Pregenerated sensors for XRCC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026187Ensembl transcript IDs: ENSMUST00000027379.10
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCCAGAGCTGGCACTCTTaGATTCCCCACACATCCATG | + |
Preference number: 2 (lower is better) Translates to: DDVQSFTSPARPQGCCQSQSWHS*IPHTSM Trigger: CATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTG...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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3UTR GCA 72 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATaGTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACT | + |
Preference number: 3 (lower is better) Translates to: VQSFTSPARPQG*CQSSQQHRAGT Trigger: AGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCGGGCCAATGGTCAGTTaGCAGGGCCAGGGCATGGAA | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSGPMVS*QGQGME Trigger: TTCCATGCCCTGGCCCTGCCAACTGACCATTGGCCC...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGAGGGAAGGAGGGTTTaGGGTGGTCCAAGCCAGAGT | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAEGRRV*GGPSQS Trigger: ACTCTGGCTTGGACCACCTCAAACCCTCCTTCCCTC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCAAGGAGGGTTTGAGGTaGTCCAAGCCAGAGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSKEGLR*SKPESR Trigger: CCTGGACTCTGGCTTGGACCACCTCAAACCCTCCTT...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGGCAGGGCCAGGGCATaGAACGCCTCTCAATCTTCT | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAGRARA*NASQSS Trigger: AGAAGATTGAGAGGCGTTCCATGCCCTGGCCCTGCC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGCGGGCCCCTCTTCATaGTTGTCTTGGAAAACGTCC | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAAGPSS*LSWKTS Trigger: GGACGTTTTCCAAGACAATCATGAAGAGGGGCCCGC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCGAAAGGAGTTACCCATaGCAACCCCCACATCCACAC | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSERSYP*QPPHPH Trigger: GTGTGGATGTGGGGGTTGCCATGGGTAACTCCTTTC...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATACAAGTTGGGGCCAATaGTCAGTTGGCAGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHTSWGQ*SVGRAR Trigger: CCTGGCCCTGCCAACTGACCATTGGCCCCAACTTGT...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGTCAGCTGGGCCTCTGTaGGAGTGCACTTCTTATTGT | + |
Preference number: 4 (lower is better) Translates to: VQSFTSPARPQGCCQSSQSAGPL*ECTSYC Trigger: ACAATAAGAAGTGCACTCCCACAGAGGCCCAGCTGA...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGTCAGTAAGTCCTTTTTaGGGGAAGGAGGGTTTGAGG | + |
Preference number: 4 (lower is better) Translates to: VQSFTSPARPQGCCQSSQSVSPF*GKEGLR Trigger: CCTCAAACCCTCCTTCCCTCAAAAAGGACTTACTGA...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATCACTTCCAACCTTGGTaGTGTTCCCTTCTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHHFQPW*CSLLPG Trigger: GCCTGGCAGAAGGGAACATCACCAAGGTTGGAAGTG...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGAAGCGCTGTTCTTCTaGAAACTGAATGGCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAEALFF*KLNGLL Trigger: GAGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATGGAAAGGGCAACAGCTaGCGCCTCATCATCCTTTGC | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHGKGNS*RLIILC Trigger: GCAAAGGATGATGAGGCGGCAGCTGTTGCCCTTTCC...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTTGGAAAACGTCCTaGGCAGTCACTTGGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSSWKTS*AVTWFF Trigger: AAAGAACCAAGTGACTGCTCAGGACGTTTTCCAAGA...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCGGGCCTCTGTGGGAGTaGACTTCTTATTGTTTTTCA | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSGPLWE*TSYCFS Trigger: TGAAAAACAATAAGAAGTGCACTCCCACAGAGGCCC...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTTGCTTTCATCTCAGTaGGGGGATCCAGCATATTCA | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSLLSSQ*GDPAYS Trigger: TGAATATGCTGGATCCCCCCACTGAGATGAAAGCAA...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATCACACTGTGATGTTCTaGTACTGGTCCTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHHTVMF*YWSLPA Trigger: TGCTGGCAAGGACCAGTATCAGAACATCACAGTGTG...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATGGTGTCTGCACACTGTaGTGTTCTGATACTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHGVCTL*CSDTGP Trigger: AGGACCAGTATCAGAACATCACAGTGTGCAGACACC...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACAGCCGCAAGTCTTCCATaGAAGGCAGCTGCACATAAA | + |
Preference number: 4 (lower is better) Translates to: MLPELSAAQSWHSWIPHTAASLP*KAAAHK Trigger: TTTATGTGCAGCTGCCTTTCATGGAAGACTTGCGGC...TGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGACGCAATCTCATCTTTaGTCTCCGAAAATACCTGTC | + |
Preference number: 4 (lower is better) Translates to: VQSFTSPARPQGCCQSSQTQSHL*SPKIPV Trigger: GACAGGTATTTTCGGAGAGCAAAGATGAGATTGCGT...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCGAACTTGATGTCCCATaGAGAATCTTCTATGAACCT | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSELDVP*RIFYEP Trigger: AGGTTCATAGAAGATTCTTCATGGGACATCAAGTTC...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGCACTGGTACAATCGCTaGAATTCAGGATTTGGAATT | + |
Preference number: 4 (lower is better) Translates to: VQSFTSPARPQGCCQSSQHWYNR*NSGFGI Trigger: AATTCCAAATCCTGAATTTCAGCGATTGTACCAGTG...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCAGAGTAACTCCATCCTaGACAACAATTTCCCAGAAA | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSRVTPS*TTISQK Trigger: TTTCTGGGAAATTGTTGTTCAGGATGGAGTTACTCT...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATGCTGAATCAAATCCATaGACACAATCAGGGCGTCCA | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHAESNP*TQSGRP Trigger: TGGACGCCCTGATTGTGTGCATGGATTTGATTCAGC...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCGAGGAAAACATGTATTaGCGCAAGTCTTCCATGAAA | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSEENMY*RKSSMK Trigger: TTTCATGGAAGACTTGCGGCAATACATGTTTTCCTC...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCTTCTGAAAACTGAATaGCCTCCTCCCGGAAAGCTT | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHLLKTE*PPPGKL Trigger: AAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAG...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTAAGGCTACACCAACTTaGGGATTAGATCTTTTGTCA | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAKATPT*GLDLLS Trigger: TGACAAAAGATCTAATCCTCAAGTTGGTGTAGCCTT...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATTATCAGTGCCATCTGTaGCATAGAGGACTAACGCAA | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHYQCHL*HRGLTQ Trigger: TTGCGTTAGTCCTCTATGGCACAGATGGCACTGATA...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCGGATGCCTTCCTTTTaGTGCTCAGTAAGTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHRMPSF*CSVSPF Trigger: AAAAGGACTTACTGAGCAGCAAAAGGAAGGCATCCG...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATTGCTGGGAACTTGGCTaGATTTTGTTTCCGATGTCT | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHCWELG*ILFPMS Trigger: AGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCA...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGCCATTCTTGTCGATTaGAAAAGGCAAAAAGAACTG | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAAILVD*KRQKEL Trigger: CAGTTCTTTTTGCCTTTTCCAATCGACAAGAATGGC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | ATGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACACTTTTGCTTTGTCTTTaGGGGCCAGAAACTTTGTGG | + |
Preference number: 4 (lower is better) Translates to: MLPELSAAQSWHSWIPHTLLLCL*GPETLW Trigger: CCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAG...TGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTAAGACCTTTAGAACTTaGTGTCCCATGAAGAATCTT | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAKTFRT*CPMKNL Trigger: AAGATTCTTCATGGGACATCAAGTTCTAAAGGTCTT...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATCTGGAGATGCTGATGTaGTCTTCTTCTTTCTCAGTT | + |
Preference number: 4 (lower is better) Translates to: ARALSSTELALLDSPHIHLEMLM*SSSFSV Trigger: AACTGAGAAAGAAGAAGATCACATCAGCATCTCCAG...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGAGTCATCACTTTCTTTaGTTGTTCAATTGGAGATTC | + |
Preference number: 4 (lower is better) Translates to: VQSFTSPARPQGCCQSSQSHHFL*LFNWRF Trigger: GAATCTCCAATTGAACAAGCAAAGAAAGTGATGACT...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGTGAACACTTCAATATaGTTCTTCCCAAACTTCTTC | + |
Preference number: 4 (lower is better) Translates to: MTSRASHPLHGLRDAARAVNTSI*FFPNFF Trigger: GAAGAAGTTTGGGAAGAAGCATATTGAAGTGTTCAC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR GCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATAGAACTGCAGAGAGATaGCAGACTTCTTCAAGTTAC | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHRTAER*QTSSSY Trigger: GTAACTTGAAGAAGTCTGGCATCTCTCTGCAGTTCT...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | GATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCCTTTACTTTAGAGAGTaGACTCTCACATTTTGCTTT | + |
Preference number: 4 (lower is better) Translates to: DDVQSFTSPARPQGCCQSLYFRE*TLTFCF Trigger: AAAGCAAAATGTGAGAGTCCACTCTCTAAAGTAAAG...GCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR TCA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATGTCGTAGACTCTCACTaGAGGAATAAATTTCATCCA | + |
Preference number: 4 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHVVDSH*RNKFHP Trigger: TGGATGAAATTTATTCCTTCAGTGAGAGTCTACGAC...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CCA 90 bp | ATGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACACTTTGCTTGTTCAATTaGAGATTCTTCACCAGGAAA | + |
Preference number: 4 (lower is better) Translates to: MLPELSAAQSWHSWIPHTLCLFN*RFFTRK Trigger: TTTCCTGGTGAAGAATCTCCAATTGAACAAGCAAAG...TGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGGGGGCCAATGGTCAGTaGGCAGGGCCAGGGCATGGA | + |
Preference number: 5 (lower is better) Translates to: VQSFTSPARPQGCCQSSQGANGQ*AGPGHG Trigger: TCCATGCCCTGGCCCTGCCAACTGACCATTGGCCCC...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTAGGACAGCATCACCCTaGTCACCATGCGGATGCCTT | + |
Preference number: 5 (lower is better) Translates to: MTSRASHPLHGLRDAARARTASP*SPCGCL Trigger: AAGGCATCCGCATGGTGACAAGGGTGATGCTGTCCT...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCGGCTTGCTGGGAACTaGGCTGGATTTTGTTTCCGA | + |
Preference number: 5 (lower is better) Translates to: MTSRASHPLHGLRDAARARLAGN*AGFCFR Trigger: TCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCG...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | ATGACGTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTGCTTCCAGGAAGCTGTaGAAGCGCTGTTCTTCTGAA | + |
Preference number: 5 (lower is better) Translates to: MTSRASHPLHGLRDAARAASRKL*KRCSSE Trigger: TTCAGAAGAACAGCGCTTCAACAGCTTCCTGGAAGC...AGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGACGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGATCTTTATAGACAAGTaGGGGCCAATGGTCAGTTGG | + |
Preference number: 5 (lower is better) Translates to: VQSFTSPARPQGCCQSSQIFIDK*GPMVSW Trigger: CCAACTGACCATTGGCCCCAACTTGTCTATAAAGAT...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGTCTTTTGCTTTGTCTTaGGGGGCCAGAAACTTTGTG | + |
Preference number: 5 (lower is better) Translates to: VQSFTSPARPQGCCQSSQSFALS*GARNFV Trigger: CACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGA...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GTCCAGAGCTTCACATCCCCTGCACGGCCTCAGGGATGCTGCCAGAGCTCTCAGGTATCTTCTTTTGCTTaGTCTTTGGGGGCCAGAAAC | + |
Preference number: 5 (lower is better) Translates to: VQSFTSPARPQGCCQSSQVSSFA*SLGARN Trigger: GTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATAC...CTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGGGGATGTGAAGCTCTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATGCGGATGCCTTCCTTTaGCTGCTCAGTAAGTCCTTT | + |
Preference number: 5 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHADAFL*LLSKSF Trigger: AAAGGACTTACTGAGCAGCAAAAGGAAGGCATCCGC...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCTCAGTAAGTCCTTTTaGAGGGAAGGAGGGTTTGAG | + |
Preference number: 5 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHLSKSF*REGGFE Trigger: CTCAAACCCTCCTTCCCTCAAAAAGGACTTACTGAG...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCGTTGTATCTTCTTTaGCTTTGTCTTTGGGGGCCA | + |
Preference number: 5 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHPLYLL*LCLWGP Trigger: TGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGG...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | GGGGGCCAGAAACTTTGTGGCTTCCTCAGCTGTGATAGAGCTTCCTaGGCCTTCGTCTTTGGTGATCAGAGTAACTCCATCCTGAACAAC | + |
Preference number: 5 (lower is better) Translates to: GGQKLCGFLSCDRAS*AFVFGDQSNSILNN Trigger: GTTGTTCAGGATGGAGTTACTCTGATCACCAAAGACGAAGGCCCAGGAAGCTCTATCACAGCTGAGGAAGCCACAAAGTTTCTGGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCGAGGAAAACATGTATaGCCGCAAGTCTTCCATGAA | + |
Preference number: 5 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHRGKHV*PQVFHE Trigger: TTCATGGAAGACTTGCGGCAATACATGTTTTCCTCG...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATCTCTTCATGATTGTCTaGGAAAACGTCCTGAGCAGT | + |
Preference number: 5 (lower is better) Translates to: ARALSSTELALLDSPHIHLFMIV*ENVLSS Trigger: ACTGCTCAGGACGTTTTCCAAGACAATCATGAAGAG...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | TGCTGCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATACTTGGTTCTTTTTCTaGATGACTTCTGTGAGAGGG | + |
Preference number: 5 (lower is better) Translates to: CCQSSQQHRAGTLGFPTHTWFFF*MTSVRG Trigger: CCCTCTCACAGAAGTCATCAAGAAAAAGAACCAAGT...ATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 90 bp | CGAAGGGCTTCCAGGAAGCTGTTGAAGCGCTGTTCTTCTGAAAACTaGATGGCCTCCTCCCGGAAAGCTTTGATGCAGTCCATACTTTTC | + |
Preference number: 5 (lower is better) Translates to: RRASRKLLKRCSSEN*MASSRKALMQSILF Trigger: GAAAAGTATGGACTGCATCAAAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTCAACAGCTTCCTGGAAGCCCTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 90 bp | TTTCTCTCGAAGGGCTTCCAGGAAGCTGTTGAAGCGCTGTTCTTCTaGAAACTGAATGGCCTCCTCCCGGAAAGCTTTGATGCAGTCCAT | + |
Preference number: 5 (lower is better) Translates to: FLSKGFQEAVEALFF*KLNGLLPESFDAVH Trigger: ATGGACTGCATCAAAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTCAACAGCTTCCTGGAAGCCCTTCGAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS GCA 90 bp | TCTTCCCAAACTTCTTCCCTATGGTTTCACGCTGAATCAAATCCATaGACACAATCAGGGCGTCCAGGAAGTCGGCTTGCTGGGAACTTG | + |
Preference number: 5 (lower is better) Translates to: SSQTSSLWFHAESNP*TQSGRPGSRLAGNL Trigger: CAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTTGATTCAGCGTGAAACCATAGGGAAGAAGTTTGGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS-3UTR CAA 90 bp | GCCAGAGCTCTCAGCAGCACAGAGCTGGCACTCTTGGATTCCCCACACATCCATTCTTTGCTTGTTCAATaGGAGATTCTTCACCAGGAA | + |
Preference number: 5 (lower is better) Translates to: ARALSSTELALLDSPHIHSLLVQ*EILHQE Trigger: TTCCTGGTGAAGAATCTCCAATTGAACAAGCAAAGA...ATGGATGTGTGGGGAATCCAAGAGTGCCAGCTCTGTGCTGCTGAGAGCTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | ATCAAATCCATGCACACAATCAGGGCGTCCAGGAAGTCGGCTTGCTaGGAACTTGGCTGGATTTTGTTTCCGATGTCTTCCAGCAAATCA | + |
Preference number: 5 (lower is better) Translates to: IKSMHTIRASRKSAC*ELGWILFPMSSSKS Trigger: TGATTTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 90 bp | CTTCCAGCAAATCAAAATCTGGTAGCATCAGGTGTCTGCACACTGTaGTGTTCTGATACTGGTCCTTGCCAGCAAGGGCATTATCAGTGC | + |
Preference number: 5 (lower is better) Translates to: LPANQNLVASGVCTL*CSDTGPCQQGHYQC Trigger: GCACTGATAATGCCCTTGCTGGCAAGGACCAGTATCAGAACATCACAGTGTGCAGACACCTGATGCTACCAGATTTTGATTTGCTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | TTGCTTGTTCAATTGGAGATTCTTCACCAGGAAAGGAGTTACCCATaGCAACCCCCACATCCACACACAGCACAACAGCTGCCTTATTAC | + |
Preference number: 5 (lower is better) Translates to: LLVQLEILHQERSYP*QPPHPHTAQQLPYY Trigger: GTAATAAGGCAGCTGTTGTGCTGTGTGTGGATGTGGGGGTTGCCATGGGTAACTCCTTTCCTGGTGAAGAATCTCCAATTGAACAAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS GCA 90 bp | TCTGATACTGGTCCTTGCCAGCAAGGGCATTATCAGTGCCATCTGTaGCATAGAGGACTAACGCAATCTCATCTTTGCTCTCCGAAAATA | + |
Preference number: 5 (lower is better) Translates to: SDTGPCQQGHYQCHL*HRGLTQSHLCSPKI Trigger: TATTTTCGGAGAGCAAAGATGAGATTGCGTTAGTCCTCTATGGCACAGATGGCACTGATAATGCCCTTGCTGGCAAGGACCAGTATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | CTGTCGTTGGACAAACATAGTCATCACTTTCTTTGCTTGTTCAATTaGAGATTCTTCACCAGGAAAGGAGTTACCCATGGCAACCCCCAC | + |
Preference number: 5 (lower is better) Translates to: LSLDKHSHHFLCLFN*RFFTRKGVTHGNPH Trigger: GTGGGGGTTGCCATGGGTAACTCCTTTCCTGGTGAAGAATCTCCAATTGAACAAGCAAAGAAAGTGATGACTATGTTTGTCCAACGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | ATGCCAGACTTCTTCAAGTTACAAATTATAACGTCCAGTTGGTCCTaGCTGAACGGGCTGCTGAGGTCAGTGAACACTTCAATATGCTTC | + |
Preference number: 5 (lower is better) Translates to: MPDFFKLQIITSSWS*LNGLLRSVNTSICF Trigger: GAAGCATATTGAAGTGTTCACTGACCTCAGCAGCCCGTTCAGCCAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAAGTCTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | AGAGAGATGCCAGACTTCTTCAAGTTACAAATTATAACGTCCAGTTaGTCCTGGCTGAACGGGCTGCTGAGGTCAGTGAACACTTCAATA | + |
Preference number: 5 (lower is better) Translates to: REMPDFFKLQIITSS*SWLNGLLRSVNTSI Trigger: TATTGAAGTGTTCACTGACCTCAGCAGCCCGTTCAGCCAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAAGTCTGGCATCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | TTTACCAAGCTCATGGAATCAATCAGATCATCAATAGCGCTCAGCTaGGCCTCTGTGGGAGTGCACTTCTTATTGTTTTTCAGCGAGGAA | + |
Preference number: 5 (lower is better) Translates to: FTKLMESIRSSIALS*ASVGVHFLLFFSEE Trigger: TTCCTCGCTGAAAAACAATAAGAAGTGCACTCCCACAGAGGCCCAGCTGAGCGCTATTGATGATCTGATTGATTCCATGAGCTTGGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 90 bp | ATTGTTCGATGTGACTTATTAACTGGAGACTCGCTTCCTCAAAGCTaGCAATCTTCTGTCTTACTAGGAAACGGAAGTTTTCAACAGGAT | + |
Preference number: 5 (lower is better) Translates to: IVRCDLLTGDSLPQS*QSSVLLGNGSFQQD Trigger: ATCCTGTTGAAAACTTCCGTTTCCTAGTAAGACAGAAGATTGCCAGCTTTGAGGAAGCGAGTCTCCAGTTAATAAGTCACATCGAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | ATGCACACAATCAGGGCGTCCAGGAAGTCGGCTTGCTaGGAACTTGGCTGGATTTTGTTTCCGATGTCTTCC | + |
Preference number: 6 (lower is better) Translates to: MHTIRASRKSAC*ELGWILFPMSS Trigger: GGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | ATCCATGCACACAATCAGGGCGTCCAGGAAGTCGGCTaGCTGGGAACTTGGCTGGATTTTGTTTCCGATGTC | + |
Preference number: 6 (lower is better) Translates to: IHAHNQGVQEVG*LGTWLDFVSDV Trigger: GACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | TCCAGGAAGCTGTTGAAGCGCTGTTCTTCTGAAAACTaGATGGCCTCCTCCCGGAAAGCTTTGATGCAGTCC | + |
Preference number: 6 (lower is better) Translates to: SRKLLKRCSSEN*MASSRKALMQS Trigger: GGACTGCATCAAAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTCAACAGCTTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | AATCAGGGCGTCCAGGAAGTCGGCTTGCTGGGAACTTaGCTGGATTTTGTTTCCGATGTCTTCCAGCAAATC | + |
Preference number: 6 (lower is better) Translates to: NQGVQEVGLLGT*LDFVSDVFQQI Trigger: GATTTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | ACAATCTTTATAGACAAGTTGGGGCCAATGGTCAGTTaGCAGGGCCAGGGCATGGAACGCCTCTCAATCTTC | + |
Preference number: 6 (lower is better) Translates to: TIFIDKLGPMVS*QGQGMERLSIF Trigger: GAAGATTGAGAGGCGTTCCATGCCCTGGCCCTGCCAACTGACCATTGGCCCCAACTTGTCTATAAAGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | CAATCAGGGCGTCCAGGAAGTCGGCTTGCTGGGAACTaGGCTGGATTTTGTTTCCGATGTCTTCCAGCAAAT | + |
Preference number: 6 (lower is better) Translates to: QSGRPGSRLAGN*AGFCFRCLPAN Trigger: ATTTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | GCGCTCAGCTGGGCCTCTGTGGGAGTGCACTTCTTATaGTTTTTCAGCGAGGAAAACATGTATTGCCGCAAG | + |
Preference number: 6 (lower is better) Translates to: ALSWASVGVHFL*FFSEENMYCRK Trigger: CTTGCGGCAATACATGTTTTCCTCGCTGAAAAACAATAAGAAGTGCACTCCCACAGAGGCCCAGCTGAGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | ATCAGGGCGTCCAGGAAGTCGGCTTGCTGGGAACTTGGCTGGATTTaGTTTCCGATGTCTTCCAGCAAATCAAAATCTGGTAGCATCAGG | + |
Preference number: 6 (lower is better) Translates to: IRASRKSACWELGWI*FPMSSSKSKSGSIR Trigger: CCTGATGCTACCAGATTTTGATTTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | CTGAATCAAATCCATGCACACAATCAGGGCGTCCAGGAAGTCGGCTaGCTGGGAACTTGGCTGGATTTTGTTTCCGATGTCTTCCAGCAA | + |
Preference number: 6 (lower is better) Translates to: LNQIHAHNQGVQEVG*LGTWLDFVSDVFQQ Trigger: TTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTTGATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | AAGGGCTTCCAGGAAGCTGTTGAAGCGCTGTTCTTCTaGAAACTGAATGGCCTCCTCCCGGAAAGCTTTGAT | + |
Preference number: 6 (lower is better) Translates to: KGFQEAVEALFF*KLNGLLPESFD Trigger: ATCAAAGCTTTCCGGGAGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTCAACAGCTTCCTGGAAGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS GCA 72 bp | GGTCCTTGCCAGCAAGGGCATTATCAGTGCCATCTGTaGCATAGAGGACTAACGCAATCTCATCTTTGCTCT | + |
Preference number: 6 (lower is better) Translates to: GPCQQGHYQCHL*HRGLTQSHLCS Trigger: AGAGCAAAGATGAGATTGCGTTAGTCCTCTATGGCACAGATGGCACTGATAATGCCCTTGCTGGCAAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS GCA 72 bp | ACTTCTTCCCTATGGTTTCACGCTGAATCAAATCCATaGACACAATCAGGGCGTCCAGGAAGTCGGCTTGCT | + |
Preference number: 6 (lower is better) Translates to: TSSLWFHAESNP*TQSGRPGSRLA Trigger: AGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTTGATTCAGCGTGAAACCATAGGGAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | TACAATCTTTATAGACAAGTTGGGGCCAATGGTCAGTaGGCAGGGCCAGGGCATGGAACGCCTCTCAATCTT | + |
Preference number: 6 (lower is better) Translates to: YNLYRQVGANGQ*AGPGHGTPLNL Trigger: AAGATTGAGAGGCGTTCCATGCCCTGGCCCTGCCAACTGACCATTGGCCCCAACTTGTCTATAAAGATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | TTTCCACTTTCTCTCGAAGGGCTTCCAGGAAGCTGTTaGAGCGCTGTTCTTCTGAAAACTGAATGGCCTCCT | + |
Preference number: 6 (lower is better) Translates to: FPLSLEGLPGSC*SAVLLKTEWPP Trigger: AGGAGGCCATTCAGTTTTCAGAAGAACAGCGCTTCAACAGCTTCCTGGAAGCCCTTCGAGAGAAAGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | CCAGACTTCTTCAAGTTACAAATTATAACGTCCAGTTaGTCCTGGCTGAACGGGCTGCTGAGGTCAGTGAAC | + |
Preference number: 6 (lower is better) Translates to: PDFFKLQIITSS*SWLNGLLRSVN Trigger: GTTCACTGACCTCAGCAGCCCGTTCAGCCAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAAGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | AAACTTTGTGGCTTCCTCAGCTGTGATAGAGCTTCCTaGGCCTTCGTCTTTGGTGATCAGAGTAACTCCATC | + |
Preference number: 6 (lower is better) Translates to: KLCGFLSCDRAS*AFVFGDQSNSI Trigger: GATGGAGTTACTCTGATCACCAAAGACGAAGGCCCAGGAAGCTCTATCACAGCTGAGGAAGCCACAAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | AAACGGAAGTTTTCAACAGGATTCACACTTCCAACCTaGGTGATGTTCCCTTCTGCCAGGCTGGAGATGCTG | + |
Preference number: 6 (lower is better) Translates to: KRKFSTGFTLPT*VMFPSARLEML Trigger: CAGCATCTCCAGCCTGGCAGAAGGGAACATCACCAAGGTTGGAAGTGTGAATCCTGTTGAAAACTTCCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | TCTTCAGGTCCCGTTGTATCTTCTTTTGCTTTGTCTTaGGGGGCCAGAAACTTTGTGGCTTCCTCAGCTGTG | + |
Preference number: 6 (lower is better) Translates to: SSGPVVSSFALS*GARNFVASSAV Trigger: CACAGCTGAGGAAGCCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | TCATCAATAGCGCTCAGCTGGGCCTCTGTGGGAGTGCACTTCTTATaGTTTTTCAGCGAGGAAAACATGTATTGCCGCAAGTCTTCCATG | + |
Preference number: 6 (lower is better) Translates to: SSIALSWASVGVHFL*FFSEENMYCRKSSM Trigger: CATGGAAGACTTGCGGCAATACATGTTTTCCTCGCTGAAAAACAATAAGAAGTGCACTCCCACAGAGGCCCAGCTGAGCGCTATTGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | TCCACATCACCAGCTTCTTCAGGTCCCGTTGTATCTTCTTTTGCTTaGTCTTTGGGGGCCAGAAACTTTGTGGCTTCCTCAGCTGTGATA | + |
Preference number: 6 (lower is better) Translates to: STSPASSGPVVSSFA*SLGARNFVASSAVI Trigger: TATCACAGCTGAGGAAGCCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTGATGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | AATCATCCACATCACCAGCTTCTTCAGGTCCCGTTGTATCTTCTTTaGCTTTGTCTTTGGGGGCCAGAAACTTTGTGGCTTCCTCAGCTG | + |
Preference number: 6 (lower is better) Translates to: NHPHHQLLQVPLYLL*LCLWGPETLWLPQL Trigger: CAGCTGAGGAAGCCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTGATGTGGATGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | TTTATAGGCTACAATCTTTATAGACAAGTTGGGGCCAATGGTCAGTaGGCAGGGCCAGGGCATGGAACGCCTCTCAATCTTCTTAAAGAC | + |
Preference number: 6 (lower is better) Translates to: FIGYNLYRQVGANGQ*AGPGHGTPLNLLKD Trigger: GTCTTTAAGAAGATTGAGAGGCGTTCCATGCCCTGGCCCTGCCAACTGACCATTGGCCCCAACTTGTCTATAAAGATTGTAGCCTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | AATCAAAATCTGGTAGCATCAGGTGTCTGCACACTGTaGTGTTCTGATACTGGTCCTTGCCAGCAAGGGCAT | + |
Preference number: 6 (lower is better) Translates to: NQNLVASGVCTL*CSDTGPCQQGH Trigger: ATGCCCTTGCTGGCAAGGACCAGTATCAGAACATCACAGTGTGCAGACACCTGATGCTACCAGATTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS GCA 72 bp | AGGATTCACACTTCCAACCTTGGTGATGTTCCCTTCTaGCAGGCTGGAGATGCTGATGTGATCTTCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: RIHTSNLGDVPF*QAGDADVIFFF Trigger: AAAGAAGAAGATCACATCAGCATCTCCAGCCTGGCAGAAGGGAACATCACCAAGGTTGGAAGTGTGAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | TCCAGGAAGTCGGCTTGCTGGGAACTTGGCTGGATTTaGTTTCCGATGTCTTCCAGCAAATCAAAATCTGGT | + |
Preference number: 6 (lower is better) Translates to: SRKSACWELGWI*FPMSSSKSKSG Trigger: ACCAGATTTTGATTTGCTGGAAGACATCGGAAACAAAATCCAGCCAAGTTCCCAGCAAGCCGACTTCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | CATCACCAGCTTCTTCAGGTCCCGTTGTATCTTCTTTaGCTTTGTCTTTGGGGGCCAGAAACTTTGTGGCTT | + |
Preference number: 6 (lower is better) Translates to: HHQLLQVPLYLL*LCLWGPETLWL Trigger: AAGCCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | TCATGTCCAGTAAATCATCCACATCACCAGCTTCTTCAGGTCCCGTaGTATCTTCTTTTGCTTTGTCTTTGGGGGCCAGAAACTTTGTGG | + |
Preference number: 6 (lower is better) Translates to: SCPVNHPHHQLLQVP*YLLLLCLWGPETLW Trigger: CCACAAAGTTTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTGATGTGGATGATTTACTGGACATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | TTCTTCAAGTTACAAATTATAACGTCCAGTTGGTCCTaGCTGAACGGGCTGCTGAGGTCAGTGAACACTTCA | + |
Preference number: 6 (lower is better) Translates to: FFKLQIITSSWS*LNGLLRSVNTS Trigger: TGAAGTGTTCACTGACCTCAGCAGCCCGTTCAGCCAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | CTCATGGAATCAATCAGATCATCAATAGCGCTCAGCTaGGCCTCTGTGGGAGTGCACTTCTTATTGTTTTTC | + |
Preference number: 6 (lower is better) Translates to: LMESIRSSIALS*ASVGVHFLLFF Trigger: GAAAAACAATAAGAAGTGCACTCCCACAGAGGCCCAGCTGAGCGCTATTGATGATCTGATTGATTCCATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | GTAAATCATCCACATCACCAGCTTCTTCAGGTCCCGTaGTATCTTCTTTTGCTTTGTCTTTGGGGGCCAGAA | + |
Preference number: 6 (lower is better) Translates to: VNHPHHQLLQVP*YLLLLCLWGPE Trigger: TTCTGGCCCCCAAAGACAAAGCAAAAGAAGATACAACGGGACCTGAAGAAGCTGGTGATGTGGATGATTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | TCAGCGAGGAAAACATGTATTGCCGCAAGTCTTCCATaGAAGGCAGCTGCACATAAACTAAACACTCATAGG | + |
Preference number: 6 (lower is better) Translates to: SARKTCIAASLP*KAAAHKLNTHR Trigger: CCTATGAGTGTTTAGTTTATGTGCAGCTGCCTTTCATGGAAGACTTGCGGCAATACATGTTTTCCTCGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS TCA 72 bp | TGTAAGGCTCTATGCAGCAGACACTGGTACAATCGCTaGAATTCAGGATTTGGAATTTTGGAGGTTGGAAAC | + |
Preference number: 6 (lower is better) Translates to: CKALCSRHWYNR*NSGFGILEVGN Trigger: GTTTCCAACCTCCAAAATTCCAAATCCTGAATTTCAGCGATTGTACCAGTGTCTGCTGCATAGAGCCTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | TGTGACTTATTAACTGGAGACTCGCTTCCTCAAAGCTaGCAATCTTCTGTCTTACTAGGAAACGGAAGTTTT | + |
Preference number: 6 (lower is better) Translates to: CDLLTGDSLPQS*QSSVLLGNGSF Trigger: AAAACTTCCGTTTCCTAGTAAGACAGAAGATTGCCAGCTTTGAGGAAGCGAGTCTCCAGTTAATAAGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | ATAGGCGTCCTTAATGTAAGGGAAGGCTACACCAACTaGAGGATTAGATCTTTTGTCATAAGCATATCGGAC | + |
Preference number: 6 (lower is better) Translates to: IGVLNVREGYTN*RIRSFVISISD Trigger: GTCCGATATGCTTATGACAAAAGATCTAATCCTCAAGTTGGTGTAGCCTTCCCTTACATTAAGGACGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | TTCATGATTGTCTTGGAAAACGTCCTGAGCAGTCACTaGGTTCTTTTTCTTGATGACTTCTGTGAGAGGGAA | + |
Preference number: 6 (lower is better) Translates to: FMIVLENVLSSH*VLFLDDFCERE Trigger: TTCCCTCTCACAGAAGTCATCAAGAAAAAGAACCAAGTGACTGCTCAGGACGTTTTCCAAGACAATCATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CCA 72 bp | GCAATCTCATCTTTGCTCTCCGAAAATACCTGTCGTTaGACAAACATAGTCATCACTTTCTTTGCTTGTTCA | + |
Preference number: 6 (lower is better) Translates to: AISSLLSENTCR*TNIVITFFACS Trigger: TGAACAAGCAAAGAAAGTGATGACTATGTTTGTCCAACGACAGGTATTTTCGGAGAGCAAAGATGAGATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 90 bp | GACACTGGTACAATCGCTGAAATTCAGGATTTGGAATTTTGGAGGTaGGAAACAAATCTTCAACAATGTCTTCTTCCTCGTTTTTCTTTA | + |
Preference number: 6 (lower is better) Translates to: DTGTIAEIQDLEFWR*ETNLQQCLLPRFSL Trigger: TAAAGAAAAACGAGGAAGAAGACATTGTTGAAGATTTGTTTCCAACCTCCAAAATTCCAAATCCTGAATTTCAGCGATTGTACCAGTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |
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CDS CAA 72 bp | AACAGAGAAGCACTTCCCCTCAGATTTATATTTCATTaGTTCCTCATCCACTTTAGAAAAAGGAATGATATC | + |
Preference number: 6 (lower is better) Translates to: NREALPLRFIFH*FLIHFRKRNDI Trigger: GATATCATTCCTTTTTCTAAAGTGGATGAGGAACAAATGAAATATAAATCTGAGGGGAAGTGCTTCTCTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027379.10 |