Pregenerated sensors for XPOT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034667Ensembl transcript IDs: ENSMUST00000039810.8, ENSMUST00000217865.2, ENSMUST00000218004.2, ENSMUST00000219334.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTGAGGATGACCTGGCCCTTTCCCTTTCCGTTCCTCTGCTTTTaGGCAGTGCTTGGGATAGAAGTCGGCCGCCGCTGGCGTTCACTA | + |
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Preference number: 1 (lower is better) Translates to: WLRMTWPFPFPFLCF*AVLGIEVGRRWRSL Trigger: TAGTGAACGCCAGCGGCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 90 bp | ACTATGTGGCTGAGGATGACCTGGCCCTTTCCCTTTCCGTTCCTCTaGTTTTGCGCAGTGCTTGGGATAGAAGTCGGCCGCCGCTGGCGT | + |
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Preference number: 1 (lower is better) Translates to: TMWLRMTWPFPFPFL*FCAVLGIEVGRRWR Trigger: ACGCCAGCGGCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCACATAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 90 bp | GCAGTCCAGGCCGACCTTGGACTCACTATGTGGCTGAGGATGACCTaGCCCTTTCCCTTTCCGTTCCTCTGCTTTTGCGCAGTGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: AVQADLGLTMWLRMT*PFPFPFLCFCAVLG Trigger: CCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCACATAGTGAGTCCAAGGTCGGCCTGGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 90 bp | CGCCTACAGCTGGGTTGCCGGACTTCCGTCTGTCTTTCCCGAGGCTaGTCTTCTGGCTTTCTCCTGTTGCACGAAGCAGCACACATAGTT | + |
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Preference number: 1 (lower is better) Translates to: RLQLGCRTSVCLSRG*SSGFLLLHEAAHIV Trigger: AACTATGTGTGCTGCTTCGTGCAACAGGAGAAAGCCAGAAGAGCAGCCTCGGGAAAGACAGACGGAAGTCCGGCAACCCAGCTGTAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 90 bp | CTAACTGCATTCCTAGACAGACTCTCGTGCAGTCCAGGCCGACCTTaGACTCACTATGTGGCTGAGGATGACCTGGCCCTTTCCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LTAFLDRLSCSPGRP*THYVAEDDLALSLS Trigger: GGAAAGGGAAAGGGCCAGGTCATCCTCAGCCACATAGTGAGTCCAAGGTCGGCCTGGACTGCACGAGAGTCTGTCTAGGAATGCAGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR TCA 90 bp | AGGAACCCACACTCCCATCTGCTGATTGTTAGGTGGGAATCAGTGTaGGTAAGGTGGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: RNPHSHLLIVRWESV*VRWGKEALCNNSGK Trigger: TTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCCACCTTACTCACACTGATTCCCACCTAACAATCAGCAGATGGGAGTGTGGGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR TCA 90 bp | TCTTCTGGCTTTCTCCTGTTGCACGAAGCAGCACACATAGTTAATTaGCTGCAAGTCATCAACACACGGGTGGTCAGACTTGGTGCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SSGFLLLHEAAHIVN*LQVINTRVVRLGAS Trigger: AGAAGCACCAAGTCTGACCACCCGTGTGTTGATGACTTGCAGTCAATTAACTATGTGTGCTGCTTCGTGCAACAGGAGAAAGCCAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTaGTACACACTAATTGTACACTTGTACAATTCTGCTGTGTCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: LDPESSLYKLVTAVL*YTLIVHLYNSAVSH Trigger: GTGGGACACAGCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR TCA 90 bp | GGATTCTTTACAAGTTATGAGGTAGCTACCACTGTTCCCCATTTCTaGCGGGGAAACCAAGGCAGGAAGAAGTTATTTAACTTGCTCAAG | + |
|
Preference number: 1 (lower is better) Translates to: GFFTSYEVATTVPHF*RGNQGRKKLFNLLK Trigger: CTTGAGCAAGTTAAATAACTTCTTCCTGCCTTGGTTTCCCCGTCAGAAATGGGGAACAGTGGTAGCTACCTCATAACTTGTAAAGAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 90 bp | TACACACTAATTGTACACTTGTACAATTCTGCTGTGTCCCACAGATaGTATTACCTCTCCCACAGTGTACAGGAACATAGCAAAGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: YTLIVHLYNSAVSHR*YYLSHSVQEHSKAT Trigger: TGTTGCTTTGCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACACAGCAGAATTGTACAAGTGTACAATTAGTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 90 bp | CTACTTAAATCTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTaGTGTGCTCTGCTACACACTAATTGTACACTTGTACAATTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: LLKSGSRVLVIQARN*CALLHTNCTLVQFC Trigger: GCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAGATTTAAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CAA 90 bp | GTGGCTGAGGATGACCTGGCCCTTTCCCTTTCCGTTCCTCTGCTTTaGCGCAGTGCTTGGGATAGAAGTCGGCCGCCGCTGGCGTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VAEDDLALSLSVPLL*RSAWDRSRPPLAFT Trigger: AGTGAACGCCAGCGGCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCAAGAGGTGGGAATCAGTGTaGGTAAGGTGGGGAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ICVPSLLCGARDGTWVFKRWESV*VRWGKE Trigger: CTCCTTTCCCCACCTTACTCACACTGATTCCCACCT...CTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCAAGCCGTTCCTCTGCTTTTaGGCAGTGCTTGGGATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ICVPSLLCGARDGTWVFKPFLCF*AVLGIE Trigger: TTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGG...CTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAACACAGCTCATGTGTCTaGATACACAGAACCAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQHSSCV*IHRTKH Trigger: ATGTTTGGTTCTGTGTATGCAGACACATGAGCTGTG...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAACAGGCTTTTACTAACTaGATTCCTAGACAGACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQQAFTN*IPRQTL Trigger: GAGAGTCTGTCTAGGAATGCAGTTAGTAAAAGCCTG...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCACAGATGCTATTACCTCTCCCACAGTGTACAGGAACATAGCAAAGCAATCTGTGTCCCCTCCCTaGTCTGTGGTGCTAGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CPTDAITSPTVYRNIAKQSVSPP*SVVLGM Trigger: CATCCCTAGCACCACAGAGCAGGGAGGGGACACAGA...TTGCTTTGCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAAATACTGAGTAGACAGGCTTTTACTAACTaGATTCCTAGACAGACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WQSTPATRDWDLAKILSRQAFTN*IPRQTL Trigger: GAGAGTCTGTCTAGGAATGCAGTTAGTAAAAGCCTG...TCTACTCAGTATTTTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGACTCCGGAAAAGACTTaGTGTATTTCACTATGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRIKPWWQSTPATRDWDLTPEKT*CISLCK Trigger: TTTACATAGTGAAATACACCAAGTCTTTTCCGGAGT...CAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATACGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTAACTGCTGTGCTCTGCTACACACTAATTGTACACTTGTACAATTCTGCGCTAGGGATGGAACTTaGGTCTTCAAGCAAGCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ARNCCALLHTNCTLVQFCARDGT*VFKQAL Trigger: GAGGGCTTGCTTGAAGACCCAAGTTCCATCCCTAGC...GCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAAGGTGGGAATCAGTGTaGGTAAGGTGGGGAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QNQTNKSKWAVLGGHLISRWESV*VRWGKE Trigger: CTCCTTTCCCCACCTTACTCACACTGATTCCCACCT...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCACAGATGCTATTACCTCTCCCACAGTGTACAGGAACATAGCAAAGCAACACAGCTCATGTGTCTaGATACACAGAACCAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: CPTDAITSPTVYRNIAKQHSSCV*IHRTKH Trigger: ATGTTTGGTTCTGTGTATGCAGACACATGAGCTGTG...TTGCTTTGCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAAATACTGAGTAGAGCGCCTACAGCTGGGTaGCCGGACTTCCGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: WQSTPATRDWDLAKILSRAPTAG*PDFRLS Trigger: AGACAGACGGAAGTCCGGCAACCCAGCTGTAGGCGC...TCTACTCAGTATTTTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | CTGGGTTGCCGGACTTCCGTCTGTCTTTCCCGAGGCTaGTCTTCTGGCTTTCTCCTGTTGCACGAAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LGCRTSVCLSRG*SSGFLLLHEAA Trigger: TGCTGCTTCGTGCAACAGGAGAAAGCCAGAAGAGCAGCCTCGGGAAAGACAGACGGAAGTCCGGCAACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | CTGAGGATGACCTGGCCCTTTCCCTTTCCGTTCCTCTaGTTTTGCGCAGTGCTTGGGATAGAAGTCGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: LRMTWPFPFPFL*FCAVLGIEVGR Trigger: GCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | TCTCGTGCAGTCCAGGCCGACCTTGGACTCACTATGTaGCTGAGGATGACCTGGCCCTTTCCCTTTCCGTTC | + |
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Preference number: 3 (lower is better) Translates to: SRAVQADLGLTM*LRMTWPFPFPF Trigger: GAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCACATAGTGAGTCCAAGGTCGGCCTGGACTGCACGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | GCCGACCTTGGACTCACTATGTGGCTGAGGATGACCTaGCCCTTTCCCTTTCCGTTCCTCTGCTTTTGCGCA | + |
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Preference number: 3 (lower is better) Translates to: ADLGLTMWLRMT*PFPFPFLCFCA Trigger: TGCGCAAAAGCAGAGGAACGGAAAGGGAAAGGGCCAGGTCATCCTCAGCCACATAGTGAGTCCAAGGTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | AGATGGGGGCCTGAATTTGGATCCCGTATCAAACCTTaGTGGCAGTCAACACCTGCAACCCGGGACTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: RWGPEFGSRIKP*WQSTPATRDWD Trigger: GTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATACGGGATCCAAATTCAGGCCCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | CTTTCCCTTTCCGTTCCTCTGCTTTTGCGCAGTGCTTaGGATAGAAGTCGGCCGCCGCTGGCGTTCACTATA | + |
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Preference number: 3 (lower is better) Translates to: LSLSVPLLLRSA*DRSRPPLAFTI Trigger: TATAGTGAACGCCAGCGGCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | GTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTaGGTCTTCAAGCAAGCCCTCTACCACCAAGTATAC | + |
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Preference number: 3 (lower is better) Translates to: VPSLLCGARDGT*VFKQALYHQVY Trigger: GTATACTTGGTGGTAGAGGGCTTGCTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAAATACTGAGTAGACACGGGTGGTCAGACTaGGTGCTTCTCAGCTTAATC | + |
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Preference number: 3 (lower is better) Translates to: WQSTPATRDWDLAKILSRHGWSD*VLLSLI Trigger: GATTAAGCTGAGAAGCACCAAGTCTGACCACCCGTG...TCTACTCAGTATTTTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTGCTACACACACGGGTGGTCAGACTaGGTGCTTCTCAGCTTAATC | + |
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Preference number: 3 (lower is better) Translates to: LDPESSLYKLVTAVLCYTHGWSD*VLLSLI Trigger: GATTAAGCTGAGAAGCACCAAGTCTGACCACCCGTG...TGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | AAAAAGACTCAACAGACCTATGTTGTGAGTGACCGCTaGGGCACAGCCTGTGACATAAGGAACCCACACTCC | + |
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Preference number: 3 (lower is better) Translates to: KKTQQTYVVSDR*GTACDIRNPHS Trigger: GGAGTGTGGGTTCCTTATGTCACAGGCTGTGCCCCAGCGGTCACTCACAACATAGGTCTGTTGAGTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | AAAAGACAAATCTCTCCTAAATCTGTGTCCCCTCCCTaGTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: KRQISPKSVSPP*SVVLGMELGSS Trigger: TGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGATTTAGGAGAGATTTGTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCACAGATGCTATTACCTCTCCCACAGTGTACAGGAACATAGCAAAGCAATCTGGCTTTCTCCTGTaGCACGAAGCAGCACACATA | + |
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Preference number: 3 (lower is better) Translates to: CPTDAITSPTVYRNIAKQSGFLL*HEAAHI Trigger: TATGTGTGCTGCTTCGTGCAACAGGAGAAAGCCAGA...TTGCTTTGCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR TCA 72 bp | CACTCCCATCTGCTGATTGTTAGGTGGGAATCAGTGTaGGTAAGGTGGGGAAAGGAGGCTCTTTGTAATAAC | + |
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Preference number: 3 (lower is better) Translates to: HSHLLIVRWESV*VRWGKEALCNN Trigger: GTTATTACAAAGAGCCTCCTTTCCCCACCTTACTCACACTGATTCCCACCTAACAATCAGCAGATGGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR TCA 72 bp | ACAAGTTATGAGGTAGCTACCACTGTTCCCCATTTCTaGCGGGGAAACCAAGGCAGGAAGAAGTTATTTAAC | + |
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Preference number: 3 (lower is better) Translates to: TSYEVATTVPHF*RGNQGRKKLFN Trigger: GTTAAATAACTTCTTCCTGCCTTGGTTTCCCCGTCAGAAATGGGGAACAGTGGTAGCTACCTCATAACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | ATTGTACACTTGTACAATTCTGCTGTGTCCCACAGATaGTATTACCTCTCCCACAGTGTACAGGAACATAGC | + |
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Preference number: 3 (lower is better) Translates to: IVHLYNSAVSHR*YYLSHSVQEHS Trigger: GCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACACAGCAGAATTGTACAAGTGTACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | TCTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTaGTGTGCTCTGCTACACACTAATTGTACACTTGTA | + |
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Preference number: 3 (lower is better) Translates to: SGSRVLVIQARN*CALLHTNCTLV Trigger: TACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR GCA 72 bp | GAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTaGTACACACTAATTGTACACTTGTACAATTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: ESSLYKLVTAVL*YTLIVHLYNSA Trigger: AGCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAAGGCAACTTCTCTTGTaGTCACACACCTTTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QNQTNKSKWAVLGGHLISRQLLL*SHTFLR Trigger: CCTTAAAAAGGTGTGTGACAACAAGAGAAGTTGCCT...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR CCA 72 bp | TTGCTCAAGGTCCTAAAATCGGTTACTGGTGTTAAGTaGTGTTTGAATCTACTTAAATCTGGATCCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LLKVLKSVTGVK*CLNLLKSGSRV Trigger: GACTCTGGATCCAGATTTAAGTAGATTCAAACACCACTTAACACCAGTAACCGATTTTAGGACCTTGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCATACACAGAACCAAACATTCCCAACTTTACATTCGATTTGTTAGTCAGTAGGCAACTTCTCTTGTaGTCACACACCTTTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SAYTEPNIPNFTFDLLVSRQLLL*SHTFLR Trigger: CCTTAAAAAGGTGTGTGACAACAAGAGAAGTTGCCT...ACTGACTAACAAATCGAATGTAAAGTTGGGAATGTTTGGTTCTGTGTATGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 ENSMUST00000219334.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGAGGCAACTTCTCTTGTaGTCACACACCTTTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKRQLLL*SHTFLR Trigger: CCTTAAAAAGGTGTGTGACAACAAGAGAAGTTGCCT...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 ENSMUST00000219334.2 |
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| CDS-3UTR TCA 90 bp | TTTCCCTTTCCGTTCCTCTGCTTTTGCGCAGTGCTTGGGATAGAAGTCGGCCGCCCGAGGCCGACGGGATaGACGGGAGCACCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FPFPFLCFCAVLGIEVGRPRPTG*TGAPPP Trigger: AGGAGGAGGTGCTCCCGTTCATCCCGTCGGCCTCGG...GCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| CDS-3UTR TCA 90 bp | ATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCAAGTCATCCCGCTGCCGGTaGCCGTCTGCAGGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ICVPSLLCGARDGTWVFKSSRCR*PSAGRR Trigger: TCGCCTTCCTGCAGACGGTCACCGGCAGCGGGATGA...CTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAATCTGCAGCGTGGCACTaGAGACCCTGCGAACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQSAAWH*RPCEQK Trigger: CTTCTGTTCGCAGGGTCTTCAGTGCCACGCTGCAGA...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAGCTTCCAGTGCCTCCTaGGCATTCTTGACAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQASSAS*AFLTAP Trigger: TGGGGCTGTCAAGAATGCGCAGGAGGCACTGGAAGC...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTTTCCGTTCCTCTGCTTTTGCGCAGTGCTTGGGATAGAAGTCGGCCGCCTGAGCCTGAAGCCATaGGAGCAGTGTCTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPFPFLCFCAVLGIEVGRLSLKP*EQCLPD Trigger: ATCAGGGAGACACTGCTCTCATGGCTTCAGGCTCAG...GCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTTTCCGTTCCTCTGCTTTTGCGCAGTGCTTGGGATAGAAGTCGGCCGCGGTCTGCTTCAAAGGTaGCAGGAAACACGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPFPFLCFCAVLGIEVGRGLLQR*QETRWD Trigger: GTCCCAGCGTGTTTCCTGGCACCTTTGAAGCAGACC...GCGGCCGACTTCTATCCCAAGCACTGCGCAAAAGCAGAGGAACGGAAAGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCAAGGGTCTGCTTCAAAGGTaGCAGGAAACACGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICVPSLLCGARDGTWVFKGLLQR*QETRWD Trigger: GTCCCAGCGTGTTTCCTGGCACCTTTGAAGCAGACC...CTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTCTTCAAGATCCCACTGCGTGGTTaGGACTGTCTGCAAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ICVPSLLCGARDGTWVFKIPLRG*DCLQEM Trigger: CATCTCTTGCAGACAGTCTCAACCACGCAGTGGGAT...CTTGAAGACCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTGCTACACACGGAGGACGTCCTTTTaGAAGGGGCAGCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDPESSLYKLVTAVLCYTRRTSF*KGQLRA Trigger: AGCCCTCAGCTGCCCCTTGCAAAAGGACGTCCTCCG...TGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAATTTCCAACAGAACCTTaGACCTCTCCATCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQFPTEP*TSPSVV Trigger: CACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAA...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTAAATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGCTCAATAGCTTCCAGTaGCTCCTGCGCATTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVSPPCSVVLGMELGLNSFQ*LLRILD Trigger: GTCAAGAATGCGCAGGAGGCACTGGAAGCTATTGAG...CCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGATTTAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAATGTCTCTCTTCATCCTaGGCCATCATCAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQCLSSS*AIISFS Trigger: GGAAAAGCTGATGATGGCGCAGGATGAAGAGAGACA...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| 3UTR CAA 72 bp | ATTGACTGCAAGTCATCAACACACGGGTGGTCAGACTaGGTGCTTCTCAGCTTAATCCCAGCAGTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDCKSSTHGWSD*VLLSLIPAVGR Trigger: CCTCCCCACTGCTGGGATTAAGCTGAGAAGCACCAAGTCTGACCACCCGTGTGTTGATGACTTGCAGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTGCTACACACTGAGCCTGAAGCCATaGGAGCAGTGTCTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDPESSLYKLVTAVLCYTLSLKP*EQCLPD Trigger: ATCAGGGAGACACTGCTCTCATGGCTTCAGGCTCAG...TGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAACTGGCACAGCACTTCTaGATTCGTATACTGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQLAQHF*IRILVV Trigger: AACTACCAGTATACGAATTCAGAAGTGCTGTGCCAG...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTAAATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTTTCCAACAGAACCTTaGACCTCTCCATCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVSPPCSVVLGMELGFPTEP*TSPSVV Trigger: CACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAA...CCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGATTTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTATCATCCCGCTGCCGGTaGCCGTCTGCAGGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GERRLFVITPEKTWCISLSSRCR*PSAGRR Trigger: TCGCCTTCCTGCAGACGGTCACCGGCAGCGGGATGA...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGGCGCTCGCGAGCACACACACACCCACACACACACAAACTGCTTCTTTACTCAATAGCTTCCAGTaGCTCCTGCGCATTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WMALASTHTPTHTQTASLLNSFQ*LLRILD Trigger: GTCAAGAATGCGCAGGAGGCACTGGAAGCTATTGAG...TAAAGAAGCAGTTTGTGTGTGTGTGGGTGTGTGTGTGCTCGCGAGCGCCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAGGCCTGCTTATTTTCTaGGGGGTATTCACTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQGLLIF*GVFTVN Trigger: GTTAACAGTGAATACCCCGCAGAAAATAAGCAGGCC...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGTATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGATAGTAACCAGCACCTaGTCTACATTTTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRIKPWWQSTPATRDWDLIVTST*STFSAP Trigger: AGGTGCAGAAAATGTAGAGCAGGTGCTGGTTACTAT...CAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATACGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTAAATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTGCACTGCTCCCGCATaGTGTCTTTTATCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVSPPCSVVLGMELGCTAPA*CLLSVC Trigger: ACACACTGATAAAAGACACCATGCGGGAGCAGTGCA...CCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGATTTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGTAACTGCTGTGCTCTGCTACACACTAATTGTACACTTGTACAATTCTGCTTTGCAAGGGGCAGCTaGGGGCTGGCAGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNCCALLHTNCTLVQFCFARGS*GLAGRS Trigger: AGACCTTCCTGCCAGCCCTCAGCTGCCCCTTGCAAA...GCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAAAATACTGAGTAGAGAGCTCCACCAGCTTTaGGAGGATAATAAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: WQSTPATRDWDLAKILSRELHQL*EDNKTR Trigger: ACGTGTTTTATTATCCTCTCAAAGCTGGTGGAGCTC...TCTACTCAGTATTTTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTGCTACACAAGTGGGATGAACTCCTaGAGGTCTTTCGCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LDPESSLYKLVTAVLCYTSGMNS*RSFASQ Trigger: CTGTGAGGCGAAAGACCTCCAGGAGTTCATCCCACT...TGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGTTTGCAAGGGGCAGCTaGGGGCTGGCAGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKDYVLIVTPQLMCLHTQFARGS*GLAGRS Trigger: AGACCTTCCTGCCAGCCCTCAGCTGCCCCTTGCAAA...CTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGGCGCTCGCGAGCACACACACACCCACACACACACAAACTGCTTCTTTAATAGTAACCAGCACCTaGTCTACATTTTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WMALASTHTPTHTQTASLIVTST*STFSAP Trigger: AGGTGCAGAAAATGTAGAGCAGGTGCTGGTTACTAT...TAAAGAAGCAGTTTGTGTGTGTGTGGGTGTGTGTGTGCTCGCGAGCGCCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTATCTATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGTCCAACGCGGCCGACTaGTCGTTGTCTTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLSMKDYVLIVTPQLMCLSNAAD*SLSSAG Trigger: ACCAGCGGAAGACAACGACCAGTCGGCCGCGTTGGA...CAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATAGATAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | TATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACACTTGCCTCTGACGTGTaGACCACGTCCCGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YERLRFDCYPTAHVSAYTLASDV*TTSRST Trigger: GGTGGATCGGGACGTGGTTCACACGTCAGAGGCAAG...TGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039810.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGTCTGCAGCGTGGCACTaGAGACCCTGCGAACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MKDYVLIVTPQLMCLHTQSAAWH*RPCEQK Trigger: CTTCTGTTCGCAGGGTCTTCAGTGCCACGCTGCAGA...CTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | GCTATCTATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATGTGCTGGTAGGAGCTaGCTCCTGATGTCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AIYERLRFDCYPTAHVSACAGRS*LLMSPA Trigger: CGCTGGTGACATCAGGAGTCAGCTCCTACCAGCACA...TGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATAGATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCACTGATGAGCTGCTGCTaGGCAGTGCTTAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNQTNKSKWAVLGGHLISLMSCC*AVLSSE Trigger: CTCAGAACTAAGCACTGCTCAGCAGCAGCTCATCAG...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | GATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGAACCAACAGATGATCATCCGATaGAGGAAGGTCCGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: DYVLIVTPQLMCLHTQNQQMIIR*RKVRTP Trigger: TGGTGTGCGGACCTTCCTCCATCGGATGATCATCTG...TTGGTTCTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAAGTGGGATGAACTCCTaGAGGTCTTTCGCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GERRLFVITPEKTWCISLSGMNS*RSFASQ Trigger: CTGTGAGGCGAAAGACCTCCAGGAGTTCATCCCACT...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATACACAGAACCAAACATTCCCAACTTTACATTCGATTTGTTAGTCAGTTCCAACGCGGCCGACTaGTCGTTGTCTTCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAYTEPNIPNFTFDLLVSSNAAD*SLSSAG Trigger: ACCAGCGGAAGACAACGACCAGTCGGCCGCGTTGGA...ACTGACTAACAAATCGAATGTAAAGTTGGGAATGTTTGGTTCTGTGTATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGATCCCACTGCGTGGTTaGGACTGTCTGCAAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MKDYVLIVTPQLMCLHTQIPLRG*DCLQEM Trigger: CATCTCTTGCAGACAGTCTCAACCACGCAGTGGGAT...CTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAACTCAGGGCCCCGTTTaGGATGGATTGTTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNQTNKSKWAVLGGHLISTQGPV*DGLFSE Trigger: CTCTGAAAACAATCCATCTCAAACGGGGCCCTGAGT...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAACTCAGGGCCCCGTTTaGGATGGATTGTTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GERRLFVITPEKTWCISLTQGPV*DGLFSE Trigger: CTCTGAAAACAATCCATCTCAAACGGGGCCCTGAGT...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGTAACTGCTGTGCTCTGCTACACACTAATTGTACACTTGTACAATTCTGCGTGGTTGAGACTGTCTaGAAGAGATGCTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARNCCALLHTNCTLVQFCVVETV*KRCLSL Trigger: GAGAGACAAGCATCTCTTGCAGACAGTCTCAACCAC...GCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGCGGAGGACGTCCTTTTaGAAGGGGCAGCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKRRTSF*KGQLRA Trigger: AGCCCTCAGCTGCCCCTTGCAAAAGGACGTCCTCCG...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAAAAAACGGGGACACCTaGATCTTGAACTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GERRLFVITPEKTWCISLKNGDT*ILNLAV Trigger: CACGGCCAAGTTCAAGATGCAGGTGTCCCCGTTTTT...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAAAAAACGGGGACACCTaGATCTTGAACTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNQTNKSKWAVLGGHLISKNGDT*ILNLAV Trigger: CACGGCCAAGTTCAAGATGCAGGTGTCCCCGTTTTT...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAGAACCTCTCCATCAGTaGTGTCAGGAGGTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GERRLFVITPEKTWCISLEPLHQ*CQEVLH Trigger: ATGAAGGACCTCCTGACACCACTGATGGAGAGGTTC...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGTGTGCTGGTAGGAGCTaGCTCCTGATGTCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKCAGRS*LLMSPA Trigger: CGCTGGTGACATCAGGAGTCAGCTCCTACCAGCACA...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGGCTTCCAGTGCCTCCTaGGCATTCTTGACAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKASSAS*AFLTAP Trigger: TGGGGCTGTCAAGAATGCGCAGGAGGCACTGGAAGC...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | ATTATTTGGGTGCTTGCTTTTAAAAATCAGGTACTCAATGACGGAAAGGCTTCTCTGATGAGCTGCTGCTaGGCAGTGCTTAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIWVLAFKNQVLNDGKASLMSCC*AVLSSE Trigger: CTCAGAACTAAGCACTGCTCAGCAGCAGCTCATCAG...AGAAGCCTTTCCGTCATTGAGTACCTGATTTTTAAAAGCAAGCACCCAAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | GCTATCTATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCAGTGGTTGAGACTGTCTaGAAGAGATGCTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AIYERLRFDCYPTAHVSAVVETV*KRCLSL Trigger: GAGAGACAAGCATCTCTTGCAGACAGTCTCAACCAC...TGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATAGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| 3UTR CAA 72 bp | GTAACTGCTGTGCTCTGCTACACACTAATTGTACACTaGTACAATTCTGCTGTGTCCCACAGATGCTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: VTAVLCYTLIVH*YNSAVSHRCYY Trigger: GTAATAGCATCTGTGGGACACAGCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | GCTATCTATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCACTGGCACAGCACTTCTaGATTCGTATACTGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIYERLRFDCYPTAHVSALAQHF*IRILVV Trigger: AACTACCAGTATACGAATTCAGAAGTGCTGTGCCAG...TGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATAGATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTTGGGTGCTTGCTTTTAAAAATCAGGTACTCAATGACGGAAAGGCTTCTGAACCTCTCCATCAGTaGTGTCAGGAGGTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIWVLAFKNQVLNDGKASEPLHQ*CQEVLH Trigger: ATGAAGGACCTCCTGACACCACTGATGGAGAGGTTC...AGAAGCCTTTCCGTCATTGAGTACCTGATTTTTAAAAGCAAGCACCCAAATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | TATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAACTGTCTGCAAGAGATaGTTGTCTCTCTTCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YERLRFDCYPTAHVSAYTTVCKR*LSLFIL Trigger: CAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGT...TGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTTGGGTGCTTGCTTTTAAAAATCAGGTACTCAATGACGGAAAGGCTTCTTGCACTGCTCCCGCATaGTGTCTTTTATCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIWVLAFKNQVLNDGKASCTAPA*CLLSVC Trigger: ACACACTGATAAAAGACACCATGCGGGAGCAGTGCA...AGAAGCCTTTCCGTCATTGAGTACCTGATTTTTAAAAGCAAGCACCCAAATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| 3UTR CAA 72 bp | AAGGTCCTAAAATCGGTTACTGGTGTTAAGTGGTGTTaGAATCTACTTAAATCTGGATCCAGAGTCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLKSVTGVKWC*NLLKSGSRVLV Trigger: AACGAGGACTCTGGATCCAGATTTAAGTAGATTCAAACACCACTTAACACCAGTAACCGATTTTAGGACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR TCA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGGAGCTCCACCAGCTTTaGGAGGATAATAAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKELHQL*EDNKTR Trigger: ACGTGTTTTATTATCCTCTCAAAGCTGGTGGAGCTC...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR GCA 90 bp | CCCAACTTTACATTCGATTTGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAGACTGTCTGCAAGAGATaGTTGTCTCTCTTCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNFTFDLLVSFPLLHFIKTVCKR*LSLFIL Trigger: CAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGT...CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| 3UTR CAA 72 bp | TACACAGAACCAAACATTCCCAACTTTACATTCGATTaGTTAGTCAGTTTTCCACTGCTGCATTTTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTEPNIPNFTFD*LVSFPLLHFIK Trigger: CTTTATAAAATGCAGCAGTGGAAAACTGACTAACAAATCGAATGTAAAGTTGGGAATGTTTGGTTCTGTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 ENSMUST00000219334.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAATTCGCCTCACAGTCCTaGAGCATGTGCTCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQFASQS*SMCSEA Trigger: GGCCTCGGAGCACATGCTCAAGGACTGTGAGGCGAA...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAAATCTGTGTCCCCTCCCTGCTCTGTGGTGCTAGGGATGGAACTTGGGTGTTCTCCAAGCCACTaGCCTCTGACGTGTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SPKSVSPPCSVVLGMELGCSPSH*PLTCEP Trigger: TGGTTCACACGTCAGAGGCAAGTGGCTTGGAGAACA...CCCAAGTTCCATCCCTAGCACCACAGAGCAGGGAGGGGACACAGATTTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039810.8 |
||
| CDS GCA 90 bp | CTTGCTGGTTCGACTGGCGAATCCCACTGCGTGGTTGAGACTGTCTaGAAGAGATGCTTGTCTCTCTTCATCCTGCGCCATCATCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAGSTGESHCVVETV*KRCLSLFILRHHQL Trigger: AAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGCAGTGGGATTCGCCAGTCGAACCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 90 bp | CCTTGGATAATAGTAACCAGCACCTGCTCTACATTTTCTGCACCTTaGTTCGCGATCACTTCACTCATCCCGCTGCCGGTGACCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PWIIVTSTCSTFSAP*FAITSLIPLPVTVC Trigger: GCAGACGGTCACCGGCAGCGGGATGAGTGAAGTGATCGCGAATCAAGGTGCAGAAAATGTAGAGCAGGTGCTGGTTACTATTATCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | TGGATGGCGCTCGCGAGCACACACACACCCACACACACACAAACTGCTTCTTTAGCCTCCTGCGCATTCTaGACAGCCCCATTCTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: WMALASTHTPTHTQTASLASCAF*TAPFLI Trigger: AATTAAGAATGGGGCTGTCAAGAATGCGCAGGAGGC...TAAAGAAGCAGTTTGTGTGTGTGTGGGTGTGTGTGTGCTCGCGAGCGCCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAACCTTGGTGGCAGTCAACACCTGCAACCCGGGACTGGGACCTGGCCAACAAAACCCAATGATGTaGGAGGAAATGTCATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YQTLVAVNTCNPGLGPGQQNPMM*EEMSSS Trigger: GGACGATGACATTTCCTCCAACATCATTGGGTTTTG...TTGGCCAGGTCCCAGTCCCGGGTTGCAGGTGTTGACTGCCACCAAGGTTTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATCCAGAGTCCTCGTTATACAAGCTCGTAACTGCTGTGCTCTGCTACACATTGTTGCTGAAGGCCTaGCTGGTTCGACTGGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LDPESSLYKLVTAVLCYTLLLKA*LVRLAN Trigger: ATTCGCCAGTCGAACCAGCAAGGCCTTCAGCAACAA...TGTGTAGCAGAGCACAGCAGTTACGAGCTTGTATAACGAGGACTCTGGATCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 90 bp | GTCTCTCTTCATCCTGCGCCATCATCAGCTTTTCCAACAGAACCTTaGACCTCTCCATCAGTGGTGTCAGGAGGTCCTTCATTAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSLHPAPSSAFPTEP*TSPSVVSGGPSLRP Trigger: AGGCCTTAATGAAGGACCTCCTGACACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGAAGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS GCA 90 bp | GCGTGGTTGAGACTGTCTGCAAGAGATGCTTGTCTCTCTTCATCCTaGGCCATCATCAGCTTTTCCAACAGAACCTTGAACCTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AWLRLSARDACLSSS*AIISFSNRTLNLSI Trigger: GATGGAGAGGTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGTCGGAGGACGTCCTTTaGCAAGGGGCAGCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKDYVLIVTPQLMCLHTQSEDVL*QGAAEG Trigger: GCCCTCAGCTGCCCCTTGCAAAAGGACGTCCTCCGA...CTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTATTCGCCTCACAGTCCTaGAGCATGTGCTCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GERRLFVITPEKTWCISLFASQS*SMCSEA Trigger: GGCCTCGGAGCACATGCTCAAGGACTGTGAGGCGAA...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | TATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACATCGGAGGACGTCCTTTaGCAAGGGGCAGCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YERLRFDCYPTAHVSAYTSEDVL*QGAAEG Trigger: GCCCTCAGCTGCCCCTTGCAAAAGGACGTCCTCCGA...TGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCACAGATGCTATTACCTCTCCCACAGTGTACAGGAACATAGCAAAGCAACACTCAGGGCCCCGTTaGAGATGGATTGTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPTDAITSPTVYRNIAKQHSGPR*RWIVFR Trigger: TCTGAAAACAATCCATCTCAAACGGGGCCCTGAGTG...TTGCTTTGCTATGTTCCTGTACACTGTGGGAGAGGTAATAGCATCTGTGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAGTCTGCAAGAGATGCTaGTCTCTCTTCATCCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GERRLFVITPEKTWCISLVCKRC*SLFILR Trigger: GCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGAC...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAGTCTGCAAGAGATGCTaGTCTCTCTTCATCCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QNQTNKSKWAVLGGHLISVCKRC*SLFILR Trigger: GCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGAC...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | GATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGAACCAATTGTTGCTGAAGGCCTaGCTGGTTCGACTGGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DYVLIVTPQLMCLHTQNQLLLKA*LVRLAN Trigger: ATTCGCCAGTCGAACCAGCAAGGCCTTCAGCAACAA...TTGGTTCTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | GCTCGTAACTGCTGTGCTCTGCTACACACTAATTGTACACTTGTACAATTCTGCCACTCAGGGCCCCGTTaGAGATGGATTGTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARNCCALLHTNCTLVQFCHSGPR*RWIVFR Trigger: TCTGAAAACAATCCATCTCAAACGGGGCCCTGAGTG...GCAGAATTGTACAAGTGTACAATTAGTGTGTAGCAGAGCACAGCAGTTACGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAAAGGAGGCTCTTTGTAATAACTCCGGAAAAGACTTGGTGTATTTCACTAGCCTCCTGCGCATTCTaGACAGCCCCATTCTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: GERRLFVITPEKTWCISLASCAF*TAPFLI Trigger: AATTAAGAATGGGGCTGTCAAGAATGCGCAGGAGGC...TAGTGAAATACACCAAGTCTTTTCCGGAGTTATTACAAAGAGCCTCCTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 90 bp | CAGGAAGCTGTTTCAGGATATGGAGATAATCATAACAAAACCCAATaGTGTTGGAGGAAATGTCATCGTCCTCGTGAACTAGCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QEAVSGYGDNHNKTQ*CWRKCHRPRELAAA Trigger: AGCTGCTGCTAGTTCACGAGGACGATGACATTTCCTCCAACATCATTGGGTTTTGTTATGATTATCTCCATATCCTGAAACAGCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217865.2 |
||
| CDS-3UTR CAA 90 bp | GATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGAACCAACAAAACCCAATGATGTaGGAGGAAATGTCATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DYVLIVTPQLMCLHTQNQQNPMM*EEMSSS Trigger: GGACGATGACATTTCCTCCAACATCATTGGGTTTTG...TTGGTTCTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | CAAAACCAAACAAACAAATCCAAGTGGGCTGTGCTCGGAGGACATCTAATATCAATAGTCAACGGCTCCTaGGATAATAGTAACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QNQTNKSKWAVLGGHLISIVNGS*DNSNQH Trigger: GTGCTGGTTACTATTATCCAAGGAGCCGTTGACTAT...TGATATTAGATGTCCTCCGAGCACAGCCCACTTGGATTTGTTTGTTTGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 90 bp | CAGGAAGCTGTTTCAGGATATGGAGATAATCATAACAAAACCCAATaGTGTTGGAGGAAATGTCATCGTCCTCGTGAACTAGCAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QEAVSGYGDNHNKTQ*CWRKCHRPRELAAV Trigger: TACAGCTGCTAGTTCACGAGGACGATGACATTTCCTCCAACATCATTGGGTTTTGTTATGATTATCTCCATATCCTGAAACAGCTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGATTACGTTTTGATTGTTACCCCACAGCTCATGTGTCTGCATACACAGATAGTCAACGGCTCCTaGGATAATAGTAACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MKDYVLIVTPQLMCLHTQIVNGS*DNSNQH Trigger: GTGCTGGTTACTATTATCCAAGGAGCCGTTGACTAT...CTGTGTATGCAGACACATGAGCTGTGGGGTAACAATCAAAACGTAATCTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS-3UTR CAA 90 bp | ATTATTTGGGTGCTTGCTTTTAAAAATCAGGTACTCAATGACGGAAAGGCTTCTTTTTCCAACAGAACCTaGAACCTCTCCATCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IIWVLAFKNQVLNDGKASFSNRT*NLSISG Trigger: ACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAAA...AGAAGCCTTTCCGTCATTGAGTACCTGATTTTTAAAAGCAAGCACCCAAATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CCA 72 bp | GGGAGCACCTCCTCCTCGAGGCAGATGATCATCCGATaGAGGAAGGTCCGCACACCACTTCGGAGGACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSTSSSRQMIIR*RKVRTPLRRTS Trigger: GGACGTCCTCCGAAGTGGTGTGCGGACCTTCCTCCATCGGATGATCATCTGCCTCGAGGAGGAGGTGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 72 bp | CAGGGTCACAGACGTGTGCTGGTAGGAGCTGACTCCTaGTGTCACCAGCGTCCGCATCATGTCCTGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGHRRVLVGADS*CHQRPHHVLQS Trigger: GCTTTGCAGGACATGATGCGGACGCTGGTGACATCAGGAGTCAGCTCCTACCAGCACACGTCTGTGACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS GCA 72 bp | ACTTCAACCTCCATGAAGCGCGTGGTCTGCCAGTTCTaGAGCGTGGCACTGAAGACCCTGCGAACAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSTSMKRVVCQF*SVALKTLRTEA Trigger: GGCTTCTGTTCGCAGGGTCTTCAGTGCCACGCTGCAGAACTGGCAGACCACGCGCTTCATGGAGGTTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CAA 90 bp | TTGCTGAAGGCCTTGCTGGTTCGACTGGCGAATCCCACTGCGTGGTaGAGACTGTCTGCAAGAGATGCTTGTCTCTCTTCATCCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLKALLVRLANPTAW*RLSARDACLSSSCA Trigger: GGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGCAGTGGGATTCGCCAGTCGAACCAGCAAGGCCTTCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CAA 90 bp | ACTGGCGAATCCCACTGCGTGGTTGAGACTGTCTGCAAGAGATGCTaGTCTCTCTTCATCCTGCGCCATCATCAGCTTTTCCAACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TGESHCVVETVCKRC*SLFILRHHQLFQQN Trigger: GTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGCAGTGGGATTCGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS TCA 72 bp | CATCCTGCGCCATCATCAGCTTTTCCAACAGAACCTTaGACCTCTCCATCAGTGGTGTCAGGAGGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPAPSSAFPTEP*TSPSVVSGGPS Trigger: TGAAGGACCTCCTGACACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS GCA 72 bp | GAATCCCACTGCGTGGTTGAGACTGTCTGCAAGAGATaGTTGTCTCTCTTCATCCTGCGCCATCATCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESHCVVETVCKR*LSLFILRHHQL Trigger: AAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGCAGTGGGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CAA 72 bp | TCATCCTGCGCCATCATCAGCTTTTCCAACAGAACCTaGAACCTCTCCATCAGTGGTGTCAGGAGGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCAIISFSNRT*NLSISGVRRSF Trigger: GAAGGACCTCCTGACACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CAA 72 bp | TCCCACTGCGTGGTTGAGACTGTCTGCAAGAGATGCTaGTCTCTCTTCATCCTGCGCCATCATCAGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHCVVETVCKRC*SLFILRHHQLF Trigger: GAAAAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCTCAACCACGCAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
||
| CDS CAA 90 bp | TGTCTCTCTTCATCCTGCGCCATCATCAGCTTTTCCAACAGAACCTaGAACCTCTCCATCAGTGGTGTCAGGAGGTCCTTCATTAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: CLSSSCAIISFSNRT*NLSISGVRRSFIKA Trigger: GGCCTTAATGAAGGACCTCCTGACACCACTGATGGAGAGGTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGAAGAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| CDS TCA 72 bp | AACCCAATGATGTTGGAGGAAATGTCATCGTCCTCGTaGACTAGCAGCAGCTTAGAAAATCTGGCCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: NPMMLEEMSSSS*TSSSLENLATK Trigger: CTTCGTGGCCAGATTTTCTAAGCTGCTGCTAGTTCACGAGGACGATGACATTTCCTCCAACATCATTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217865.2 |
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| CDS GCA 72 bp | AGACTGTCTGCAAGAGATGCTTGTCTCTCTTCATCCTaGGCCATCATCAGCTTTTCCAACAGAACCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RLSARDACLSSS*AIISFSNRTLN Trigger: GTTCAAGGTTCTGTTGGAAAAGCTGATGATGGCGCAGGATGAAGAGAGACAAGCATCTCTTGCAGACAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| CDS GCA 72 bp | TTGGATAATAGTAACCAGCACCTGCTCTACATTTTCTaGACCTTGATTCGCGATCACTTCACTCATCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LDNSNQHLLYIF*TLIRDHFTHPA Trigger: AGCGGGATGAGTGAAGTGATCGCGAATCAAGGTGCAGAAAATGTAGAGCAGGTGCTGGTTACTATTATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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| CDS TCA 72 bp | AACCCAATGATGTTGGAGGAAATGTCATCGTCCTCGTaGACTAGCAGCTGTAACATAAGTGGCACTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: NPMMLEEMSSSS*TSSCNISGTFV Trigger: GACAAAAGTGCCACTTATGTTACAGCTGCTAGTTCACGAGGACGATGACATTTCCTCCAACATCATTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039810.8 ENSMUST00000218004.2 |
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