Pregenerated sensors for XXYLT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047434Ensembl transcript IDs: ENSMUST00000055389.9
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGTTCTGCACCTGGAAGCAAACAGGGCAGTACCTACCACCCACTaGGCCCACGTGCAGGCCTGCCGGTTGGGCCTCTTAGGCCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: IVLHLEANRAVPTTH*AHVQACRLGLLGLL Trigger: CAGAAGGCCTAAGAGGCCCAACCGGCAGGCCTGCACGTGGGCGCAGTGGGTGGTAGGTACTGCCCTGTTTGCTTCCAGGTGCAGAACTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 90 bp | ATCTTCGACCACCTCCTGGAAGACACCCGTGTCAGTCCTTCGGGCTaGCCTGGAGGAAAACAGCTCGAGCAGCAGCAAGGCTCAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: IFDHLLEDTRVSPSG*PGGKQLEQQQGSAK Trigger: CTTAGCTGAGCCTTGCTGCTGCTCGAGCTGTTTTCCTCCAGGGCAGCCCGAAGGACTGACACGGGTGTCTTCCAGGAGGTGGTCGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | GTGAAGGAGTGTGCCACTCACCAGCATGAATGGAACTGGGAGGTCTaGGCTAAGGAGCCAGAGACTTCTGAGCTTGTTCCCGGCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: VKECATHQHEWNWEV*AKEPETSELVPGRG Trigger: TCCCCTGCCGGGAACAAGCTCAGAAGTCTCTGGCTCCTTAGCCCAGACCTCCCAGTTCCATTCATGCTGGTGAGTGGCACACTCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR TCA 90 bp | GGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTaGCTAGGCATTCAGTGCTCACTGGGAGCCACAGTAGCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: GIPLEAQALGCLLKP*LGIQCSLGATVAPT Trigger: GGTGGGTGCTACTGTGGCTCCCAGTGAGCACTGAATGCCTAGTCAGGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | AACAGCTCGAGCAGCAGCAAGGCTCAGCTAAGCTTCTTTGGATATTaGCTGGATAGGAGCCAGCCAGCTGGGAGGTCTGCAGCACCTCAC | + |
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Preference number: 1 (lower is better) Translates to: NSSSSSKAQLSFFGY*LDRSQPAGRSAAPH Trigger: GTGAGGTGCTGCAGACCTCCCAGCTGGCTGGCTCCTATCCAGCCAATATCCAAAGAAGCTTAGCTGAGCCTTGCTGCTGCTCGAGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | GACAAGGGTGCAATTCTCCTTCCTTCCGTATCTTCGACCACCTCCTaGAAGACACCCGTGTCAGTCCTTCGGGCTGCCCTGGAGGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: DKGAILLPSVSSTTS*KTPVSVLRAALEEN Trigger: GTTTTCCTCCAGGGCAGCCCGAAGGACTGACACGGGTGTCTTCCAGGAGGTGGTCGAAGATACGGAAGGAAGGAGAATTGCACCCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | TGTGGGCAGCTGACTCACAAAGCCCGTCTCAAGCACACAGAGAAATaGTACTCACTTCTGGGAAGGGGTAGGGGCTGGCATGACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: CGQLTHKARLKHTEK*YSLLGRGRGWHDTV Trigger: CACTGTGTCATGCCAGCCCCTACCCCTTCCCAGAAGTGAGTACCATTTCTCTGTGTGCTTGAGACGGGCTTTGTGAGTCAGCTGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR TCA 90 bp | GAAGACGATGCCTGGCGCACGCAGGCATCTAATAACCAGACACTATaGATAGGAAATCAAGTAGCAAGGAGAACAGAGGAACTGGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: EDDAWRTQASNNQTL*IGNQVARRTEELGP Trigger: CGGGCCCAGTTCCTCTGTTCTCCTTGCTACTTGATTTCCTATTCATAGTGTCTGGTTATTAGATGCCTGCGTGCGCCAGGCATCGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | TCAGGTCACCTGGAGCAGGTAGACAGACAAGAGAAGGTGGGGTTCTaGGATAGAGGAGGGATAAGAGCTCTGGACACTATAGTAAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: SGHLEQVDRQEKVGF*DRGGIRALDTIVRV Trigger: AACCCTTACTATAGTGTCCAGAGCTCTTATCCCTCCTCTATCCCAGAACCCCACCTTCTCTTGTCTGTCTACCTGCTCCAGGTGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 90 bp | CAAAGCCAGTTCTTTACAAGGGTTTTGATTCCGTGTGGACAAGGGTaGAATTCTCCTTCCTTCCGTATCTTCGACCACCTCCTGGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: QSQFFTRVLIPCGQG*NSPSFRIFDHLLED Trigger: GTCTTCCAGGAGGTGGTCGAAGATACGGAAGGAAGGAGAATTGCACCCTTGTCCACACGGAATCAAAACCCTTGTAAAGAACTGGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | TTCTGCTTGATGCTGATCCTACTGCCCATCCAGAGCCCTGAACACTaGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: FCLMLILLPIQSPEH*PENKHRDSRVLKVY Trigger: ATAGACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCTCTGGATGGGCAGTAGGATCAGCATCAAGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 90 bp | AGGGCATCGGATCCCATTACAGATGGTTGTGAACCACTATGTAGTTaGTGGGAATTGAACTCAGGACCTCTAAAAGAGCAGTCAGTATTC | + |
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Preference number: 1 (lower is better) Translates to: RASDPITDGCEPLCS*WELNSGPLKEQSVF Trigger: GAATACTGACTGCTCTTTTAGAGGTCCTGAGTTCAATTCCCAGCAACTACATAGTGGTTCACAACCATCTGTAATGGGATCCGATGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 90 bp | GCATCGGATCCCATTACAGATGGTTGTGAACCACTATGTAGTTGCTaGGAATTGAACTCAGGACCTCTAAAAGAGCAGTCAGTATTCATA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPLCSC*ELNSGPLKEQSVFI Trigger: TATGAATACTGACTGCTCTTTTAGAGGTCCTGAGTTCAATTCCCAGCAACTACATAGTGGTTCACAACCATCTGTAATGGGATCCGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCGTCAGTCCTTCGGGCTaGCCTGGAGGAAAACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: WDCGIPLEAQALGCLLKPVSPSG*PGGKQL Trigger: GAGCTGTTTTCCTCCAGGGCAGCCCGAAGGACTGAC...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCTCTTCGACCACCTCCTaGAAGACACCCGTGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VGLWHSFGGSSPGLLVKTSSTTS*KTPVSV Trigger: GACTGACACGGGTGTCTTCCAGGAGGTGGTCGAAGA...GGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTACCGTGTGGACAAGGGTaGAATTCTCCTTCCTTCCGT | + |
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Preference number: 2 (lower is better) Translates to: RMWDCGIPLEAQALGCLLPCGQG*NSPSFR Trigger: ACGGAAGGAAGGAGAATTGCACCCTTGTCCACACGG...TAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCACATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTATTCATCAGGCCAGCTGGGAGGTCTaGAGCACCTCACCCCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: TGQRTNTVTQEFSKSIHQASWEV*STSPLK Trigger: CTTTAGGGGTGAGGTGCTGCAGACCTCCCAGCTGGC...CTGATGAATAGACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGAACACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCACAGACAAGAGAAGGTaGGGTTCTGGGATAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SPEHWPENKHRDSRVLKVTDKRR*GSGIEE Trigger: CTCCTCTATCCCAGAACCCCACCTTCTCTTGTCTGT...GACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAACCACTATGTAGTTGCTGGGAATaGAACTCAGGACCTCTAAAAGAGCAGTCAGTATTCATAACCGTC | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPLCSCWE*NSGPLKEQSVFITV Trigger: GACGGTTATGAATACTGACTGCTCTTTTAGAGGTCCTGAGTTCAATTCCCAGCAACTACATAGTGGTTCACAACCATCTGTAATGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | GCAGTACCTACCACCCACTGCGCCCACGTGCAGGCCTaGCGGTTGGGCCTCTTAGGCCTTCTGCTTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: AVPTTHCAHVQA*RLGLLGLLLDA Trigger: AGCATCAAGCAGAAGGCCTAAGAGGCCCAACCGGCAGGCCTGCACGTGGGCGCAGTGGGTGGTAGGTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | CACCTGGAAGCAAACAGGGCAGTACCTACCACCCACTaGGCCCACGTGCAGGCCTGCCGGTTGGGCCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: HLEANRAVPTTH*AHVQACRLGLL Trigger: TAAGAGGCCCAACCGGCAGGCCTGCACGTGGGCGCAGTGGGTGGTAGGTACTGCCCTGTTTGCTTCCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | GCAATTCTCCTTCCTTCCGTATCTTCGACCACCTCCTaGAAGACACCCGTGTCAGTCCTTCGGGCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: AILLPSVSSTTS*KTPVSVLRAAL Trigger: CAGGGCAGCCCGAAGGACTGACACGGGTGTCTTCCAGGAGGTGGTCGAAGATACGGAAGGAAGGAGAATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | AGCAGCAGCAAGGCTCAGCTAAGCTTCTTTGGATATTaGCTGGATAGGAGCCAGCCAGCTGGGAGGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SSSKAQLSFFGY*LDRSQPAGRSA Trigger: TGCAGACCTCCCAGCTGGCTGGCTCCTATCCAGCCAATATCCAAAGAAGCTTAGCTGAGCCTTGCTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | ATCTGGAGGAGGTACAAAGCCTCCTGGGAAAGGATGTaGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: IWRRYKASWERM*DCGIPLEAQAL Trigger: CAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCACATCCTTTCCCAGGAGGCTTTGTACCTCCTCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | CTGACTCACAAAGCCCGTCTCAAGCACACAGAGAAATaGTACTCACTTCTGGGAAGGGGTAGGGGCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LTHKARLKHTEK*YSLLGRGRGWH Trigger: ATGCCAGCCCCTACCCCTTCCCAGAAGTGAGTACCATTTCTCTGTGTGCTTGAGACGGGCTTTGTGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | ATAAGAATCTCCCATTTCTTGCCTGAGGACATGAGCTaGACTGTGCAGACACGGCCTGTGGGGCTTCATGTG | + |
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Preference number: 3 (lower is better) Translates to: IRISHFLPEDMS*TVQTRPVGLHV Trigger: CACATGAAGCCCCACAGGCCGTGTCTGCACAGTCCAGCTCATGTCCTCAGGCAAGAAATGGGAGATTCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | ATGCTGATCCTACTGCCCATCCAGAGCCCTGAACACTaGCCAGAGAACAAACACCGTGACTCAAGAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: MLILLPIQSPEH*PENKHRDSRVL Trigger: GAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCTCTGGATGGGCAGTAGGATCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | AGCAACATGAACATCTGGAGGAGGTACAAAGCCTCCTaGGAAAGGATGTGGGACTGTGGCATTCCTTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SNMNIWRRYKAS*ERMWDCGIPLE Trigger: CTCCAAAGGAATGCCACAGTCCCACATCCTTTCCCAGGAGGCTTTGTACCTCCTCCAGATGTTCATGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CCA 72 bp | GAGAAATGGTACTCACTTCTGGGAAGGGGTAGGGGCTaGCATGACACAGTGGACAATTACGAGTTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: EKWYSLLGRGRG*HDTVDNYEFGF Trigger: AAAACCAAACTCGTAATTGTCCACTGTGTCATGCCAGCCCCTACCCCTTCCCAGAAGTGAGTACCATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR TCA 72 bp | CTGACTATATACAATAAGAATCTCCCATTTCTTGCCTaGGGACATGAGCTGGACTGTGCAGACACGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LTIYNKNLPFLA*GHELDCADTAC Trigger: ACAGGCCGTGTCTGCACAGTCCAGCTCATGTCCTCAGGCAAGAAATGGGAGATTCTTATTGTATATAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | TTCTTTACAAGGGTTTTGATTCCGTGTGGACAAGGGTaGAATTCTCCTTCCTTCCGTATCTTCGACCACCTC | + |
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Preference number: 3 (lower is better) Translates to: FFTRVLIPCGQG*NSPSFRIFDHL Trigger: GAGGTGGTCGAAGATACGGAAGGAAGGAGAATTGCACCCTTGTCCACACGGAATCAAAACCCTTGTAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATAAATGAGGTGCTGCTCTaGAAGCCAGCACCAAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: FSKSIHQLVSVAHGTDYINEVLL*KPAPSN Trigger: GTTGCTTGGTGCTGGCTTCAAGAGCAGCACCTCATT...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAACCACTATGTAGTTaGTGGGAATTGAACTCAGGACCTCTAAAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPITDGCEPLCS*WELNSGPLKEQ Trigger: CTGCTCTTTTAGAGGTCCTGAGTTCAATTCCCAGCAACTACATAGTGGTTCACAACCATCTGTAATGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR TCA 72 bp | TTTGTTAATGTGGCCGAAGCACGGTCTTTGAGGAGCTaGACTAATGAAATACAGACTAGGCTTGTTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: FVNVAEARSLRS*TNEIQTRLVFK Trigger: TTTAAAAACAAGCCTAGTCTGTATTTCATTAGTTCAGCTCCTCAAAGACCGTGCTTCGGCCACATTAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | CCTTCAAATGATTTGCGATATATTCCACCATACGGTTaGAGTATGCATTATTTATCTGCTTCTCTAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: PSNDLRYIPPYG*SMHYLSASLAN Trigger: GTTGGCTAGAGAAGCAGATAAATAATGCATACTGCAACCGTATGGTGGAATATATCGCAAATCATTTGAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR TCA 72 bp | AGTTTTAGAGCTGGAGTGAACTGGATGAGGTTTTCATaGATATTATCTAGGGCACATATAAATCCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SFRAGVNWMRFS*ILSRAHINPED Trigger: GTCTTCAGGATTTATATGTGCCCTAGATAATATTCATGAAAACCTCATCCAGTTCACTCCAGCTCTAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR GCA 72 bp | TATTCCACCATACGGTTGCAGTATGCATTATTTATCTaGTTCTCTAGCCAACATTTTAAGCTGTTTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: YSTIRLQYALFI*FSSQHFKLFPT Trigger: TGTTGGAAACAGCTTAAAATGTTGGCTAGAGAAGCAGATAAATAATGCATACTGCAACCGTATGGTGGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 72 bp | CCTACCACCCACTGCGCCCACGTGCAGGCCTGCCGGTaGGGCCTCTTAGGCCTTCTGCTTGATGCTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: PTTHCAHVQACR*GLLGLLLDADP Trigger: AGGATCAGCATCAAGCAGAAGGCCTAAGAGGCCCAACCGGCAGGCCTGCACGTGGGCGCAGTGGGTGGTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR TCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCGAAGGTCTCCCGGCCTaGGCCCAGGTAGTAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPEGLPA*AQVVEG Trigger: GCCTTCTACTACCTGGGCTCAGGCCGGGAGACCTTC...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | AGGATGTGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTACACCAGGTGCACAGCTaGCGGTTCCAGGTGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RMWDCGIPLEAQALGCLLHQVHS*RFQVQS Trigger: GGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTG...TAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCACATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTCCTGGTCCCCCAGGTaGCCCCGGAAGTGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPSWSPR*PRKWYL Trigger: CAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGA...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCATGGTGAAGAAGTCCTaGTCCCCCAGGTGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPMVKKS*SPRWPR Trigger: CCGGGGCCACCTGGGGGACCAGGACTTCTTCACCAT...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTGCAGCGGCGCGTTGTaGTCCGCCTTGGTGAACATC | + |
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Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPCSGAL*SALVNI Trigger: GATGTTCACCAAGGCGGAGCACAACGCGCCGCTGCA...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | GATTCTTTAGTAGAAGTCAGGTCACCTGGAGCAGGTAGACAGACAAGAGAAGGTCGCCCTCCAGGCTCTTaGCCTTGGCCCCGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: DSLVEVRSPGAGRQTREGRPPGS*PWPRRP Trigger: CGGCCTCCGGGGCCAAGGCCAAGAGCCTGGAGGGCG...ACCTTCTCTTGTCTGTCTACCTGCTCCAGGTGACCTGACTTCTACTAAAGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | AGGATGTGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAGCTGCCGGTTCCAGGTaGAGTCCAGCACATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RMWDCGIPLEAQALGCLLAAGSR*SPAHGR Trigger: TCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGC...TAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCACATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | AGGTACAAAGCCTCCTGGGAAAGGATGTGGGACTGTGGCATTCCTTTGGAGGCTGCGGAGACTGGCGCATaGCCTCCAGGTTCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: RYKASWERMWDCGIPLEAAETGA*PPGSAT Trigger: TGTTGCTGAACCTGGAGGCCATGCGCCAGTCTCCGC...AGCCTCCAAAGGAATGCCACAGTCCCACATCCTTTCCCAGGAGGCTTTGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 72 bp | GCCTCCTGGGAAAGGATGTGGGACTGTGGCATTCCTTaGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCC | + |
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Preference number: 4 (lower is better) Translates to: ASWERMWDCGIP*EAQALGCLLKP Trigger: GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCACATCCTTTCCCAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCCAGCACCAAGCAACATGAACATCTGGAGGAGGTACAAAGCCTCCTGCCTTCAGCCTCTTGGTaGCGCTGGAGAAGGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LEASTKQHEHLEEVQSLLPSASW*RWRRSP Trigger: GGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGG...CAGGAGGCTTTGTACCTCCTCCAGATGTTCATGTTGCTTGGTGCTGGCTTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR TCA 90 bp | AGGTACAAAGCCTCCTGGGAAAGGATGTGGGACTGTGGCATTCCTTTGGAGGCTTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYKASWERMWDCGIPLEACAPPW*TSSAGG Trigger: ACCACCTGCTGATGATGTTCACCAAGGCGGAGCACA...AGCCTCCAAAGGAATGCCACAGTCCCACATCCTTTCCCAGGAGGCTTTGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR TCA 90 bp | CTTGAAGCCAGCACCAAGCAACATGAACATCTGGAGGAGGTACAAAGCCTCCTGTCCCATGGTAGATCTTaGCGTGGCCCTCACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEASTKQHEHLEEVQSLLSHGRS*RGPHSG Trigger: TCCGCTGTGAGGGCCACGTCAAGATCTACCATGGGA...CAGGAGGCTTTGTACCTCCTCCAGATGTTCATGTTGCTTGGTGCTGGCTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTTGGGCATGATCTGGTaGATGGCAACCGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPLGMIW*MATERK Trigger: CTTCCTCTCGGTTGCCATGCACCAGATCATGCCCAA...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | GCTGCCCTGGAGGAAAACAGCTCGAGCAGCAGCAAGGCTCAGCTAAGCTTCTTTTTCTCATGGCGGAACTaGCAGAACGTGTGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AALEENSSSSSKAQLSFFFSWRN*QNVCLY Trigger: GTACAGGCACACGTTCTGGCAGTTCCGCCATGAGAA...AAAGAAGCTTAGCTGAGCCTTGCTGCTGCTCGAGCTGTTTTCCTCCAGGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACAGCAGAGAACCTGTCCGTGTCTCTGTTTTCATCCATCAGTTTTAGAGCGTGCGCCTCGAATTTaGCGAGGCGCAGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAQQRTCPCLCFHPSVLERAPRI*RGAAGS Trigger: GCTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACG...CTCTAAAACTGATGGATGAAAACAGAGACACGGACAGGTTCTCTGCTGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTCTTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPSSLTK*RLSTSC Trigger: GCACGAGGTGCTTAACCTCCACTTCGTGAGCGAAGA...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCCCGAGAGGAAGAAGATaGAGTCGCTGTAGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDCGIPLEAQALGCLLKPPRGRR*SRCSRS Trigger: GGACCTACTACAGCGACTCCATCTTCTTCCTCTCGG...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR TCA 90 bp | AGCCCTGAACACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTCCCCGAGCCAGCACTaGAGTACTTCTGCATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPEHWPENKHRDSRVLKVSPSQH*STSAWP Trigger: AGGCCATGCAGAAGTACTTCAGTGCTGGCTCGGGGA...GACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | CTTGAAGCCAGCACCAAGCAACATGAACATCTGGAGGAGGTACAAAGCCTCCTGAGGTTAAGCACCTCGTaGGCCTCGAATTTGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEASTKQHEHLEEVQSLLRLSTS*ASNLAR Trigger: CCTCGCCAAATTCGAGGCGCACGAGGTGCTTAACCT...CAGGAGGCTTTGTACCTCCTCCAGATGTTCATGTTGCTTGGTGCTGGCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | ACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTATTCATCAGGCCTCTTGGTGGCGCTaGAGAAGGTCTCCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGQRTNTVTQEFSKSIHQASWWR*RRSPGL Trigger: CAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGC...CTGATGAATAGACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACAGCAGAGAACCTGTCCGTGTCTCTGTTTTCATCCATCAGTTTTAGAGTGGCCACCTCGCGGCTaGCCTCTTCGCTCACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAQQRTCPCLCFHPSVLEWPPRG*PLRSRS Trigger: ACTTCGTGAGCGAAGAGGCCAGCCGCGAGGTGGCCA...CTCTAAAACTGATGGATGAAAACAGAGACACGGACAGGTTCTCTGCTGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS-3UTR CCA 90 bp | GACTCACAAAGCCCGTCTCAAGCACACAGAGAAATGGTACTCACTTCTGGGAAGGTCTTGGGGTTCTCATaGCGGAACTGCCAGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSQSPSQAHREMVLTSGKVLGFS*RNCQNV Trigger: CACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGAC...CTTCCCAGAAGTGAGTACCATTTCTCTGTGTGCTTGAGACGGGCTTTGTGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | GACTCACAAAGCCCGTCTCAAGCACACAGAGAAATGGTACTCACTTCTGGGAAGGTGCAGTCCAGCACATaGAAGAGTTCAGGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSQSPSQAHREMVLTSGKVQSST*KSSGCS Trigger: GGAGCACCCTGAACTCTTCCATGTGCTGGACTGCAC...CTTCCCAGAAGTGAGTACCATTTCTCTGTGTGCTTGAGACGGGCTTTGTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATAGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKSIHQLVSVAHGTDYIGPSTR*TAAGSR Trigger: CCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACC...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | GAGCAGTCAGTATTCATAACCGTCAAGACATCTTTCCAGCCCAAGAAACACTTTGCACTGAAGTACTTCTaGATGGCCTCCACGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSVFITVKTSFQPKKHFALKYF*MASTTG Trigger: CCCCGTCGTGGAGGCCATGCAGAAGTACTTCAGTGC...AAAGTGTTTCTTGGGCTGGAAAGATGTCTTGACGGTTATGAATACTGACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCCAGCACCAAGCAACATGAACATCTGGAGGAGGTACAAAGCCTCCTGAGCACAGCAACATCATaGAAGATGACCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEASTKQHEHLEEVQSLLSTATS*KMTLHL Trigger: CAAGTGCAAGGTCATCTTCCATGATGTTGCTGTGCT...CAGGAGGCTTTGTACCTCCTCCAGATGTTCATGTTGCTTGGTGCTGGCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACAGCAGAGAACCTGTCCGTGTCTCTGTTTTCATCCATCAGTTTTAGAGTCTTTGGGCATGATCTaGTGCATGGCAACCGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAQQRTCPCLCFHPSVLESLGMI*CMATER Trigger: CCTCTCGGTTGCCATGCACCAGATCATGCCCAAAGA...CTCTAAAACTGATGGATGAAAACAGAGACACGGACAGGTTCTCTGCTGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 72 bp | CCACCTCTTCTCTCACCAAGCATTAGAGCCTGCCGCTaGAAATGCTTAGTTGGTCTAGCAAAGCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLSPSIRACR*KCLVGLAKPVL Trigger: AAGAACTGGCTTTGCTAGACCAACTAAGCATTTCAAGCGGCAGGCTCTAATGCTTGGTGAGAGAAGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CCA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATACCCCAACTCTGGTCTTaGGGTTCTCATGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FSKSIHQLVSVAHGTDYIPQLWS*GSHGGT Trigger: AGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGG...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 72 bp | TTATGTGTTCAGTCTTTATCTAATGAGGTGCTGCTCTaGAAGCCAGCACCAAGCAACATGAACATCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVQSLSNEVLL*KPAPSNMNIWR Trigger: CCTCCAGATGTTCATGTTGCTTGGTGCTGGCTTCAAGAGCAGCACCTCATTAGATAAAGACTGAACACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR GCA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATATACTTGTCAGCAAGCTaGTGTACCCACGAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKSIHQLVSVAHGTDYIYLSAS*CTHEGS Trigger: GGAACCTTCGTGGGTACAGCAGCTTGCTGACAAGTA...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAACCACTATGTAGTTGCTGGGAATaGAACTCAGGACCTCTAAAAGAGCAGTCAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPLCSCWE*NSGPLKEQSVF Trigger: GAATACTGACTGCTCTTTTAGAGGTCCTGAGTTCAATTCCCAGCAACTACATAGTGGTTCACAACCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| 3UTR CAA 72 bp | GCATTTCCTGGTACATTAAATATTCCTTCAAATGATTaGCGATATATTCCACCATACGGTTGCAGTATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFPGTLNIPSND*RYIPPYGCSMH Trigger: ATGCATACTGCAACCGTATGGTGGAATATATCGCAAATCATTTGAAGGAATATTTAATGTACCAGGAAATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | GCGGCGTGGGCGCGGCGGCCCCGGCGCGGGCCTCCTTCAGCCTCTTaGTGGCGCTGGAGAAGGTCTCCCGGCCTGAGCCCAGGTAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAWARRPRRGPPSAS*WRWRRSPGLSPGSR Trigger: TCTACTACCTGGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCCGCCGCGCCCACGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | GCGTGGGCGCGGCGGCCCCGGCGCGGGCCTCCTTCAGCCTCTTGGTaGCGCTGGAGAAGGTCTCCCGGCCTGAGCCCAGGTAGTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWARRPRRGPPSASW*RWRRSPGLSPGSRR Trigger: CCTTCTACTACCTGGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCCGCCGCGCCCACGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | GCGCGGCGGCCCCGGCGCGGGCCTCCTTCAGCCTCTTGGTGGCGCTaGAGAAGGTCTCCCGGCCTGAGCCCAGGTAGTAGAAGGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ARRPRRGPPSASWWR*RRSPGLSPGSRRRT Trigger: TGTGCGCCTTCTACTACCTGGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCCGCCGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 90 bp | GGCCTCCTTCAGCCTCTTGGTGGCGCTGGAGAAGGTCTCCCGGCCTaGGCCCAGGTAGTAGAAGGCGCACACCGCCAGCGCCGCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLQPLGGAGEGLPA*AQVVEGAHRQRRGQ Trigger: CTGGCCGCGGCGCTGGCGGTGTGCGCCTTCTACTACCTGGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 90 bp | CCACCCGAGCCTTGGCCTGCAGCGGCGCGTTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGTAGTCCACCGGGACCACCACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPEPWPAAARCAPPW*TSSAGGSPPGPPRR Trigger: GCGGCGTGGTGGTCCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAACGCGCCGCTGCAGGCCAAGGCTCGGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 90 bp | TCGCGGCTGGCCTCTTCGCTCACGAAGTGGAGGTTAAGCACCTCGTaGGCCTCGAATTTGGCGAGGCGCAGCAGGGAGCTCAGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SRLASSLTKWRLSTS*ASNLARRSRELSAT Trigger: GGTGGCGCTGAGCTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACGAGGTGCTTAACCTCCACTTCGTGAGCGAAGAGGCCAGCCGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTGAACACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCCCGCCCTCCAGGCTCTaGGCCTTGGCCCCGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPEHWPENKHRDSRVLKVPPSRL*ALAPEA Trigger: GGCCTCCGGGGCCAAGGCCAAGAGCCTGGAGGGCGG...GACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 90 bp | GAGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACTCCACTGTTaGAGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETGAWPPGSATSLHC*SQGVLQAEGPQLWS Trigger: AGACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCCCTGGCTTCAACAGTGGAGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | GCTGCCCTGGAGGAAAACAGCTCGAGCAGCAGCAAGGCTCAGCTAAGCTTCTTTAAGATGACCTTGCACTaGAAGCCGGCGGCGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AALEENSSSSSKAQLSFFKMTLH*KPAAGG Trigger: GCCGCCCGCCGCCGGCTTCAAGTGCAAGGTCATCTT...AAAGAAGCTTAGCTGAGCCTTGCTGCTGCTCGAGCTGTTTTCCTCCAGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 90 bp | AGCTGCCGGTTCCAGGTGCAGTCCAGCACATGGAAGAGTTCAGGGTaGTCCATGCCAATCATGGTGAAGAAGTCCTGGTCCCCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRFQVQSSTWKSSG*SMPIMVKKSWSPRW Trigger: CCACCTGGGGGACCAGGACTTCTTCACCATGATTGGCATGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 90 bp | TGTAGCCATGGTCCCTCCACCAGGTGCACAGCTGCCGGTTCCAGGTaGAGTCCAGCACATGGAAGAGTTCAGGGTGCTCCATGCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: CSHGPSTRCTAAGSR*SPAHGRVQGAPCQS Trigger: TGATTGGCATGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | AGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTCTTGGGGTTCTCATaGCGGAACTGCCAGAACGTGTGCCTGTACACAGGCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGGGSPTLVLGFS*RNCQNVCLYTGCIS Trigger: AGAGATGCAGCCTGTGTACAGGCACACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCCTGAAGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | GGGTGCTCCATGCCAATCATGGTGAAGAAGTCCTGGTCCCCCAGGTaGCCCCGGAAGTGGTACTTGTCAGCAAGCTGCTGTACCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCSMPIMVKKSWSPR*PRKWYLSASCCTHE Trigger: TTCGTGGGTACAGCAGCTTGCTGACAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGACTTCTTCACCATGATTGGCATGGAGCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 90 bp | AGTATGCCTGGAAGACATCGCTGTAGCCATGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGGTGCAGTCCAGCACATGGAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SMPGRHRCSHGPSTR*TAAGSRCSPAHGRV Trigger: AACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGCGATGTCTTCCAGGCATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS GCA 90 bp | GCAGTTCCCATGGTAGATCTTGACGTGGCCCTCACAGCGGAAGTATaGCTGGAAGACATCGCTGTAGCCATGGTCCCTCCACCAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVPMVDLDVALTAEV*LEDIAVAMVPPPGA Trigger: TGCACCTGGTGGAGGGACCATGGCTACAGCGATGTCTTCCAGGCATACTTCCGCTGTGAGGGCCACGTCAAGATCTACCATGGGAACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | TGGAAGAGTTCAGGGTGCTCCATGCCAATCATGGTGAAGAAGTCCTaGTCCCCCAGGTGGCCCCGGAAGTGGTACTTGTCAGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WKSSGCSMPIMVKKS*SPRWPRKWYLSASC Trigger: GCAGCTTGCTGACAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGACTTCTTCACCATGATTGGCATGGAGCACCCTGAACTCTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | CTCCACCAGGTGCACAGCTGCCGGTTCCAGGTGCAGTCCAGCACATaGAAGAGTTCAGGGTGCTCCATGCCAATCATGGTGAAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHQVHSCRFQVQSST*KSSGCSMPIMVKKS Trigger: GGACTTCTTCACCATGATTGGCATGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | ACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTATTCATCAGAGCGCCACCCGAGCCTaGGCCTGCAGCGGCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGQRTNTVTQEFSKSIHQSATRA*ACSGAL Trigger: CAACGCGCCGCTGCAGGCCAAGGCTCGGGTGGCGCT...CTGATGAATAGACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS-3UTR CAA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCTCATGGAAGATGACCTaGCACTTGAAGCCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WDCGIPLEAQALGCLLKPSWKMT*HLKPAA Trigger: CGCCGCCGGCTTCAAGTGCAAGGTCATCTTCCATGA...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 90 bp | AGAGGAAGAAGATGGAGTCGCTGTAGTAGGTCCCCGAGCCAGCACTaGAGTACTTCTGCATGGCCTCCACGACGGGGAAGAGCTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRRWSRCSRSPSQH*STSAWPPRRGRAYL Trigger: CAGATAAGCTCTTCCCCGTCGTGGAGGCCATGCAGAAGTACTTCAGTGCTGGCTCGGGGACCTACTACAGCGACTCCATCTTCTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGAACACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCGCCTCCTTCAGCCTCTaGGTGGCGCTGGAGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPEHWPENKHRDSRVLKVASFSL*VALEKV Trigger: GACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGC...GACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGTGTTCAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS CCA 90 bp | CCTGTACACAGGCTGCATCTCTCTGGCTATGCCGATAACAGCGCCTaGCAGAAAGTTGTCGAACTCCTCAAACAGCTCTCGGATGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVHRLHLSGYADNSA*QKVVELLKQLSDVG Trigger: ACCAACATCCGAGAGCTGTTTGAGGAGTTCGACAACTTTCTGCCAGGCGCTGTTATCGGCATAGCCAGAGAGATGCAGCCTGTGTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS-3UTR CAA 90 bp | TGGGACTGTGGCATTCCTTTGGAGGCTCAAGCCCTGGGCTGCTTGTTAAAACCCAACATCACTCCACTGTaGAAGCCAGGGAGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WDCGIPLEAQALGCLLKPNITPL*KPGSPS Trigger: TGAAGGACTCCCTGGCTTCAACAGTGGAGTGATGTT...GGGTTTTAACAAGCAGCCCAGGGCTTGAGCCTCCAAAGGAATGCCACAGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGTCAGTATTCATAACCGTCAAGACATCTTTCCAGCCCAAGAAACACTTTTCGTGCGCCTCGAATTaGGCGAGGCGCAGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EQSVFITVKTSFQPKKHFSCASN*ARRSRE Trigger: CTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACGA...AAAGTGTTTCTTGGGCTGGAAAGATGTCTTGACGGTTATGAATACTGACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 90 bp | AACAGCTCTCGGATGTTGGTCTTATACTTCAGGTCAAGGTCCAGCTaGATGATCCTCGGGATCTCTTTGGGCATGATCTGGTGCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: NSSRMLVLYFRSRSS*MILGISLGMIWCMA Trigger: TGCCATGCACCAGATCATGCCCAAAGAGATCCCGAGGATCATCCAGCTGGACCTTGACCTGAAGTATAAGACCAACATCCGAGAGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATAGCCTGCAGCGGCGCGTaGTGCTCCGCCTTGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: FSKSIHQLVSVAHGTDYIACSGA*CSALVN Trigger: GTTCACCAAGGCGGAGCACAACGCGCCGCTGCAGGC...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | ACTGGCCAGAGAACAAACACCGTGACTCAAGAGTTCTCAAAGTCTATTCATCAGGCGTTGTGCTCCGCCTaGGTGAACATCATCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TGQRTNTVTQEFSKSIHQALCSA*VNIISR Trigger: CCTGCTGATGATGTTCACCAAGGCGGAGCACAACGC...CTGATGAATAGACTTTGAGAACTCTTGAGTCACGGTGTTTGTTCTCTGGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | ACAGCACAGCAGAGAACCTGTCCGTGTCTCTGTTTTCATCCATCAGTTTTAGAGGCGCCTGGCAGAAAGTaGTCGAACTCCTCAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: TAQQRTCPCLCFHPSVLEAPGRK*SNSSNS Trigger: GCTGTTTGAGGAGTTCGACAACTTTCTGCCAGGCGC...CTCTAAAACTGATGGATGAAAACAGAGACACGGACAGGTTCTCTGCTGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | GAGCAGTCAGTATTCATAACCGTCAAGACATCTTTCCAGCCCAAGAAACACTTTTCCCCAACTCTGGTCTaGGGGTTCTCATGGCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: EQSVFITVKTSFQPKKHFSPTLV*GFSWRN Trigger: GTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGA...AAAGTGTTTCTTGGGCTGGAAAGATGTCTTGACGGTTATGAATACTGACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAAAGTCTATTCATCAGCTAGTGTCTGTCGCTCATGGTACTGACTATATAATCCTCGGGATCTCTTaGGGCATGATCTGGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FSKSIHQLVSVAHGTDYIILGIS*GMIWCM Trigger: CATGCACCAGATCATGCCCAAAGAGATCCCGAGGAT...TATATAGTCAGTACCATGAGCGACAGACACTAGCTGATGAATAGACTTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS-3UTR CAA 90 bp | GAGCAGTCAGTATTCATAACCGTCAAGACATCTTTCCAGCCCAAGAAACACTTTAACAGCTCTCGGATGTaGGTCTTATACTTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: EQSVFITVKTSFQPKKHFNSSRM*VLYFRS Trigger: TGACCTGAAGTATAAGACCAACATCCGAGAGCTGTT...AAAGTGTTTCTTGGGCTGGAAAGATGTCTTGACGGTTATGAATACTGACTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | AGTCCACCGGGACCACCACGCCGCCCTCCAGGCTCTTaGCCTTGGCCCCGGAGGCCGGCGCCGCGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SPPGPPRRPPGS*PWPRRPAPRSP Trigger: GGGGCTCCGCGGCGCCGGCCTCCGGGGCCAAGGCCAAGAGCCTGGAGGGCGGCGTGGTGGTCCCGGTGGACT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | CGCAGTAGTGCGAGCGCAACGCGCCCAGGCGCGCCATaGCCCGAGCGCACGCAGCTCCGCCTCGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RSSASATRPGAP*PERTQLRLGGG Trigger: GCCTCCTCCGAGGCGGAGCTGCGTGCGCTCGGGCCATGGCGCGCCTGGGCGCGTTGCGCTCGCACTACTGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | CACTTGAAGCCGGCGGCGGGCGGCAGGAGCTCCCGCAGCAGGGCCTaGGCCACCTCGCGGCTGGCCTCTTCGCTCACGAAGTGGAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: HLKPAAGGRSSRSRA*ATSRLASSLTKWRL Trigger: TAACCTCCACTTCGTGAGCGAAGAGGCCAGCCGCGAGGTGGCCAAGGCCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCCGGCTTCAAGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 72 bp | CAGCCTCTTGGTGGCGCTGGAGAAGGTCTCCCGGCCTaGGCCCAGGTAGTAGAAGGCGCACACCGCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QPLGGAGEGLPA*AQVVEGAHRQR Trigger: GCGCTGGCGGTGTGCGCCTTCTACTACCTGGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 72 bp | CTCAGCGCCACCCGAGCCTTGGCCTGCAGCGGCGCGTaGTGCTCCGCCTTGGTGAACATCATCAGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSATRALACSGA*CSALVNIISRW Trigger: CCACCTGCTGATGATGTTCACCAAGGCGGAGCACAACGCGCCGCTGCAGGCCAAGGCTCGGGTGGCGCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | TCTTCGCTCACGAAGTGGAGGTTAAGCACCTCGTGCGCCTCGAATTaGGCGAGGCGCAGCAGGGAGCTCAGCGCCACCCGAGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTKWRLSTSCASN*ARRSRELSATRALA Trigger: GGCCAAGGCTCGGGTGGCGCTGAGCTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACGAGGTGCTTAACCTCCACTTCGTGAGCGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 72 bp | CCTTGGCCTGCAGCGGCGCGTTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGTAGTCCACCGGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PWPAAARCAPPW*TSSAGGSPPGP Trigger: TGGTCCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAACGCGCCGCTGCAGGCCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 72 bp | ACGAAGTGGAGGTTAAGCACCTCGTGCGCCTCGAATTaGGCGAGGCGCAGCAGGGAGCTCAGCGCCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TKWRLSTSCASN*ARRSRELSATR Trigger: TCGGGTGGCGCTGAGCTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACGAGGTGCTTAACCTCCACTTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | GCCTCTTCGCTCACGAAGTGGAGGTTAAGCACCTCGTaGGCCTCGAATTTGGCGAGGCGCAGCAGGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSLTKWRLSTS*ASNLARRSREL Trigger: GAGCTCCCTGCTGCGCCTCGCCAAATTCGAGGCGCACGAGGTGCTTAACCTCCACTTCGTGAGCGAAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | GGTCCCTCCACCAGGTGCACAGCTGCCGGTTCCAGGTaGAGTCCAGCACATGGAAGAGTTCAGGGTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPSTRCTAAGSR*SPAHGRVQGAP Trigger: TGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | TTGGCCACCTCGCGGCTGGCCTCTTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGCGCCTCGAATTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LATSRLASSLTK*RLSTSCASNLA Trigger: CGCCAAATTCGAGGCGCACGAGGTGCTTAACCTCCACTTCGTGAGCGAAGAGGCCAGCCGCGAGGTGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | GGCGGAGGGTCCCCAACTCTGGTCTTGGGGTTCTCATaGCGGAACTGCCAGAACGTGTGCCTGTACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGSPTLVLGFS*RNCQNVCLYTG Trigger: GCCTGTGTACAGGCACACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | GGAGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTCTTaGGGTTCTCATGGCGGAACTGCCAGAACGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVLQAEGPQLWS*GSHGGTARTCA Trigger: GGCACACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | AGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCAACTCTaGTCTTGGGGTTCTCATGGCGGAACTGCCAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: SQGVLQAEGPQL*SWGSHGGTART Trigger: CGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 72 bp | GGGAGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTCTaGGGGTTCTCATGGCGGAACTGCCAGAACGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPSGGGSPTLV*GFSWRNCQNVC Trigger: GCACACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | GGAGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACTCCACTGTaGAAGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: GDWRMASRFSNITPL*KPGSPSGGGSPTLV Trigger: GACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCCCTGGCTTCAACAGTGGAGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | GGAAGACATCGCTGTAGCCATGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGGTGCAGTCCAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: GRHRCSHGPSTR*TAAGSRCSPAH Trigger: ATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGCGATGTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 72 bp | CGCATGGCCTCCAGGTTCAGCAACATCACTCCACTGTaGAAGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RMASRFSNITPL*KPGSPSGGGSP Trigger: TGGGGACCCTCCGCCTGAAGGACTCCCTGGCTTCAACAGTGGAGTGATGTTGCTGAACCTGGAGGCCATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 72 bp | GCATGGCCTCCAGGTTCAGCAACATCACTCCACTGTTaGAGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: AWPPGSATSLHC*SQGVLQAEGPQ Trigger: TTGGGGACCCTCCGCCTGAAGGACTCCCTGGCTTCAACAGTGGAGTGATGTTGCTGAACCTGGAGGCCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | TTGAAGCCAGGGAGTCCTTCAGGCGGAGGGTCCCCAACTCTGGTCTaGGGGTTCTCATGGCGGAACTGCCAGAACGTGTGCCTGTACACA | + |
|
Preference number: 6 (lower is better) Translates to: LKPGSPSGGGSPTLV*GFSWRNCQNVCLYT Trigger: TGTGTACAGGCACACGTTCTGGCAGTTCCGCCATGAGAACCCCAAGACCAGAGTTGGGGACCCTCCGCCTGAAGGACTCCCTGGCTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | ATGGTGAAGAAGTCCTGGTCCCCCAGGTGGCCCCGGAAGTGGTACTaGTCAGCAAGCTGCTGTACCCACGAAGGTTCCAGCAGATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MVKKSWSPRWPRKWY*SASCCTHEGSSRWL Trigger: CAGCCATCTGCTGGAACCTTCGTGGGTACAGCAGCTTGCTGACAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGACTTCTTCACCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 72 bp | AGATGGAGTCGCTGTAGTAGGTCCCCGAGCCAGCACTaGAGTACTTCTGCATGGCCTCCACGACGGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RWSRCSRSPSQH*STSAWPPRRGR Trigger: TCTTCCCCGTCGTGGAGGCCATGCAGAAGTACTTCAGTGCTGGCTCGGGGACCTACTACAGCGACTCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | TCAGGGTGCTCCATGCCAATCATGGTGAAGAAGTCCTaGTCCCCCAGGTGGCCCCGGAAGTGGTACTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGCSMPIMVKKS*SPRWPRKWYLS Trigger: TGACAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGACTTCTTCACCATGATTGGCATGGAGCACCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | GTGCACAGCTGCCGGTTCCAGGTGCAGTCCAGCACATaGAAGAGTTCAGGGTGCTCCATGCCAATCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VHSCRFQVQSST*KSSGCSMPIMV Trigger: CACCATGATTGGCATGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAACCGGCAGCTGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | ATGCCAATCATGGTGAAGAAGTCCTGGTCCCCCAGGTaGCCCCGGAAGTGGTACTTGTCAGCAAGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MPIMVKKSWSPR*PRKWYLSASCC Trigger: ACAGCAGCTTGCTGACAAGTACCACTTCCGGGGCCACCTGGGGGACCAGGACTTCTTCACCATGATTGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS TCA 72 bp | CTGGGATGGGTGTGTTGCAGTTCCCATGGTAGATCTTaGCGTGGCCCTCACAGCGGAAGTATGCCTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGWVCCSSHGRS*RGPHSGSMPGR Trigger: TCTTCCAGGCATACTTCCGCTGTGAGGGCCACGTCAAGATCTACCATGGGAACTGCAACACACCCATCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | ATGGTAGATCTTGACGTGGCCCTCACAGCGGAAGTATaGCTGGAAGACATCGCTGTAGCCATGGTCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MVDLDVALTAEV*LEDIAVAMVPP Trigger: TGGAGGGACCATGGCTACAGCGATGTCTTCCAGGCATACTTCCGCTGTGAGGGCCACGTCAAGATCTACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | TGGATGATCCTCGGGATCTCTTTGGGCATGATCTGGTaGATGGCAACCGAGAGGAAGAAGATGGAGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WMILGISLGMIW*MATERKKMESL Trigger: CAGCGACTCCATCTTCTTCCTCTCGGTTGCCATGCACCAGATCATGCCCAAAGAGATCCCGAGGATCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS GCA 72 bp | TTCCAGGTGCAGTCCAGCACATGGAAGAGTTCAGGGTaGTCCATGCCAATCATGGTGAAGAAGTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQVQSSTWKSSG*SMPIMVKKSWS Trigger: GGACCAGGACTTCTTCACCATGATTGGCATGGAGCACCCTGAACTCTTCCATGTGCTGGACTGCACCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | AGCTGGATGATCCTCGGGATCTCTTTGGGCATGATCTaGTGCATGGCAACCGAGAGGAAGAAGATGGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWMILGISLGMI*CMATERKKMES Trigger: CGACTCCATCTTCTTCCTCTCGGTTGCCATGCACCAGATCATGCCCAAAGAGATCCCGAGGATCATCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | AGGCTGCATCTCTCTGGCTATGCCGATAACAGCGCCTaGCAGAAAGTTGTCGAACTCCTCAAACAGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLHLSGYADNSA*QKVVELLKQLS Trigger: CGAGAGCTGTTTGAGGAGTTCGACAACTTTCTGCCAGGCGCTGTTATCGGCATAGCCAGAGAGATGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 72 bp | TCTCTGGCTATGCCGATAACAGCGCCTGGCAGAAAGTaGTCGAACTCCTCAAACAGCTCTCGGATGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLAMPITAPGRK*SNSSNSSRMLV Trigger: GACCAACATCCGAGAGCTGTTTGAGGAGTTCGACAACTTTCTGCCAGGCGCTGTTATCGGCATAGCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CAA 90 bp | GGCTGCATCTCTCTGGCTATGCCGATAACAGCGCCTGGCAGAAAGTaGTCGAACTCCTCAAACAGCTCTCGGATGTTGGTCTTATACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCISLAMPITAPGRK*SNSSNSSRMLVLYF Trigger: GAAGTATAAGACCAACATCCGAGAGCTGTTTGAGGAGTTCGACAACTTTCTGCCAGGCGCTGTTATCGGCATAGCCAGAGAGATGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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| CDS CCA 72 bp | CGGATGTTGGTCTTATACTTCAGGTCAAGGTCCAGCTaGATGATCCTCGGGATCTCTTTGGGCATGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RMLVLYFRSRSS*MILGISLGMIW Trigger: CCAGATCATGCCCAAAGAGATCCCGAGGATCATCCAGCTGGACCTTGACCTGAAGTATAAGACCAACATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055389.9 |
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