
Preference number: 1 (lower is better)
Translates to: LTCRGAGHRRGRTGA*RTERQLVEGDHCSS
Trigger: GGAGCTACAGTGGTCTCCCTCTACCAGTTGTCGCTCAGTCCTGCAGGCTCCTGTTCTCCCCCTCCGATGGCCTGCACCCCTACAAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp CACTGGGTCCCGAGGGAAGGGGAGACTGAAGCTGTAGTGAACATCTaGTGGTGGTGCCAGCCAGTGCCACGGCAACACGGAGAGTGCTCA +
Preference number: 1 (lower is better)
Translates to: HWVPREGETEAVVNI*WWCQPVPRQHGECS
Trigger: TGAGCACTCTCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTTCACTACAGCTTCAGTCTCCCCTTCCCTCGGGACCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp GTCCCGAGGGAAGGGGAGACTGAAGCTGTAGTGAACATCTGCTGGTaGTGCCAGCCAGTGCCACGGCAACACGGAGAGTGCTCAGAACTG +
Preference number: 1 (lower is better)
Translates to: VPREGETEAVVNICW*CQPVPRQHGECSEL
Trigger: CAGTTCTGAGCACTCTCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTTCACTACAGCTTCAGTCTCCCCTTCCCTCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp AACATCTGCTGGTGGTGCCAGCCAGTGCCACGGCAACACGGAGAGTaGTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCCCATAGG +
Preference number: 1 (lower is better)
Translates to: NICWWCQPVPRQHGE*SELREQPRLHFAHR
Trigger: CCTATGGGCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 90 bp TGTGCAGCTGTCCAGGTCAGAAGCCTGGGTCCACATAATCCCCTTTaGGATTCAGAGCCCCGGTTCGGCACCGCTCCCACTTTCAAGTAC +
Preference number: 1 (lower is better)
Translates to: CAAVQVRSLGPHNPL*DSEPRFGTAPTFKY
Trigger: GTACTTGAAAGTGGGAGCGGTGCCGAACCGGGGCTCTGAATCTCAAAGGGGATTATGTGGACCCAGGCTTCTGACCTGGACAGCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp TTTGAGAAGGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTaGACTTCATCTTGGTCTTGCACTTCCACCCCGACCGTGCCGAGT +
Preference number: 1 (lower is better)
Translates to: FEKEPHTTSASTRAA*TSSWSCTSTPTVPS
Trigger: ACTCGGCACGGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCCTTCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp GAGTTGCTCCCTTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTaGGAAGTTGGCTTTGGGAGCCATAGTTACCAAATGGCATGGAGA +
Preference number: 1 (lower is better)
Translates to: ELLPSLSETYTACTA*EVGFGSHSYQMAWR
Trigger: TCTCCATGCCATTTGGTAACTATGGCTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAAGGGAGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp ACTCTCATTTGGGAGACTCCAGGAGGAAGGGGTGCTCTTCCTCAGTaGCCCTTGAATACACATGGCAAGAAGACCCTTGGGTTTCTGGTA +
Preference number: 1 (lower is better)
Translates to: TLIWETPGGRGALPQ*PLNTHGKKTLGFLV
Trigger: TACCAGAAACCCAAGGGTCTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAAGAGCACCCCTTCCTCCTGGAGTCTCCCAAATGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp CTGTTACCATTTGTGACAGCCTTGGAAGAGGCTGATCAGGACAGATaGCAAGTTGGCAGTCACATGTCTGGGGACCTTGGCTGCTTCACA +
Preference number: 1 (lower is better)
Translates to: LLPFVTALEEADQDR*QVGSHMSGDLGCFT
Trigger: TGTGAAGCAGCCAAGGTCCCCAGACATGTGACTGCCAACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCTGTCACAAATGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 90 bp CTTTACCCTGTTCCTGTTACCATTTGTGACAGCCTTGGAAGAGGCTaGTCAGGACAGATGGCAAGTTGGCAGTCACATGTCTGGGGACCT +
Preference number: 1 (lower is better)
Translates to: LYPVPVTICDSLGRG*SGQMASWQSHVWGP
Trigger: AGGTCCCCAGACATGTGACTGCCAACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCTGTCACAAATGGTAACAGGAACAGGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp AACAGAAAAAGAACTTCATTGTTAAAGCCAAGGGGCACTGGGAGTTaGTCCCTTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: NRKRTSLLKPRGTGS*SLPSQRLTQPAQPG
Trigger: CCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAAGGGAGCAACTCCCAGTGCCCCTTGGCTTTAACAATGAAGTTCTTTTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp CTGAAATGTTTGTTCCTGCGTGGGAGAAGTCTGATCCATGCAGTTTaGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: LKCLFLRGRSLIHAV*SQPTAPRAQFTKVW
Trigger: CCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp GGCAAGAACAGAACCAAAGACAACAGGAGGGACATACACAGGTGGTaGGTGACAACCCTCCTCGGTCTTAAGAGGTCCTTGTTCATAAGG +
Preference number: 1 (lower is better)
Translates to: GKNRTKDNRRDIHRW*VTTLLGLKRSLFIR
Trigger: CCTTATGAACAAGGACCTCTTAAGACCGAGGAGGGTTGTCACCCACCACCTGTGTATGTCCCTCCTGTTGTCTTTGGTTCTGTTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 90 bp AACCCCTTAGGGGTGTTTGCACATGTGCTTGTGCGTGTGTGTGTATaGGTGCCTGTGTGTGTGTTTGTGTGGCTGTGTTCATACCCTCTA +
Preference number: 1 (lower is better)
Translates to: NPLGVFAHVLVRVCV*VPVCVFVWLCSYPL
Trigger: TAGAGGGTATGAACACAGCCACACAAACACACACACAGGCACTCATACACACACACGCACAAGCACATGTGCAAACACCCCTAAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp GGACCACCCCTTCAAGAACGTGACCTATCCACTGGGAATACTCCATaGTGTCACTTTCCAGGCAAGAAAGATGAAGCGATACACGGAGAA +
Preference number: 1 (lower is better)
Translates to: GPPLQERDLSTGNTP*CHFPGKKDEAIHGE
Trigger: TTCTCCGTGTATCGCTTCATCTTTCTTGCCTGGAAAGTGACAGCATGGAGTATTCCCAGTGGATAGGTCACGTTCTTGAAGGGGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp AAGATGACATTTAAGTCATTCCTAGTGCATCTGCAGACTACAGATTaGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCCAGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: KMTFKSFLVHLQTTD*QSLCSGGRHTPRLQ
Trigger: TTGAAGCCTGGGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGCACTAGGAATGACTTAAATGTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp ACCCAATCTGAAATGTTTGTTCCTGCGTGGGAGAAGTCTGATCCATaGAGTTTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAA +
Preference number: 1 (lower is better)
Translates to: TQSEMFVPAWEKSDP*SLVTANSTKGTVHK
Trigger: TTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTCAGATTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp TCCAGGAGGAAGGGGTGCTCTTCCTCAGTGCCCCTTGAATACACATaGCAAGAAGACCCTTGGGTTTCTGGTAACTCAAGCAATATGAAT +
Preference number: 1 (lower is better)
Translates to: SRRKGCSSSVPLEYT*QEDPWVSGNSSNMN
Trigger: ATTCATATTGCTTGAGTTACCAGAAACCCAAGGGTCTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAAGAGCACCCCTTCCTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp TTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTaGCTTTATTACCAGAGGATTCATGTGCGTGCCAGTAAGACCACA +
Preference number: 1 (lower is better)
Translates to: FAFLLAVISWELSHS*LYYQRIHVRASKTT
Trigger: TGTGGTCTTACTGGCACGCACATGAATCCTCTGGTAATAAAGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp ACTTTAAGGTTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTaGGCAGCCACCTCCCAAGGCTGTTGTTTCACCAATAGCCTCCAA +
Preference number: 1 (lower is better)
Translates to: TLRFPEMMVLCFQNS*AATSQGCCFTNSLQ
Trigger: TTGGAGGCTATTGGTGAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAACCTTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp AATAATAAATATCAAGGGTCCCTTCTCTATGCCCGCCATGTTAGATaGGGAAAGGGCTGTGCAGTCGACACATCAAGGTGGACTTCAGTA +
Preference number: 1 (lower is better)
Translates to: NNKYQGSLLYARHVR*GKGCAVDTSRWTSV
Trigger: TACTGAAGTCCACCTTGATGTGTCGACTGCACAGCCCTTTCCCCATCTAACATGGCGGGCATAGAGAAGGGACCCTTGATATTTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp GAGTCCACTGCAATGAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTaGGAGCTGAGCCACAGCTGCCTTTATTACCAGAGGATTCATGTG +
Preference number: 1 (lower is better)
Translates to: ESTAMSFAFLLAVIS*ELSHSCLYYQRIHV
Trigger: CACATGAATCCTCTGGTAATAAAGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTCATTGCAGTGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp AAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGTTCCTGCGTaGGAGAAGTCTGATCCATGCAGTTTGGTCACAGCCAACAGCACC +
Preference number: 1 (lower is better)
Translates to: KDMKLRTQSEMFVPA*EKSDPCSLVTANST
Trigger: GGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTCAGATTGGGTCCTTAATTTCATATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp ATTGTAACACTTTTGAATATAGAGGGACAGGTGAGACCAGCATCCTaGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAATGGGTCTACTT +
Preference number: 1 (lower is better)
Translates to: IVTLLNIEGQVRPAS*VSKEEVPAIQMGLL
Trigger: AAGTAGACCCATTTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCCCTCTATATTCAAAAGTGTTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 90 bp CTCTCAGGAACTGCTGATCCGAACCCTCATGAACTCGGTGGTAAATaGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGATTGCTCT +
Preference number: 1 (lower is better)
Translates to: LSGTADPNPHELGGK*FLLHTLHFVAIDCS
Trigger: AGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATGAGGGTTCGGATCAGCAGTTCCTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 90 bp TGGGTCAAAAACCAGAGGAAACAAATATCCTCAAATTACTTGTGGTaGATAAAGAGGGAGAGGAGTGTCTTCAGAGGAAGTAGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: WVKNQRKQISSNYLW*IKRERSVFRGSRLC
Trigger: GCAGAGCCTACTTCCTCTGAAGACACTCCTCTCCCTCTTTATTCACCACAAGTAATTTGAGGATATTTGTTTCCTCTGGTTTTTGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp AACATCCTCTTATCTATCGGAAAACTAGACAACCAGAAGGGGTTATaGTCTGTAAATACCCAGACTACATCCAAAGTAGCAACAAACCCC +
Preference number: 1 (lower is better)
Translates to: NILLSIGKLDNQKGL*SVNTQTTSKVATNP
Trigger: GGGGTTTGTTGCTACTTTGGATGTAGTCTGGGTATTTACAGAGCATAACCCCTTCTGGTTGTCTAGTTTTCCGATAGATAAGAGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 90 bp GGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGATTaGTCTTCTCTGTTATGGAGTGTCTTGGGAGAGAGGTTACAGTTT +
Preference number: 1 (lower is better)
Translates to: GKWFLLHTLHFVAID*SSLLWSVLGERLQF
Trigger: AAACTGTAACCTCTCTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 90 bp CCTTGGGTTTCTGGTAACTCAAGCAATATGAATAACACTATTTTCTaGACTACCTTCCCACTGTTGAAACTTAACTTTATTCTCCTGTGG +
Preference number: 1 (lower is better)
Translates to: PWVSGNSSNMNNTIF*TTFPLLKLNFILLW
Trigger: CCACAGGAGAATAAAGTTAAGTTTCAACAGTGGGAAGGTAGTTCAGAAAATAGTGTTATTCATATTGCTTGAGTTACCAGAAACCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTAGGAGCCTGCAGGACTaGGCGACAACTGGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCRSLQD*ATTGRG
Trigger: CCCTCTACCAGTTGTCGCTCAGTCCTGCAGGCTCCT...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTGGGAGAACAGGAGCCTaGAGGACTGAGCGACAACTG +
Preference number: 2 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCGRTGA*RTERQL
Trigger: CAGTTGTCGCTCAGTCCTGCAGGCTCCTGTTCTCCC...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCCACAGGCCAGGGAAGTaGATGAGCCAGCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TATRRVLRTARAAKTSFCHRPGK*MSQPSC
Trigger: GCAGGAGGGCTGGCTCATTCACTTCCCTGGCCTGTG...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCGCTCTCCTTTGGGTCTaGCCCCCATTCCTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGALLWV*PPFLLL
Trigger: TAGGAGGAGGAATGGGGGTCAGACCCAAAGGAGAGC...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCAGGGGCACTGGGAGTTaGTCCCTTCCCTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGRGTGS*SLPSQR
Trigger: TCTCTGAGAGGGAAGGGAGCAACTCCCAGTGCCCCT...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGGCCTGGACTTCATCTTaGTCTTGCACTTCCACCCCG +
Preference number: 2 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLAWTSS*SCTSTP
Trigger: CGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGC...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCGTGCCTGCTTCCTGGTaGTGTCTGCAGGCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: TATRRVLRTARAAKTSFCVPASW*CLQAEA
Trigger: AGCTTCAGCCTGCAGACATCACCAGGAAGCAGGCAC...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp CCAAGTGAGGGGAGGAGAGAGGCCACTTTCTCCCAGTGTGGGGGCTaGGCAAGAACAGAACCAAAGACAACAGGAGGGACATACACAGGT +
Preference number: 2 (lower is better)
Translates to: PSEGRREATFSQCGG*ARTEPKTTGGTYTG
Trigger: ACCTGTGTATGTCCCTCCTGTTGTCTTTGGTTCTGTTCTTGCCAAGCCCCCACACTGGGAGAAAGTGGCCTCTCTCCTCCCCTCACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCAATGGGTCTACTTCCTaGGAGTGGGAGCACTGGTTG +
Preference number: 2 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGNGSTS*EWEHWL
Trigger: CAACCAGTGCTCCCACTCTCAGGAAGTAGACCCATT...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGATTGGCAGTCCCTTTaGTCAGGAGGCCGCCACACA +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLDWQSL*SGGRHT
Trigger: TGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp ACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTaGGTCTTGCACTTCCACCCCGACCGTGCCGAGTCAACAAAGTTC +
Preference number: 2 (lower is better)
Translates to: TSHNLSFNQSSLDFI*VLHFHPDRAESTKF
Trigger: GAACTTTGTTGACTCGGCACGGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTATCGAAAGGCTATCCTaGACCTCTGGTTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCIERLS*TSGFQR
Trigger: TCTCTGAAAACCAGAGGTTCAGGATAGCCTTTCGAT...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAAGCCTTGGAAGAGGCTaGTCAGGACAGATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQSLGRG*SGQMAS
Trigger: ACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCT...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACAGAGACTTACACAGCCTaGACAGCCTGGGAAGTTGGC +
Preference number: 2 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTETYTA*TAWEVG
Trigger: GCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTC...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGTGAGATGGGGTGCCTaGTTCCTGGTGATGTCTGCA +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLVRWGA*FLVMSA
Trigger: TGCAGACATCACCAGGAAGCAGGCACCCCATCTCAC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGAAAGGAGAAGACGGTaGTGTGATGGGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLERRRR*CDGGGE
Trigger: CTCACCTCCCCCATCACAGCACCGTCTTCTCCTTTC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCTGCTCTTCTCTGTTATaGAGTGTCTTGGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTCSSLL*SVLGER
Trigger: CCTCTCTCCCAAGACACTCCATAACAGAGAAGAGCA...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGTAGTGAACATCTGCTaGTGGTGCCAGCCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLVVNIC*WCQPVP
Trigger: TGGCACTGGCTGGCACCACCAGCAGATGTTCACTAC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp CCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTaGGGAGCCATAGTTACCAAATGGCATGGAGAGGTGCCATCTCAA +
Preference number: 2 (lower is better)
Translates to: PSQRLTQPAQPGKLA*GAIVTKWHGEVPSQ
Trigger: TTGAGATGGCACCTCTCCATGCCATTTGGTAACTATGGCTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCTGGAGGGCTGAGTTTTaGGAAGGAACCTCACACAAC +
Preference number: 2 (lower is better)
Translates to: TATRRVLRTARAAKTSFCWRAEF*EGTSHN
Trigger: GTTGTGTGAGGTTCCTTCTCAAAACTCAGCCCTCCA...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAATCCAGGAGGAAGGGGTaGTCTTCCTCAGTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQSRRKG*SSSVPL
Trigger: AAGGGGCACTGAGGAAGAGCACCCCTTCCTCCTGGA...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTCCCCTTAGGGGTGTTTaGACATGTGCTTGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFPLRGV*TCACAC
Trigger: ACACGCACAAGCACATGTGCAAACACCCCTAAGGGG...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGAGGCTGACTTCTCTCTaGCCTCCAAACCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLRLTSL*PPNPLS
Trigger: AGAGAGAGGGTTTGGAGGCCAGAGAGAAGTCAGCCT...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGCCCGCCATGTTAGATaGGGAAAGGGCTGTGCAGTC +
Preference number: 2 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQARHVR*GKGCAV
Trigger: GACTGCACAGCCCTTTCCCCATCTAACATGGCGGGC...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCTGTTTTCAAAACTCTTaGGCAGCCACCTCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: TATRRVLRTARAAKTSFCCFQNS*AATSQG
Trigger: GCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACA...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGAAACAGCTTACAGAGTaGCAACAGGAACCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMKQLTE*QQEPWK
Trigger: CTTCCAAGGTTCCTGTTGCCACTCTGTAAGCTGTTT...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGTTCCAGCCATCCAAATaGGTCTACTTCCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWEFQPSK*VYFLRV
Trigger: CACTCTCAGGAAGTAGACCCATTTGGATGGCTGGAA...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp GAACAGAAAAAGAACTTCATTGTTAAAGCCAAGGGGCACTGGGAGTaGCTCCCTTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EQKKNFIVKAKGHWE*LPSLSETYTACTAW
Trigger: CCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAAGGGAGCAACTCCCAGTGCCCCTTGGCTTTAACAATGAAGTTCTTTTTCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp CACCCCCAGGTAAACTTCTCAGCAGACATTGAGGTAGTGCCTGGGTaGACCCTTGGGCAAAGTAAGGTAACTGAGGCAGAAGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: HPQVNFSADIEVVPG*TLGQSKVTEAEAKK
Trigger: CTTCTTTGCTTCTGCCTCAGTTACCTTACTTTGCCCAAGGGTCAACCCAGGCACTACCTCAATGTCTGCTGAGAAGTTTACCTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGATTAAGGACCCAATCTaGAATGTTTGTTCCTGCGTG +
Preference number: 2 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMIKDPI*NVCSCV
Trigger: CACGCAGGAACAAACATTTCAGATTGGGTCCTTAAT...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGTTCCTCAGTGCCCCTTaGATACACATGGCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLFLSAP*IHMARR
Trigger: TCTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAA...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGAGCTGAGCCACAGCTaGCTTTATTACCAGAGGATT +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLELSHS*LYYQRI
Trigger: AATCCTCTGGTAATAAAGGCAGCTGTGGCTCAGCTC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GTGGGCACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTTGGCAACAGGAACCTTaGAAGCCTCCCCTGTCTCCG +
Preference number: 2 (lower is better)
Translates to: VGTLARKDMKLRTQSEMFWQQEP*KPPLSP
Trigger: CGGAGACAGGGGAGGCTTCCAAGGTTCCTGTTGCCA...AAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAGTACCTTATCCATGCTaGGAGAGACACAAGAATGGA +
Preference number: 2 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQVPYPC*ERHKNG
Trigger: TCCATTCTTGTGTCTCTCCCAGCATGGATAAGGTAC...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp TCTGAAATGTTTGTTCCTGCGTGGGAGAAGTCTGATCCATGCAGTTaGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SEMFVPAWEKSDPCS*VTANSTKGTVHKGL
Trigger: CAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCAAGTGCATTCCAGTATaGAAAATGTCATTGAGTGTC +
Preference number: 2 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGKCIPV*KMSLSV
Trigger: GACACTCAATGACATTTTTCATACTGGAATGCACTT...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGCTAGTGATAGCTTGTaGTCATGGTTAAACTGGGTA +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLASDSL*SWLNWV
Trigger: TACCCAGTTTAACCATGAGCACAAGCTATCACTAGC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGAACCAGAAGGGGTTATaGTCTGTAAATACCCAGACT +
Preference number: 2 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLNQKGL*SVNTQT
Trigger: AGTCTGGGTATTTACAGAGCATAACCCCTTCTGGTT...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGATCAACCAGAGCAGCCTaGACTTCATCTTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGSTRAA*TSSWSC
Trigger: GCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGA...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTAAACTAAGAGATAAATaGAAGGGCTGGGATGGCGAT +
Preference number: 2 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFKLRDK*KGWDGD
Trigger: ATCGCCATCCCAGCCCTTCCATTTATCTCTTAGTTT...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCTCCAGGTCAGAAGCCTaGGTCCACATAATCCCCTTT +
Preference number: 2 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFSRSEA*VHIIPF
Trigger: AAAGGGGATTATGTGGACCCAGGCTTCTGACCTGGA...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCAACTTTATTCTCCTGTaGTATGGCCAGGCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCNFILL*YGQAEP
Trigger: AGGCTCAGCCTGGCCATACCACAGGAGAATAAAGTT...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGACAGCCTGCACAGCCTaGGAAGTTGGCTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLTACTA*EVGFGS
Trigger: GCTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGT...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAAATAACACTATTTTCTaGACTACCTTCCCACTGTTG +
Preference number: 2 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQNNTIF*TTFPLL
Trigger: CAACAGTGGGAAGGTAGTTCAGAAAATAGTGTTATT...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACATCAAATTACTTGTGGTaGATAAAGAGGGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTSNYLW*IKRERS
Trigger: ACTCCTCTCCCTCTTTATTCACCACAAGTAATTTGA...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCCAGTGCTTGTCAAACTaGCTTAAACAGAGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFQCLSN*LKQSPW
Trigger: CCAAGGGCTCTGTTTAAGCCAGTTTGACAAGCACTG...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACAGATAGCTTGTGCTCATaGTTAAACTGGGTAGATCTA +
Preference number: 2 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTDSLCS*LNWVDL
Trigger: TAGATCTACCCAGTTTAACCATGAGCACAAGCTATC...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGCCATCAGCACTGGAGTaGTGGAAGGGGATTCTAGGT +
Preference number: 2 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLPSALE*WKGILG
Trigger: ACCTAGAATCCCCTTCCATCACTCCAGTGCTGATGG...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGCTATCCTGAACCTCTaGTTTTCAGAGAAAACAGCT +
Preference number: 2 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQAILNL*FSEKTA
Trigger: AGCTGTTTTCTCTGAAAACCAGAGGTTCAGGATAGC...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTAAGATCAATCATTCTTaGAAGGAGCCTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPKINHS*KEPVFL
Trigger: GAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTT...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGGCGGTAGAGTTTCTCTaGTCTGGCAAGCCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLAVEFL*SGKPSL
Trigger: CAGAGAAGGCTTGCCAGACCAGAGAAACTCTACCGC...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTTGGAATGCCCGAAGGTaGAGGCCTGAGCAGATTCAA +
Preference number: 2 (lower is better)
Translates to: DKDNYAQYQRTSYENPGVWNARR*RPEQIQ
Trigger: TTGAATCTGCTCAGGCCTCCACCTTCGGGCATTCCA...AACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGGGCTTCCATCAGCACTaGAGTGATGGAAGGGGATTC +
Preference number: 2 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLGFHQH*SDGRGF
Trigger: GAATCCCCTTCCATCACTCCAGTGCTGATGGAAGCC...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR TCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAATATGAAAAATGTCATTaGGTGTCACTGGGTCTAGAC +
Preference number: 2 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQYEKCH*VSLGLD
Trigger: GTCTAGACCCAGTGACACTCAATGACATTTTTCATA...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGATTTGTGGCCATTGATTaGTCTTCTCTGTTATGGAGT +
Preference number: 2 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGFVAID*SSLLWS
Trigger: ACTCCATAACAGAGAAGAGCAATCAATGGCCACAAA...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGTGGCAAGAAGACCCTTaGGTTTCTGGTAACTCAAGC +
Preference number: 2 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLWQEDP*VSGNSS
Trigger: GCTTGAGTTACCAGAAACCCAAGGGTCTTCTTGCCA...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGAATACTCTACACTTTGTaGCCATTGATTGCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGILYTL*PLIALL
Trigger: GAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTAT...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTGAACTCGGTGGTAAATaGTTTCTTCTTCATACTCTA +
Preference number: 2 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPELGGK*FLLHTL
Trigger: TAGAGTATGAAGAAGAAACCATTTACCACCGAGTTC...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp TCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATaGATTGCTCTTCTCTGTTATGGAGTGTCTTGGGAGAGAGGTTAC +
Preference number: 2 (lower is better)
Translates to: SVVNGFFFILYTLWP*IALLCYGVSWERGY
Trigger: GTAACCTCTCTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 90 bp CTCATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTaGTGGCCATTGATTGCTCTTCTCTGTTATGGAGTGTCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: LMNSVVNGFFFILYT*WPLIALLCYGVSWE
Trigger: CTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR GCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGAGAAGTCTGATCCATaGAGTTTGGTCACAGCCAAC +
Preference number: 2 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIEKSDP*SLVTAN
Trigger: GTTGGCTGTGACCAAACTGCATGGATCAGACTTCTC...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTCACCAGAAAGTCACCTaGGGAACAGAAAAAGAACTT +
Preference number: 2 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIHQKVT*GTEKEL
Trigger: AAGTTCTTTTTCTGTTCCCCAGGTGACTTTCTGGTG...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGGAGAGACACAAGAATaGATGAAACTTTTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIGETQE*MKLFLE
Trigger: CTCTAGGAAAAGTTTCATCCATTCTTGTGTCTCTCC...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CCA 90 bp GATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTTTTGTCTTTCACCTGTaGTTTTACCCATCTATGCTT +
Preference number: 2 (lower is better)
Translates to: DKDNYAQYQRTSYENPGVFVFHL*FYPSML
Trigger: AAGCATAGATGGGTAAAACCACAGGTGAAAGACAAA...AACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp CCGAGGGAAGGGGAGACTGAAGCTGTAGTGAACATCTaGTGGTGGTGCCAGCCAGTGCCACGGCAACACGGA +
Preference number: 3 (lower is better)
Translates to: PREGETEAVVNI*WWCQPVPRQHG
Trigger: TCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTTCACTACAGCTTCAGTCTCCCCTTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp GGGCTGGGATGGCGATCCCACCCTGGGTCAGGGCAGTaGTTGTCAAACTGGCTTAAACAGAGCCCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: GLGWRSHPGSGQ*LSNWLKQSPWV
Trigger: AACCCAAGGGCTCTGTTTAAGCCAGTTTGACAAGCACTGCCCTGACCCAGGGTGGGATCGCCATCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp GAAGGGGAGACTGAAGCTGTAGTGAACATCTGCTGGTaGTGCCAGCCAGTGCCACGGCAACACGGAGAGTGC +
Preference number: 3 (lower is better)
Translates to: EGETEAVVNICW*CQPVPRQHGEC
Trigger: GCACTCTCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTTCACTACAGCTTCAGTCTCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp AGGGAAGGGGAGACTGAAGCTGTAGTGAACATCTGCTaGTGGTGCCAGCCAGTGCCACGGCAACACGGAGAG +
Preference number: 3 (lower is better)
Translates to: REGETEAVVNIC*WCQPVPRQHGE
Trigger: CTCTCCGTGTTGCCGTGGCACTGGCTGGCACCACCAGCAGATGTTCACTACAGCTTCAGTCTCCCCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp CAGAGAAAACAGCTTACAGAGTGGCAACAGGAACCTTaGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: QRKQLTEWQQEP*KPPLSPPPWEG
Trigger: GCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTTGCCACTCTGTAAGCTGTTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTGATCAGGGGCCAGGGTaGAGGCTGCATCGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPDQGPG*RLHRSP
Trigger: AGGGGACCGATGCAGCCTCAACCCTGGCCCCTGATC...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTAAGGGGCACTGGGAGTaGCTCCCTTCCCTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFKGHWE*LPSLSE
Trigger: CTCTGAGAGGGAAGGGAGCAACTCCCAGTGCCCCTT...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp AGCCAGTGCCACGGCAACACGGAGAGTGCTCAGAACTaGGCGAGCAGCCAAGACTTCATTTTGCCCATAGGA +
Preference number: 3 (lower is better)
Translates to: SQCHGNTESAQN*ASSQDFILPIG
Trigger: TCCTATGGGCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGTGGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp ACCTTCCAGCACAGTGGCAGCATGCGGACTCTGGAGTaGGACCTAGTACTCCCCAGCCTCATCTTAAGGATG +
Preference number: 3 (lower is better)
Translates to: TFQHSGSMRTLE*DLVLPSLILRM
Trigger: CATCCTTAAGATGAGGCTGGGGAGTACTAGGTCCCACTCCAGAGTCCGCATGCTGCCACTGTGCTGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACACAAAGGCTCGGGGTATaGAGAGAATGGGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTQRLGV*REWGTG
Trigger: CCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTG...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTaGCCTCAGAATATAAGGGGTGTTACTGTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: APRAQFTKVWGA*PQNIRGVTVQL
Trigger: CAGCTGCACAGTAACACCCCTTATATTCTGAGGTCAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CAGAGAAGCTTTGACCAAGGCAAAGGCTCGGGGTATTaGGAGAATGGGGCACTGGGCTCACAGTTCCCATGG +
Preference number: 3 (lower is better)
Translates to: QRSFDQGKGSGY*ENGALGSQFPW
Trigger: CCATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCTTGGTCAAAGCTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CACTCTTTCCTCGTCAGCACAGGCCAGGGAAGTGAATaGGCCAGCCCTCCTGCAGAAGACAGGTTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: HSFLVSTGQGSE*ASPPAEDRFSQ
Trigger: CTGAGAAAACCTGTCTTCTGCAGGAGGGCTGGCTCATTCACTTCCCTGGCCTGTGCTGACGAGGAAAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GTCACACTCTTTCCTCGTCAGCACAGGCCAGGGAAGTaGATGAGCCAGCCCTCCTGCAGAAGACAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: VTLFPRQHRPGK*MSQPSCRRQVF
Trigger: GAAAACCTGTCTTCTGCAGGAGGGCTGGCTCATTCACTTCCCTGGCCTGTGCTGACGAGGAAAGAGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CTGCAGGCTGAAGCTGTGAGAATATTCCTAGCCAAGTaGGGGGAGGAGAGAGGCCACTTTCTCCCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: LQAEAVRIFLAK*GEERGHFLPVW
Trigger: CCACACTGGGAGAAAGTGGCCTCTCTCCTCCCCTCACTTGGCTAGGAATATTCTCACAGCTTCAGCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GCCACACACCCAGGCTTCAAGATGTTCTCTCTTCTGTaGTGGTGGGGGAAATTAGAGGGGGAGGATGCCAGC +
Preference number: 3 (lower is better)
Translates to: ATHPGFKMFSLL*WWGKLEGEDAS
Trigger: GCTGGCATCCTCCCCCTCTAATTTCCCCCACCATCACAGAAGAGAGAACATCTTGAAGCCTGGGTGTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp GCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCTTaGACTTCCACCCCGACCGTGCCGAGTCAACAAAGT +
Preference number: 3 (lower is better)
Translates to: ASTRAAWTSSWS*TSTPTVPSQQS
Trigger: ACTTTGTTGACTCGGCACGGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp GAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTaGACTTCATCTTGGTCTTGCACTTCCACCCCGACC +
Preference number: 3 (lower is better)
Translates to: EPHTTSASTRAA*TSSWSCTSTPT
Trigger: GGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp AGGGGTGTTACTGTGCAGCTGTCCAGGTCAGAAGCCTaGGTCCACATAATCCCCTTTGAGATTCAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: RGVTVQLSRSEA*VHIIPFEIQSP
Trigger: GGGGCTCTGAATCTCAAAGGGGATTATGTGGACCCAGGCTTCTGACCTGGACAGCTGCACAGTAACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp CCTCATCTTAAGGATGGCACCATTGCCATCTCGGCTTaGTTTGATGGAATGCCCGAAGGTGGAGGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: PHLKDGTIAISA*FDGMPEGGGLS
Trigger: GCTCAGGCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATCCTTAAGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCCTAGAGAACTCTCATTaGGGAGACTCCAGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGLENSH*GDSRRK
Trigger: CTTCCTCCTGGAGTCTCCCAAATGAGAGTTCTCTAG...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp AGATGGGGTGCCTGCTTCCTGGTGATGTCTGCAGGCTaGAGCTGTGAGAATATTCCTAGCCAAGTGAGGGGA +
Preference number: 3 (lower is better)
Translates to: RWGACFLVMSAG*SCENIPSQVRG
Trigger: TCCCCTCACTTGGCTAGGAATATTCTCACAGCTTCAGCCTGCAGACATCACCAGGAAGCAGGCACCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp TTTGTGACAGCCTTGGAAGAGGCTGATCAGGACAGATaGCAAGTTGGCAGTCACATGTCTGGGGACCTTGGC +
Preference number: 3 (lower is better)
Translates to: FVTALEEADQDR*QVGSHMSGDLG
Trigger: GCCAAGGTCCCCAGACATGTGACTGCCAACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCTGTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTGGGTCAGGGCAGTGCTaGTCAAACTGGCTTAAACAG +
Preference number: 3 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFGSGQC*SNWLKQ
Trigger: CTGTTTAAGCCAGTTTGACAAGCACTGCCCTGACCC...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTACATGTCTGGGGACCTaGGCTGCTTCACATCGAAAG +
Preference number: 3 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFTCLGT*AASHRK
Trigger: CTTTCGATGTGAAGCAGCCAAGGTCCCCAGACATGT...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCGGGCACGAAGGAGAATaGAAGCTCAGGCTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: TATRRVLRTARAAKTSFCGHEGE*KLRLCN
Trigger: ATTACAGAGCCTGAGCTTCAATTCTCCTTCGTGCCC...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAACTCCTGAGCTCTCCTTaGGGTCTGACCCCCATTCCT +
Preference number: 3 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQLLSSP*GLTPIP
Trigger: AGGAATGGGGGTCAGACCCAAAGGAGAGCTCAGGAG...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTTTAAACCCAGGCTTCTaGCTTCTGCAGGCTGCAGAC +
Preference number: 3 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFLNPGF*LLQAAD
Trigger: GTCTGCAGCCTGCAGAAGCAAGAAGCCTGGGTTTAA...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp TGCCCTTGGCAAAGGACTACCTGGAGGGCTGAGTTTTaGGAAGGAACCTCACACAACCTCAGCTTCAACCAG +
Preference number: 3 (lower is better)
Translates to: CPWQRTTWRAEF*EGTSHNLSFNQ
Trigger: CTGGTTGAAGCTGAGGTTGTGTGAGGTTCCTTCTCAAAACTCAGCCCTCCAGGTAGTCCTTTGCCAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp AGAGGAGGTTCCAGCCATCCAAATGGGTCTACTTCCTaGGAGTGGGAGCACTGGTTGAAACTGTGCAGGATG +
Preference number: 3 (lower is better)
Translates to: RGGSSHPNGSTS*EWEHWLKLCRM
Trigger: CATCCTGCACAGTTTCAACCAGTGCTCCCACTCTCAGGAAGTAGACCCATTTGGATGGCTGGAACCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CCAAAGACAACAGGAGGGACATACACAGGTGGTGGGTaGCAACCCTCCTCGGTCTTAAGAGGTCCTTGTTCA +
Preference number: 3 (lower is better)
Translates to: PKTTGGTYTGGG*QPSSVLRGPCS
Trigger: TGAACAAGGACCTCTTAAGACCGAGGAGGGTTGTCACCCACCACCTGTGTATGTCCCTCCTGTTGTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp GAGAACTCTCATTTGGGAGACTCCAGGAGGAAGGGGTaGTCTTCCTCAGTGCCCCTTGAATACACATGGCAA +
Preference number: 3 (lower is better)
Translates to: ENSHLGDSRRKG*SSSVPLEYTWQ
Trigger: TTGCCATGTGTATTCAAGGGGCACTGAGGAAGAGCACCCCTTCCTCCTGGAGTCTCCCAAATGAGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp TTGTTCCTGCGTGGGAGAAGTCTGATCCATGCAGTTTaGTCACAGCCAACAGCACCAAGGGCACAGTTCACA +
Preference number: 3 (lower is better)
Translates to: LFLRGRSLIHAV*SQPTAPRAQFT
Trigger: TGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp GTCACTGGGTCTAGACAGACCCTGTCTCAGAGTCTGTaGATCCCAGGGACCTTCCAGGACAGAATACACAAA +
Preference number: 3 (lower is better)
Translates to: VTGSRQTLSQSL*IPGTFQDRIHK
Trigger: TTTGTGTATTCTGTCCTGGAAGGTCCCTGGGATCCACAGACTCTGAGACAGGGTCTGTCTAGACCCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp AGAACCAAAGACAACAGGAGGGACATACACAGGTGGTaGGTGACAACCCTCCTCGGTCTTAAGAGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: RTKDNRRDIHRW*VTTLLGLKRSL
Trigger: CAAGGACCTCTTAAGACCGAGGAGGGTTGTCACCCACCACCTGTGTATGTCCCTCCTGTTGTCTTTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp TTTAAGTCATTCCTAGTGCATCTGCAGACTACAGATTaGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCC +
Preference number: 3 (lower is better)
Translates to: FKSFLVHLQTTD*QSLCSGGRHTP
Trigger: GGGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGCACTAGGAATGACTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp GAAATGTTTGTTCCTGCGTGGGAGAAGTCTGATCCATaGAGTTTGGTCACAGCCAACAGCACCAAGGGCACA +
Preference number: 3 (lower is better)
Translates to: EMFVPAWEKSDP*SLVTANSTKGT
Trigger: TGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp AAGGGGTGCTCTTCCTCAGTGCCCCTTGAATACACATaGCAAGAAGACCCTTGGGTTTCTGGTAACTCAAGC +
Preference number: 3 (lower is better)
Translates to: KGCSSSVPLEYT*QEDPWVSGNSS
Trigger: GCTTGAGTTACCAGAAACCCAAGGGTCTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAAGAGCACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTCCCCACCACTCCCTTTaGTCTTTCACCTGTGGTTTT +
Preference number: 3 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPPHHSL*SFTCGF
Trigger: AAAACCACAGGTGAAAGACAAAAGGGAGTGGTGGGG...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp TTAGAGATGCCCTTGGCAAAGGACTACCTGGAGGGCTaGGTTTTGAGAAGGAACCTCACACAACCTCAGCTT +
Preference number: 3 (lower is better)
Translates to: LEMPLAKDYLEG*VLRRNLTQPQL
Trigger: AAGCTGAGGTTGTGTGAGGTTCCTTCTCAAAACTCAGCCCTCCAGGTAGTCCTTTGCCAAGGGCATCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GTTCCTGTTACCATTTGTGACAGCCTTGGAAGAGGCTaGTCAGGACAGATGGCAAGTTGGCAGTCACATGTC +
Preference number: 3 (lower is better)
Translates to: VPVTICDSLGRG*SGQMASWQSHV
Trigger: GACATGTGACTGCCAACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCTGTCACAAATGGTAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp TTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTaGCTTTATTACCAGAGGATTCATGTGCGTGCCAGT +
Preference number: 3 (lower is better)
Translates to: LLAVISWELSHS*LYYQRIHVRAS
Trigger: ACTGGCACGCACATGAATCCTCTGGTAATAAAGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp CCTGGGAAGTTGGCTTTGGGAGCCATAGTTACCAAATaGCATGGAGAGGTGCCATCTCAAATACTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PGKLALGAIVTK*HGEVPSQILLP
Trigger: GGGAAGAAGTATTTGAGATGGCACCTCTCCATGCCATTTGGTAACTATGGCTCCCAAAGCCAACTTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CTCTGTAATGCTTTACCCTGTTCCTGTTACCATTTGTaGCAGCCTTGGAAGAGGCTGATCAGGACAGATGGC +
Preference number: 3 (lower is better)
Translates to: LCNALPCSCYHL*QPWKRLIRTDG
Trigger: GCCATCTGTCCTGATCAGCCTCTTCCAAGGCTGTCACAAATGGTAACAGGAACAGGGTAAAGCATTACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp TGGCAAGCCTTCTCTGCATGCTCAAGCTCACAAGGTTaGCACTGGTTTCAAGCCTATTCTCAATGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: WQAFSACSSSQG*HWFQAYSQCSQ
Trigger: CTGAGAGCATTGAGAATAGGCTTGAAACCAGTGTCAACCTTGTGAGCTTGAGCATGCAGAGAAGGCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp CTTTTGAATATAGAGGGACAGGTGAGACCAGCATCCTaGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAATG +
Preference number: 3 (lower is better)
Translates to: LLNIEGQVRPAS*VSKEEVPAIQM
Trigger: CATTTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCCCTCTATATTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGAGCCTGGACTTCATCTaGGTCTTGCACTTCCACCCC +
Preference number: 3 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLSLDFI*VLHFHP
Trigger: GGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCT...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGACTACCTTCCCACTGTaGAAACTTAACTTTATTCTC +
Preference number: 3 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWETTFPL*KLNFIL
Trigger: GAGAATAAAGTTAAGTTTCAACAGTGGGAAGGTAGT...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp CCCTCATTTCAACCCACCTTTCCAGAAAGAGGATTTTaGCTAAGCACAACCATGAAGCTACTTTTCTGCCCG +
Preference number: 3 (lower is better)
Translates to: PSFQPTFPERGF*LSTTMKLLFCP
Trigger: CGGGCAGAAAAGTAGCTTCATGGTTGTGCTTAGGCAAAATCCTCTTTCTGGAAAGGTGGGTTGAAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp GAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGGGATTTaGATAGATTGTACATTCAGCTTCAGCATGGGTAAC +
Preference number: 3 (lower is better)
Translates to: ERERERERERGI*IDCTFSFSMGN
Trigger: GTTACCCATGCTGAAGCTGAATGTACAATCTATGCAAATCCCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp CAGAAAAAGAACTTCATTGTTAAAGCCAAGGGGCACTaGGAGTTGCTCCCTTCCCTCTCAGAGACTTACACA +
Preference number: 3 (lower is better)
Translates to: QKKNFIVKAKGH*ELLPSLSETYT
Trigger: TGTGTAAGTCTCTGAGAGGGAAGGGAGCAACTCCCAGTGCCCCTTGGCTTTAACAATGAAGTTCTTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp GCAATGAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTaGGAGCTGAGCCACAGCTGCCTTTATTACCAGAGG +
Preference number: 3 (lower is better)
Translates to: AMSFAFLLAVIS*ELSHSCLYYQR
Trigger: CCTCTGGTAATAAAGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGCTTCCTCAGTGCCCCTaGAATACACATGGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLLPQCP*NTHGKK
Trigger: CTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAAG...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GAATACTCCATGCTGTCACTTTCCAGGCAAGAAAGATaGAGCGATACACGGAGAAACACTCCTGATTCATCC +
Preference number: 3 (lower is better)
Translates to: EYSMLSLSRQER*SDTRRNTPDSS
Trigger: GGATGAATCAGGAGTGTTTCTCCGTGTATCGCTTCATCTTTCTTGCCTGGAAAGTGACAGCATGGAGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp AAATTAAGGACCCAATCTGAAATGTTTGTTCCTGCGTaGGAGAAGTCTGATCCATGCAGTTTGGTCACAGCC +
Preference number: 3 (lower is better)
Translates to: KLRTQSEMFVPA*EKSDPCSLVTA
Trigger: GGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAACATTTCAGATTGGGTCCTTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp GAAGTAGGCTCTGCCATTTCCAAGTGCATTCCAGTATaGAAAATGTCATTGAGTGTCACTGGGTCTAGACAG +
Preference number: 3 (lower is better)
Translates to: EVGSAISKCIPV*KMSLSVTGSRQ
Trigger: CTGTCTAGACCCAGTGACACTCAATGACATTTTTCATACTGGAATGCACTTGGAAATGGCAGAGCCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp ACTGCTGATCCGAACCCTCATGAACTCGGTGGTAAATaGTTTCTTCTTCATACTCTACACTTTGTGGCCATT +
Preference number: 3 (lower is better)
Translates to: TADPNPHELGGK*FLLHTLHFVAI
Trigger: AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATGAGGGTTCGGATCAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGCTGTTATGGAGTGTCTaGGGAGAGAGGTTACAGTTT +
Preference number: 3 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLLLWSV*GERLQF
Trigger: AAACTGTAACCTCTCTCCCAAGACACTCCATAACAG...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp TTTCTTCTTCATACTCTACACTTTGTGGCCATTGATTaGTCTTCTCTGTTATGGAGTGTCTTGGGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: FLLHTLHFVAID*SSLLWSVLGER
Trigger: CCTCTCTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp ATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTaGTTGCTCTTCTCTGTTATGGAGTGTCTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: MVSSSYSTLCGH*LLFSVMECLGR
Trigger: TCTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CCA 72 bp TTCAGTACCTTATCCATGCTGGGAGAGACACAAGAATaGATGAAACTTTTCCTAGAGAACTCTCATTTGGGA +
Preference number: 3 (lower is better)
Translates to: FSTLSMLGETQE*MKLFLENSHLG
Trigger: TCCCAAATGAGAGTTCTCTAGGAAAAGTTTCATCCATTCTTGTGTCTCTCCCAGCATGGATAAGGTACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp GATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTAGAAAAAGAACTTCATaGTTAAAGCCAAGGGGCACT +
Preference number: 3 (lower is better)
Translates to: DKDNYAQYQRTSYENPGVRKRTS*LKPRGT
Trigger: AGTGCCCCTTGGCTTTAACAATGAAGTTCTTTTTCT...AACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR-3UTR CAA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGTTCATACTCTACACTTaGTGGCCATTGATTGCTCTT +
Preference number: 3 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLFILYT*WPLIAL
Trigger: AAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAA...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR GCA 72 bp TTATCTATCGGAAAACTAGACAACCAGAAGGGGTTATaGTCTGTAAATACCCAGACTACATCCAAAGTAGCA +
Preference number: 3 (lower is better)
Translates to: LSIGKLDNQKGL*SVNTQTTSKVA
Trigger: TGCTACTTTGGATGTAGTCTGGGTATTTACAGAGCATAACCCCTTCTGGTTGTCTAGTTTTCCGATAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR TCA 72 bp CTACTAAGCAGAAACCTGGAGTCTTATAGTTTAATGTaGGCTGTTCTTTTTGCACTCTTAACTCTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LLSRNLESYSLM*AVLFALLTLAF
Trigger: GAAAGCCAGAGTTAAGAGTGCAAAAAGAACAGCTCACATTAAACTATAAGACTCCAGGTTTCTGCTTAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCCGGAGTCCAGGCTGCTaGAATTCCACACCACCAGCG +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSRSPGC*NSTPPA
Trigger: CGCTGGTGGTGTGGAATTTCAGCAGCCTGGACTCCG...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCTGCTCTGCAGGTAGGTaGACAGGAGGCTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSCSAGR*TGGWLH
Trigger: GTGGAGCCAGCCTCCTGTCCACCTACCTGCAGAGCA...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCGGACAAAGGCGATTCTaGCTGGGTTGGCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSGQRRF*LGWQAC
Trigger: ACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCC...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGAGCGGAGGCCCGGGGTaGCCGCAGGATAGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMSGGPG*PQDSSR
Trigger: ACGGGAACTATCCTGCGGGCACCCCGGGCCTCCGCT...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGCGGGCTGCGGGCAGATaGGCAGCCAGGTCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLRAAGR*AARSLR
Trigger: GCGCAGGGACCTGGCTGCCCATCTGCCCGCAGCCCG...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCGTAGGCACTGCGAGGTaGCCCATTGTGCAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSVGTAR*PIVQLQ
Trigger: TTGAAGCTGCACAATGGGCCACCTCGCAGTGCCTAC...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCGGGGCTTGTAGTGTGTaGATTCCGCAGTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSGACSV*IPQWTQ
Trigger: TTGAGTCCACTGCGGAATTCACACACTACAAGCCCC...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCTCTGCTTCTGGGTCCTaGGGGCGAAGTTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSSASGS*GRSCCY
Trigger: ATAACAGCAACTTCGCCCCCAGGACCCAGAAGCAGA...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTTGGCTCCACCCCAAATaGTGGCCATCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCWLHPK*WPSSRR
Trigger: CCTCCTGGAGGATGGCCACCATTTGGGGTGGAGCCA...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCCAGTCACGGTCACATTaGGCCCCTTTCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSQSRSH*APFPIS
Trigger: AGAAATGGGGAAAGGGGCCCAATGTGACCGTGACTG...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCAGGCGGTCCAGGCCCTaGTTCCGGATGAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTRRSRP*FRMNLA
Trigger: TGCAAGGTTCATCCGGAAGCAGGGCCTGGACCGCCT...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAAGGTCCTCCGCGGGCTaGGGGCAGATGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQRSSAG*GQMGSQ
Trigger: CTGGCTGCCCATCTGCCCGCAGCCCGCGGAGGACCT...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCTGGCATCCCAGTCAGTaGCAACCTCAGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSWHPSQ*QPQKTE
Trigger: TTCAGTTTTCTGAGGTTGGCACTGACTGGGATGCCA...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCGAGGCAGCACCTCCTTaGGGCCTTTCCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TATRRVLRTARAAKTSFCEAAPP*GLSPGL
Trigger: CAGTCCTGGGGAAAGGCCCCAAGGAGGTGCTGCCTC...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGGACTGCACCCAGCTCTaGCTTGGGATCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMDCTQL*LGIRAE
Trigger: TTCAGCCCTGATCCCAAGTCAGAGCTGGGTGCAGTC...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCTCCCTTGGCTACTGTTaGCTGTGGCTTTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTSLGYC*LWLSPE
Trigger: CTCGGGAGAAAGCCACAGGCAACAGTAGCCAAGGGA...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTCGGTGGGGCCTGTGGTaGAGATGTCCATGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFRWGLW*RCPWQS
Trigger: GGACTGCCATGGACATCTGCACCACAGGCCCCACCG...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCGCTCTTTCTGCCTGCTaGGGGGCTTCTTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGALSAC*GASLPA
Trigger: AGCTGGCAAAGAAGCCCCCCAGCAGGCAGAAAGAGC...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGCCCTGTCGTTTGTCCTaGGCATCCAGCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLPCRLS*ASSFLC
Trigger: GCAGAGAAAGCTGGATGCCCAGGACAAACGACAGGG...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTCCACTCTTCCTGGCATaGCTGTGTCTTGAGAGATCC +
Preference number: 4 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCPLFLA*LCLERS
Trigger: GGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGG...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGAGGTGGACAGGAGGCTaGCTCCACCCCAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWERWTGG*LHPKWW
Trigger: CCACCATTTGGGGTGGAGCCAGCCTCCTGTCCACCT...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCTCACCAGGTCATCTGTaGAGAATGCCACATACTCTA +
Preference number: 4 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSSPGHL*RMPHTL
Trigger: TAGAGTATGTGGCATTCTCCACAGATGACCTGGTGA...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp CTGGGATGGCGATCCCACCCTGGGTCAGGGCAGTGCTaGTCAAACTGGCTTAAACAGAGCCCTTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGWRSHPGSGQC*SNWLKQSPWVQ
Trigger: CTGAACCCAAGGGCTCTGTTTAAGCCAGTTTGACAAGCACTGCCCTGACCCAGGGTGGGATCGCCATCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCAGTCCAGCTGCCCAATaGTCTCCTGGTTCACTATGG +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTSPAAQ*SPGSLW
Trigger: CCATAGTGAACCAGGAGATCATTGGGCAGCTGGACT...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAGGCTACTGTTGCCTGTaGCTTTCTCCCGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQGYCCL*LSPEEA
Trigger: TGCCTCCTCGGGAGAAAGCCACAGGCAACAGTAGCC...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGCATTGTCGTACTGCCTaGAGAACTGGAGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLHCRTA*RTGALA
Trigger: GGCAAGTGCTCCAGTTCTCCAGGCAGTACGACAATG...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCACCATGGTGTCACAGTaGGGGCTGTTCTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTTMVSQ*GLFSRT
Trigger: GGTTCTAGAGAACAGCCCCCACTGTGACACCATGGT...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGTTCGGGCAAAGAAGGTaGGCCGGGCTGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLFGQRR*AGLSAG
Trigger: TCCAGCAGACAGCCCGGCCCACCTTCTTTGCCCGAA...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCTGGTGCAGATGTCCATaGCAGTCCAAGTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGWCRCP*QSKSHP
Trigger: TGGGTGGGACTTGGACTGCCATGGACATCTGCACCA...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTaGGTCTTGCACTTCCACCCCGACCGTGCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: NLSFNQSSLDFI*VLHFHPDRAES
Trigger: TGACTCGGCACGGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp TCAGAGAAAACAGCTTACAGAGTGGCAACAGGAACCTaGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SEKTAYRVATGT*EASPVSASLGR
Trigger: CCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTTGCCACTCTGTAAGCTGTTTTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTGGCCCTGCTTCCGGATaGACCTTGCATTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPGPASG*TLHCPG
Trigger: GCCGGGACAATGCAAGGTTCATCCGGAAGCAGGGCC...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGGCCACTGGCACCCAGTaGTGGAGAATCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWEATGTQ*WRIFTV
Trigger: GACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGC...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCCCCTTTCCCCATTTCTaGATCCCCACCGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVPFPHF*IPTGSS
Trigger: GGATGAGCCGGTGGGGATGCAGAAATGGGGAAAGGG...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GATGGCACCATTGCCATCTCGGCTTGGTTTGATGGAATGCCCGAAGGTGGAGGCCACCACCACTCTTCCTaGCATGGCTGTGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: DGTIAISAWFDGMPEGGGHHHSS*HGCVLR
Trigger: TCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTG...GCCTCCACCTTCGGGCATTCCATCAAACCAAGCCGAGATGGCAATGGTGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTAGAACTGCTTCATCTTaGTCACCAGGTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCRTASS*SPGHLW
Trigger: CCACAGATGACCTGGTGACCAAGATGAAGCAGTTCT...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCTaGCACTTCCACCCCGACCGTGCCGAGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SFNQSSLDFILV*HFHPDRAESTK
Trigger: CTTTGTTGACTCGGCACGGTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp CAGCCTTGGAAGAGGCTGATCAGGACAGATGGCAAGTaGGCAGTCACATGTCTGGGGACCTTGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QPWKRLIRTDGK*AVTCLGTLAAS
Trigger: TGAAGCAGCCAAGGTCCCCAGACATGTGACTGCCAACTTGCCATCTGTCCTGATCAGCCTCTTCCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAATCTGGCTGGTGTTTCTaGTTCTGGGTCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQSGWCF*FWVLGA
Trigger: CGCCCCCAGGACCCAGAAGCAGAAACACCAGCCAGA...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAACTAGTAGATCCCGCATaGTCTGCAGGTAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQLVDPA*SAGRWT
Trigger: TGTCCACCTACCTGCAGAGCATGCGGGATCTACTAG...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTCACCATCCACAGCAATaGCCTCTGGGATCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPHHPQQ*PLGSAG
Trigger: ACCGGCGGATCCCAGAGGGCATTGCTGTGGATGGTG...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGTGGGCAGGATTGATGTaGAGGCTGAGGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLWAGLM*RLRTGF
Trigger: GAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCA...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGACAGTGGACTTGGTTGTaGATCCCTCGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGQWTWL*IPRPGG
Trigger: GCCTCCCGGGCGAGGGATCCACAACCAAGTCCACTG...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGTCCGAACTTTCTCTTTaGGACGGTGAGAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLSELSL*DGERSS
Trigger: GCTACTTCTCTCACCGTCCCAAAGAGAAAGTTCGGA...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCTGGTGTTTCTGCTTCTaGGTCCTGGGGGCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVWCFCF*VLGAKL
Trigger: CAACTTCGCCCCCAGGACCCAGAAGCAGAAACACCA...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGTTTGCCAGCTCTGGCTaGTGTTTCTGCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWEFASSG*CFCFWV
Trigger: GACCCAGAAGCAGAAACACCAGCCAGAGCTGGCAAA...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGGCATCCTCATCCCACTaGACATTCTTGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLASSSH*TFLLAL
Trigger: CAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGC...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGAAAGGCGATTCTGACTaGGTTGGCAGGCATGTACTC +
Preference number: 4 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMKGDSD*VGRHVL
Trigger: GAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTT...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCGCCGATGCAGGTAATTaGAACGCTTATCCACATGGA +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTADAGN*NAYPHG
Trigger: TCCATGTGGATAAGCGTTCCAATTACCTGCATCGGC...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAGGTTGTTATCCACCATaGTGTCACAGTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQGCYPP*CHSGGC
Trigger: ACAGCCCCCACTGTGACACCATGGTGGATAACAACC...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTGGTCACAGCCAACAGCACCAAGGGCACAGTTCACAAAGGTCTGGGGCGCCTGTGCCCAATGATCTCCTaGTTCACTATGGCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: LVTANSTKGTVHKGLGRLCPMIS*FTMASN
Trigger: GTTCGAAGCCATAGTGAACCAGGAGATCATTGGGCA...CAGGCGCCCCAGACCTTTGTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCTTGATCAGAAAGCCCTaGAATCGGTCAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTLIRKP*NRSARK
Trigger: CTTCCTTGCTGACCGATTCCAGGGCTTTCTGATCAA...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCGTGCAGGCTGAGGACTaGGTTCAGGCTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVVQAED*VQALET
Trigger: AGTTTCCAGAGCCTGAACCCAGTCCTCAGCCTGCAC...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp ACTCCAGGAGGAAGGGGTGCTCTTCCTCAGTGCCCCTaGAATACACATGGCAAGAAGACCCTTGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TPGGRGALPQCP*NTHGKKTLGFL
Trigger: CAGAAACCCAAGGGTCTTCTTGCCATGTGTATTCAAGGGGCACTGAGGAAGAGCACCCCTTCCTCCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGACTTGGGATCAGGGCTaGAGGAACTCCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLTWDQG*RNSRLF
Trigger: AAACAGCCTGGAGTTCCTTCAGCCCTGATCCCAAGT...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp TTCCCTCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTTGGGAGAGCTTTCTCTGCAAATaGTCTTTCTGCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPLRDLHSLHSLGSWLWESFLCK*SFCLLG
Trigger: CCCCAGCAGGCAGAAAGAGCATTTGCAGAGAAAGCT...CTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTCATTCTCAAAGTCCTTaGGGACTGAGTTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCHSQSP*GLSSHC
Trigger: ACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATG...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTGAGAGATCCTTCCCTTaGCTACTGTTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFERSFP*LLLPVA
Trigger: AGCCACAGGCAACAGTAGCCAAGGGAAGGATCTCTC...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCCCACCGGCTCATCCATaGGCCCCAAAAGACCACCAA +
Preference number: 4 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCPPAHP*APKDHQ
Trigger: TTGGTGGTCTTTTGGGGCCCATGGATGAGCCGGTGG...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AGTAGCTGTCTCCTAGCCCAGGGGCACGAAGGAGAATaGAAGCTCAGGCTCTGTAATGCTTTACCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSCLLAQGHEGE*KLRLCNALPCS
Trigger: GGAACAGGGTAAAGCATTACAGAGCCTGAGCTTCAATTCTCCTTCGTGCCCCTGGGCTAGGAGACAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp TTTGTTCCTGCGTGGGAGAAGTCTGATCCATGCAGTTaGGTCACAGCCAACAGCACCAAGGGCACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FVPAWEKSDPCS*VTANSTKGTVH
Trigger: GTGAACTGTGCCCTTGGTGCTGTTGGCTGTGACCAAACTGCATGGATCAGACTTCTCCCACGCAGGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AGACTTACACAGCCTGCACAGCCTGGGAAGTTGGCTTaGGGAGCCATAGTTACCAAATGGCATGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RLTQPAQPGKLA*GAIVTKWHGEV
Trigger: CACCTCTCCATGCCATTTGGTAACTATGGCTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTTGGTCACGTGATGCTTaGTCAGAAAGCCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFWSRDA*SESPGI
Trigger: GATTCCAGGGCTTTCTGATCAAGCATCACGTGACCA...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp ACCAGAGGATTCATGTGCGTGCCAGTAAGACCACACTCCCCACCACTCCCTTTTCCAGTGTCTCCAGTTTaGTCACAGCAAGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TRGFMCVPVRPHSPPLPFPVSPV*SQQGWS
Trigger: TGACCAACCTTGCTGTGAGCAAACTGGAGACACTGG...AAAAGGGAGTGGTGGGGAGTGTGGTCTTACTGGCACGCACATGAATCCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACAAAGGAATTTGGTCTCTaGCACTGGCACCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTKEFGL*HWHPVM
Trigger: CATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTT...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAAGCTGGGTGGCCCATTaGGTAGTACCTGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FPEMMVLCFQNSWAATSQSWVAH*VVPAAV
Trigger: AACAGCTGCAGGTACTACCCAATGGGCCACCCAGCT...TTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCGGAACAGCCTCTCCTTaGCATCCCAGTCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCGTASP*HPSQCQ
Trigger: TTGGCACTGACTGGGATGCCAAGGAGAGGCTGTTCC...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCCATTCTTGTTGGCTTTaGCTTCTAGGGGACAGAATC +
Preference number: 4 (lower is better)
Translates to: TATRRVLRTARAAKTSFCHSCWL*LLGDRI
Trigger: GATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATG...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGATACTGCCTGGAGAACTaGAGCACTTGCCGATGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGYCLEN*STCRCR
Trigger: CCTGCATCGGCAAGTGCTCCAGTTCTCCAGGCAGTA...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCAGAAATGCTACCAGCTaGTCATTTGTCCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVRNATS*SFVLMG
Trigger: CCCCATCAGGACAAATGACCAGCTGGTAGCATTTCT...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp TCTCAGAGACTTACACAGCCTGCACAGCCTGGGAAGTaGGCTTTGGGAGCCATAGTTACCAAATGGCATGGA +
Preference number: 4 (lower is better)
Translates to: SQRLTQPAQPGK*ALGAIVTKWHG
Trigger: TCCATGCCATTTGGTAACTATGGCTCCCAAAGCCAACTTCCCAGGCTGTGCAGGCTGTGTAAGTCTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCCTGAGATGGCCTCCTTaGCAGAGATATCACACTTGG +
Preference number: 4 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCLRWPP*QRYHTW
Trigger: CCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAG...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp GTTCCCGGAGATGATGGTTCTGTGTTTTCAAAACTCTaGGGCAGCCACCTCCCAAGGCTGTTGTTTCACCAA +
Preference number: 4 (lower is better)
Translates to: VPGDDGSVFSKL*GSHLPRLLFHQ
Trigger: TTGGTGAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCATCATCTCCGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp CCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTaGTCTTTGGCTTCCATCAGCACTGGAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: PNTSELPMKTLG*SLASISTGVME
Trigger: TTCCATCACTCCAGTGCTGATGGAAGCCAAAGACAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCAAAGTCCTTGGGGACTaGGTTCTCATTGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCKVLGD*VLIVAV
Trigger: GACAGCAACAATGAGAACTCAGTCCCCAAGGACTTT...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGGGTTAGTAAAAGCATCCTGGGGGCGAAGTTaGTGTTATCCACATTCTCAA +
Preference number: 4 (lower is better)
Translates to: GIERMGHWAHSSHGLVKASWGRS*CYPHSQ
Trigger: TTGAGAATGTGGATAACAGCAACTTCGCCCCCAGGA...TGCTTTTACTAACCCATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GAGTTTTGCTTTCTTGCTTGCTGTAATAAGCTGGGAGCTGAGCCACAGCTGCCTGCATCCAGCTTTCTCTaGAAATGCTCTTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EFCFLACCNKLGAEPQLPASSFL*KCSFCL
Trigger: CAGGCAGAAAGAGCATTTGCAGAGAAAGCTGGATGC...AGGCAGCTGTGGCTCAGCTCCCAGCTTATTACAGCAAGCAAGAAAGCAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCCTTCTTTGCCAGCTCTaGCTGGTGTTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFLLCQL*LVFLLL
Trigger: CAGAAGCAGAAACACCAGCCAGAGCTGGCAAAGAAG...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GTGGGCACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTCAGAGATATCACACTTaGGGGCCTGGTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: VGTLARKDMKLRTQSEMFQRYHT*GPGQTW
Trigger: CCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTG...AAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp TCTTGGGAGAGAGGTTACAGTTTCAATGAACATCCTCTTATCTATCGGAAAACTCGAGAGGCACGGCCATaGACCACCAGGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SWERGYSFNEHPLIYRKTREARP*TTRTKA
Trigger: CGCCTTTGTCCTGGTGGTCCATGGCCGTGCCTCTCG...AGTTTTCCGATAGATAAGAGGATGTTCATTGAAACTGTAACCTCTCTCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp GTAAACTTCTCAGCAGACATTGAGGTAGTGCCTGGGTaGACCCTTGGGCAAAGTAAGGTAACTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VNFSADIEVVPG*TLGQSKVTEAE
Trigger: TTCTGCCTCAGTTACCTTACTTTGCCCAAGGGTCAACCCAGGCACTACCTCAATGTCTGCTGAGAAGTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp ATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGCCTGGGTCTCTAGGGTaGTCAGTGGACTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: IKTIMPNTSELPMKTLGLPGSLG*SVDLVV
Trigger: CACAACCAAGTCCACTGATCACCCTAGAGACCCAGG...CAACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp TCTTGGGAGAGAGGTTACAGTTTCAATGAACATCCTCTTATCTATCGGAAAACTGCCGTCCGTCAGGTTTaGCTGCACCCAGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SWERGYSFNEHPLIYRKTAVRQV*LHPALT
Trigger: AGTCAGAGCTGGGTGCAGTCAAACCTGACGGACGGC...AGTTTTCCGATAGATAAGAGGATGTTCATTGAAACTGTAACCTCTCTCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GGACAGGTGAGACCAGCATCCTGGGTAAGCAAAGAGGAGGTTCCAGCCATCCAAATATCTGGAAAGAAATaGTACCAGCTGGTCATTTGT +
Preference number: 4 (lower is better)
Translates to: GQVRPASWVSKEEVPAIQISGKK*YQLVIC
Trigger: ACAAATGACCAGCTGGTAGCATTTCTTTCCAGATAT...TTGGATGGCTGGAACCTCCTCTTTGCTTACCCAGGATGCTGGTCTCACCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGCTCCATGTAGGCACTaGGAGGTGGCCCATTGTGCA +
Preference number: 4 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIAPCRH*EVAHCA
Trigger: TGCACAATGGGCCACCTCGCAGTGCCTACATGGAGC...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTATCTCCTGGCGACAATaGTTGGACTTAGCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIISWRQ*LDLARV
Trigger: GACCCGCGCTAAGTCCAAGCATTGTCGCCAGGAGAT...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGTTCCTGGGTCAGTGCTGAGATaGCCTCCTTGCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: TLARKDMKLRTQSEMFVPGSVLR*PPCQRY
Trigger: ATATCTCTGGCAAGGAGGCCATCTCAGCACTGACCC...AGGAACAAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCTCATATCTCGATATCTaGAAAGAAATGCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVSYLDI*KEMLPA
Trigger: AGCTGGTAGCATTTCTTTCCAGATATCGAGATATGA...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGTTCCTGAACTCCAGGCTGTTTaGCTGCAGGTCTGCATGACT +
Preference number: 4 (lower is better)
Translates to: TLARKDMKLRTQSEMFVPELQAV*LQVCMT
Trigger: AGTCATGCAGACCTGCAGCCAAACAGCCTGGAGTTC...AGGAACAAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp CAAGAATGGATGAAACTTTTCCTAGAGAACTCTCATTaGGGAGACTCCAGGAGGAAGGGGTGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QEWMKLFLENSH*GDSRRKGCSSS
Trigger: TGAGGAAGAGCACCCCTTCCTCCTGGAGTCTCCCAAATGAGAGTTCTCTAGGAAAAGTTTCATCCATTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp GTGGGCACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGGAAAAGGTCAAAGGTaGCACAAGGAATTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VGTLARKDMKLRTQSEMFGKGQR*HKEFGL
Trigger: GAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCC...AAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGTGCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGAGATGGACAGAAGCTaGGTGGCCCATTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIEMDRS*VAHWVV
Trigger: TACTACCCAATGGGCCACCCAGCTTCTGTCCATCTC...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR TCA 90 bp TCTTGGGAGAGAGGTTACAGTTTCAATGAACATCCTCTTATCTATCGGAAAACTTGTGGTAGATGGCCTTaGACATGCGCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWERGYSFNEHPLIYRKTCGRWP*TCAVAV
Trigger: GACAGCTACAGCGCATGTTCAAGGCCATCTACCACA...AGTTTTCCGATAGATAAGAGGATGTTCATTGAAACTGTAACCTCTCTCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR GCA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCGTCATCTGTGGAGAATaGCACATACTCTACAAACTT +
Preference number: 4 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFVICGE*HILYKL
Trigger: AAGTTTGTAGAGTATGTGGCATTCTCCACAGATGAC...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp GATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTACTGGACATTCTTGTTaGCTTTGCCTTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DKDNYAQYQRTSYENPGVTGHSC*LCLLGD
Trigger: GTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGT...AACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTTTTGGTCTCTGCCACTaGCACCCAGTGATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIFGLCH*HPVMEN
Trigger: ATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAA...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGTTCCTGTTTCTGCAATCTCCTaGCGACAATGCTTGGACTTA +
Preference number: 4 (lower is better)
Translates to: TLARKDMKLRTQSEMFVPVSAIS*RQCLDL
Trigger: TAAGTCCAAGCATTGTCGCCAGGAGATTGCAGAAAC...AGGAACAAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CCA 90 bp ACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTGTTCCTCTTGAAGACTTTCTTTaGCATCATCCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLARKDMKLRTQSEMFVPLEDFL*HHPCLQ
Trigger: CTGGAGACATGGATGATGCCAAAGAAAGTCTTCAAG...AGGAACAAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATaGATTGCTCTTCTCTGTTATGGAGTGTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NGFFFILYTLWP*IALLCYGVSWE
Trigger: CTCCCAAGACACTCCATAACAGAGAAGAGCAATCAATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
3UTR CAA 72 bp AACAAACAAACAAAAACAAACAGGAGCTGGATATATTaGGCTTCCCTTATTAGCTTAAAGAGTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: NKQTKTNRSWIY*ASLISLKSPLQ
Trigger: TTGCAGTGGACTCTTTAAGCTAATAAGGGAAGCCAAATATATCCAGCTCCTGTTTGTTTTTGTTTGTTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp AACAGGAACCTTGGAAGCCTCCCCTGTCTCCGCCTCCCTGGGAAGGCCGGGAGCGGAGGCAGCACCTCCTaGGGGCCTTTCCCCAGGACT +
Preference number: 5 (lower is better)
Translates to: NRNLGSLPCLRLPGKAGSGGSTS*GPFPRT
Trigger: AGTCCTGGGGAAAGGCCCCAAGGAGGTGCTGCCTCC...GCTCCCGGCCTTCCCAGGGAGGCGGAGACAGGGGAGGCTTCCAAGGTTCCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp GGCTACTGTTGCCTGTGGCTTTCTCCCGAGGAGGCAGCACCTCCTTaGGGCCTTTCCCCAGGACTGACTGGCCCTGTCGTTTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GYCCLWLSPEEAAPP*GLSPGLTGPVVCPG
Trigger: CCCAGGACAAACGACAGGGCCAGTCAGTCCTGGGGAAAGGCCCCAAGGAGGTGCTGCCTCCTCGGGAGAAAGCCACAGGCAACAGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp TTGGGATCAGGGCTGAAGGAACTCCAGGCTGTTTGGCTGCAGGTCTaGATGACTGGGCAGGCGGTGGGGCCTGTGGTGCAGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: LGSGLKELQAVWLQV*MTGQAVGPVVQMSM
Trigger: CATGGACATCTGCACCACAGGCCCCACCGCCTGCCCAGTCATGCAGACCTGCAGCCAAACAGCCTGGAGTTCCTTCAGCCCTGATCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp AGCGCTGTCCCGGTGAAGGCTGCATTCTTCCGGGCCTGTTCGACTTaGGCAGGATTGATGTGCAGGCTGAGGACTGGGTTCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SAVPVKAAFFRACST*AGLMCRLRTGFRLW
Trigger: CCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGGGACAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp CTGGTTCATCGTAGACATTCTCCCAGTAGGAGCGGAGGCCCGGGGTaGCCGCAGGATAGTTCCCGTACAGGTAAGAGTCCAGCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: LVHRRHSPSRSGGPG*PQDSSRTGKSPAAQ
Trigger: TTGGGCAGCTGGACTCTTACCTGTACGGGAACTATCCTGCGGGCACCCCGGGCCTCCGCTCCTACTGGGAGAATGTCTACGATGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp TGGCCTCCTTGCCAGAGATATCACACTTGGGGGCCTGGTCAGACTTaGTTTCGGGGGACCCACCACCACCACTCTTCCTGGCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: WPPCQRYHTWGPGQT*FRGTHHHHSSWHGC
Trigger: ACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CCCCGGTTCGGCACCGCTCCCACTTTCAAGTACCGAAGAGGCCACAGTAGCTGTAAGCTGGGTGGCCCATaGGGTAGTACCTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRFGTAPTFKYRRGHSSCKLGGP*GSTCSC
Trigger: ACAGCTGCAGGTACTACCCAATGGGCCACCCAGCTT...ACAGCTACTGTGGCCTCTTCGGTACTTGAAAGTGGGAGCGGTGCCGAACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp TTCGGGGGACCCACCACCACCACTCTTCCTGGCATGGCTGTGTCTTaGGAGATCCTTCCCTTGGCTACTGTTGCCTGTGGCTTTCTCCCG +
Preference number: 5 (lower is better)
Translates to: FGGPTTTTLPGMAVS*EILPLATVACGFLP
Trigger: CGGGAGAAAGCCACAGGCAACAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp GCTGTCGAGAGGCACGGCCATGGACCACCAGGACAAAGGCGATTCTaGCTGGGTTGGCAGGCATGTACTCCACAGCATCCTCATCCCACT +
Preference number: 5 (lower is better)
Translates to: AVERHGHGPPGQRRF*LGWQACTPQHPHPT
Trigger: AGTGGGATGAGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGTGCCTCTCGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp CCACCACTCTTCCTGGCATGGCTGTGTCTTGAGAGATCCTTCCCTTaGCTACTGTTGCCTGTGGCTTTCTCCCGAGGAGGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PPLFLAWLCLERSFP*LLLPVAFSRGGSTS
Trigger: GGAGGTGCTGCCTCCTCGGGAGAAAGCCACAGGCAACAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp AGTGCTGAGATGGCCTCCTTGCCAGAGATATCACACTTGGGGGCCTaGTCAGACTTGGTTTCGGGGGACCCACCACCACCACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SAEMASLPEISHLGA*SDLVSGDPPPPLFL
Trigger: CAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp TCGAGAGGCACGGCCATGGACCACCAGGACAAAGGCGATTCTGACTaGGTTGGCAGGCATGTACTCCACAGCATCCTCATCCCACTGGAC +
Preference number: 5 (lower is better)
Translates to: SRGTAMDHQDKGDSD*VGRHVLHSILIPLD
Trigger: GTCCAGTGGGATGAGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGTGCCTCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp ATGGTACAGGGTGAGGGCTACATCGCTGAGGGTGTGGATGCCATCTaGTTCATCGTAGACATTCTCCCAGTAGGAGCGGAGGCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: MVQGEGYIAEGVDAI*FIVDILPVGAEARG
Trigger: ACCCCGGGCCTCCGCTCCTACTGGGAGAATGTCTACGATGAACCAGATGGCATCCACACCCTCAGCGATGTAGCCCTCACCCTGTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGCTGCGAGGTGGCCCATaGTGCAGCTTCAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMLRGGP*CSFKAS
Trigger: GGAGGCTTTGAAGCTGCACAATGGGCCACCTCGCAG...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp TCTCTTTGGGACGGTGAGAGAAGTAGCCATCCTGGGTCTCTAGGGTaGTCAGTGGACTTGGTTGTGGATCCCTCGCCCGGGAGGCTAGTG +
Preference number: 5 (lower is better)
Translates to: SLWDGERSSHPGSLG*SVDLVVDPSPGRLV
Trigger: CACTAGCCTCCCGGGCGAGGGATCCACAACCAAGTCCACTGATCACCCTAGAGACCCAGGATGGCTACTTCTCTCACCGTCCCAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp TGCAATCTCCTGGCGACAATGCTTGGACTTAGCGCGGGTCAGTGCTaGGATGGCCTCCTTGCCAGAGATATCACACTTGGGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: CNLLATMLGLSAGQC*DGLLARDITLGGLV
Trigger: GACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACTGACCCGCGCTAAGTCCAAGCATTGTCGCCAGGAGATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp CTTCTCTGGCATCAGCAGCCCCAGCTTGTGGCGACAGTAGGTTTCTaGAATCTCCTGGCGACAATGCTTGGACTTAGCGCGGGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: LLWHQQPQLVATVGF*NLLATMLGLSAGQC
Trigger: GCACTGACCCGCGCTAAGTCCAAGCATTGTCGCCAGGAGATTGCAGAAACCTACTGTCGCCACAAGCTGGGGCTGCTGATGCCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp CCTGGTCAGACTTGGTTTCGGGGGACCCACCACCACCACTCTTCCTaGCATGGCTGTGTCTTGAGAGATCCTTCCCTTGGCTACTGTTGC +
Preference number: 5 (lower is better)
Translates to: PGQTWFRGTHHHHSS*HGCVLRDPSLGYCC
Trigger: GCAACAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp TCAGACTTGGTTTCGGGGGACCCACCACCACCACTCTTCCTGGCATaGCTGTGTCTTGAGAGATCCTTCCCTTGGCTACTGTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SDLVSGDPPPPLFLA*LCLERSFPWLLLPV
Trigger: CACAGGCAACAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp GTCAAAGGTGCCACAAGGAATTTGGTCTCTGCCACTGGCACCCAGTaGTGGAGAATCTTCACTGTCCAGACCCCAGGCCTCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VKGATRNLVSATGTQ*WRIFTVQTPGLRGR
Trigger: TCTGCCTCTGAGGCCTGGGGTCTGGACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp GCATCTGCAGACTACAGATTGGCAGTCCCTTTGCTCAGGAGGCCGCCACACACCTTGGTGATGCGCAGGTaGTTATCCACCATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ASADYRLAVPLLRRPPHTLVMRR*LSTMVS
Trigger: TGACACCATGGTGGATAACAACCTGCGCATCACCAA...GGTGTGTGGCGGCCTCCTGAGCAAAGGGACTGCCAATCTGTAGTCTGCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGGGAACTCCAGGCTGTTaGGCTGCAGGTCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLGTPGC*AAGLHD
Trigger: GTCATGCAGACCTGCAGCCAAACAGCCTGGAGTTCC...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp TGTAGGGATGACTCAGCTCTTCGAAGACCCAGACGGATGAAGGAATaGTACAGGGTGAGGGCTACATCGCTGAGGGTGTGGATGCCATCT +
Preference number: 5 (lower is better)
Translates to: CRDDSALRRPRRMKE*YRVRATSLRVWMPS
Trigger: AGATGGCATCCACACCCTCAGCGATGTAGCCCTCACCCTGTACCATTCCTTCATCCGTCTGGGTCTTCGAAGAGCTGAGTCATCCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp AGGCAAAGGCTCGGGGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGCACTGGACATTCTTGTaGGCTTTGCCTTCTAGGGGA +
Preference number: 5 (lower is better)
Translates to: RQRLGVLREWGTGLTVPMHWTFL*ALPSRG
Trigger: TCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTG...CATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACCCCGAGCCTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp GGAACCTCACACAACCTCAGCTTCAACCAGAGCAGCCTGGACTTCATCTTGGTCGCGATTCTGACTGGGTaGGCAGGCATGTACTCCACA +
Preference number: 5 (lower is better)
Translates to: GTSHNLSFNQSSLDFILVAILTG*AGMYST
Trigger: TGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGC...GACCAAGATGAAGTCCAGGCTGCTCTGGTTGAAGCTGAGGTTGTGTGAGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp CCAGCTCTGGCTGGTGTTTCTGCTTCTGGGTCCTGGGGGCGAAGTTaGTGTTATCCACATTCTCAAAGTCCTTGGGGACTGAGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: PALAGVSASGSWGRS*CYPHSQSPWGLSSH
Trigger: ATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGATAACAGCAACTTCGCCCCCAGGACCCAGAAGCAGAAACACCAGCCAGAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp AGCCTCCTCTGGTTTGATGGGCTGCTTGTTGGAAAAGGTCAAAGGTaGCACAAGGAATTTGGTCTCTGCCACTGGCACCCAGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: SLLWFDGLLVGKGQR*HKEFGLCHWHPVME
Trigger: CTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp GTTGGAAAAGGTCAAAGGTGCCACAAGGAATTTGGTCTCTGCCACTaGCACCCAGTGATGGAGAATCTTCACTGTCCAGACCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGKGQRCHKEFGLCH*HPVMENLHCPDPRP
Trigger: AGGCCTGGGGTCTGGACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCGATCAGTGGACTTGGTaGTGGATCCCTCGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFDQWTW*WIPRPG
Trigger: TCCCGGGCGAGGGATCCACAACCAAGTCCACTGATC...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CCTGAGCAGATTCAAACCTCAGACCCCAGGTCACACTCTTTCCTCGTCAGCACAGGAGAACTGGAGCACTaGCCGATGCAGGTAATTGGA +
Preference number: 5 (lower is better)
Translates to: PEQIQTSDPRSHSFLVSTGELEH*PMQVIG
Trigger: TCCAATTACCTGCATCGGCAAGTGCTCCAGTTCTCC...TGTGCTGACGAGGAAAGAGTGTGACCTGGGGTCTGAGGTTTGAATCTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ACGGCAACACGGAGAGTGCTCAGAACTGCGCGAGCAGCCAAGACTTCATTTTGCAAAGCCTCCTCTGGTTaGATGGGCTGCTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: TATRRVLRTARAAKTSFCKASSG*MGCLLE
Trigger: TTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTT...GCAAAATGAAGTCTTGGCTGCTCGCGCAGTTCTGAGCACTCTCCGTGTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp AGACCCCAGGCCTCAGAGGCAGATTCAAAGGGGGCTTGTAGTGTGTaGATTCCGCAGTGGACTCAATCAGGATATCATAGGTGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: RPQASEADSKGACSV*IPQWTQSGYHRWLQ
Trigger: TTGCAGCCACCTATGATATCCTGATTGAGTCCACTGCGGAATTCACACACTACAAGCCCCCTTTGAATCTGCCTCTGAGGCCTGGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp CACTGCGAGGTGGCCCATTGTGCAGCTTCAAAGCCTCCTCTGGTTTaGTGGGCTGCTTGTTGGAAAAGGTCAAAGGTGCCACAAGGAATT +
Preference number: 5 (lower is better)
Translates to: HCEVAHCAASKPPLV*WAACWKRSKVPQGI
Trigger: AATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCTGCACAATGGGCCACCTCGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp TGTACTCCACAGCATCCTCATCCCACTGGACATTCTTGTTGGCTTTaGCTTCTAGGGGACAGAATCGAGCCACCTTCTCTGGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: CTPQHPHPTGHSCWL*LLGDRIEPPSLASA
Trigger: TGCTGATGCCAGAGAAGGTGGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGTGGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp CTGCTTGTTGGAAAAGGTCAAAGGTGCCACAAGGAATTTGGTCTCTaGCACTGGCACCCAGTGATGGAGAATCTTCACTGTCCAGACCCC +
Preference number: 5 (lower is better)
Translates to: LLVGKGQRCHKEFGL*HWHPVMENLHCPDP
Trigger: GGGGTCTGGACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ACAGGAAAGAGGCAGATATGGGCGGTAACACAGTTGTCTGCGAGAACGGGACTGTTGATGGGCTGCTTGTaGGAAAAGGTCAAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: TGKRQIWAVTQLSARTGLLMGCL*EKVKGA
Trigger: GGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAA...CAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCATATCTGCCTCTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 90 bp CCAGTGTCTCCAGTTTGCTCACAGCAAGGTTGGTCACGTGATGCTTaGTCAGAAAGCCCTGGAATCGGTCAGCAAGGAAGTAGAGATGGA +
Preference number: 5 (lower is better)
Translates to: PVSPVCSQQGWSRDA*SESPGIGQQGSRDG
Trigger: TCCATCTCTACTTCCTTGCTGACCGATTCCAGGGCTTTCTGATCAAGCATCACGTGACCAACCTTGCTGTGAGCAAACTGGAGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp GGGTCCTGGGGGCGAAGTTGCTGTTATCCACATTCTCAAAGTCCTTaGGGACTGAGTTCTCATTGTTGCTGTCGGTCCGAACTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GSWGRSCCYPHSQSP*GLSSHCCCRSELSL
Trigger: AAGAGAAAGTTCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGATAACAGCAACTTCGCCCCCAGGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCTCGACTTGGGCAGGATaGATGTGCAGGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFSTWAG*MCRLRT
Trigger: AGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGA...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CCCATTCCTCCTCCTAAGATCAATCATTCTTGGAAGGAGCCTGTCTTCCTCTGCTCCCACTGGACATTCTaGTTGGCTTTGCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PIPPPKINHSWKEPVFLCSHWTF*LALPSR
Trigger: CCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGA...GCAGAGGAAGACAGGCTCCTTCCAAGAATGATTGATCTTAGGAGGAGGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp GTGGGCACCCTGGCGAGGAAGGATATGAAATTAAGGACCCAATCTGAAATGTTTACAGTCACGGTCACATaGGGCCCCTTTCCCCATTTC +
Preference number: 5 (lower is better)
Translates to: VGTLARKDMKLRTQSEMFTVTVT*GPFPHF
Trigger: GAAATGGGGAAAGGGGCCCAATGTGACCGTGACTGT...AAACATTTCAGATTGGGTCCTTAATTTCATATCCTTCCTCGCCAGGGTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp GTGTGTGAATTCCGCAGTGGACTCAATCAGGATATCATAGGTGGCTaGAATGACGTTGACAGGATCCACCCAAATAACAGTCACGGTCAC +
Preference number: 5 (lower is better)
Translates to: VCEFRSGLNQDIIGG*NDVDRIHPNNSHGH
Trigger: GTGACCGTGACTGTTATTTGGGTGGATCCTGTCAACGTCATTGCAGCCACCTATGATATCCTGATTGAGTCCACTGCGGAATTCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CACTCCCTTTTGTCTTTCACCTGTGGTTTTACCCATCTATGCTTGTGTCCCGGAGTGGCTGCAATGACGTaGACAGGATCCACCCAAATA +
Preference number: 5 (lower is better)
Translates to: HSLLSFTCGFTHLCLCPGVAAMT*TGSTQI
Trigger: TATTTGGGTGGATCCTGTCAACGTCATTGCAGCCAC...TCCGGGACACAAGCATAGATGGGTAAAACCACAGGTGAAAGACAAAAGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp GGTATTGAGAGAATGGGGCACTGGGCTCACAGTTCCCATGGGTTAGTAAAAGCAGGTTTGATGGGCTGCTaGTTGGAAAAGGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GIERMGHWAHSSHGLVKAGLMGC*LEKVKG
Trigger: ACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACC...TGCTTTTACTAACCCATGGGAACTGTGAGCCCAGTGCCCCATTCTCTCAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 90 bp TGTTATCCACATTCTCAAAGTCCTTGGGGACTGAGTTCTCATTGTTaGTGTCGGTCCGAACTTTCTCTTTGGGACGGTGAGAGAAGTAGC +
Preference number: 5 (lower is better)
Translates to: CYPHSQSPWGLSSHC*CRSELSLWDGERSS
Trigger: GCTACTTCTCTCACCGTCCCAAAGAGAAAGTTCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp AGGACTCAGCAGGGAGAAGGGTGTAAGAGTAGAACTGCTTCATCTTaGTCACCAGGTCATCTGTGGAGAATGCCACATACTCTACAAACT +
Preference number: 5 (lower is better)
Translates to: RTQQGEGCKSRTASS*SPGHLWRMPHTLQT
Trigger: AGTTTGTAGAGTATGTGGCATTCTCCACAGATGACCTGGTGACCAAGATGAAGCAGTTCTACTCTTACACCCTTCTCCCTGCTGAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp GATAAAGACAATTATGCCCAATACCAGCGAACTTCCTATGAAAACCCTGGGGTTGAGGTGACTCGGACATaGTCGTACTGCCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: DKDNYAQYQRTSYENPGVEVTRT*SYCLEN
Trigger: GTTCTCCAGGCAGTACGACAATGTCCGAGTCACCTC...AACCCCAGGGTTTTCATAGGAAGTTCGCTGGTATTGGGCATAATTGTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTGCACCCAGCTCTGACTaGGGATCAGGGCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIAPSSD*GSGLKE
Trigger: TTCCTTCAGCCCTGATCCCAAGTCAGAGCTGGGTGC...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 90 bp GGGTGTAAGAGTAGAACTGCTTCATCTTGGTCACCAGGTCATCTGTaGAGAATGCCACATACTCTACAAACTTCCTGTTTAGCAGGAACC +
Preference number: 5 (lower is better)
Translates to: GCKSRTASSWSPGHL*RMPHTLQTSCLAGT
Trigger: GGTTCCTGCTAAACAGGAAGTTTGTAGAGTATGTGGCATTCTCCACAGATGACCTGGTGACCAAGATGAAGCAGTTCTACTCTTACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp ATGGTTCTGTGTTTTCAAAACTCTTGGGCAGCCACCTCCCAAGGCTGTTGTTTCACATTCTCAAAGTCCTaGGGGACTGAGTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: MVLCFQNSWAATSQGCCFTFSKS*GTEFSL
Trigger: CAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGT...GAAACAACAGCCTTGGGAGGTGGCTGCCCAAGAGTTTTGAAAACACAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp CATGAACTCGGTGGTAAATGGTTTCTTCTTCATACTCTACACTTTGTGGCCATTTTCCCTTGGCTACTGTaGCCTGTGGCTTTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: HELGGKWFLLHTLHFVAIFPWLL*PVAFSR
Trigger: TCGGGAGAAAGCCACAGGCAACAGTAGCCAAGGGAA...AATGGCCACAAAGTGTAGAGTATGAAGAAGAAACCATTTACCACCGAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp TCTTGGGAGAGAGGTTACAGTTTCAATGAACATCCTCTTATCTATCGGAAAACTGCTGAGATGGCCTCCTaGCCAGAGATATCACACTTG +
Preference number: 5 (lower is better)
Translates to: SWERGYSFNEHPLIYRKTAEMAS*PEISHL
Trigger: CAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGC...AGTTTTCCGATAGATAAGAGGATGTTCATTGAAACTGTAACCTCTCTCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS-3UTR CAA 90 bp TCTTGGGAGAGAGGTTACAGTTTCAATGAACATCCTCTTATCTATCGGAAAACTTCCAGTGTCTCCAGTTaGCTCACAGCAAGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SWERGYSFNEHPLIYRKTSSVSS*LTARLV
Trigger: GACCAACCTTGCTGTGAGCAAACTGGAGACACTGGA...AGTTTTCCGATAGATAAGAGGATGTTCATTGAAACTGTAACCTCTCTCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp CTGGGCAGGCGGTGGGGCCTGTGGTGCAGATGTCCATaGCAGTCCAAGTCCCACCCACCAGCGAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: LGRRWGLWCRCP*QSKSHPPASPA
Trigger: GGCTGGACTCGCTGGTGGGTGGGACTTGGACTGCCATGGACATCTGCACCACAGGCCCCACCGCCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp GAGTCCAGGCTGCTGAAATTCCACACCACCAGCGTCTaGAGCAGCAGCACCATGAGCGCCGCCAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: ESRLLKFHTTSV*SSSTMSAASSA
Trigger: GGCGCTGCTGGCGGCGCTCATGGTGCTGCTGCTGCAGACGCTGGTGGTGTGGAATTTCAGCAGCCTGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp TGGCTACTGTTGCCTGTGGCTTTCTCCCGAGGAGGCAGCACCTCCTaGGGGCCTTTCCCCAGGACTGACTGGCCCTGTCGTTTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WLLLPVAFSRGGSTS*GPFPRTDWPCRLSW
Trigger: CCAGGACAAACGACAGGGCCAGTCAGTCCTGGGGAAAGGCCCCAAGGAGGTGCTGCCTCCTCGGGAGAAAGCCACAGGCAACAGTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp GCGCGGGTCAGTGCTGAGATGGCCTCCTTGCCAGAGATATCACACTaGGGGGCCTGGTCAGACTTGGTTTCGGGGGACCCACCACCACCA +
Preference number: 6 (lower is better)
Translates to: ARVSAEMASLPEISH*GAWSDLVSGDPPPP
Trigger: TGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACTGACCCGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp CGTAGACATTCTCCCAGTAGGAGCGGAGGCCCGGGGTaGCCGCAGGATAGTTCCCGTACAGGTAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: RRHSPSRSGGPG*PQDSSRTGKSP
Trigger: TGGACTCTTACCTGTACGGGAACTATCCTGCGGGCACCCCGGGCCTCCGCTCCTACTGGGAGAATGTCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp ATGGCCTCCTTGCCAGAGATATCACACTTGGGGGCCTGGTCAGACTaGGTTTCGGGGGACCCACCACCACCACTCTTCCTGGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: MASLPEISHLGAWSD*VSGDPPPPLFLAWL
Trigger: CAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp GACGGTGAGAGAAGTAGCCATCCTGGGTCTCTAGGGTaGTCAGTGGACTTGGTTGTGGATCCCTCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: DGERSSHPGSLG*SVDLVVDPSPG
Trigger: CCCGGGCGAGGGATCCACAACCAAGTCCACTGATCACCCTAGAGACCCAGGATGGCTACTTCTCTCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp CCTGAGCCGTCCGTCAGGTTTGACTGCACCCAGCTCTaGCTTGGGATCAGGGCTGAAGGAACTCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: PEPSVRFDCTQL*LGIRAEGTPGC
Trigger: ACAGCCTGGAGTTCCTTCAGCCCTGATCCCAAGTCAGAGCTGGGTGCAGTCAAACCTGACGGACGGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GTCTTGAGAGATCCTTCCCTTGGCTACTGTTGCCTGTaGCTTTCTCCCGAGGAGGCAGCACCTCCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: VLRDPSLGYCCL*LSPEEAAPPWG
Trigger: GCCCCAAGGAGGTGCTGCCTCCTCGGGAGAAAGCCACAGGCAACAGTAGCCAAGGGAAGGATCTCTCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp TGCCAGAGATATCACACTTGGGGGCCTGGTCAGACTTaGTTTCGGGGGACCCACCACCACCACTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: CQRYHTWGPGQT*FRGTHHHHSSW
Trigger: CCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp ATGGCCTCCTTGCCAGAGATATCACACTTGGGGGCCTaGTCAGACTTGGTTTCGGGGGACCCACCACCACCA +
Preference number: 6 (lower is better)
Translates to: MASLPEISHLGA*SDLVSGDPPPP
Trigger: TGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp CCGGTGAAGGCTGCATTCTTCCGGGCCTGTTCGACTTaGGCAGGATTGATGTGCAGGCTGAGGACTGGGTTC +
Preference number: 6 (lower is better)
Translates to: PVKAAFFRACST*AGLMCRLRTGF
Trigger: GAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp GCTGCATTCTTCCGGGCCTGTTCGACTTGGGCAGGATaGATGTGCAGGCTGAGGACTGGGTTCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: AAFFRACSTWAG*MCRLRTGFRLW
Trigger: CCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp CCCGGTGAAGGCTGCATTCTTCCGGGCCTGTTCGACTaGGGCAGGATTGATGTGCAGGCTGAGGACTGGGTT +
Preference number: 6 (lower is better)
Translates to: PGEGCILPGLFD*GRIDVQAEDWV
Trigger: AACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp CCGGTGAAGGCTGCATTCTTCCGGGCCTGTTCGACTTGGGCAGGATaGATGTGCAGGCTGAGGACTGGGTTCAGGCTCTGGAAACTCTGC +
Preference number: 6 (lower is better)
Translates to: PVKAAFFRACSTWAG*MCRLRTGFRLWKLC
Trigger: GCAGAGTTTCCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp GAGGCACGGCCATGGACCACCAGGACAAAGGCGATTCTGACTGGGTaGGCAGGCATGTACTCCACAGCATCCTCATCCCACTGGACATTC +
Preference number: 6 (lower is better)
Translates to: EARPWTTRTKAILTG*AGMYSTASSSHWTF
Trigger: GAATGTCCAGTGGGATGAGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp CCCACCACCACCACTCTTCCTGGCATGGCTGTGTCTTaGGAGATCCTTCCCTTGGCTACTGTTGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PTTTTLPGMAVS*EILPLATVACG
Trigger: GCCACAGGCAACAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp AGGCACGGCCATGGACCACCAGGACAAAGGCGATTCTaGCTGGGTTGGCAGGCATGTACTCCACAGCATCCT +
Preference number: 6 (lower is better)
Translates to: RHGHGPPGQRRF*LGWQACTPQHP
Trigger: AGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp TGGCTCCACCCCAAATGGTGGCCATCCTCCAGGAGGTaGCTCGGACATTGTCGTACTGCCTGGAGAACTGGA +
Preference number: 6 (lower is better)
Translates to: WLHPKWWPSSRR*LGHCRTAWRTG
Trigger: TCCAGTTCTCCAGGCAGTACGACAATGTCCGAGTCACCTCCTGGAGGATGGCCACCATTTGGGGTGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GTTTCGGGGGACCCACCACCACCACTCTTCCTGGCATaGCTGTGTCTTGAGAGATCCTTCCCTTGGCTACTG +
Preference number: 6 (lower is better)
Translates to: VSGDPPPPLFLA*LCLERSFPWLL
Trigger: CAGTAGCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp ACTTGGTTTCGGGGGACCCACCACCACCACTCTTCCTaGCATGGCTGTGTCTTGAGAGATCCTTCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: TWFRGTHHHHSS*HGCVLRDPSLG
Trigger: GCCAAGGGAAGGATCTCTCAAGACACAGCCATGCCAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TTGCCAGAGATATCACACTTGGGGGCCTGGTCAGACTaGGTTTCGGGGGACCCACCACCACCACTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LPEISHLGAWSD*VSGDPPPPLFL
Trigger: CAGGAAGAGTGGTGGTGGTGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp AGTGCTGAGATGGCCTCCTTGCCAGAGATATCACACTaGGGGGCCTGGTCAGACTTGGTTTCGGGGGACCCA +
Preference number: 6 (lower is better)
Translates to: SAEMASLPEISH*GAWSDLVSGDP
Trigger: TGGGTCCCCCGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp CGACAATGCTTGGACTTAGCGCGGGTCAGTGCTGAGATGGCCTCCTaGCCAGAGATATCACACTTGGGGGCCTGGTCAGACTTGGTTTCG +
Preference number: 6 (lower is better)
Translates to: RQCLDLARVSAEMAS*PEISHLGAWSDLVS
Trigger: CGAAACCAAGTCTGACCAGGCCCCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACTGACCCGCGCTAAGTCCAAGCATTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp CTGGCGACAATGCTTGGACTTAGCGCGGGTCAGTGCTaGGATGGCCTCCTTGCCAGAGATATCACACTTGGG +
Preference number: 6 (lower is better)
Translates to: LATMLGLSAGQC*DGLLARDITLG
Trigger: CCCAAGTGTGATATCTCTGGCAAGGAGGCCATCTCAGCACTGACCCGCGCTAAGTCCAAGCATTGTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp CATCAGCAGCCCCAGCTTGTGGCGACAGTAGGTTTCTaGAATCTCCTGGCGACAATGCTTGGACTTAGCGCG +
Preference number: 6 (lower is better)
Translates to: HQQPQLVATVGF*NLLATMLGLSA
Trigger: CGCGCTAAGTCCAAGCATTGTCGCCAGGAGATTGCAGAAACCTACTGTCGCCACAAGCTGGGGCTGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp TTCTTCCGGGCCTGTTCGACTTGGGCAGGATTGATGTaGAGGCTGAGGACTGGGTTCAGGCTCTGGAAACTC +
Preference number: 6 (lower is better)
Translates to: FFRACSTWAGLM*RLRTGFRLWKL
Trigger: GAGTTTCCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCAATCCTGCCCAAGTCGAACAGGCCCGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp ACGGCCATGGACCACCAGGACAAAGGCGATTCTGACTaGGTTGGCAGGCATGTACTCCACAGCATCCTCATC +
Preference number: 6 (lower is better)
Translates to: TAMDHQDKGDSD*VGRHVLHSILI
Trigger: GATGAGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp TTGAACATGCGCTGTAGCTGTCGAGAGGCACGGCCATaGACCACCAGGACAAAGGCGATTCTGACTGGGTTG +
Preference number: 6 (lower is better)
Translates to: LNMRCSCREARP*TTRTKAILTGL
Trigger: CAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGGCCGTGCCTCTCGACAGCTACAGCGCATGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GGTGAGGGCTACATCGCTGAGGGTGTGGATGCCATCTaGTTCATCGTAGACATTCTCCCAGTAGGAGCGGAG +
Preference number: 6 (lower is better)
Translates to: GEGYIAEGVDAI*FIVDILPVGAE
Trigger: CTCCGCTCCTACTGGGAGAATGTCTACGATGAACCAGATGGCATCCACACCCTCAGCGATGTAGCCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GACTCAGCTCTTCGAAGACCCAGACGGATGAAGGAATaGTACAGGGTGAGGGCTACATCGCTGAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: DSALRRPRRMKE*YRVRATSLRVW
Trigger: CCACACCCTCAGCGATGTAGCCCTCACCCTGTACCATTCCTTCATCCGTCTGGGTCTTCGAAGAGCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TTGGGGCCTTTCCCCAGGACTGACTGGCCCTGTCGTTaGTCCTGGGCATCCAGCTTTCTCTGCAAATGCTCT +
Preference number: 6 (lower is better)
Translates to: LGPFPRTDWPCR*SWASSFLCKCS
Trigger: AGAGCATTTGCAGAGAAAGCTGGATGCCCAGGACAAACGACAGGGCCAGTCAGTCCTGGGGAAAGGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp CCATGGACCACCAGGACAAAGGCGATTCTGACTGGGTaGGCAGGCATGTACTCCACAGCATCCTCATCCCAC +
Preference number: 6 (lower is better)
Translates to: PWTTRTKAILTG*AGMYSTASSSH
Trigger: GTGGGATGAGGATGCTGTGGAGTACATGCCTGCCAACCCAGTCAGAATCGCCTTTGTCCTGGTGGTCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp CAAATGGTGGCCATCCTCCAGGAGGTGACTCGGACATaGTCGTACTGCCTGGAGAACTGGAGCACTTGCCGA +
Preference number: 6 (lower is better)
Translates to: QMVAILQEVTRT*SYCLENWSTCR
Trigger: TCGGCAAGTGCTCCAGTTCTCCAGGCAGTACGACAATGTCCGAGTCACCTCCTGGAGGATGGCCACCATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp CCTTTCCCCAGGACTGACTGGCCCTGTCGTTTGTCCTaGGCATCCAGCTTTCTCTGCAAATGCTCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PFPRTDWPCRLS*ASSFLCKCSFC
Trigger: GCAGAAAGAGCATTTGCAGAGAAAGCTGGATGCCCAGGACAAACGACAGGGCCAGTCAGTCCTGGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp GCTGGTGTTTCTGCTTCTGGGTCCTGGGGGCGAAGTTaGTGTTATCCACATTCTCAAAGTCCTTGGGGACTG +
Preference number: 6 (lower is better)
Translates to: AGVSASGSWGRS*CYPHSQSPWGL
Trigger: CAGTCCCCAAGGACTTTGAGAATGTGGATAACAGCAACTTCGCCCCCAGGACCCAGAAGCAGAAACACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp GCACTGCGAGGTGGCCCATTGTGCAGCTTCAAAGCCTCCTCTGGTTaGATGGGCTGCTTGTTGGAAAAGGTCAAAGGTGCCACAAGGAAT +
Preference number: 6 (lower is better)
Translates to: ALRGGPLCSFKASSG*MGCLLEKVKGATRN
Trigger: ATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCTGCACAATGGGCCACCTCGCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp GTGGCCCATTGTGCAGCTTCAAAGCCTCCTCTGGTTTaGTGGGCTGCTTGTTGGAAAAGGTCAAAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: VAHCAASKPPLV*WAACWKRSKVP
Trigger: TGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCTGCACAATGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp ACTCCACAGCATCCTCATCCCACTGGACATTCTTGTTaGCTTTGCCTTCTAGGGGACAGAATCGAGCCACCT +
Preference number: 6 (lower is better)
Translates to: TPQHPHPTGHSC*LCLLGDRIEPP
Trigger: AGGTGGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GGTCAAAGGTGCCACAAGGAATTTGGTCTCTGCCACTaGCACCCAGTGATGGAGAATCTTCACTGTCCAGAC +
Preference number: 6 (lower is better)
Translates to: GQRCHKEFGLCH*HPVMENLHCPD
Trigger: GTCTGGACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TACTCCACAGCATCCTCATCCCACTGGACATTCTTGTaGGCTTTGCCTTCTAGGGGACAGAATCGAGCCACC +
Preference number: 6 (lower is better)
Translates to: YSTASSSHWTFL*ALPSRGQNRAT
Trigger: GGTGGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGTGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp ATGTACTCCACAGCATCCTCATCCCACTGGACATTCTTGTTGGCTTaGCCTTCTAGGGGACAGAATCGAGCCACCTTCTCTGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: MYSTASSSHWTFLLA*PSRGQNRATFSGIS
Trigger: GCTGATGCCAGAGAAGGTGGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGTGGAGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp TGGGTCCTGGGGGCGAAGTTGCTGTTATCCACATTCTCAAAGTCCTaGGGGACTGAGTTCTCATTGTTGCTGTCGGTCCGAACTTTCTCT +
Preference number: 6 (lower is better)
Translates to: WVLGAKLLLSTFSKS*GTEFSLLLSVRTFS
Trigger: AGAGAAAGTTCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGATAACAGCAACTTCGCCCCCAGGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp GATAGTTCCCGTACAGGTAAGAGTCCAGCTGCCCAATaGTCTCCTGGTTCACTATGGCTTCGAACTTTCGGG +
Preference number: 6 (lower is better)
Translates to: DSSRTGKSPAAQ*SPGSLWLRTFG
Trigger: CCCGAAAGTTCGAAGCCATAGTGAACCAGGAGATCATTGGGCAGCTGGACTCTTACCTGTACGGGAACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp CCAGTTTGCTCACAGCAAGGTTGGTCACGTGATGCTTaGTCAGAAAGCCCTGGAATCGGTCAGCAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: PVCSQQGWSRDA*SESPGIGQQGS
Trigger: ACTTCCTTGCTGACCGATTCCAGGGCTTTCTGATCAAGCATCACGTGACCAACCTTGCTGTGAGCAAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp AGTGTCTCCAGTTTGCTCACAGCAAGGTTGGTCACGTaGTGCTTGATCAGAAAGCCCTGGAATCGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SVSSLLTARLVT*CLIRKPWNRSA
Trigger: TGCTGACCGATTCCAGGGCTTTCTGATCAAGCATCACGTGACCAACCTTGCTGTGAGCAAACTGGAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp TGGTTTGATGGGCTGCTTGTTGGAAAAGGTCAAAGGTaGCACAAGGAATTTGGTCTCTGCCACTGGCACCCA +
Preference number: 6 (lower is better)
Translates to: WFDGLLVGKGQR*HKEFGLCHWHP
Trigger: TGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp GGGGCGAAGTTGCTGTTATCCACATTCTCAAAGTCCTaGGGGACTGAGTTCTCATTGTTGCTGTCGGTCCGA +
Preference number: 6 (lower is better)
Translates to: GAKLLLSTFSKS*GTEFSLLLSVR
Trigger: TCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGATAACAGCAACTTCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp ACAGCATCCTCATCCCACTGGACATTCTTGTTGGCTTaGCCTTCTAGGGGACAGAATCGAGCCACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TASSSHWTFLLA*PSRGQNRATFS
Trigger: AGAGAAGGTGGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp ATGTACTCCACAGCATCCTCATCCCACTGGACATTCTaGTTGGCTTTGCCTTCTAGGGGACAGAATCGAGCC +
Preference number: 6 (lower is better)
Translates to: MYSTASSSHWTF*LALPSRGQNRA
Trigger: GGCTCGATTCTGTCCCCTAGAAGGCAAAGCCAACAAGAATGTCCAGTGGGATGAGGATGCTGTGGAGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TCGGACATTGTCGTACTGCCTGGAGAACTGGAGCACTaGCCGATGCAGGTAATTGGAACGCTTATCCACATG +
Preference number: 6 (lower is better)
Translates to: SDIVVLPGELEH*PMQVIGTLIHM
Trigger: CATGTGGATAAGCGTTCCAATTACCTGCATCGGCAAGTGCTCCAGTTCTCCAGGCAGTACGACAATGTCCGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 90 bp GGAGGTGACTCGGACATTGTCGTACTGCCTGGAGAACTGGAGCACTaGCCGATGCAGGTAATTGGAACGCTTATCCACATGGATATAGTA +
Preference number: 6 (lower is better)
Translates to: GGDSDIVVLPGELEH*PMQVIGTLIHMDIV
Trigger: TACTATATCCATGTGGATAAGCGTTCCAATTACCTGCATCGGCAAGTGCTCCAGTTCTCCAGGCAGTACGACAATGTCCGAGTCACCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp GGATATAGTAGAAATGGTCTTTGTGGTAGATGGCCTTaGACATGCGCTGTAGCTGTCGAGAGGCACGGCCAT +
Preference number: 6 (lower is better)
Translates to: GYSRNGLCGRWP*TCAVAVERHGH
Trigger: ATGGCCGTGCCTCTCGACAGCTACAGCGCATGTTCAAGGCCATCTACCACAAAGACCATTTCTACTATATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS TCA 72 bp GCCTCAGAGGCAGATTCAAAGGGGGCTTGTAGTGTGTaGATTCCGCAGTGGACTCAATCAGGATATCATAGG +
Preference number: 6 (lower is better)
Translates to: ASEADSKGACSV*IPQWTQSGYHR
Trigger: CCTATGATATCCTGATTGAGTCCACTGCGGAATTCACACACTACAAGCCCCCTTTGAATCTGCCTCTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp CATTCTCAAAGTCCTTGGGGACTGAGTTCTCATTGTTaGTGTCGGTCCGAACTTTCTCTTTGGGACGGTGAG +
Preference number: 6 (lower is better)
Translates to: HSQSPWGLSSHC*CRSELSLWDGE
Trigger: CTCACCGTCCCAAAGAGAAAGTTCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp GGAAAAGGTCAAAGGTGCCACAAGGAATTTGGTCTCTaGCACTGGCACCCAGTGATGGAGAATCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: GKGQRCHKEFGL*HWHPVMENLHC
Trigger: ACAGTGAAGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp AGTTCTCATTGTTGCTGTCGGTCCGAACTTTCTCTTTaGGACGGTGAGAGAAGTAGCCATCCTGGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: SSHCCCRSELSL*DGERSSHPGSL
Trigger: TAGAGACCCAGGATGGCTACTTCTCTCACCGTCCCAAAGAGAAAGTTCGGACCGACAGCAACAATGAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GCTTGTTGGAAAAGGTCAAAGGTGCCACAAGGAATTTaGTCTCTGCCACTGGCACCCAGTGATGGAGAATCT +
Preference number: 6 (lower is better)
Translates to: ACWKRSKVPQGI*SLPLAPSDGES
Trigger: AGATTCTCCATCACTGGGTGCCAGTGGCAGAGACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TCCACATTCTCAAAGTCCTTGGGGACTGAGTTCTCATaGTTGCTGTCGGTCCGAACTTTCTCTTTGGGACGG +
Preference number: 6 (lower is better)
Translates to: STFSKSLGTEFS*LLSVRTFSLGR
Trigger: CCGTCCCAAAGAGAAAGTTCGGACCGACAGCAACAATGAGAACTCAGTCCCCAAGGACTTTGAGAATGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp TTGTGCAGCTTCAAAGCCTCCTCTGGTTTGATGGGCTaGTTGTTGGAAAAGGTCAAAGGTGCCACAAGGAAT +
Preference number: 6 (lower is better)
Translates to: LCSFKASSGLMG*LLEKVKGATRN
Trigger: ATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp CAGGGAGAAGGGTGTAAGAGTAGAACTGCTTCATCTTaGTCACCAGGTCATCTGTGGAGAATGCCACATACT +
Preference number: 6 (lower is better)
Translates to: QGEGCKSRTASS*SPGHLWRMPHT
Trigger: AGTATGTGGCATTCTCCACAGATGACCTGGTGACCAAGATGAAGCAGTTCTACTCTTACACCCTTCTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp AGCTTCAAAGCCTCCTCTGGTTTGATGGGCTGCTTGTaGGAAAAGGTCAAAGGTGCCACAAGGAATTTGGTC +
Preference number: 6 (lower is better)
Translates to: SFKASSGLMGCL*EKVKGATRNLV
Trigger: GACCAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CAA 72 bp TGCAGCTTCAAAGCCTCCTCTGGTTTGATGGGCTGCTaGTTGGAAAAGGTCAAAGGTGCCACAAGGAATTTG +
Preference number: 6 (lower is better)
Translates to: CSFKASSGLMGC*LEKVKGATRNL
Trigger: CAAATTCCTTGTGGCACCTTTGACCTTTTCCAACAAGCAGCCCATCAAACCAGAGGAGGCTTTGAAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS GCA 72 bp TTCCGCAGTGGACTCAATCAGGATATCATAGGTGGCTaGAATGACGTTGACAGGATCCACCCAAATAACAGT +
Preference number: 6 (lower is better)
Translates to: FRSGLNQDIIGG*NDVDRIHPNNS
Trigger: ACTGTTATTTGGGTGGATCCTGTCAACGTCATTGCAGCCACCTATGATATCCTGATTGAGTCCACTGCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp GCCTGGAGAACTGGAGCACTTGCCGATGCAGGTAATTaGAACGCTTATCCACATGGATATAGTAGAAATGGT +
Preference number: 6 (lower is better)
Translates to: AWRTGALADAGN*NAYPHGYSRNG
Trigger: ACCATTTCTACTATATCCATGTGGATAAGCGTTCCAATTACCTGCATCGGCAAGTGCTCCAGTTCTCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7
CDS CCA 72 bp AGTAGAACTGCTTCATCTTGGTCACCAGGTCATCTGTaGAGAATGCCACATACTCTACAAACTTCCTGTTTA +
Preference number: 6 (lower is better)
Translates to: SRTASSWSPGHL*RMPHTLQTSCL
Trigger: TAAACAGGAAGTTTGTAGAGTATGTGGCATTCTCCACAGATGACCTGGTGACCAAGATGAAGCAGTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032892.7