Pregenerated sensors for XRN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027433Ensembl transcript IDs: ENSMUST00000028921.6
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTCTGGAAAGCAGCATaGAACAGTGAGATCAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: FKEMLSNICSSAECAAQCLWKAA*NSEIRS Trigger: TGATCTGATCTCACTGTTTCATGCTGCTTTCCAGAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAGACCCACTGTATTATaGCATACACATCTCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FKEMLSNICSSAECAAQCRPTVL*HTHLWK Trigger: TTTCCAGAGATGTGTATGGCATAATACAGTGGGTCT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAGCAGCATGAAACAGTaGGATCAGATCAGTAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FKEMLSNICSSAECAAQCSSMKQ*DQISKN Trigger: ATTTTTACTGATCTGATCTCACTGTTTCATGCTGCT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| 3UTR TCA 72 bp | ACTGTATTATGCCATACACATCTCTGGAAAGCAGCATaGAACAGTGAGATCAGATCAGTAAAAATATACACA | + |
|
Preference number: 3 (lower is better) Translates to: TVLCHTHLWKAA*NSEIRSVKIYT Trigger: TGTGTATATTTTTACTGATCTGATCTCACTGTTTCATGCTGCTTTCCAGAGATGTGTATGGCATAATACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| 3UTR GCA 72 bp | TGTTTTCAAAGAAATGTTGAGCAATATATGCTCGTCTaGAGAATGTGCAGCTCAATGTCCATACCTAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: CFQRNVEQYMLV*RMCSSMSIPNY Trigger: ATAATTAGGTATGGACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACGGGTACTTGCGGCTaGGCCAGCGGAAGAACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTGTCG*ASGRTP Trigger: CGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCGGTTAAAGCCAAGCTaGGGTTTCCATTGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCRLKPS*GFHCRP Trigger: TGGGCGGCAATGGAAACCTCAGCTTGGCTTTAACCG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCTTCCCGAGGGTGGTaGCAAAGGGTATTTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSSRGW*QRVFPS Trigger: GGACGGAAATACCCTTTGCCACCACCCTCGGGAAGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGTTTGTCTTCAGGATaGGTGCAGGGGTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCGLSSG*VQGWMI Trigger: GATCATCCACCCCTGCACTCATCCTGAAGACAAACC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAATCAGGGTCACTCATaGGCTTCCGCCATGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCNQGHS*ASAMLE Trigger: CTCCAACATGGCGGAAGCTCATGAGTGACCCTGATT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCCTCTCTGACTCGCTaGTTCTCAACTGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSSLTR*FSTAAS Trigger: GGAAGCAGCAGTTGAGAAGCAGCGAGTCAGAGAGGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTATCTTCCCGAGGGTaGTGGCAAAGGGTATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCVSSRG*WQRVFP Trigger: CGGAAATACCCTTTGCCACCACCCTCGGGAAGATAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTTCCTTTGATGCTCTaGACCTCCTTGAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLPLML*TSLNAA Trigger: AGCAGCGTTCAAGGAGGTTCAGAGCATCAAAGGAAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGTTCTCTTCTGGAGTaGGGTCTGGGTACACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCCSLLE*GLGTPL Trigger: AAGAGGTGTACCCAGACCTCACTCCAGAAGAGAACA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGTTGCTGGCTTTCTTaGTCCTGGAAGCATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCCCWLS*SWKHCS Trigger: GCTGCAATGCTTCCAGGAGCAAGAAAGCCAGCAACA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCCATTGCCGCCCATTaGTGGATTTTTCCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSIAAH*WIFPSH Trigger: GTGACTGGGAAAAATCCAGCAATGGGCGGCAATGGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCTCCTGTTCTCTTCTaGAGTGAGGTCTGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSPVLF*SEVWVH Trigger: GTGTACCCAGACCTCACTCCAGAAGAGAACAGGAGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTATTGCCGCCCATTGCTaGATTTTTCCCAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCIAAHC*IFPSHQ Trigger: CTGGTGACTGGGAAAAATCCAGCAATGGGCGGCAAT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGTTCCCCTGGTAATTaGCAGGTGGTAGTGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCCSPGN*QVVVQC Trigger: ACACTGCACTACCACCTGCCAATTACCAGGGGAACA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTGACCTCTCAGCAGTaGCCTGTAATTGTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLTSQQ*PVIVPL Trigger: CAGGGGAACAATTACAGGCCACTGCTGAGAGGTCAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTATTTCCGTCCTTCTCTaGGATATCCCTGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCISVLL*DIPVSL Trigger: GAGGGAGACAGGGATATCCCAGAGAAGGACGGAAAT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGAGTGCAGGGGTGGATaGTCCCATTCATATCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCECRGG*SHSYPN Trigger: ATTTGGATATGAATGGGATCATCCACCCCTGCACTC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCAAGTATTTCCTCTCTaGCTCGCTGCTTCTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCQVFPL*LAASQL Trigger: CAGTTGAGAAGCAGCGAGTCAGAGAGGAAATACTTG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTAAGCTGGCCATGGTaGGTTCTCTTTCCAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCVSWPW*VLFPDT Trigger: AGTATCTGGAAAGAGAACTCACCATGGCCAGCTTAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCGCTGCTTCTCAACTaGTGCTTCCATTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSLLLN*CFHSFL Trigger: AAGGAAGGAATGGAAGCAGCAGTTGAGAAGCAGCGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTCTCAAATCTATGCTaGTGGAAAAGAGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLSNLC*WKRGGG Trigger: CCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACCGTTGCATTCTTTTaGCTTCTCCTCCACGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTVAFF*LLLHAV Trigger: AACTGCGTGGAGGAGAAGCCAAAAGAATGCAACGGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGGTCATGGTTAGGCTaGGCTCTTTGTCTTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCGSWLG*ALCLLM Trigger: CATTAGAAGACAAAGAGCCCAGCCTAACCATGACCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTGACACAATTCAGGTaGCACATCAACTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCVTQFR*HINWLC Trigger: ACAGAGCCAGTTGATGTGCCACCTGAATTGTGTCAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCCTCGCCAGGAATCTTaGGGCCTCATATTTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCPRQES*GLIFDI Trigger: TATGTCAAATATGAGGCCCCAAGATTCCTGGCGAGG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCAAATCTATGCTGCTaGAAAAGAGGAGGAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSNLCC*KRGGGP Trigger: AGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGCTGCATTTTGGTTTTaGATCATCCGGTTCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCAAFWF*IIRFHG Trigger: GCCATGGAACCGGATGATCCAAAACCAAAATGCAGC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGCTCTGAACCTCCTTaGACGCTGCTGATTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCCSEPP*TLLIHF Trigger: AAAATGAATCAGCAGCGTTCAAGGAGGTTCAGAGCA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACCTCGTGTCCAAACTaGTTACAAAGAGCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTSCPN*LQRAHG Trigger: ACCATGTGCTCTTTGTAATCAGTTTGGACACGAGGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAACCTTCACAATCCTTaGCCTCGTGTCCAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCNLHNP*PRVQTD Trigger: ATCAGTTTGGACACGAGGTCAAGGATTGTGAAGGTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGCCACCCCATCTATTaGCATGTAGAGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCCHPIY*HVEKSS Trigger: AGAAGACTTCTCTACATGGCAATAGATGGGGTGGCA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGATAAACTCCCCTTCTaGACAAGGAAGACTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCDKLPF*TRKTIC Trigger: GCAGATAGTCTTCCTTGTGCAGAAGGGGAGTTTATC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACACCCAGTCATCAATaGTCCTCTCCACATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTPSHQ*SSPHQM Trigger: CATTTGATGTGGAGAGGAGCATTGATGACTGGGTGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCCTCATTTCATAGGCTaGTTGTCTTGGATTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCPHFIG*LSWITG Trigger: GCCAGTAATCCAAGACAAGCAGCCTATGAAATGAGG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACAATGATGAGTATTTaGGTCATGGTTAGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTMMSI*VMVRLG Trigger: GCCCAGCCTAACCATGACCCAAATACTCATCATTGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTTGTCTTGGATTACTaGCTACTTGACAACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLVLDY*LLDNLV Trigger: CACCAGGTTGTCAAGTAGCCAGTAATCCAAGACAAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGGGAACATACTGTTTaGTCTGGAAGAATGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCGEHTV*SGRMAS Trigger: AGAAGCCATTCTTCCAGACCAAACAGTATGTTCCCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTTCAGAACTGTTGCTaGCTTTCTTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCFQNCC*LSCSWK Trigger: CTTCCAGGAGCAAGAAAGCCAGCAACAGTTCTGAAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCACCAACTGCTAACATaGTCATCTGTACTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCHQLLT*SSVLFA Trigger: TGCAAAGAGTACAGATGATCATGTTAGCAGTTGGTG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGAGTAAAAGCTGGTTaGTCTCTCTTCATCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCGVKAG*SLFILF Trigger: AAAGAGGATGAAGAGAGATCAACCAGCTTTTACTCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTTGAACCCAAGGCATaGGGTGTTAATATTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLEPKA*GVNIPL Trigger: TAGTGGAATATTAACACCTCATGCCTTGGGTTCAAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGATTACTGGCTACTTaGCAACCTGGTGAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCGLLAT*QPGEFL Trigger: AAGAAATTCACCAGGTTGTCAAGTAGCCAGTAATCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAAGTCGCGTAGTGGATaGAGTTTTCCCACAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCKSRSG*SFPTNK Trigger: TTTGTTTGTGGGAAAACTTCATCCACTACGCGACTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTGGGGCCTCATATTTaGCATAAGTTTTGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLGPHI*HKFWDL Trigger: CAGATCCCAAAACTTATGTCAAATATGAGGCCCCAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGGGGAGCCATCAGATaGAAAACTTGTATTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCWGAIR*KTCIRR Trigger: TCTCCTAATACAAGTTTTGCATCTGATGGCTCCCCA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTTCTCTCAAATCTATaGTGCTGGAAAAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCLLSNL*CWKRGG Trigger: TCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTATAGGCTGCTTGTCTTaGATTACTGGCTACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCIGCLS*ITGYLT Trigger: TGTCAAGTAGCCAGTAATCCAAGACAAGCAGCCTAT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTGGCTTTCTTGCTCCTaGAAGCATTGCAGCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCWLSCS*KHCSFK Trigger: TTTAAAGCTGCAATGCTTCCAGGAGCAAGAAAGCCA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAATACCTTCAAAGTCTaGGGCAAATGGTGCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCNTFKV*GKWCIM Trigger: CATTATGCACCATTTGCCTCAGACTTTGAAGGTATT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGAATCTTTACACCGTTaGATTCTTTTGGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCESLHR*ILLASP Trigger: AGGAGAAGCCAAAAGAATGCAACGGTGTAAAGATTC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAAGAAAGCCACCTTTTaGAAGTATTTCCTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCKKATF*KYFLSD Trigger: GTCAGAGAGGAAATACTTGCAAAAGGTGGCTTTCTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACAAGGAAGACTATCTaGAAGTTCATCATGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTRKTI*KFIMLS Trigger: GGAAAGCATGATGAACTTGCAGATAGTCTTCCTTGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACTGTCACTGTCTTCTaGTTTTCTCTTAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTVTVF*FSLNSS Trigger: GGAGGAATTAAGAGAAAAGCAGAAGACAGTGACAGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAATAGAGCAACACCTTaGCATGCATATTTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCNRATP*HAYFFP Trigger: TGGGAAGAAATATGCATGGCAAGGTGTTGCTCTATT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTCCCTTCTTTTCTCTTaGCAAACCTTCACAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCSLLFS*QTFTIL Trigger: AAGGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACTAGGAGTAAAAGCTaGTTGATCTCTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTRSKS*LISLHP Trigger: AGGATGAAGAGAGATCAACCAGCTTTTACTCCTAGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTACATACTGTTTGGTCTaGAAGAATGGCTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCTYCLV*KNGFFI Trigger: GATGAAGAAGCCATTCTTCCAGACCAAACAGTATGT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAAAATTAATACTGACTaGAGTGTTCTGTGTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCKINTD*SVLCQV Trigger: GACCTGACACAGAACACTGCAGTCAGTATTAATTTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTATTTGGCTGAAAGGCTaGATTTTGGTTTTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCIWLKG*ILVLDH Trigger: ATGATCCAAAACCAAAATGCAGCCTTTCAGCCAAAT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAAACTCCACATCATTTaGATTAGGTTTACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCKLHII*IRFTGI Trigger: GATGCCAGTAAACCTAATCCAAATGATGTGGAGTTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTCTTTTATTTCTTCTaGAGGAAGAAAGCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKEMLSNICSSAECAAQCFFYFF*RKKATF Trigger: AAAGGTGGCTTTCTTCCTCCAGAAGAAATAAAAGAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | TGTATCTTCCCGAGGGTGGTGGCAAAGGGTATTTCCGTCCTTCTCTaGGATATCCCTGTCTCCCTCCTCGGTGATCGTCACGTCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CIFPRVVAKGISVLL*DIPVSLLGDRHVWV Trigger: CACCCAGACGTGACGATCACCGAGGAGGGAGACAGGGATATCCCAGAGAAGGACGGAAATACCCTTTGCCACCACCCTCGGGAAGATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 90 bp | CATGGCAGTAGAGGTTCAGCTCCAACACTTCTCTCAAATCTATGCTaGTGGAAAAGAGGAGGAGGGCCTCGCCAGGAATCTTGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HGSRGSAPTLLSNLC*WKRGGGPRQESWGL Trigger: GAGGCCCCAAGATTCCTGGCGAGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAGTGTTGGAGCTGAACCTCTACTGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | GGCAGTAGAGGTTCAGCTCCAACACTTCTCTCAAATCTATGCTGCTaGAAAAGAGGAGGAGGGCCTCGCCAGGAATCTTGGGGCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GSRGSAPTLLSNLCC*KRGGGPRQESWGLI Trigger: TATGAGGCCCCAAGATTCCTGGCGAGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAGTGTTGGAGCTGAACCTCTACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | CCCGCAACATGGGCACAGGGGAACATACTGTTTGGTCTGGAAGAATaGCTTCTTCATCCAAAGAAAACGTCCCTTGAATCCCGTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PATWAQGNILFGLEE*LLHPKKTSLESRDT Trigger: TGTGTCACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGACCAAACAGTATGTTCCCCTGTGCCCATGTTGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | TGTCAGGTCCCGCAACATGGGCACAGGGGAACATACTGTTTGGTCTaGAAGAATGGCTTCTTCATCCAAAGAAAACGTCCCTTGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CQVPQHGHRGTYCLV*KNGFFIQRKRPLNP Trigger: GGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGACCAAACAGTATGTTCCCCTGTGCCCATGTTGCGGGACCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 90 bp | CAATGCTCCTCTCCACATCAAATGGGAATGGTAAGCTGGCCATGGTaGGTTCTCTTTCCAGATACTCTCGAAGGACATTCAGCCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCSSPHQMGMVSWPW*VLFPDTLEGHSAEG Trigger: TCCTTCGGCTGAATGTCCTTCGAGAGTATCTGGAAAGAGAACTCACCATGGCCAGCTTACCATTCCCATTTGATGTGGAGAGGAGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 90 bp | GGAGGAAGAAAGCCACCTTTTGCAAGTATTTCCTCTCTGACTCGCTaGTTCTCAACTGCTGCTTCCATTCCTTCCTTTGATGCTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRKPPFASISSLTR*FSTAASIPSFDALN Trigger: GTTCAGAGCATCAAAGGAAGGAATGGAAGCAGCAGTTGAGAAGCAGCGAGTCAGAGAGGAAATACTTGCAAAAGGTGGCTTTCTTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTATGATGGACGGGTACTaGCGGCTGAGCCAGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCMMDGY*RLSQRK Trigger: CTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCAT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 90 bp | GTGATGGCAAGTGAGGAAGGAAATCATTCCCCACAAAGAAGCACATaGACACCCAGTCATCAATGCTCCTCTCCACATCAAATGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VMASEEGNHSPQRST*TPSHQCSSPHQMGM Trigger: CATTCCCATTTGATGTGGAGAGGAGCATTGATGACTGGGTGTTCATGTGCTTCTTTGTGGGGAATGATTTCCTTCCTCACTTGCCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 90 bp | ACCAAACGATCAATTGCACCTTCCCTAATCTCTAGTGATGGCAAGTaGGGAAGGAAATCATTCCCCACAAAGAAGCACATGAACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKRSIAPSLISSDGK*GRKSFPTKKHMNTQ Trigger: CTGGGTGTTCATGTGCTTCTTTGTGGGGAATGATTTCCTTCCTCACTTGCCATCACTAGAGATTAGGGAAGGTGCAATTGATCGTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 90 bp | ATACTCTCGAAGGACATTCAGCCGAAGGAAGATAAACTCCCCTTCTaGACAAGGAAGACTATCTGCAAGTTCATCATGCTTTCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSKDIQPKEDKLPF*TRKTICKFIMLSLL Trigger: AAGAAGGGAAAGCATGATGAACTTGCAGATAGTCTTCCTTGTGCAGAAGGGGAGTTTATCTTCCTTCGGCTGAATGTCCTTCGAGAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTCTCCTCCACGCAGTaGACAATGATGGACGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCFSSTQ*TMMDGY Trigger: GTACCCGTCCATCATTGTCAACTGCGTGGAGGAGAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCACCGTTGCATTCTTTaGGCTTCTCCTCCACGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCHRCIL*ASPPRS Trigger: ACTGCGTGGAGGAGAAGCCAAAAGAATGCAACGGTG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCTGTTGCTGGCTTTCTaGCTCCTGGAAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCLLLAF*LLEALQ Trigger: CTGCAATGCTTCCAGGAGCAAGAAAGCCAGCAACAG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTGCCACCCCATCTATaGCCATGTAGAGAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCVPPHL*PCREVF Trigger: GAAGACTTCTCTACATGGCAATAGATGGGGTGGCAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTAGAAAGTTACCACTaGCAGCTGGGAAAACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCVESYH*QLGKPP Trigger: TGGGGGTTTTCCCAGCTGCAAGTGGTAACTTTCTAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTCCATTGCCGCCCATaGCTGGATTTTTCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCFHCRP*LDFSQS Trigger: TGACTGGGAAAAATCCAGCAATGGGCGGCAATGGAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAAGCTGAGGTTTCCATaGCCGCCCATTGCTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCKLRFP*PPIAGF Trigger: AAATCCAGCAATGGGCGGCAATGGAAACCTCAGCTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGCTGCATTTTGGTTTaGGATCATCCGGTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCGCILV*DHPVPW Trigger: CCATGGAACCGGATGATCCAAAACCAAAATGCAGCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 90 bp | GCCCTTTTCAAATTCAGAGGACATGTCTGCAATACCTTCAAAGTCTaGGGCAAATGGTGCATAATGGAATGGATAATACCACTTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALFKFRGHVCNTFKV*GKWCIMEWIIPLPG Trigger: TCCTGGAAGTGGTATTATCCATTCCATTATGCACCATTTGCCTCAGACTTTGAAGGTATTGCAGACATGTCCTCTGAATTTGAAAAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAACCTGGTGAATTTCTaGAACCCAAGGCATGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCNLVNF*NPRHEV Trigger: CACCTCATGCCTTGGGTTCAAGAAATTCACCAGGTT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCATAGGCTGCTTGTCTaGGATTACTGGCTACTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCHRLLV*DYWLLD Trigger: GTCAAGTAGCCAGTAATCCAAGACAAGCAGCCTATG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTTCTTGTAGTATCGTaGCTTCCAACCAGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCVLVVS*LPTSFP Trigger: TGGGAAGCTGGTTGGAAGCAACGATACTACAAGAAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAGGGGAACATACTGTTaGGTCTGGAAGAATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCRGTYC*VWKNGF Trigger: GAAGCCATTCTTCCAGACCAAACAGTATGTTCCCCT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | ATTATCAAACTCCACATCATTTGGATTAGGTTTACTGGCATCAACTaGAATCTTTACACCGTTGCATTCTTTTGGCTTCTCCTCCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: IIKLHIIWIRFTGIN*NLYTVAFFWLLLHA Trigger: TGCGTGGAGGAGAAGCCAAAAGAATGCAACGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGGAATCTTTACACCGTaGCATTCTTTTGGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCGIFTP*HSFGFS Trigger: GGAGAAGCCAAAAGAATGCAACGGTGTAAAGATTCC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCATTTCATAGGCTGCTaGTCTTGGATTACTGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCHFIGC*SWITGY Trigger: GTAGCCAGTAATCCAAGACAAGCAGCCTATGAAATG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTCAAAGAAAACGTCCCTaGAATCCCGTGACACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCQRKRP*NPVTQF Trigger: GAATTGTGTCACGGGATTCAAGGGACGTTTTCTTTG...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGCATCTGGTACTGATTaGGCTGAAAGGCTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCASGTD*AERLHF Trigger: AAAATGCAGCCTTTCAGCCAAATCAGTACCAGATGC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAGGCATTTAGCAAGATaGTCCATGAACTCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCRHLAR*SMNSVP Trigger: AGGAACTGAGTTCATGGACAATCTTGCTAAATGCCT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTGTTAGGCTGGGCTCTTaGTCTTCTAATGTAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCVRLGS*SSNVIH Trigger: ATGGATTACATTAGAAGACAAAGAGCCCAGCCTAAC...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTCCCTTCTTTTCTCTaGGCAAACCTTCACAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCFPSFL*ANLHNP Trigger: AGGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTAGGAGTAAAAGCTGGTaGATCTCTCTTCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCRSKSW*ISLHPL Trigger: AAGAGGATGAAGAGAGATCAACCAGCTTTTACTCCT...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 90 bp | TTTTCTCTTGGCAAACCTTCACAATCCTTGACCTCGTGTCCAAACTaGTTACAAAGAGCACATGGTTTAGGTTTATTTGGTTTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLGKPSQSLTSCPN*LQRAHGLGLFGLNS Trigger: AGAATTCAAACCAAATAAACCTAAACCATGTGCTCTTTGTAATCAGTTTGGACACGAGGTCAAGGATTGTGAAGGTTTGCCAAGAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | GATCCCATTCATATCCAAATACAGATTATCAAACTCCACATCATTTaGATTAGGTTTACTGGCATCAACTGGAATCTTTACACCGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DPIHIQIQIIKLHII*IRFTGINWNLYTVA Trigger: TGCAACGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAATCTGTATTTGGATATGAATGGGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 90 bp | TCCTGGAAGCATTGCAGCTTTAAAAACATAATCTTCAGCAAACTGTaGATCTTTAAAATTAATACTGACTGCAGTGTTCTGTGTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWKHCSFKNIIFSKL*IFKINTDCSVLCQV Trigger: GACCTGACACAGAACACTGCAGTCAGTATTAATTTTAAAGATCCACAGTTTGCTGAAGATTATGTTTTTAAAGCTGCAATGCTTCCAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGAAATGTTGAGCAATATATGCTCGTCTGCAGAATGTGCAGCTCAATGTTTTCATCTTCATTTTTaGGTGCTGGTTTGTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FKEMLSNICSSAECAAQCFHLHF*VLVCLQ Trigger: CTGAAGACAAACCAGCACCAAAAAATGAAGATGAAA...ACATTGAGCTGCACATTCTGCAGACGAGCATATATTGCTCAACATTTCTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 72 bp | TTCTCCTCCACGCAGTTGACAATGATGGACGGGTACTaGCGGCTGAGCCAGCGGAAGAACGCCGGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSTQLTMMDGY*RLSQRKNAGTP Trigger: GGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATTGTCAACTGCGTGGAGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | GATATCCCTGTCTCCCTCCTCGGTGATCGTCACGTCTaGGTGGATAGCCTCCAGGTCCTCCTAGCATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DIPVSLLGDRHV*VDSLQVLLASG Trigger: ACCAGATGCTAGGAGGACCTGGAGGCTATCCACCCAGACGTGACGATCACCGAGGAGGGAGACAGGGATATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 72 bp | CCGCCGGTCCCGGTTAAAGCCAAGCTGAGGTTTCCATaGCCGCCCATTGCTGGATTTTTCCCAGTCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPVPVKAKLRFP*PPIAGFFPVTR Trigger: CCTGGTGACTGGGAAAAATCCAGCAATGGGCGGCAATGGAAACCTCAGCTTGGCTTTAACCGGGACCGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 90 bp | GTGAACAGGCCGCCGGTCCCGGTTAAAGCCAAGCTGAGGTTTCCATaGCCGCCCATTGCTGGATTTTTCCCAGTCACCAGGTTTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VNRPPVPVKAKLRFP*PPIAGFFPVTRFQN Trigger: GTTCTGAAACCTGGTGACTGGGAAAAATCCAGCAATGGGCGGCAATGGAAACCTCAGCTTGGCTTTAACCGGGACCGGCGGCCTGTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 90 bp | GTCTGGGTGGATAGCCTCCAGGTCCTCCTAGCATCTGGTACTGATTaGGCTGAAAGGCTGCATTTTGGTTTTGGATCATCCGGTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VWVDSLQVLLASGTD*AERLHFGFGSSGSM Trigger: CATGGAACCGGATGATCCAAAACCAAAATGCAGCCTTTCAGCCAAATCAGTACCAGATGCTAGGAGGACCTGGAGGCTATCCACCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 72 bp | AGTAGAGGTTCAGCTCCAACACTTCTCTCAAATCTATaGTGCTGGAAAAGAGGAGGAGGGCCTCGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRGSAPTLLSNL*CWKRGGGPRQE Trigger: TTCCTGGCGAGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAGTGTTGGAGCTGAACCTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | AGAAAACGTCCCTTGAATCCCGTGACACAATTCAGGTaGCACATCAACTGGCTCTGTGGAACCCGTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: RKRPLNPVTQFR*HINWLCGTRLI Trigger: TATCAGACGGGTTCCACAGAGCCAGTTGATGTGCCACCTGAATTGTGTCACGGGATTCAAGGGACGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | CCGCAACATGGGCACAGGGGAACATACTGTTTGGTCTaGAAGAATGGCTTCTTCATCCAAAGAAAACGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQHGHRGTYCLV*KNGFFIQRKRP Trigger: GGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGACCAAACAGTATGTTCCCCTGTGCCCATGTTGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 72 bp | GATAGCCTCCAGGTCCTCCTAGCATCTGGTACTGATTaGGCTGAAAGGCTGCATTTTGGTTTTGGATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: DSLQVLLASGTD*AERLHFGFGSS Trigger: GGATGATCCAAAACCAAAATGCAGCCTTTCAGCCAAATCAGTACCAGATGCTAGGAGGACCTGGAGGCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 90 bp | TGTTTGGTCTGGAAGAATGGCTTCTTCATCCAAAGAAAACGTCCCTaGAATCCCGTGACACAATTCAGGTGGCACATCAACTGGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLVWKNGFFIQRKRP*NPVTQFRWHINWLC Trigger: ACAGAGCCAGTTGATGTGCCACCTGAATTGTGTCACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGACCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 72 bp | CTGGCTCTGTGGAACCCGTCTGATACAGCTCTAAAATaGAGTCGCGTAGTGGATGAAGTTTTCCCACAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LALWNPSDTALK*SRVVDEVFPQT Trigger: TGTTTGTGGGAAAACTTCATCCACTACGCGACTTCATTTTAGAGCTGTATCAGACGGGTTCCACAGAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 72 bp | TCTCCACATCAAATGGGAATGGTAAGCTGGCCATGGTaGGTTCTCTTTCCAGATACTCTCGAAGGACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPHQMGMVSWPW*VLFPDTLEGHS Trigger: TGAATGTCCTTCGAGAGTATCTGGAAAGAGAACTCACCATGGCCAGCTTACCATTCCCATTTGATGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 72 bp | AAGCCACCTTTTGCAAGTATTTCCTCTCTGACTCGCTaGTTCTCAACTGCTGCTTCCATTCCTTCCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KPPFASISSLTR*FSTAASIPSFD Trigger: ATCAAAGGAAGGAATGGAAGCAGCAGTTGAGAAGCAGCGAGTCAGAGAGGAAATACTTGCAAAAGGTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 72 bp | TGGAAGAATGGCTTCTTCATCCAAAGAAAACGTCCCTaGAATCCCGTGACACAATTCAGGTGGCACATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: WKNGFFIQRKRP*NPVTQFRWHIN Trigger: GTTGATGTGCCACCTGAATTGTGTCACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS GCA 72 bp | AAGGACATTCAGCCGAAGGAAGATAAACTCCCCTTCTaGACAAGGAAGACTATCTGCAAGTTCATCATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KDIQPKEDKLPF*TRKTICKFIML Trigger: AAGCATGATGAACTTGCAGATAGTCTTCCTTGTGCAGAAGGGGAGTTTATCTTCCTTCGGCTGAATGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CAA 72 bp | TTAGGTTTACTGGCATCAACTGGAATCTTTACACCGTaGCATTCTTTTGGCTTCTCCTCCACGCAGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLASTGIFTP*HSFGFSSTQLT Trigger: TGTCAACTGCGTGGAGGAGAAGCCAAAAGAATGCAACGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 72 bp | TTCCCTTCTTTTCTCTTGGCAAACCTTCACAATCCTTaGCCTCGTGTCCAAACTGATTACAAAGAGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: FPSFLLANLHNP*PRVQTDYKEHM Trigger: CATGTGCTCTTTGTAATCAGTTTGGACACGAGGTCAAGGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 72 bp | GGCAAACCTTCACAATCCTTGACCTCGTGTCCAAACTaGTTACAAAGAGCACATGGTTTAGGTTTATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GKPSQSLTSCPN*LQRAHGLGLFG Trigger: ACCAAATAAACCTAAACCATGTGCTCTTTGTAATCAGTTTGGACACGAGGTCAAGGATTGTGAAGGTTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | CTCCACATCATTTGGATTAGGTTTACTGGCATCAACTaGAATCTTTACACCGTTGCATTCTTTTGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHIIWIRFTGIN*NLYTVAFFWLL Trigger: GAGAAGCCAAAAGAATGCAACGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | TGCCACCCCATCTATTGCCATGTAGAGAAGTCTTCTTaGTCTTACAATATTGAAAAGTCTGTCAATGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: CHPIYCHVEKSS*SYNIEKSVNVL Trigger: GAGTACATTGACAGACTTTTCAATATTGTAAGACCAAGAAGACTTCTCTACATGGCAATAGATGGGGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS TCA 72 bp | AAATTCAGAGGACATGTCTGCAATACCTTCAAAGTCTaGGGCAAATGGTGCATAATGGAATGGATAATACCA | + |
|
Preference number: 6 (lower is better) Translates to: KFRGHVCNTFKV*GKWCIMEWIIP Trigger: TGGTATTATCCATTCCATTATGCACCATTTGCCTCAGACTTTGAAGGTATTGCAGACATGTCCTCTGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||
| CDS CCA 72 bp | CATATCCAAATACAGATTATCAAACTCCACATCATTTaGATTAGGTTTACTGGCATCAACTGGAATCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: HIQIQIIKLHII*IRFTGINWNLY Trigger: GTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAATCTGTATTTGGATATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028921.6 |
||