Pregenerated sensors for XRCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051768Ensembl transcript IDs: ENSMUST00000063249.9, ENSMUST00000205573.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTGGTGGCCTCGGGGGTaGGCTGGGTCCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALWWPRG*AGSCCL Trigger: CAGGCAGCAGGACCCAGCTCACCCCCGAGGCCACCA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTCCCCGGGGCTTCCCTaGGACGGCTCTCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSPGLP*DGSLCW Trigger: CCAGCACAGAGAGCCGTCCCAGGGAAGCCCCGGGGA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGCCTCGGGGGTGAGCTaGGTCCTGCTGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALASGVS*VLLPGS Trigger: AGACCCAGGCAGCAGGACCCAGCTCACCCCCGAGGC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCGGCGCCGCATGTGGTaGCAGTCCAGCACCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRRRMW*QSSTHS Trigger: AGAGTGGGTGCTGGACTGTCACCACATGCGGCGCCG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGGTCGAGTCCTGGCTaGTGCAGGACACGACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGSSPG*CRTRRG Trigger: GCCACGTCGTGTCCTGCAGCAGCCAGGACTCGACCC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGCAGGACACGACGTaGCGGAGGCTGATCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLQDTT*RRLISG Trigger: GCCGGAGATCAGCCTCCGCCACGTCGTGTCCTGCAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTGTTCACCAGCTGTaGCCCCTCCAGCCGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPVHQL*PLQPSC Trigger: GCAGCTCGGCTGGAGGGGCCACAGCTGGTGAACAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGCTGCCTGGGTCTTaGCTTTGGGCTGGGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLLPGS*LWAGAA Trigger: AGCGGCCCCAGCCCAAAGCCAAGACCCAGGCAGCAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTTTGGGAGGCTCCTaGGGCTTGGAAGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPLGGS*GLEELP Trigger: GGGCAGCTCTTCCAAGCCTCAGGAGCCTCCCAAAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTCGAGTCCTGGCTGCTaGAGGACACGACGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSSPGC*RTRRGG Trigger: TCCGCCACGTCGTGTCCTGCAGCAGCCAGGACTCGA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCCCTCCAGCCGAGCTaGCCACTAGCACCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPLQPS*PLAPPQ Trigger: TTGTGGAGGTGCTAGTGGGCAGCTCGGCTGGAGGGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGACGGCTCTCTGTGCTaGGGTAGAGGCTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALDGSLC*GRGWSC Trigger: GCAGCTCCAGCCTCTACCCCAGCACAGAGAGCCGTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTCTGGGGTCCAGTCTaGCCGATACTTGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVWGPV*PILGPQ Trigger: CTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTGGGTCTTGGCTTTaGGCTGGGGCCGCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPGSWL*AGAAFG Trigger: CCCAAAAGCGGCCCCAGCCCAAAGCCAAGACCCAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGGGTCCTGCTGCCTaGGTCTTGGCTTTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLGPAA*VLALGW Trigger: CCAGCCCAAAGCCAAGACCCAGGCAGCAGGACCCAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTCGCCATTCTCCTCTaGGGCTGGGGGCTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLAILL*GWGLPL Trigger: CAAAGGCAGCCCCCAGCCCCAGAGGAGAATGGCGAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGTTCTGGAAGCCACTaGGCACCACCACCACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGSGSH*APPPPL Trigger: AAGGGGTGGTGGTGGTGCTCAGTGGCTTCCAGAACC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTTGTCCCGGAGCTCTaGGCGGAAGGGGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLVPEL*AEGVLE Trigger: TTCCAGAACCCCTTCCGCTCAGAGCTCCGGGACAAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTCTCCTGCCTTGGCTaGCCGCCACTTCCGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLSCLG*PPLPVS Trigger: ACTTACCGGAAGTGGCGGGCAGCCAAGGCAGGAGAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCAATGGGTCGAGTCCTaGCTGCTGCAGGACACGACG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALQWVES*LLQDTT Trigger: CGTCGTGTCCTGCAGCAGCCAGGACTCGACCCATTG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAGCTGCCCACAACCTTaGGGACTGGAGAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSCPQP*GLERLR Trigger: CCTCAGCCTCTCCAGTCCCCAAGGTTGTGGGCAGCT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTGCTGGGGTAGAGGCTaGAGCTGCAGCTGGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALCWGRG*SCSWST Trigger: CGTACTCCAGCTGCAGCTCCAGCCTCTACCCCAGCA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCATCTTGCCAAGCTCTTaGGGTCCAGTGCGAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALILPSS*GPVRAP Trigger: GGGGGCTCGCACTGGACCCCAAGAGCTTGGCAAGAT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAGCGGAAGGGGTTCTaGAAGCCACTGAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALERKGF*KPLSTT Trigger: GGTGGTGCTCAGTGGCTTCCAGAACCCCTTCCGCTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAGTCTGGCCGATACTTaGCCCCCAGTTCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSLADT*PPVPGP Trigger: AGGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCACAATTTGGGTCTCTTaGGGGTGGATGGCCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALTIWVS*GWMALP Trigger: CGGCAGGGCCATCCACCCTCAAGAGACCCAAATTGT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTCCTGGGGTCCTGGTaGCGGTGCTTTGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVLGSW*RCFGLF Trigger: AAAGAGACCAAAGCACCGTCACCAGGACCCCAGGAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTTGTCCCGTCCTTCTaGCTCTTCCCCCTCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVVPSF*LFPLSV Trigger: GACACTGAGGGGGAAGAGTCAGAAGGACGGGACAAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGATGGTCTTCTCTCCTaGCTTGGCTGCCCGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALDGLLS*LGCPPL Trigger: AAGTGGCGGGCAGCCAAGGCAGGAGAGAAGACCATC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGCAGTGTAGCTGCTaGATAGCTGGGTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLQCSC*IAGSCW Trigger: CCAGCAGGACCCAGCTATGCAGCAGCTACACTGCAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCCCTTGCAGGATCTTaGCAAGCTCTTGGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPLAGS*QALGVQ Trigger: CTGGACCCCAAGAGCTTGGCAAGATCCTGCAAGGGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTCCCCAGAATCTTCTaGCCCGTTGTCCCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVPRIF*PVVPSF Trigger: GAAGGACGGGACAACGGGGCAGAAGATTCTGGGGAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTCTGGGGCTGGGGGCTaGCTTTGTTCCCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSGAGG*LCSLCL Trigger: CAAACAGAGGGAACAAAGGCAGCCCCCAGCCCCAGA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAGGCTCCTGAGGCTTaGAAGAGCTGCCCACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALEAPEA*KSCPQP Trigger: AGGTTGTGGGCAGCTCTTCCAAGCCTCAGGAGCCTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGCTGGAGCTGCAGCTaGAGTACGACTAGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGWSCS*STTRDR Trigger: TCTGTCCCTAGTCGTACTCCAGCTGCAGCTCCAGCC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTGCTTTGGTCTCTTTTaGGGTTGGTGGCCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALCFGLF*GWWPRG Trigger: CCCCCGAGGCCACCAACCCCAAAAGAGACCAAAGCA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCATTCTCCTCTGGGGCTaGGGGCTGCCTTTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALILLWG*GLPLFP Trigger: AGGGAACAAAGGCAGCCCCCAGCCCCAGAGGAGAAT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGCCCTCGAAGAAGTCTaGGAGCTCTGGGATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALALEEV*ELWDWQ Trigger: CTGCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCACCACCACCACCCCTTaGAGGATCTTGCCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALTTTTP*RILPSS Trigger: AGAGCTTGGCAAGATCCTGCAAGGGGTGGTGGTGGT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAAGAAGAGAGCCCCTaGCTTCAGGGAGTTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALEEESP*LQGVGT Trigger: AGTGCCAACTCCCTGAAGCCAGGGGCTCTCTTCTTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAGATGTGTGCTGTCTaGGGTCCAGTCTGGCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALEMCAV*GPVWPI Trigger: TATCGGCCAGACTGGACCCCAGACAGCACACATCTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCAAGGCCCAGGACCTaGCTGTATTTGGGAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPRPRT*LYLGVL Trigger: CAACACTCCCAAATACAGCCAGGTCCTGGGCCTTGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTCACTGTCACCTTCTaGGATGTAGCCTCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVTVTF*DVASAS Trigger: TGAGGCAGAGGCTACATCTCAGAAGGTGACAGTGAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAGGCCGAGCCATCATTaGCAATGTCCACACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRPSHH*QCPHCG Trigger: TCCACAGTGTGGACATTGGCAATGATGGCTCGGCCT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGTAGGACCACAGAGATaGTCTTCTCTCCTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALVGPQR*SSLLPW Trigger: CCAAGGCAGGAGAGAAGACCATCTCTGTGGTCCTAC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCAATGTCCACACTGTaGATCTGCTCCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPMSTL*ICSSFS Trigger: GGAGAAGGAGGAGCAGATCCACAGTGTGGACATTGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAAACTGGCCGAGCTTaGTCACTGTCACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALETGRA*SLSPSE Trigger: CTCAGAAGGTGACAGTGACCAAGCTCGGCCAGTTTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGCCGAGGGTTTGCTaGGAGGTTTCCTGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLPRVC*EVSCLL Trigger: TAGAAGACAGGAAACCTCCCAGCAAACCCTCGGCAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGACCTGGCTGTATTTaGGAGTGTTGGCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGPGCI*ECWQRH Trigger: GTGCCTTTGCCAACACTCCCAAATACAGCCAGGTCC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTGTGTTCTCATCTGTaGAGCCTGCATACGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLCSHL*SLHTGP Trigger: AGGACCCGTATGCAGGCTCCACAGATGAGAACACAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTCCACACTGTGGATCTaGTCCTCCTTCTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSTLWI*SSFSNC Trigger: ACAGTTGGAGAAGGAGGAGCAGATCCACAGTGTGGA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAAATGCGAACACGGTTaGGATTTGAGCCACTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALKCEHG*DLSHFG Trigger: GCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCTCTTTCACACGAAACTaGCCGAGCTTGGTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALSFTRN*PSLVTV Trigger: GACAGTGACCAAGCTCGGCCAGTTTCGTGTGAAAGA...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCGAGTCCTTGCTGTATaGCTGGCTGCACACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRVLAV*LAAHNF Trigger: AAAATTGTGTGCAGCCAGCCATACAGCAAGGACTCG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS TCA 90 bp | CCTGCCATGAGGTACCTCCGGGAGGGCAGCCGGCGCCGCATGTGGTaGCAGTCCAGCACCCACTCTTTACGCACAATCCGGCCTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAMRYLREGSRRRMW*QSSTHSLRTIRPPR Trigger: CCTTGGAGGCCGGATTGTGCGTAAAGAGTGGGTGCTGGACTGTCACCACATGCGGCGCCGGCTGCCCTCCCGGAGGTACCTCATGGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | CTCTGTGCCTTCTCCCCGGGGCTTCCCTGGGACGGCTCTCTGTGCTaGGGTAGAGGCTGGAGCTGCAGCTGGAGTACGACTAGGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCAFSPGLPWDGSLC*GRGWSCSWSTTRDR Trigger: TCTGTCCCTAGTCGTACTCCAGCTGCAGCTCCAGCCTCTACCCCAGCACAGAGAGCCGTCCCAGGGAAGCCCCGGGGAGAAGGCACAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 90 bp | GAGCCTGCATACGGGTCCTCGCCATTCTCCTCTGGGGCTGGGGGCTaGCTTTGTTCCCTCTGTTTGGCCACCCTCCTCAGTTCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EPAYGSSPFSSGAGG*LCSLCLATLLSSSS Trigger: CGAGGATGAACTGAGGAGGGTGGCCAAACAGAGGGAACAAAGGCAGCCCCCAGCCCCAGAGGAGAATGGCGAGGACCCGTATGCAGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | GCAGGTCAGCCTCTGAGGGGGTCTCACTGTCTGTGTTCTCATCTGTaGAGCCTGCATACGGGTCCTCGCCATTCTCCTCTGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGQPLRGSHCLCSHL*SLHTGPRHSPLGLG Trigger: CCCCAGCCCCAGAGGAGAATGGCGAGGACCCGTATGCAGGCTCCACAGATGAGAACACAGACAGTGAGACCCCCTCAGAGGCTGACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | GTTGGCAAAGGCACAGATGAGATGTGTGCTGTCTGGGGTCCAGTCTaGCCGATACTTGGCCCCCAGTTCCAGGGCCTTGTCCCGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGKGTDEMCAVWGPV*PILGPQFQGLVPEL Trigger: GAGCTCCGGGACAAGGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGACAGCACACATCTCATCTGTGCCTTTGCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | ATCTGTGGAGCCTGCATACGGGTCCTCGCCATTCTCCTCTGGGGCTaGGGGCTGCCTTTGTTCCCTCTGTTTGGCCACCCTCCTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICGACIRVLAILLWG*GLPLFPLFGHPPQF Trigger: GAACTGAGGAGGGTGGCCAAACAGAGGGAACAAAGGCAGCCCCCAGCCCCAGAGGAGAATGGCGAGGACCCGTATGCAGGCTCCACAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 90 bp | GGACCTCATAGTCCTGTTCACCAGCTGTGGCCCCTCCAGCCGAGCTaGCCACTAGCACCTCCACAAAGGCCGAGCCATCATTGCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GPHSPVHQLWPLQPS*PLAPPQRPSHHCQC Trigger: ACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCAGCTCGGCTGGAGGGGCCACAGCTGGTGAACAGGACTATGAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 90 bp | AGCGCTTCTCCGCTGCTGCCCGGACTAACTTGTCAGGTCCAAAAATaGGAACACGGTTGGGATTTGAGCCACTTCGGCTCTCAGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SASPLLPGLTCQVQK*EHGWDLSHFGSQRG Trigger: CCCCCTCTGAGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGCAGCGGAGAAGCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 90 bp | CAGCCGAGCTGCCCACTAGCACCTCCACAAAGGCCGAGCCATCATTaGCAATGTCCACACTGTGGATCTGCTCCTCCTTCTCCAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QPSCPLAPPQRPSHH*QCPHCGSAPPSPTV Trigger: TACAGTTGGAGAAGGAGGAGCAGATCCACAGTGTGGACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCAGCTCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 90 bp | TCCTCCTCTCATCCCCAGGGAACTCGCCATACAGGAAGAAGTGTTTaGCCTCGAAGAAGTCTGGGAGCTCTGGGATTGGCAGGTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSHPQGTRHTGRSV*PRRSLGALGLAGQP Trigger: AGGCTGACCTGCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGCAAACACTTCTTCCTGTATGGCGAGTTCCCTGGGGATGAGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS TCA 90 bp | TCTTCTAGACTCAAGTCCAGTTTTCTCTTCCCTTTGGGAGGCTCCTaGGGCTTGGAAGAGCTGCCCACAACCTTGGGGACTGGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRLKSSFLFPLGGS*GLEELPTTLGTGEA Trigger: AGCCTCTCCAGTCCCCAAGGTTGTGGGCAGCTCTTCCAAGCCTCAGGAGCCTCCCAAAGGGAAGAGAAAACTGGACTTGAGTCTAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | AGCACCTCCACAAAGGCCGAGCCATCATTGCCAATGTCCACACTGTaGATCTGCTCCTCCTTCTCCAACTGTAGGACCACAGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: STSTKAEPSLPMSTL*ICSSFSNCRTTEMV Trigger: GACCATCTCTGTGGTCCTACAGTTGGAGAAGGAGGAGCAGATCCACAGTGTGGACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | AACTTCACAAAACTCAGGCCGTATGGCGAGTCCTTGCTGTATGGCTaGCTGCACACAATTTTAACACGGTCCCAGCGCTTCTCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NFTKLRPYGESLLYG*LHTILTRSQRFSAA Trigger: AGCAGCGGAGAAGCGCTGGGACCGTGTTAAAATTGTGTGCAGCCAGCCATACAGCAAGGACTCGCCATACGGCCTGAGTTTTGTGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 90 bp | GTGAAACTTCACAAAACTCAGGCCGTATGGCGAGTCCTTGCTGTATaGCTGGCTGCACACAATTTTAACACGGTCCCAGCGCTTCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VKLHKTQAVWRVLAV*LAAHNFNTVPALLR Trigger: GCGGAGAAGCGCTGGGACCGTGTTAAAATTGTGTGCAGCCAGCCATACAGCAAGGACTCGCCATACGGCCTGAGTTTTGTGAAGTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTGCTGCCTGGGTCTaGGCTTTGGGCTGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPAAWV*ALGWGR Trigger: GCGGCCCCAGCCCAAAGCCAAGACCCAGGCAGCAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCCAGTTCCAGGGCCTaGTCCCGGAGCTCTGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPSSRA*SRSSER Trigger: CCGCTCAGAGCTCCGGGACAAGGCCCTGGAACTGGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCAGTCTGGCCGATACTaGGCCCCCAGTTCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALQSGRY*APSSRA Trigger: GGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACTG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGGCTGGGGCCGCTTTaGGGGAAGCTTGGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGLGPL*GKLGSF Trigger: GAAGCTCCCAAGCTTCCCCAAAAGCGGCCCCAGCCC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGCCTGGGTCTTGGCTTaGGGCTGGGGCCGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALAWVLA*GWGRFW Trigger: CCAAAAGCGGCCCCAGCCCAAAGCCAAGACCCAGGC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAGGGCCTCCTCAAAGTaGGGGTCCCACTCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRASSK*GSHSWA Trigger: GGCCCAGGAGTGGGACCCCAACTTTGAGGAGGCCCT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGAGCTGCCCACAACCTaGGGGACTGGAGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALELPTT*GTGEAE Trigger: CTCAGCCTCTCCAGTCCCCAAGGTTGTGGGCAGCTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGGCTGGGGGCTGCCTTaGTTCCCTCTGTTTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALGWGLP*FPLFGH Trigger: GTGGCCAAACAGAGGGAACAAAGGCAGCCCCCAGCC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS CCA 90 bp | ATCTTTGTCAGGAGGGCTGTGAAACTTCACAAAACTCAGGCCGTATaGCGAGTCCTTGCTGTATGGCTGGCTGCACACAATTTTAACACG | + |
|
Preference number: 5 (lower is better) Translates to: IFVRRAVKLHKTQAV*RVLAVWLAAHNFNT Trigger: CGTGTTAAAATTGTGTGCAGCCAGCCATACAGCAAGGACTCGCCATACGGCCTGAGTTTTGTGAAGTTTCACAGCCCTCCTGACAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCGCTTTTGGGGAAGCTaGGGAGCTTCGTCTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRFWGS*GASSSP Trigger: CGGCGAAGACGAAGCTCCCAAGCTTCCCCAAAAGCG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTGGCTTCAGGGAGTaGGCACTGTCATCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPGFRE*ALSSSS Trigger: AGAGGAGGATGACAGTGCCAACTCCCTGAAGCCAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGACAATTTGGGTCTCTaGAGGGTGGATGGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALDNLGL*RVDGPA Trigger: GGCAGGGCCATCCACCCTCAAGAGACCCAAATTGTC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAAGGCCGAGCCATCATaGCCAATGTCCACACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALKAEPS*PMSTLW Trigger: CCACAGTGTGGACATTGGCAATGATGGCTCGGCCTT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCCTGGTGACGGTGCTTaGGTCTCTTTTGGGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALPGDGA*VSFGVG Trigger: ACCAACCCCAAAAGAGACCAAAGCACCGTCACCAGG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGCTGCCCGGACTAACTaGTCAGGTCCAAAAATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALAARTN*SGPKMR Trigger: TCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAGGACCTGGCTGTATTaGGGAGTGTTGGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALRTWLY*GVLAKA Trigger: TGCCTTTGCCAACACTCCCAAATACAGCCAGGTCCT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTTTGTTCCCTCTGTTaGGCCACCCTCCTCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLCSLC*ATLLSS Trigger: TGAACTGAGGAGGGTGGCCAAACAGAGGGAACAAAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCAAAATGCGAACACGGTaGGGATTTGAGCCACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALKMRTR*GFEPLR Trigger: CCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTT...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCCTAGGGACAGACAATTaGGGTCTCTTGAGGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALLGTDN*GLLRVD Trigger: ATCCACCCTCAAGAGACCCAAATTGTCTGTCCCTAG...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCAAACAAAGTCTCCTTTATTAAACTCTTGTGTGTACACACGTGTGCACTCGCTGATGACGTCTTGTaGATACGACTGAAGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASNKVSFIKLLCVHTCALADDVL*IRLKKR Trigger: TCTCTTCTTCAGTCGTATCAACAAGACGTCATCAGC...GAGTGCACACGTGTGTACACACAAGAGTTTAATAAAGGAGACTTTGTTTGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063249.9 |
||
| CDS TCA 72 bp | AGGTACCTCCGGGAGGGCAGCCGGCGCCGCATGTGGTaGCAGTCCAGCACCCACTCTTTACGCACAATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RYLREGSRRRMW*QSSTHSLRTIR Trigger: CCGGATTGTGCGTAAAGAGTGGGTGCTGGACTGTCACCACATGCGGCGCCGGCTGCCCTCCCGGAGGTACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | TTCTCCCCGGGGCTTCCCTGGGACGGCTCTCTGTGCTaGGGTAGAGGCTGGAGCTGCAGCTGGAGTACGACT | + |
|
Preference number: 6 (lower is better) Translates to: FSPGLPWDGSLC*GRGWSCSWSTT Trigger: AGTCGTACTCCAGCTGCAGCTCCAGCCTCTACCCCAGCACAGAGAGCCGTCCCAGGGAAGCCCCGGGGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | GATGTGTGCTGTCTGGGGTCCAGTCTGGCCGATACTTaGCCCCCAGTTCCAGGGCCTTGTCCCGGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DVCCLGSSLADT*PPVPGPCPGAL Trigger: CAGAGCTCCGGGACAAGGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGACAGCACACATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | GCACAGATGAGATGTGTGCTGTCTGGGGTCCAGTCTGGCCGATACTaGGCCCCCAGTTCCAGGGCCTTGTCCCGGAGCTCTGAGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AQMRCVLSGVQSGRY*APSSRALSRSSERK Trigger: CTTCCGCTCAGAGCTCCGGGACAAGGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGACAGCACACATCTCATCTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 72 bp | AGTCCTGTTCACCAGCTGTGGCCCCTCCAGCCGAGCTaGCCACTAGCACCTCCACAAAGGCCGAGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPVHQLWPLQPS*PLAPPQRPSHH Trigger: ATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCAGCTCGGCTGGAGGGGCCACAGCTGGTGAACAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | AGATGTGTGCTGTCTGGGGTCCAGTCTGGCCGATACTaGGCCCCCAGTTCCAGGGCCTTGTCCCGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RCVLSGVQSGRY*APSSRALSRSS Trigger: AGAGCTCCGGGACAAGGCCCTGGAACTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGACAGCACACATCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | TGCATACGGGTCCTCGCCATTCTCCTCTGGGGCTGGGGGCTGCCTTaGTTCCCTCTGTTTGGCCACCCTCCTCAGTTCATCCTCGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CIRVLAILLWGWGLP*FPLFGHPPQFILGV Trigger: GACACCGAGGATGAACTGAGGAGGGTGGCCAAACAGAGGGAACAAAGGCAGCCCCCAGCCCCAGAGGAGAATGGCGAGGACCCGTATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 72 bp | GGGGGTCTCACTGTCTGTGTTCTCATCTGTGGAGCCTaGATACGGGTCCTCGCCATTCTCCTCTGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGLTVCVLICGA*IRVLAILLWGW Trigger: CCAGCCCCAGAGGAGAATGGCGAGGACCCGTATGCAGGCTCCACAGATGAGAACACAGACAGTGAGACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS TCA 72 bp | CCTTGGCTGCCCGCCACTTCCGGTAAGTGTCCGCCTTaGGAAGATTTTCGGCACAATGGGTCGAGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PWLPATSGKCPP*EDFRHNGSSPG Trigger: GCCAGGACTCGACCCATTGTGCCGAAAATCTTCTCAAGGCGGACACTTACCGGAAGTGGCGGGCAGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | GGAGCTGCAGCTGGAGTACGACTAGGGACAGACAATTaGGGTCTCTTGAGGGTGGATGGCCCTGCCGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAAAGVRLGTDN*GLLRVDGPAEG Trigger: ACCCTCGGCAGGGCCATCCACCCTCAAGAGACCCAAATTGTCTGTCCCTAGTCGTACTCCAGCTGCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | GGAGCTGCAGCTGGAGTACGACTAGGGACAGACAATTTGGGTCTCTaGAGGGTGGATGGCCCTGCCGAGGGTTTGCTGGGAGGTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAAAGVRLGTDNLGL*RVDGPAEGLLGGFL Trigger: CAGGAAACCTCCCAGCAAACCCTCGGCAGGGCCATCCACCCTCAAGAGACCCAAATTGTCTGTCCCTAGTCGTACTCCAGCTGCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | GTAGAGGCTGGAGCTGCAGCTGGAGTACGACTAGGGACAGACAATTaGGGTCTCTTGAGGGTGGATGGCCCTGCCGAGGGTTTGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VEAGAAAGVRLGTDN*GLLRVDGPAEGLLG Trigger: TCCCAGCAAACCCTCGGCAGGGCCATCCACCCTCAAGAGACCCAAATTGTCTGTCCCTAGTCGTACTCCAGCTGCAGCTCCAGCCTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | CCAGCCGAGCTGCCCACTAGCACCTCCACAAAGGCCGAGCCATCATaGCCAATGTCCACACTGTGGATCTGCTCCTCCTTCTCCAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PAELPTSTSTKAEPS*PMSTLWICSSFSNC Trigger: ACAGTTGGAGAAGGAGGAGCAGATCCACAGTGTGGACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCAGCTCGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | CTCCTCCTCTCATCCCCAGGGAACTCGCCATACAGGAAGAAGTGTTaGCCCTCGAAGAAGTCTGGGAGCTCTGGGATTGGCAGGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSSPGNSPYRKKC*PSKKSGSSGIGRSA Trigger: GGCTGACCTGCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGCAAACACTTCTTCCTGTATGGCGAGTTCCCTGGGGATGAGAGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | CCTCTGAGGGGGTCTCACTGTCTGTGTTCTCATCTGTaGAGCCTGCATACGGGTCCTCGCCATTCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLRGSHCLCSHL*SLHTGPRHSPL Trigger: CAGAGGAGAATGGCGAGGACCCGTATGCAGGCTCCACAGATGAGAACACAGACAGTGAGACCCCCTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | TCCATCAGGGCCTCCTCAAAGTTGGGGTCCCACTCCTaGGCCGTGATGACGAACTGGACCCGCTCATTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SIRASSKLGSHS*AVMTNWTRSFI Trigger: TATGAATGAGCGGGTCCAGTTCGTCATCACGGCCCAGGAGTGGGACCCCAACTTTGAGGAGGCCCTGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | GCTGGAGTACGACTAGGGACAGACAATTTGGGTCTCTaGAGGGTGGATGGCCCTGCCGAGGGTTTGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGVRLGTDNLGL*RVDGPAEGLLG Trigger: TCCCAGCAAACCCTCGGCAGGGCCATCCACCCTCAAGAGACCCAAATTGTCTGTCCCTAGTCGTACTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | AGTGTTTGCCCTCGAAGAAGTCTGGGAGCTCTGGGATaGGCAGGTCAGCCTCTGAGGGGGTCTCACTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVCPRRSLGALG*AGQPLRGSHCL Trigger: CAGACAGTGAGACCCCCTCAGAGGCTGACCTGCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGCAAACACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | GGCTCTCTGTGCTGGGGTAGAGGCTGGAGCTGCAGCTaGAGTACGACTAGGGACAGACAATTTGGGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSLCWGRGWSCS*STTRDRQFGSL Trigger: AAGAGACCCAAATTGTCTGTCCCTAGTCGTACTCCAGCTGCAGCTCCAGCCTCTACCCCAGCACAGAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | AGTGTTGGCAAAGGCACAGATGAGATGTGTGCTGTCTaGGGTCCAGTCTGGCCGATACTTGGCCCCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVGKGTDEMCAV*GPVWPILGPQF Trigger: GAACTGGGGGCCAAGTATCGGCCAGACTGGACCCCAGACAGCACACATCTCATCTGTGCCTTTGCCAACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | CTGCCCACTAGCACCTCCACAAAGGCCGAGCCATCATaGCCAATGTCCACACTGTGGATCTGCTCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPTSTSTKAEPS*PMSTLWICSSF Trigger: GAAGGAGGAGCAGATCCACAGTGTGGACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | CGGTCCCAGCGCTTCTCCGCTGCTGCCCGGACTAACTaGTCAGGTCCAAAAATGCGAACACGGTTGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: RSQRFSAAARTN*SGPKMRTRLGF Trigger: AAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGCAGCGGAGAAGCGCTGGGACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | TTGGGTCTCTTGAGGGTGGATGGCCCTGCCGAGGGTTaGCTGGGAGGTTTCCTGTCTTCTAGACTCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLLRVDGPAEG*LGGFLSSRLKS Trigger: GGACTTGAGTCTAGAAGACAGGAAACCTCCCAGCAAACCCTCGGCAGGGCCATCCACCCTCAAGAGACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | TCTTTACGCACAATCCGGCCTCCAAGGCCCAGGACCTGGCTGTATTaGGGAGTGTTGGCAAAGGCACAGATGAGATGTGTGCTGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRTIRPPRPRTWLY*GVLAKAQMRCVLSG Trigger: CCCAGACAGCACACATCTCATCTGTGCCTTTGCCAACACTCCCAAATACAGCCAGGTCCTGGGCCTTGGAGGCCGGATTGTGCGTAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 72 bp | TGCCCACTAGCACCTCCACAAAGGCCGAGCCATCATTaGCAATGTCCACACTGTGGATCTGCTCCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLAPPQRPSHH*QCPHCGSAPPS Trigger: AGAAGGAGGAGCAGATCCACAGTGTGGACATTGGCAATGATGGCTCGGCCTTTGTGGAGGTGCTAGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 72 bp | CCGCTGCTGCCCGGACTAACTTGTCAGGTCCAAAAATaGGAACACGGTTGGGATTTGAGCCACTTCGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPGLTCQVQK*EHGWDLSHFGS Trigger: AGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGCAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS GCA 72 bp | CATCCCCAGGGAACTCGCCATACAGGAAGAAGTGTTTaGCCTCGAAGAAGTCTGGGAGCTCTGGGATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPQGTRHTGRSV*PRRSLGALGLA Trigger: TGCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGCAAACACTTCTTCCTGTATGGCGAGTTCCCTGGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | CCTGCTGGGTCACTCGTAGAGGCTGATGACGTCTTGTaGATACGACTGAAGAAGAGAGCCCCTGGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGSLVEADDVL*IRLKKRAPGFR Trigger: CCTGAAGCCAGGGGCTCTCTTCTTCAGTCGTATCAACAAGACGTCATCAGCCTCTACGAGTGACCCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | GGTCCTGCTGGGTCACTCGTAGAGGCTGATGACGTCTaGTTGATACGACTGAAGAAGAGAGCCCCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPAGSLVEADDV*LIRLKKRAPGF Trigger: GAAGCCAGGGGCTCTCTTCTTCAGTCGTATCAACAAGACGTCATCAGCCTCTACGAGTGACCCAGCAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | ACAATCCGGCCTCCAAGGCCCAGGACCTGGCTGTATTaGGGAGTGTTGGCAAAGGCACAGATGAGATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TIRPPRPRTWLY*GVLAKAQMRCV Trigger: CACACATCTCATCTGTGCCTTTGCCAACACTCCCAAATACAGCCAGGTCCTGGGCCTTGGAGGCCGGATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | TCATCCCCAGGGAACTCGCCATACAGGAAGAAGTGTTaGCCCTCGAAGAAGTCTGGGAGCTCTGGGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPGNSPYRKKC*PSKKSGSSGIG Trigger: GCCAATCCCAGAGCTCCCAGACTTCTTCGAGGGCAAACACTTCTTCCTGTATGGCGAGTTCCCTGGGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | GCTGCTGCCCGGACTAACTTGTCAGGTCCAAAAATGCGAACACGGTaGGGATTTGAGCCACTTCGGCTCTCAGAGGGGGACATGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAARTNLSGPKMRTR*GFEPLRLSEGDMKE Trigger: CTCTTTCATGTCCCCCTCTGAGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 72 bp | CGGACTAACTTGTCAGGTCCAAAAATGCGAACACGGTaGGGATTTGAGCCACTTCGGCTCTCAGAGGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RTNLSGPKMRTR*GFEPLRLSEGD Trigger: GTCCCCCTCTGAGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CCA 72 bp | GGACTAACTTGTCAGGTCCAAAAATGCGAACACGGTTaGGATTTGAGCCACTTCGGCTCTCAGAGGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GLTCQVQKCEHG*DLSHFGSQRGT Trigger: TGTCCCCCTCTGAGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS CAA 90 bp | ATTTTAACACGGTCCCAGCGCTTCTCCGCTGCTGCCCGGACTAACTaGTCAGGTCCAAAAATGCGAACACGGTTGGGATTTGAGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: ILTRSQRFSAAARTN*SGPKMRTRLGFEPL Trigger: AAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAGTTAGTCCGGGCAGCAGCGGAGAAGCGCTGGGACCGTGTTAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||
| CDS TCA 72 bp | CTTGTCAGGTCCAAAAATGCGAACACGGTTGGGATTTaGGCCACTTCGGCTCTCAGAGGGGGACATGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVRSKNANTVGI*ATSALRGGHER Trigger: TCTTTCATGTCCCCCTCTGAGAGCCGAAGTGGCTCAAATCCCAACCGTGTTCGCATTTTTGGACCTGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063249.9 ENSMUST00000205573.2 |
||