Pregenerated sensors for XRCC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021287Ensembl transcript IDs: ENSMUST00000021715.6, ENSMUST00000127281.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTTCCAGCCTGGATGCACCGCCCAGCCGAGTTGCCAGGAACACCTaGCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PSSLDAPPSRVARNT*QALVSTHTCFRVSL Trigger: AAGGGACACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR CCA 90 bp | CCTACCTGCTGGCTGAGTGTGTACACAGTCCTGTTGGGTGCTTTGTaGTGCCTTCCAGCCTGGATGCACCGCCCAGCCGAGTTGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PTCWLSVYTVLLGAL*CLPAWMHRPAELPG Trigger: TCCTGGCAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTGTGTACACACTCAGCCAGCAGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR GCA 90 bp | CTCCTTGGTGAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTaGTACCTGTGCGTCAACACACAGCCCTGTCTACAGAGGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: LLGEGPLGTLAGGSL*YLCVNTQPCLQRPH Trigger: GTGTGGCCTCTGTAGACAGGGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR CCA 90 bp | GAGAGGCGCTCTTCTGAAGCCCCTAGTGACCTGGACACAGACTGCTaGTCCTCCACCATGTCTGTCACCTGGTTGATGCACAGCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: ERRSSEAPSDLDTDC*SSTMSVTWLMHSTG Trigger: CCCAGTGCTGTGCATCAACCAGGTGACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTTCAGAAGAGCGCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR CCA 90 bp | ACATCGTCCTCATGGGTGCGGTCAACCATCAGTCGCATCAGGAGCTaGTTAGCCCAGGTGATGCCAAGGGCTGGAGAGAGGCGCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TSSSWVRSTISRIRS*LAQVMPRAGERRSS Trigger: AGAAGAGCGCCTCTCTCCAGCCCTTGGCATCACCTGGGCTAACCAGCTCCTGATGCGACTGATGGTTGACCGCACCCATGAGGACGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR CCA 90 bp | GTCCGAACTGGGCTTCTGGGCAAGCCTGTGGTAACATCGTCCTCATaGGTGCGGTCAACCATCAGTCGCATCAGGAGCTGGTTAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VRTGLLGKPVVTSSS*VRSTISRIRSWLAQ Trigger: CTGGGCTAACCAGCTCCTGATGCGACTGATGGTTGACCGCACCCATGAGGACGATGTTACCACAGGCTTGCCCAGAAGCCCAGTTCGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR GCA 90 bp | GAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTaGGTCAACACACAGCCCTGTCTACAGAGGCCACACCCATTGCTT | + |
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Preference number: 1 (lower is better) Translates to: EGPLGTLAGGSLCYL*VNTQPCLQRPHPLL Trigger: AAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR GCA 90 bp | GGAGAGAGGCGCTCTTCTGAAGCCCCTAGTGACCTGGACACAGACTaGTGGTCCTCCACCATGTCTGTCACCTGGTTGATGCACAGCACT | + |
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Preference number: 1 (lower is better) Translates to: GERRSSEAPSDLDTD*WSSTMSVTWLMHST Trigger: AGTGCTGTGCATCAACCAGGTGACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTTCAGAAGAGCGCCTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR TCA 90 bp | CACCAAGCTGCTGAGTCCCAGGCAGAAAGCAGAAGAGAGAAGAGCTaGGTCTTGTCATTTTGGGGTCCTACGGAGACGCCCTCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HQAAESQAESRREKS*VLSFWGPTETPSGL Trigger: CAGCCCAGAGGGCGTCTCCGTAGGACCCCAAAATGACAAGACTCAGCTCTTCTCTCTTCTGCTTTCTGCCTGGGACTCAGCAGCTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR GCA 90 bp | CTTAGTGAGCACACACACCTGTTTCCGGGTGTCCCTTTCATAAGTTaGCCAAAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LSEHTHLFPGVPFIS*PKPLSLDSWVGPGP Trigger: TGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGGGCAACTTATGAAAGGGACACCCGGAAACAGGTGTGTGTGCTCACTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR GCA 90 bp | GGTGTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCTaGTGGCTGAGTGTGTACACAGTCCTGTTGGGTGCTTTGTGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: GVDSESRAHVTRRPT*WLSVYTVLLGALWC Trigger: GCACCACAAAGCACCCAACAGGACTGTGTACACACTCAGCCAGCAGGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR CCA 90 bp | GGTGTCCCTTTCATAAGTTGCCCAAAGCCACTTAGCCTAGACAGCTaGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAGTTTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: GVPFISCPKPLSLDS*VGPGPSLFLGQFSP Trigger: TGGAGAAAACTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGGGCAACTTATGAAAGGGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR TCA 90 bp | CAACACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTaGGCCTCAAGTCCACAAGGTGTTGATTCTGAGTCCAGAGCACAT | + |
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Preference number: 1 (lower is better) Translates to: QHTALSTEATPIAYC*ASSPQGVDSESRAH Trigger: ATGTGCTCTGGACTCAGAATCAACACCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR TCA 90 bp | ACTGACAGACTAACCGTCACTGGGTGCCTGTTCACCAGGTGCCACTaGCTGACAGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: TDRLTVTGCLFTRCH*LTGCWKESSESGFL Trigger: AAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGGTGAACAGGCACCCAGTGACGGTTAGTCTGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCCGGCCCCACCAAGCTGCTaGGTCCCAGGCAGAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSCWVLCGAFQPGCTAQPAPPSC*VPGRKQ Trigger: CTGCTTTCTGCCTGGGACTCAGCAGCTTGGTGGGGC...CGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACGGGTCAGAGGAGAGGGGTAGGTaGGGGGCGAAGAGCACTCGG | + |
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Preference number: 2 (lower is better) Translates to: TPPKQLCVPSSSALRHGSEERGR*GAKSTR Trigger: CCGAGTGCTCTTCGCCCCCCACCTACCCCTCTCCTC...TGACCCGTGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCGCCCCACCAAGCTGCTaGGTCCCAGGCAGAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HLAHLLVGACATCASTHSAPPSC*VPGRKQ Trigger: CTGCTTTCTGCCTGGGACTCAGCAGCTTGGTGGGGC...GCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACGGGGTTGCCAGGAACACCTaGCAGGCCTTAGTGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: TTPPKQLCVPSSSALRHGVARNT*QALVST Trigger: TGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAAC...CCCGTGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | CAACAGGACTCCTTGGTGAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTACCGCCCAGCCGAGTTaGCAGGAACACCTGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QQDSLVKVHLAHLLVGACTAQPS*QEHLPG Trigger: GCCTGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGT...ACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | GAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTGTCCCTTTCACCGCCCAGCCGAGTTaGCAGGAACACCTGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EHLPGLSEHTHLFPGVPFTAQPS*QEHLPG Trigger: GCCTGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGT...GAAAGGGACACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACGGGTCACTTAGCCTAGACAGCTaGGTTGGGCCTGGCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: TPPKQLCVPSSSALRHGSLSLDS*VGPGPS Trigger: AGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAG...TGACCCGTGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGAGTTAAGACCATCCTaGAGGAGGGTAGGCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: PKPLSLDSWVGPGPSLFLELRPS*RRVGPT Trigger: GGTGGGGCCTACCCTCCTGCAGGATGGTCTTAACTC...GAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCGAGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTAATGGTGTATATGTGTaGGGAGGAGCCCAGTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSRVARNTCQALVSTHTCNGVYV*GGAQSG Trigger: CCCCGACTGGGCTCCTCCCCACACATATACACCATT...ACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACTCGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCCCTGAAGCCCCTAGTGACCTaGACACAGACTGCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: WHTCWWEPVLPVRQHTALKPLVT*TQTAGP Trigger: AGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTT...CAGGGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACCAGGTGCCACTGACTaGCAGGTTGTTGGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VNHPTQAAVCPLILSSQAPGATD*QVVGKS Trigger: ACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGG...TGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | AGACCATCCTGCAGGAGGGTAGGCCCCACCAAGCTGCTGAGTCCCAGGCAGAAAGGAGAGAGCAGATACTaGCAGACTAACCGTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RPSCRRVGPTKLLSPRQKGESRY*QTNRHW Trigger: CCAGTGACGGTTAGTCTGTCAGTATCTGCTCTCTCC...TTTCTGCCTGGGACTCAGCAGCTTGGTGGGGCCTACCCTCCTGCAGGATGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAGGACTCCTTGGTGAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTCCTCTAATGGGTAGGTaGACCCCAGGGAGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: QQDSLVKVHLAHLLVGACPLMGR*TPGRRE Trigger: CTCTCTCCTCCCTGGGGTTCACCTACCCATTAGAGG...ACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCAAGCCCCAGGGGCCTTTaGAACGATGAGCTCATAAGA | + |
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Preference number: 2 (lower is better) Translates to: VNHPTQAAVCPLILSSQASPRGL*NDELIR Trigger: TCTTATGAGCTCATCGTTTCAAAGGCCCCTGGGGCT...TGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCCACAAGGTGTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCGCCTTCCAGCCTGGATaGACCGCCCAGCCGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SPQGVDSESRAHVTRRPTAFQPG*TAQPSC Trigger: GCAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGC...GGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAACACCTTGTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCGCCCTAGGTTTAGTCTaGAGGATTGCCACAGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: HLAHLLVGACATCASTHSALGLV*RIATAG Trigger: ACCCGCTGTGGCAATCCTGCAGACTAAACCTAGGGC...GCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCCAGACTAACCGTCACTaGGTGCCTGTTCACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HLAHLLVGACATCASTHSQTNRH*VPVHQV Trigger: CACCTGGTGAACAGGCACCCAGTGACGGTTAGTCTG...GCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCTGCTGGCTGAGTTACGGAGACGCCCTCTaGGCTGCCAGAGCTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VDSESRAHVTRRPTCWLSYGDAL*AARAPA Trigger: AGCAGGAGCTCTGGCAGCCCAGAGGGCGTCTCCGTA...ACTCAGCCAGCAGGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCCCTCATCCTCAGCTCTCAGGCACGGGTCAGTGGGTCATAGCTCAGTGTAATGGTGTATATGTGTaGGGAGGAGCCCAGTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: VSPHPQLSGTGQWVIAQCNGVYV*GGAQSG Trigger: CCCCGACTGGGCTCCTCCCCACACATATACACCATT...ACACTGAGCTATGACCCACTGACCCGTGCCTGAGAGCTGAGGATGAGGGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTCCTAGACAGCTGGGTTaGGCCTGGCCCATCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SCQEHLPGLSEHTHLFPGPRQLG*AWPISL Trigger: AAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGG...ACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACCATCCTGCAGGAGGGTAGGCCCCACCAAGCTGCTGAGTCCCAGGCAGAAACCATGTCTGTCACCTaGTTGATGCACAGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KTILQEGRPHQAAESQAETMSVT*LMHSTG Trigger: CCCAGTGCTGTGCATCAACCAGGTGACAGACATGGT...TTCTGCCTGGGACTCAGCAGCTTGGTGGGGCCTACCCTCCTGCAGGATGGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCAGGGCCTTTGAAACGATaGGCTCATAAGAGGATAGGG | + |
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Preference number: 2 (lower is better) Translates to: VNHPTQAAVCPLILSSQAGPLKR*AHKRIG Trigger: CCCTATCCTCTTATGAGCTCATCGTTTCAAAGGCCC...TGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAACACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTGAGTTAAGACCATCCTaGAGGAGGGTAGGCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: VNTQPCLQRPHPLLTAEPELRPS*RRVGPT Trigger: GGTGGGGCCTACCCTCCTGCAGGATGGTCTTAACTC...AGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAGTTTTCTCTGGACACAGACTGCTaGTCCTCCACCATGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SLDSWVGPGPSLFLGQFSLDTDC*SSTMSV Trigger: GACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAG...AGAAAACTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGTGTGGGGAGGAGCCCAGTCGGGGAGTGTCTCACTGCAAGCCATGCTTGAGTCGCATCAGGAGCTaGTTAGCCCAGGTGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: YMCGEEPSRGVSHCKPCLSRIRS*LAQVMP Trigger: TGGCATCACCTGGGCTAACCAGCTCCTGATGCGACT...CAAGCATGGCTTGCAGTGAGACACTCCCCGACTGGGCTCCTCCCCACACATATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCTTGGGTGCTTTGTGGTaGCTTCCAGCCTGGATGCAC | + |
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Preference number: 2 (lower is better) Translates to: TQPCLQRPHPLLTAEPQVLGALW*LPAWMH Trigger: GTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAA...GACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCACAAGGTCCACTTGGCACACTTaGTGGTGGGAGCCTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PVYRGHTHCLLLSLKSTRSTWHT*WWEPVL Trigger: TAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGA...CCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR CAA 90 bp | TGTCCTGGTTTAAGGAGTCAGACACTACTGGAGCAACAGGACTCCTaGGTGAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CPGLRSQTLLEQQDS*VKVHLAHLLVGACA Trigger: AGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTGCTCCAGTAGTGTCTGACTCCTTAAACCAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCACAAGGCCAGGTGCCACTGACTaGCAGGTTGTTGGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PVYRGHTHCLLLSLKSTRPGATD*QVVGKS Trigger: ACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGG...CCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCACAAGGAGCCCCAGGGGCCTTTaGAACGATGAGCTCATAAGA | + |
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Preference number: 2 (lower is better) Translates to: PVYRGHTHCLLLSLKSTRSPRGL*NDELIR Trigger: TCTTATGAGCTCATCGTTTCAAAGGCCCCTGGGGCT...CCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCTGCTGGCTGAGTACCAGGAGGCCTACCTaGTGGCTGAGTGTGTACACA | + |
|
Preference number: 2 (lower is better) Translates to: VDSESRAHVTRRPTCWLSTRRPT*WLSVYT Trigger: TGTGTACACACTCAGCCAGCAGGTAGGCCTCCTGGT...ACTCAGCCAGCAGGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTCCACCAGGAGGCCTACCTaGTGGCTGAGTGTGTACACA | + |
|
Preference number: 2 (lower is better) Translates to: QFCRAVLCEPPHPSSCVSTRRPT*WLSVYT Trigger: TGTGTACACACTCAGCCAGCAGGTAGGCCTCCTGGT...GGACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTTGGCACACTTGCTGGTaGGAGCCTGTGCTACCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSAELFYVNHPTQAAVCWHTCW*EPVLPV Trigger: CACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCA...ACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTCAGACTAACCGTCACTaGGTGCCTGTTCACCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSAELFYVNHPTQAAVCQTNRH*VPVHQV Trigger: CACCTGGTGAACAGGCACCCAGTGACGGTTAGTCTG...ACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CCA 90 bp | TATATGTGTGGGGAGGAGCCCAGTCGGGGAGTGTCTCACTGCAAGCCATGCTTGCACTCTGCCCTAAAATaGTGTATATGTGTGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YMCGEEPSRGVSHCKPCLHSALK*CICVGR Trigger: CCTCCCCACACATATACACCATTTTAGGGCAGAGTG...CAAGCATGGCTTGCAGTGAGACACTCCCCGACTGGGCTCCTCCCCACACATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 90 bp | TACCTGTGCGTCAACACACAGCCCTGTCTACAGAGGCCACACCCATaGCTTACTGCTGAGCCTCAAGTCCACAAGGTGTTGATTCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: YLCVNTQPCLQRPHP*LTAEPQVHKVLILS Trigger: ACTCAGAATCAACACCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTGACGCACAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGTGGGGACAGTGACAGTGTATGTCCTGGTTTAAGGAGTCAGACACTACTGGGAGAGAGCAGATACTaGCAGACTAACCGTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: WSGDSDSVCPGLRSQTLLGESRY*QTNRHW Trigger: CCAGTGACGGTTAGTCTGTCAGTATCTGCTCTCTCC...CAGTAGTGTCTGACTCCTTAAACCAGGACATACACTGTCACTGTCCCCACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTCCAGAAGAGAGAAGAGCTaGGTCTTGTCATTTTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QFCRAVLCEPPHPSSCVSRREKS*VLSFWG Trigger: ACCCCAAAATGACAAGACTCAGCTCTTCTCTCTTCT...GGACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR GCA 90 bp | TATATGTGTGGGGAGGAGCCCAGTCGGGGAGTGTCTCACTGCAAGCCATGCTTGCAGTTTTCTCCACTCTaGCCTAAAATGGTGTATATG | + |
|
Preference number: 2 (lower is better) Translates to: YMCGEEPSRGVSHCKPCLQFSPL*PKMVYM Trigger: CATATACACCATTTTAGGGCAGAGTGGAGAAAACTG...CAAGCATGGCTTGCAGTGAGACACTCCCCGACTGGGCTCCTCCCCACACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGTGGGGACAGTGACAGTGTATGTCCTGGTTTAAGGAGTCAGACACTACTGCAGTTTTCTCCACTCTaGCCTAAAATGGTGTATATG | + |
|
Preference number: 2 (lower is better) Translates to: WSGDSDSVCPGLRSQTLLQFSPL*PKMVYM Trigger: CATATACACCATTTTAGGGCAGAGTGGAGAAAACTG...CAGTAGTGTCTGACTCCTTAAACCAGGACATACACTGTCACTGTCCCCACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | GGTGCCTTCCAGCCTGGATGCACCGCCCAGCCGAGTTaGCAGGAACACCTGCCAGGCCTTAGTGAGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: GAFQPGCTAQPS*QEHLPGLSEHT Trigger: TGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACGGGTCAGTCCACTTGGCACACTaGCTGGTGGGAGCCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPPKQLCVPSSSALRHGSVHLAH*LVGACA Trigger: AGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGAC...TGACCCGTGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | CTGGATGCACCGCCCAGCCGAGTTGCCAGGAACACCTaGCAGGCCTTAGTGAGCACACACACCTGTTTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: LDAPPSRVARNT*QALVSTHTCFR Trigger: CCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGTGCATCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | TCCTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATaGACCGCCCAGCCGAGTTGCCAGGAACACCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SCWVLCGAFQPG*TAQPSCQEHLP Trigger: TGGCAGGTGTTCCTGGCAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | CTGAGTGTGTACACAGTCCTGTTGGGTGCTTTGTGGTaGCTTCCAGCCTGGATGCACCGCCCAGCCGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSVYTVLLGALW*LPAWMHRPAEL Trigger: CAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTGTGTACACACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | CTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTaGGTCAACACACAGCCCTGTCTACAGAGGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LGTLAGGSLCYL*VNTQPCLQRPH Trigger: GTGTGGCCTCTGTAGACAGGGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CCA 72 bp | TCATGGGTGCGGTCAACCATCAGTCGCATCAGGAGCTaGTTAGCCCAGGTGATGCCAAGGGCTGGAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SWVRSTISRIRS*LAQVMPRAGER Trigger: CCTCTCTCCAGCCCTTGGCATCACCTGGGCTAACCAGCTCCTGATGCGACTGATGGTTGACCGCACCCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCAGGATTGCCACAGCGGGTAGGAGCCCCAGGGGCCTTTGAAACGATGAGCATGTCTGTCACCTGGTaGATGCACAGCACTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAGLPQRVGAPGAFETMSMSVTW*MHSTGL Trigger: GAGCCCAGTGCTGTGCATCAACCAGGTGACAGACAT...GCTCATCGTTTCAAAGGCCCCTGGGGCTCCTACCCGCTGTGGCAATCCTGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | GAAGGTCCACTTGGCACACTTGCTGGTGGGAGCCTGTaGTACCTGTGCGTCAACACACAGCCCTGTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: EGPLGTLAGGSL*YLCVNTQPCLQ Trigger: CTGTAGACAGGGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CCA 72 bp | CTGGAGAGAGGCGCTCTTCTGAAGCCCCTAGTGACCTaGACACAGACTGCTGGTCCTCCACCATGTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LERGALLKPLVT*TQTAGPPPCLS Trigger: TGACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTTCAGAAGAGCGCCTCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | GGAGTCAGACACTACTGGAGCAACAGGACTCCTTGGTaGAGGTCCACTTGGCACACTTGCTGGTGGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GVRHYWSNRTPW*RSTWHTCWWEP Trigger: AGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTGCTCCAGTAGTGTCTGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR GCA 72 bp | CGCTCTTCTGAAGCCCCTAGTGACCTGGACACAGACTaGTGGTCCTCCACCATGTCTGTCACCTGGTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RSSEAPSDLDTD*WSSTMSVTWLM Trigger: CATCAACCAGGTGACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTTCAGAAGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR CCA 72 bp | GTGTCCCCTCATCCTCAGCTCTCAGGCACGGGTCAGTaGGTCATAGCTCAGTGTAGAACACTTGCATGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSPHPQLSGTGQ*VIAQCRTLACR Trigger: CCTGCATGCAAGTGTTCTACACTGAGCTATGACCCACTGACCCGTGCCTGAGAGCTGAGGATGAGGGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | GAGCTCCTGCTGCTCAGTCATCCTCTAATGGGTAGGTaGACCCCAGGGAGGAGAGAGCAGATACTGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ELLLLSHPLMGR*TPGRREQILTD Trigger: GTCTGTCAGTATCTGCTCTCTCCTCCCTGGGGTTCACCTACCCATTAGAGGATGACTGAGCAGCAGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CCA 72 bp | TTCATAAGTTGCCCAAAGCCACTTAGCCTAGACAGCTaGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FISCPKPLSLDS*VGPGPSLFLGQ Trigger: CTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGGGCAACTTATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAACACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTGTGTACACAGTCCTGTaGGGTGCTTTGTGGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VNTQPCLQRPHPLLTAEPVYTVL*GALWCL Trigger: AAGGCACCACAAAGCACCCAACAGGACTGTGTACAC...AGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | GCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTaGGCCTCAAGTCCACAAGGTGTTGATTCTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ALSTEATPIAYC*ASSPQGVDSES Trigger: GGACTCAGAATCAACACCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCCCACTGACTGACAGGTaGTTGGAAAGAGTCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HSPVYRGHTHCLLLSLKSPLTDR*LERVIR Trigger: TCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGG...GGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | AGTCGGGGAGTGTCTCACTGCAAGCCATGCTTGGCCTaGGTGGTAGGTGTTACTGTGTATGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRGVSHCKPCLA*VVGVTVYVCVC Trigger: ACACACACACACATACACAGTAACACCTACCACTCAGGCCAAGCATGGCTTGCAGTGAGACACTCCCCGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | TCATCAGAATCAGGGTTCCTTGGGACCTGCTCAGGCTaGCCCACTGGTCTCACTGTTAGTAGGACTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSESGFLGTCSG*PTGLTVSRTVF Trigger: GAACACAGTCCTACTAACAGTGAGACCAGTGGGTCAGCCTGAGCAGGTCCCAAGGAACCCTGATTCTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR CCA 72 bp | AGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTaGGACCTGCTCAGGCTGACCCACTGGTCTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLLERVIRIRVP*DLLRLTHWSHC Trigger: ACAGTGAGACCAGTGGGTCAGCCTGAGCAGGTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTGGGGACAGTGACAGTGTATGTCCTGGTTTAAGGAGTCAGACACTACTGCTGAGTCTTGTCATTTaGGGGTCCTACGGAGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: WSGDSDSVCPGLRSQTLLLSLVI*GSYGDA Trigger: GGCGTCTCCGTAGGACCCCAAAATGACAAGACTCAG...CAGTAGTGTCTGACTCCTTAAACCAGGACATACACTGTCACTGTCCCCACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACAGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTGGGACCTGCTCCTGAGTCTTGTCATTTaGGGGTCCTACGGAGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: TDRLLERVIRIRVPWDLLLSLVI*GSYGDA Trigger: GGCGTCTCCGTAGGACCCCAAAATGACAAGACTCAG...GAGCAGGTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR TCA 72 bp | CTAACCGTCACTGGGTGCCTGTTCACCAGGTGCCACTaGCTGACAGGTTGTTGGAAAGAGTCATCAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LTVTGCLFTRCH*LTGCWKESSES Trigger: TGATTCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGGTGAACAGGCACCCAGTGACGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTCCACTGACTGACAGGTaGTTGGAAAGAGTCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSAELFYVNHPTQAAVCPLTDR*LERVIR Trigger: TCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGG...ACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTACGGAGACGCCCTCTGGGCTGCCAGAGCTCCTGCTGCTCAGTCATCCTCAGCCAGCCAGGCCAGTaGTGCCCTCCAGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRRRPLGCQSSCCSVILSQPGQ*CPPGAG Trigger: GCCTGCCCCTGGAGGGCATCACTGGCCTGGCTGGCT...GAGGATGACTGAGCAGCAGGAGCTCTGGCAGCCCAGAGGGCGTCTCCGTAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCCGAGTTGCGCAGCCTCCGCTGCTaGGCGATGAGCTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGALWCLPAWMHRPAELRSLRC*AMSCHS Trigger: GCTGTGGCAGCTCATCGCGCAGCAGCGGAGGCTGCG...CAACTCGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTCCTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCCCGCAGCCTCCGCTGCTaGGCGATGAGCTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLLGALWCLPAWMHRPARSLRC*AMSCHS Trigger: GCTGTGGCAGCTCATCGCGCAGCAGCGGAGGCTGCG...GGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTCCTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCCCTGGGTCTTTCCTGCTaGGCTGCAGCCAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLLGALWCLPAWMHRPALGLSC*AAASQA Trigger: GGCCTGGCTGGCTGCAGCTCAGCAGGAAAGACCCAG...GGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGAAGGCACTGCACATCGTaGCTGGGCAGGCCGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLSLDSWVGPGPSLFLGRHCTS*LGRPVS Trigger: GCTCACCGGCCTGCCCAGCCACGATGTGCAGTGCCT...TCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGAGAGGAGAGGGGTAGGTaGGGGGCGAAGAGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLSLDSWVGPGPSLFLGEERGR*GAKSTR Trigger: CCGAGTGCTCTTCGCCCCCCACCTACCCCTCTCCTC...TCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR GCA 90 bp | GTCCTACGGAGACGCCCTCTGGGCTGCCAGAGCTCCTGCTGCTCAGTCATCCTCTTCTGCTGGAACAGATaGAGTGCTGAGAGGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRRRPLGCQSSCCSVILFCWNR*SAERTR Trigger: CCGCGTCCTCTCAGCACTGCATCTGTTCCAGCAGAA...GAGGATGACTGAGCAGCAGGAGCTCTGGCAGCCCAGAGGGCGTCTCCGTAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTAGGCACTGCACATCGTaGCTGGGCAGGCCGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQEHLPGLSEHTHLFPGRHCTS*LGRPVS Trigger: GCTCACCGGCCTGCCCAGCCACGATGTGCAGTGCCT...ACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | TGCTGGCTGAGTGTGTACACAGTCCTGTTGGGTGCTTaGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWLSVYTVLLGA*WCLPAWMHRPA Trigger: GGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTGTGTACACACTCAGCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCCCTAGGCTCAGGCGTTaGTGCTGCTCAGGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPLSLDSWVGPGPSLFLPRLRR*CCSGKL Trigger: GAGCTTCCCTGAGCAGCATCAACGCCTGAGCCTAGG...GAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTGCTCTCAGCAGGCACTaGACATCGTGGCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCQEHLPGLSEHTHLFPGALSRH*TSWLGR Trigger: CCTGCCCAGCCACGATGTGCAGTGCCTGCTGAGAGC...ACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTGTTGGGTGCTTTGTGGTGCCTTCCAGCCTGGATGCACCGCCCAGCCGACCATGTCTGTCACCTaGTTGATGCACAGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSCWVLCGAFQPGCTAQPTMSVT*LMHSTG Trigger: CCCAGTGCTGTGCATCAACCAGGTGACAGACATGGT...CGGCTGGGCGGTGCATCCAGGCTGGAAGGCACCACAAAGCACCCAACAGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR TCA 90 bp | ACTGACAGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTGGGACCTGCTCAGCCAGCCAGGCCAGTaGTGCCCTCCAGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDRLLERVIRIRVPWDLLSQPGQ*CPPGAG Trigger: GCCTGCCCCTGGAGGGCATCACTGGCCTGGCTGGCT...GAGCAGGTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCACTGATGGCTGAGGCCTaGAGGTGGAACTCACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: VNHPTQAAVCPLILSSQALMAEA*RWNSQR Trigger: TCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAG...TGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCACAGCACTGGGCTCCTaGAGGTGCTGCTCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPLSLDSWVGPGPSLFLTALGS*RCCSVF Trigger: GAAGACTGAGCAGCACCTTCAGGAGCCCAGTGCTGT...GAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGGCACGGGTCAGTGGGTCATAGCTCAGTGTAGAACACTTGCATGCAGGGCTCTCAGCAGGCACTaGACATCGTGGCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGTGQWVIAQCRTLACRALSRH*TSWLGR Trigger: CCTGCCCAGCCACGATGTGCAGTGCCTGCTGAGAGC...CCTGCATGCAAGTGTTCTACACTGAGCTATGACCCACTGACCCGTGCCTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | GTGAACCACCCCACCCAAGCAGCTGTGTGTCCCCTCATCCTCAGCTCTCAGGCAGTTGATGCACAGCACTaGGCTCCTGAAGGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNHPTQAAVCPLILSSQAVDAQH*APEGAA Trigger: AGCAGCACCTTCAGGAGCCCAGTGCTGTGCATCAAC...TGCCTGAGAGCTGAGGATGAGGGGACACACAGCTGCTTGGGTGGGGTGGTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCACAAGCCTAGGCTCAGGCGTTaGTGCTGCTCAGGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLQRPHPLLTAEPQVHKPRLRR*CCSGKL Trigger: GAGCTTCCCTGAGCAGCATCAACGCCTGAGCCTAGG...CTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCCTGATGGCTGAGGCCTaGAGGTGGAACTCACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: HLAHLLVGACATCASTHSLMAEA*RWNSQR Trigger: TCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAG...GCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCACTTAGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGAGGAAGGCATCTTCTGTaGAGATGTAGACAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLSLDSWVGPGPSLFLGGRHLL*RCRQPR Trigger: CCGGGGCTGTCTACATCTGCACAGAAGATGCCTTCC...TCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCTAAGTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTTTCTGCTGGAACAGATaGAGTGCTGAGAGGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCQEHLPGLSEHTHLFPGFCWNR*SAERTR Trigger: CCGCGTCCTCTCAGCACTGCATCTGTTCCAGCAGAA...ACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAGGAACACCTGCCAGGCCTTAGTGAGCACACACACCTGTTTCCGGGTGGAAGGCATCTTCTGTaGAGATGTAGACAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCQEHLPGLSEHTHLFPGGRHLL*RCRQPR Trigger: CCGGGGCTGTCTACATCTGCACAGAAGATGCCTTCC...ACCCGGAAACAGGTGTGTGTGCTCACTAAGGCCTGGCAGGTGTTCCTGGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAGTTTTCTGAAATGGGGCTGCAATaGAGTCAACCACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSWVGPGPSLFLGQFSEMGLQ*SQPPPG Trigger: GCCTGGTGGTGGTTGACTCCATTGCAGCCCCATTTC...AGAAAACTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGGAGAGAGCAGATACTGACAGACTAACCGTCACTGGGTGCCTGTTCAAGCCCCTAGTGACCTaGACACAGACTGCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PREERADTDRLTVTGCLFKPLVT*TQTAGP Trigger: AGGACCAGCAGTCTGTGTCCAGGTCACTAGGGGCTT...GAACAGGCACCCAGTGACGGTTAGTCTGTCAGTATCTGCTCTCTCCTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAGTTTTCTCCACTCTAGTCGCATCAGGAGCTaGTTAGCCCAGGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAGLGLAHLSSSDSFLHSSRIRS*LAQVMP Trigger: TGGCATCACCTGGGCTAACCAGCTCCTGATGCGACT...AGAGTGGAGAAAACTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| 3UTR CAA 72 bp | CTACTGGAGCAACAGGACTCCTTGGTGAAGGTCCACTaGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEQQDSLVKVH*AHLLVGACATC Trigger: ACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTGCTCCAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGGCACACTTGCTGGTGGGAGCCTGTGCTACCTGTGCGTCAACACACAGCCAAGCTCTCCTTCTGCTaGAACAGATGCAGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWHTCWWEPVLPVRQHTAKLSFC*NRCSAE Trigger: CTCAGCACTGCATCTGTTCCAGCAGAAGGAGAGCTT...GGCTGTGTGTTGACGCACAGGTAGCACAGGCTCCCACCAGCAAGTGTGCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCGGGAAGCTCTCCTTCTaGTGGAACAGATGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQPCLQRPHPLLTAEPQVGKLSF*WNRCSA Trigger: AGCACTGCATCTGTTCCAGCAGAAGGAGAGCTTCCC...GACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCCACAAGGGCCTCCATATTGTCTTaGGAACTGCACAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVYRGHTHCLLLSLKSTRASILS*ELHSQA Trigger: TGCCTGGCTGTGCAGTTCCCAAGACAATATGGAGGC...CCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | CAGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTaGGGACCTGCTCAGGCTGACCCACTGGTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QVVGKSHQNQGS*GPAQADPLVSL Trigger: CAGTGAGACCAGTGGGTCAGCCTGAGCAGGTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | AGAAAGCAGAAGAGAGAAGAGCTGAGTCTTGTCATTTaGGGGTCCTACGGAGACGCCCTCTGGGCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKQKREELSLVI*GSYGDALWAAR Trigger: TCTGGCAGCCCAGAGGGCGTCTCCGTAGGACCCCAAAATGACAAGACTCAGCTCTTCTCTCTTCTGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | GTCAACACACAGCCCTGTCTACAGAGGCCACACCCATaGCTTACTGCTGAGCCTCAAGTCCACAAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNTQPCLQRPHP*LTAEPQVHKVL Trigger: CAACACCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGTGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | GTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCTGCTGGCTGAGTCCCTCGACAGCAGGATaGGGACTTTCTTACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VDSESRAHVTRRPTCWLSPSTAG*GLSYSH Trigger: GTGTGAGTAAGAAAGTCCCCATCCTGCTGTCGAGGG...ACTCAGCCAGCAGGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR CCA 90 bp | AGTCCACAAGGTGTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCCTGGACACAGACTGCTaGTCCTCCACCATGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGVDSESRAHVTRRPTLDTDC*SSTMSV Trigger: GACAGACATGGTGGAGGACCAGCAGTCTGTGTCCAG...GGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAACACCTTGTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| 3UTR CAA 72 bp | GTGCCTGTTCACCAGGTGCCACTGACTGACAGGTTGTaGGAAAGAGTCATCAGAATCAGGGTTCCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPVHQVPLTDRL*ERVIRIRVPWD Trigger: GTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGGTGAACAGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | TGGGTGCCTGTTCACCAGGTGCCACTGACTGACAGGTaGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVPVHQVPLTDR*LERVIRIRVPW Trigger: CCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGGCACCTGGTGAACAGGCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| 3UTR CAA 72 bp | TTAAGGAGTCAGACACTACTGGAGCAACAGGACTCCTaGGTGAAGGTCCACTTGGCACACTTGCTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSQTLLEQQDS*VKVHLAHLLVG Trigger: TCCCACCAGCAAGTGTGCCAAGTGGACCTTCACCAAGGAGTCCTGTTGCTCCAGTAGTGTCTGACTCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGATTGCCACAGCGGGTAGGAGCCCCAGGGGCCTTTGAAACGATGAGCTGTTCAATGAAGATGTaGTTGCTGAACCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGLPQRVGAPGAFETMSCSMKM*LLNLIF Trigger: GAAGATCAGGTTCAGCAACCACATCTTCATTGAACA...GCTCATCGTTTCAAAGGCCCCTGGGGCTCCTACCCGCTGTGGCAATCCTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTGGGACCTGCTCAGGCTGACCTATTGTCTTGGGAACTaGACAGCCAGGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLERVIRIRVPWDLLRLTYCLGN*TARQSC Trigger: ACAGCTCTGCCTGGCTGTGCAGTTCCCAAGACAATA...GGTCAGCCTGAGCAGGTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCACAAGGTGTTGATTCTGAGTCCAGAGCACATGTTACCAGGAGGCCTACCTATTGTCTTGGGAACTaGACAGCCAGGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPQGVDSESRAHVTRRPTYCLGN*TARQSC Trigger: ACAGCTCTGCCTGGCTGTGCAGTTCCCAAGACAATA...GGTAGGCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAACACCTTGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTTCTGCAGAGCTGTTTTATGTGAACCACCCCACCCAAGCAGCTGTGTGTACAACGAAATGGGGCTaGAATGGAGTCAACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSAELFYVNHPTQAAVCTTKWG*NGVNHH Trigger: GTGGTGGTTGACTCCATTGCAGCCCCATTTCGTTGT...ACACACAGCTGCTTGGGTGGGGTGGTTCACATAAAACAGCTCTGCAGAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| 3UTR CAA 72 bp | CCATTGCTTACTGCTGAGCCTCAAGTCCACAAGGTGTaGATTCTGAGTCCAGAGCACATGTTACCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLTAEPQVHKV*ILSPEHMLPGG Trigger: GCCTCCTGGTAACATGTGCTCTGGACTCAGAATCAACACCTTGTGGACTTGAGGCTCAGCAGTAAGCAATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGACTGACAGGTTGTTGGAAAGAGTCATCAGAATCAGGGTTCCTTGGGACAAGCTCTCCTTCTGCTaGAACAGATGCAGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTDRLLERVIRIRVPWDKLSFC*NRCSAE Trigger: CTCAGCACTGCATCTGTTCCAGCAGAAGGAGAGCTT...GTCCCAAGGAACCCTGATTCTGATGACTCTTTCCAACAACCTGTCAGTCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTAGACAGCTGGGTTGGGCCTGGCCCATCTCTCTTCCTCGGACAGTTTTCTTGTTCAATGAAGATGTaGTTGCTGAACCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSWVGPGPSLFLGQFSCSMKM*LLNLIF Trigger: GAAGATCAGGTTCAGCAACCACATCTTCATTGAACA...AGAAAACTGTCCGAGGAAGAGAGATGGGCCAGGCCCAACCCAGCTGTCTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
||
| CDS TCA 90 bp | GTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTGATGGCTGAGGCCTaGAGGTGGAACTCACAACGAAATGGGGCACGTCGGCCGCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VAPSESRSFALMAEA*RWNSQRNGARRPRV Trigger: AACACGCGGCCGACGTGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| CDS TCA 90 bp | TCGCAGTGTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTGATGGCTaGGGCCTGAAGGTGGAACTCACAACGAAATGGGGCACGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQCGPQREQELRPDG*GLKVELTTKWGTSA Trigger: GGCCGACGTGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCACACTGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| CDS TCA 90 bp | GTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTGATGGCTGAGGCCTaGAGGTGGAACTCACAACGAAATGGGGCTGCAATGGAGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VAPSESRSFALMAEA*RWNSQRNGAAMEST Trigger: GGTTGACTCCATTGCAGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS TCA 90 bp | TCGCAGTGTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTGATGGCTaGGGCCTGAAGGTGGAACTCACAACGAAATGGGGCTGCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQCGPQREQELRPDG*GLKVELTTKWGCNG Trigger: TCCATTGCAGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCACACTGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS TCA 90 bp | TCAGTCTTCGCAGTGTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTaGTGGCTGAGGCCTGAAGGTGGAACTCACAACGAAATGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVFAVWPPARAGASP*WLRPEGGTHNEMGL Trigger: CAGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCACACTGCGAAGACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS TCA 90 bp | TCAGTCTTCGCAGTGTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTaGTGGCTGAGGCCTGAAGGTGGAACTCACAACGAAATGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVFAVWPPARAGASP*WLRPEGGTHNEMGH Trigger: GTGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCACACTGCGAAGACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
||
| CDS CCA 90 bp | TGGCTGAGGCCTGAAGGTGGAACTCACAACGAAATGGGGCTGCAATaGAGTCAACCACCACCAGGCGGGCCATGCCCCTCGACAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLRPEGGTHNEMGLQ*SQPPPGGPCPSTAG Trigger: TCCTGCTGTCGAGGGGCATGGCCCGCCTGGTGGTGGTTGACTCCATTGCAGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS CCA 90 bp | CTGCTGGTCCTCCACCATGTCTGTCACCTGGTTGATGCACAGCACTaGGCTCCTGAAGGTGCTGCTCAGTCTTCGCAGTGTGGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLHHVCHLVDAQH*APEGAAQSSQCGPQ Trigger: CTGGGGGCCACACTGCGAAGACTGAGCAGCACCTTCAGGAGCCCAGTGCTGTGCATCAACCAGGTGACAGACATGGTGGAGGACCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS CCA 90 bp | TGGAGTCAACCACCACCAGGCGGGCCATGCCCCTCGACAGCAGGATaGGGACTTTCTTACTCACACACTCCAACAAGGTGTCCACGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WSQPPPGGPCPSTAG*GLSYSHTPTRCPRR Trigger: CCGACGTGGACACCTTGTTGGAGTGTGTGAGTAAGAAAGTCCCCATCCTGCTGTCGAGGGGCATGGCCCGCCTGGTGGTGGTTGACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS GCA 90 bp | AACGAAATGGGGCTGCAATGGAGTCAACCACCACCAGGCGGGCCATaGCCCTCGACAGCAGGATGGGGACTTTCTTACTCACACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NEMGLQWSQPPPGGP*PSTAGWGLSYSHTP Trigger: TGGAGTGTGTGAGTAAGAAAGTCCCCATCCTGCTGTCGAGGGGCATGGCCCGCCTGGTGGTGGTTGACTCCATTGCAGCCCCATTTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR CAA 90 bp | ACACAGCCCTGTCTACAGAGGCCACACCCATTGCTTACTGCTGAGCCTCAAGTCATGTCTGTCACCTGGTaGATGCACAGCACTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQPCLQRPHPLLTAEPQVMSVTW*MHSTGL Trigger: GAGCCCAGTGCTGTGCATCAACCAGGTGACAGACAT...GACTTGAGGCTCAGCAGTAAGCAATGGGTGTGGCCTCTGTAGACAGGGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGGCACGGGTCAGTGGGTCATAGCTCAGTGTAGAACACTTGCATGCAGGTCAATGAAGATGTGGTaGCTGAACCTGATCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSGTGQWVIAQCRTLACRSMKMW*LNLIFS Trigger: CGAGAAGATCAGGTTCAGCAACCACATCTTCATTGA...CCTGCATGCAAGTGTTCTACACTGAGCTATGACCCACTGACCCGTGCCTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS-3UTR CAA 90 bp | GTAACATCGTCCTCATGGGTGCGGTCAACCATCAGTCGCATCAGGAGCTGGTTATCAATGAAGATGTGGTaGCTGAACCTGATCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: VTSSSWVRSTISRIRSWLSMKMW*LNLIFS Trigger: CGAGAAGATCAGGTTCAGCAACCACATCTTCATTGA...TAACCAGCTCCTGATGCGACTGATGGTTGACCGCACCCATGAGGACGATGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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| CDS TCA 72 bp | CAGGCGCGTCTGTCCGCAGCCTCCGCTGCTGCGCGATaGGCTGCCACAGCCGCTTGCTGGGGAAGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: QARLSAASAAAR*AATAACWGRHL Trigger: AAGATGCCTTCCCCAGCAAGCGGCTGTGGCAGCTCATCGCGCAGCAGCGGAGGCTGCGGACAGACGCGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | CCCCGAAGGTGTAGAGAGGCAGCTCTCAGCAGGCACTaGACATCGTGGCTGGGCAGGCCGGTGAGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PRRCREAALSRH*TSWLGRPVSRC Trigger: GCAGCGGCTCACCGGCCTGCCCAGCCACGATGTGCAGTGCCTGCTGAGAGCTGCCTCTCTACACCTTCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | GCGTCTGTCCGCAGCCTCCGCTGCTGCGCGATGAGCTaGCACAGCCGCTTGCTGGGGAAGGCATCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ASVRSLRCCAMS*HSRLLGKASSV Trigger: CACAGAAGATGCCTTCCCCAGCAAGCGGCTGTGGCAGCTCATCGCGCAGCAGCGGAGGCTGCGGACAGACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS TCA 72 bp | TCAGCAGGCACTGCACATCGTGGCTGGGCAGGCCGGTaGGCCGCTGCAAGTCTGGTCCGGAGTAGCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: SAGTAHRGWAGR*AAASLVRSSTE Trigger: TTCTGTGCTACTCCGGACCAGACTTGCAGCGGCTCACCGGCCTGCCCAGCCACGATGTGCAGTGCCTGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | GCCCCGGCCTCTAGGCCTCCATATTGTCTTGGGAACTaGACAGCCAGGCAGAGCTGTAGCGCCAGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: APASRPPYCLGN*TARQSCSASWV Trigger: GACCCAGCTGGCGCTACAGCTCTGCCTGGCTGTGCAGTTCCCAAGACAATATGGAGGCCTAGAGGCCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS CCA 72 bp | TGTAGAGAGGCAGCTCTCAGCAGGCACTGCACATCGTaGCTGGGCAGGCCGGTGAGCCGCTGCAAGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CREAALSRHCTS*LGRPVSRCKSG Trigger: ACCAGACTTGCAGCGGCTCACCGGCCTGCCCAGCCACGATGTGCAGTGCCTGCTGAGAGCTGCCTCTCTACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS TCA 72 bp | GCAGTGTGGCCCCCAGCGAGAGCAGGAGCTTCGCCCTaGTGGCTGAGGCCTGAAGGTGGAACTCACAACGAA | + |
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Preference number: 6 (lower is better) Translates to: AVWPPARAGASP*WLRPEGGTHNE Trigger: TTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCTGGGGGCCACACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | GCTGCCACAGCCGCTTGCTGGGGAAGGCATCTTCTGTaGAGATGTAGACAGCCCCGGCCTCTAGGCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: AATAACWGRHLL*RCRQPRPLGLH Trigger: ATGGAGGCCTAGAGGCCGGGGCTGTCTACATCTGCACAGAAGATGCCTTCCCCAGCAAGCGGCTGTGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | GGGCTGCAATGGAGTCAACCACCACCAGGCGGGCCATaGCCCTCGACAGCAGGATGGGGACTTTCTTACTCA | + |
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Preference number: 6 (lower is better) Translates to: GLQWSQPPPGGP*PSTAGWGLSYS Trigger: TGAGTAAGAAAGTCCCCATCCTGCTGTCGAGGGGCATGGCCCGCCTGGTGGTGGTTGACTCCATTGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS CCA 72 bp | CCTGAAGGTGGAACTCACAACGAAATGGGGCTGCAATaGAGTCAACCACCACCAGGCGGGCCATGCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PEGGTHNEMGLQ*SQPPPGGPCPS Trigger: CGAGGGGCATGGCCCGCCTGGTGGTGGTTGACTCCATTGCAGCCCCATTTCGTTGTGAGTTCCACCTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS CAA 90 bp | CTGTGCAGATGTAGACAGCCCCGGCCTCTAGGCCTCCATATTGTCTaGGGAACTGCACAGCCAGGCAGAGCTGTAGCGCCAGCTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCRCRQPRPLGLHIV*GTAQPGRAVAPAGS Trigger: AGACCCAGCTGGCGCTACAGCTCTGCCTGGCTGTGCAGTTCCCAAGACAATATGGAGGCCTAGAGGCCGGGGCTGTCTACATCTGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS GCA 72 bp | TGCTGCTCAGGGAAGCTCTCCTTCTGCTGGAACAGATaGAGTGCTGAGAGGACGCGGCTTCCCCGAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: CCSGKLSFCWNR*SAERTRLPRRC Trigger: ACACCTTCGGGGAAGCCGCGTCCTCTCAGCACTGCATCTGTTCCAGCAGAAGGAGAGCTTCCCTGAGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021715.6 ENSMUST00000127281.8 |
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| CDS CCA 72 bp | CCACCACCAGGCGGGCCATGCCCCTCGACAGCAGGATaGGGACTTTCTTACTCACACACTCCAACAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: PPPGGPCPSTAG*GLSYSHTPTRC Trigger: ACACCTTGTTGGAGTGTGTGAGTAAGAAAGTCCCCATCCTGCTGTCGAGGGGCATGGCCCGCCTGGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS TCA 72 bp | AGCGAGAGCAGGAGCTTCGCCCTGATGGCTGAGGCCTaGAGGTGGAACTCACAACGAAATGGGGCTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SESRSFALMAEA*RWNSQRNGAAM Trigger: CATTGCAGCCCCATTTCGTTGTGAGTTCCACCTTCAGGCCTCAGCCATCAGGGCGAAGCTCCTGCTCTCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS CCA 72 bp | CTCCACCATGTCTGTCACCTGGTTGATGCACAGCACTaGGCTCCTGAAGGTGCTGCTCAGTCTTCGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LHHVCHLVDAQH*APEGAAQSSQC Trigger: ACACTGCGAAGACTGAGCAGCACCTTCAGGAGCCCAGTGCTGTGCATCAACCAGGTGACAGACATGGTGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS CCA 72 bp | AAGGTGTCCACGTCGGCCGCGTGTTCAATGAAGATGTaGTTGCTGAACCTGATCTTCTCGATCAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KVSTSAACSMKM*LLNLIFSISSS Trigger: TGAGGAGCTGATCGAGAAGATCAGGTTCAGCAACCACATCTTCATTGAACACGCGGCCGACGTGGACACCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021715.6 |
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| CDS CCA 72 bp | AAATGGGGCACGTCGGCCGCGTGTTCAATGAAGATGTaGTTGCTGAACCTGATCTTCTCGATCAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KWGTSAACSMKM*LLNLIFSISSS Trigger: TGAGGAGCTGATCGAGAAGATCAGGTTCAGCAACCACATCTTCATTGAACACGCGGCCGACGTGCCCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127281.8 |
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