Pregenerated sensors for XPNPEP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022401Ensembl transcript IDs: ENSMUST00000041609.11, ENSMUST00000163754.9, ENSMUST00000165258.8
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGGACCCCTGTGTTTCCTGAGGCCTGAGAGATTCCAGTGGGTGTaGGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: AGPLCFLRPERFQWV*VCRTWTRRQRPWQV Trigger: TACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAAACACAGGGGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | AACACAGCAGGACCCCTGTGTTTCCTGAGGCCTGAGAGATTCCAGTaGGTGTGCGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGG | + |
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Preference number: 1 (lower is better) Translates to: NTAGPLCFLRPERFQ*VCVCRTWTRRQRPW Trigger: CCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAAACACAGGGGTCCTGCTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR TCA 90 bp | CTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCTaGGAGATTCCAGTGGGTGTGCGTGTGCAGAACCTGGACCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LAEWKHSRTPVFPEA*EIPVGVRVQNLDQE Trigger: CTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | GCGGGTAGGCTTCATCCACTCCGGTTAAGGCTATTGCTCCATCTGTaGCAGATCGAGGGCCATCCCACAATTCTCGGCCAGGATCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: AGRLHPLRLRLLLHL*QIEGHPTILGQDLS Trigger: GGAGAGATCCTGGCCGAGAATTGTGGGATGGCCCTCGATCTGGCACAGATGGAGCAATAGCCTTAACCGGAGTGGATGAAGCCTACCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR CCA 90 bp | CAGTGGGTGTGCGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATaGCAAGTAAGTATTGGCCACCTCAAACGCCGACAGGTAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: QWVCVCRTWTRRQRP*QVSIGHLKRRQVAI Trigger: AATGGCTACCTGTCGGCGTTTGAGGTGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | TTCCTGAGGCCTGAGAGATTCCAGTGGGTGTGCGTGTGCAGAACCTaGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCACCTC | + |
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Preference number: 1 (lower is better) Translates to: FLRPERFQWVCVCRT*TRRQRPWQVSIGHL Trigger: GAGGTGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | CCCCTGTGTTTCCTGAGGCCTGAGAGATTCCAGTGGGTGTGCGTGTaGAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATT | + |
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Preference number: 1 (lower is better) Translates to: PLCFLRPERFQWVCV*RTWTRRQRPWQVSI Trigger: AATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAAACACAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | GTTACTCACCCGCTCAGTGAGTCTTACTGTATGTGCTGGTGCACCTaGAATCCCAGCAAGACCAGCCTGGCCACACATCTGAGGCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: VTHPLSESYCMCWCT*NPSKTSLATHLRQL Trigger: CAGCTGCCTCAGATGTGTGGCCAGGCTGGTCTTGCTGGGATTCCAGGTGCACCAGCACATACAGTAAGACTCACTGAGCGGGTGAGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | AGCTCCTCAGTGGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCTaGAGTGTTGCGAACATACACGATGACATCACCACCTTCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: SSSVATEAPSPCGFC*SVANIHDDITTFSP Trigger: TGGTGAGAAGGTGGTGATGTCATCGTGTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCACTGAGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | GCCTTAGGCGCTGTATCAGCTGCTGGACACTCCGAACCTTGTTCTTaGTCCTGGCTTTGGCTTCAGTTAGAGGCTGCATGTAGTCAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: ALGAVSAAGHSEPCS*SWLWLQLEAACSQS Trigger: ACTCTGACTACATGCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR GCA 90 bp | CAAAGCTCCTCAGTGGCTACAGAAGCCCCCTCCCCATGTGGATTCTaGTGCAGTGTTGCGAACATACACGATGACATCACCACCTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: QSSSVATEAPSPCGF*CSVANIHDDITTFS Trigger: TGAGAAGGTGGTGATGTCATCGTGTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCACTGAGGAGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | TCCCCAGAGACACTGACTACCTGCATAGCAGGGATGCCACAGTGGTaGTCACGAGGTCCTGCTGCAGATCTGTTCAATGTCATTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: SPETLTTCIAGMPQW*SRGPAADLFNVIHL Trigger: GAGATGAATGACATTGAACAGATCTGCAGCAGGACCTCGTGACCACCACTGTGGCATCCCTGCTATGCAGGTAGTCAGTGTCTCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
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| 3UTR CCA 90 bp | TCTGCCTCCCAAGTGTTGGGATTTAAGGCATGCGCCACCACCGCCTaGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTAC | + |
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Preference number: 1 (lower is better) Translates to: SASQVLGFKACATTA*LYRVLYDTISLGIY Trigger: GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGTGGCGCATGCCTTAAATCCCAACACTTGGGAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | CACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTTCTCTaGGGCATCTCTGTCGTCCTCTGGGATATAAATGCCTGGTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: HYIILNPNSEPSELL*GISVVLWDINAWFN Trigger: GTTGAACCAGGCATTTATATCCCAGAGGACGACAGAGATGCCCCAGAGAAGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
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| 3UTR CCA 90 bp | CATCCCACAATTCTCGGCCAGGATCTCTCCGAGGCACAAAAAGCATaGCCTTATGGGATGGTAACTGCTTCCCAGAGAAGCTCTGAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: HPTILGQDLSEAQKA*PYGMVTASQRSSEG Trigger: TCCTTCAGAGCTTCTCTGGGAAGCAGTTACCATCCCATAAGGCCATGCTTTTTGTGCCTCGGAGAGATCCTGGCCGAGAATTGTGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR CCA 90 bp | GGCGCTGTATCAGCTGCTGGACACTCCGAACCTTGTTCTTGCTCCTaGCTTTGGCTTCAGTTAGAGGCTGCATGTAGTCAGAGTGAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: GAVSAAGHSEPCSCS*LWLQLEAACSQSEV Trigger: AACTTCACTCTGACTACATGCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR GCA 90 bp | TACCTGCATAGCAGGGATGCCACAGTGGTGGTCACGAGGTCCTGCTaGAGATCTGTTCAATGTCATTCATCTCTTTGGGACAATCTGCAG | + |
|
Preference number: 1 (lower is better) Translates to: YLHSRDATVVVTRSC*RSVQCHSSLWDNLQ Trigger: CTGCAGATTGTCCCAAAGAGATGAATGACATTGAACAGATCTGCAGCAGGACCTCGTGACCACCACTGTGGCATCCCTGCTATGCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
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| 3UTR CCA 90 bp | ATCTCTGAAGGAGACTTAACCAGCCTTAGGCGCTGTATCAGCTGCTaGACACTCCGAACCTTGTTCTTGCTCCTGGCTTTGGCTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: ISEGDLTSLRRCISC*TLRTLFLLLALASV Trigger: AACTGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCTGGTTAAGTCTCCTTCAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR TCA 90 bp | TTCATCTCTTTGGGACAATCTGCAGAAAGGATAAGAGGTGAGTCCTaGGTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: FISLGQSAERIRGES*VTTTSSSIRTPSPR Trigger: CCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCTGCAGATTGTCCCAAAGAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
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| 3UTR GCA 90 bp | TTAATCTCTGAAGGAGACTTAACCAGCCTTAGGCGCTGTATCAGCTaGTGGACACTCCGAACCTTGTTCTTGCTCCTGGCTTTGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LISEGDLTSLRRCIS*WTLRTLFLLLALAS Trigger: TGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCTGGTTAAGTCTCCTTCAGAGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR CCA 90 bp | GCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTaGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: ARKIQDSCWLTVAVF*LNGNTAGPLCFLRP Trigger: AGGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | ACCACCACTGTGTGGTCTGTTCCACTGTGCCCTTGTGCTTCTTTGTaGACCAGAGCCATAAGTTTATGTCTTCGAAGTGCATATTCCACC | + |
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Preference number: 1 (lower is better) Translates to: TTTVWSVPLCPCASL*TRAISLCLRSAYST Trigger: GGTGGAATATGCACTTCGAAGACATAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACACAGTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR TCA 90 bp | AAAAGCATGGCCTTATGGGATGGTAACTGCTTCCCAGAGAAGCTCTaGAGGACCAGAATGCTATCAGGCTCTTGGAATCCACAGAGATAC | + |
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Preference number: 1 (lower is better) Translates to: KSMALWDGNCFPEKL*RTRMLSGSWNPQRY Trigger: GTATCTCTGTGGATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAAGCAGTTACCATCCCATAAGGCCATGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR TCA 90 bp | TGGACCAGAGCCATAAGTTTATGTCTTCGAAGTGCATATTCCACCTaGGATAGCCCTGGTGTCACCTCCCCTTACAGCTTTGAAAAACTC | + |
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Preference number: 1 (lower is better) Translates to: WTRAISLCLRSAYST*DSPGVTSPYSFEKL Trigger: GAGTTTTTCAAAGCTGTAAGGGGAGGTGACACCAGGGCTATCTCAGGTGGAATATGCACTTCGAAGACATAAACTTATGGCTCTGGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR GCA 90 bp | TGTCAGCTACCTGCACTGCAGAGACTGTTTGCTAATCTTCTAGCTTaGACTTCCCTAACAGAAATATGGAAAGTAGGGGCAGATCCCACA | + |
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Preference number: 1 (lower is better) Translates to: CQLPALQRLFANLLA*TSLTEIWKVGADPT Trigger: TGTGGGATCTGCCCCTACTTTCCATATTTCTGTTAGGGAAGTGCAAGCTAGAAGATTAGCAAACAGTCTCTGCAGTGCAGGTAGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR TCA 90 bp | AATGTCATTCATCTCTTTGGGACAATCTGCAGAAAGGATAAGAGGTaGGTCCTGAGTCACCACTACATCATCCTCAATCCGAACTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: NVIHLFGTICRKDKR*VLSHHYIILNPNSE Trigger: CTCGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCTGCAGATTGTCCCAAAGAGATGAATGACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
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| 3UTR TCA 90 bp | AGTTCTCACACTACCTTTGTCCCCTGCTGGTTTCTAGGTGTACTGTaGAATTTCTTAAGATGTGTCAGCTACCTGCACTGCAGAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: SSHTTFVPCWFLGVL*NFLRCVSYLHCRDC Trigger: ACAGTCTCTGCAGTGCAGGTAGCTGACACATCTTAAGAAATTTCACAGTACACCTAGAAACCAGCAGGGGACAAAGGTAGTGTGAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR TCA 90 bp | TGCCTGGGTGCAGTCCCTTTGTTACAGGAGACATATACCAGATTCTaGACTAATCACATAAAACCATGTGACACTGGGTACCAGATAGGG | + |
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Preference number: 1 (lower is better) Translates to: CLGAVPLLQETYTRF*TNHIKPCDTGYQIG Trigger: CCCTATCTGGTACCCAGTGTCACATGGTTTTATGTGATTAGTTCAGAATCTGGTATATGTCTCCTGTAACAAAGGGACTGCACCCAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | CAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTaGTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QSNGKKDPRLLLADC*CILAEWKHSRTPVF Trigger: AAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR TCA 90 bp | AACTCTGCTATACATAAAAGCGGCCCAGGCTTTCAGCTACAAAGGTaGGAACTGCAGACGACGTTGTCTTACAGAAAGAAAGGAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: NSAIHKSGPGFQLQR*ELQTTLSYRKKGKS Trigger: TGACTTTCCTTTCTTTCTGTAAGACAACGTCGTCTGCAGTTCTCACCTTTGTAGCTGAAAGCCTGGGCCGCTTTTATGTATAGCAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | TTCAGTCTTGTAAGTGCCATGGTTTTAGGTGTGAGCTACAATGCCTaGGTGCAGTCCCTTTGTTACAGGAGACATATACCAGATTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: FSLVSAMVLGVSYNA*VQSLCYRRHIPDSE Trigger: TTCAGAATCTGGTATATGTCTCCTGTAACAAAGGGACTGCACCCAGGCATTGTAGCTCACACCTAAAACCATGGCACTTACAAGACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | CACATGCACAAAACACTAACTCTAGAAACACGATGTGTAGTAAGTTaGCCTGTGAGTAAGTTACTCACCCGCTCAGTGAGTCTTACTGTA | + |
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Preference number: 1 (lower is better) Translates to: HMHKTLTLETRCVVS*PVSKLLTRSVSLTV Trigger: TACAGTAAGACTCACTGAGCGGGTGAGTAACTTACTCACAGGGCAACTTACTACACATCGTGTTTCTAGAGTTAGTGTTTTGTGCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR TCA 90 bp | TACATTAATGATGCAGCCATCTCTCTCCAATCTAGGAAAGAGAATTaGGCTGAGGATGTAGTTCATTCAGAGGTGCAGAGCTTATTTAGC | + |
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Preference number: 1 (lower is better) Translates to: YINDAAISLQSRKEN*AEDVVHSEVQSLFS Trigger: GCTAAATAAGCTCTGCACCTCTGAATGAACTACATCCTCAGCTCAATTCTCTTTCCTAGATTGGAGAGAGATGGCTGCATCATTAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | AGACTGTTTGCTAATCTTCTAGCTTGCACTTCCCTAACAGAAATATaGAAAGTAGGGGCAGATCCCACAAAACCCTTGGATTTATGTTGT | + |
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Preference number: 1 (lower is better) Translates to: RLFANLLACTSLTEI*KVGADPTKPLDLCC Trigger: ACAACATAAATCCAAGGGTTTTGTGGGATCTGCCCCTACTTTCCATATTTCTGTTAGGGAAGTGCAAGCTAGAAGATTAGCAAACAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR GCA 90 bp | TTTCATTTTCTTTCCAAGAAGAACCTAGACACTTTCCATGTTCTGTaGAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: FHFLSKKNLDTFHVL*NQMARKIQDSCWLT Trigger: AGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGAACATGGAAAGTGTCTAGGTTCTTCTTGGAAAGAAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR CCA 90 bp | GCAGTATGCATTGATTTTGACAATACATGGCTGCAAGTAGCTACATaGATCAATTCATTAAGAACCTATAAAGAACTGAGTGGTGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: AVCIDFDNTWLQVAT*INSLRTYKELSGGR Trigger: TCTACCACCACTCAGTTCTTTATAGGTTCTTAATGAATTGATCCATGTAGCTACTTGCAGCCATGTATTGTCAAAATCAATGCATACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCAGGGATGCCACAGTGGTaGTCACGAGGTCCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RVQNLDQEAEAMASKYWPGMPQW*SRGPAA Trigger: TGCAGCAGGACCTCGTGACCACCACTGTGGCATCCC...TGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
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| 3UTR-3UTR CCA 90 bp | CGCCTGCAACCACAGGTGGGTAGGCTAAGATGTCGGCACCTCGAGCACGGCACTAGTACCACCACTGTGTaGTCTGTTCCACTGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RLQPQVGRLRCRHLEHGTSTTTV*SVPLCP Trigger: AGGGCACAGTGGAACAGACCACACAGTGGTGGTACT...AGTGCCGTGCTCGAGGTGCCGACATCTTAGCCTACCCACCTGTGGTTGCAGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGTGCGTGTGCAGAACCTaGACCAGGAGGCAGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRQISEFKVNLANRSSSRCVCRT*TRRQRP Trigger: TGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCA...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR-3UTR GCA 90 bp | CACATAGTGCAAAGTGTTGGAGCGATTACCGCCTGCAACCACAGGTGGGTAGGCAGGCGCTGTATCAGCTaGTGGACACTCCGAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: HIVQSVGAITACNHRWVGRRCIS*WTLRTL Trigger: CAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCT...GCCTACCCACCTGTGGTTGCAGGCGGTAATCGCTCCAACACTTTGCACTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR CAA 90 bp | GAAATTCTTCCAGCGGGTAGGCTTCATCCACTCCGGTTAAGGCTATaGCTCCATCTGTGCCAGATCGAGGGCCATCCCACAATTCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: EILPAGRLHPLRLRL*LHLCQIEGHPTILG Trigger: GCCGAGAATTGTGGGATGGCCCTCGATCTGGCACAGATGGAGCAATAGCCTTAACCGGAGTGGATGAAGCCTACCCGCTGGAAGAATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| 3UTR CAA 90 bp | CAGTGGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCTGCAGTGTaGCGAACATACACGATGACATCACCACCTTCTCACCACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QWLQKPPPHVDSAAV*RTYTMTSPPSHHQE Trigger: TTCCTGGTGGTGAGAAGGTGGTGATGTCATCGTGTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCCCTGTGAGTAAGTTACTCACCCGCTCAGTGAGTCTTACTGTATGTGCTACTGGCCCCAAGGATTaGGGCCAGGGGAGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: SCPVSKLLTRSVSLTVCATGPKD*GQGSHH Trigger: GTGGTGACTCCCCTGGCCTCAATCCTTGGGGCCAGT...AGCACATACAGTAAGACTCACTGAGCGGGTGAGTAACTTACTCACAGGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CAA 90 bp | GTAGAGCTTAAACTCAGAGGTGTGCCCTATGAGCGAGCGCTGGGATaGAAGGTGTGTGCTGTCACCTCCTGGCTTGGTAAGTGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VELKLRGVPYERALG*KVCAVTSWLGKWCF Trigger: AAAGCACCACTTACCAAGCCAGGAGGTGACAGCACACACCTTCAATCCCAGCGCTCGCTCATAGGGCACACCTCTGAGTTTAAGCTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGTGACTTGCTCTGCAGACCAGGCTGCTCTGGGCCTTGACCCTATGACCCACAAGCATCTTAAGTaGATCTCAGAAGAAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VAVTCSADQAALGLDPMTHKHLK*ISEEVQ Trigger: CTGCACTTCTTCTGAGATCCACTTAAGATGCTTGTG...GGTCATAGGGTCAAGGCCCAGAGCAGCCTGGTCTGCAGAGCAAGTCACAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| 3UTR-3UTR CCA 90 bp | ACCACCGCCTGGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTACGTCAGGCAGTTTCACTaGCCCCAAGGATTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TTAWLYRVLYDTISLGIYVRQFH*PQGLRP Trigger: TGGCCTCAATCCTTGGGGCCAGTGAAACTGCCTGAC...GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CAA 90 bp | GGGCAGCCGCCACTGTTACAGCCCTCAGGAGAGACTGATAAGGCCTaGAGGATGAGTAGTCAGAGGGCCATTTGTGTCCTAATGTTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GQPPLLQPSGETDKA*RMSSQRAICVLMFS Trigger: ACTAAACATTAGGACACAAATGGCCCTCTGACTACTCATCCTCAAGGCCTTATCAGTCTCTCCTGAGGGCTGTAACAGTGGCGGCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTTAGGCGCTGTATCAGCTGCTGGACACTCCGAACCTTGTTCTTGCTCCTGATAAGAGGTGAGTCCTaGGTCACCACTACATCATCC | + |
|
Preference number: 2 (lower is better) Translates to: SLRRCISCWTLRTLFLLLIRGES*VTTTSS Trigger: GGATGATGTAGTGGTGACTCAGGACTCACCTCTTAT...CAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACCTGGCCAACAGATCGAGTTCCAGGATAGTCAGAGCTACACAGAGAAACGTGTTTCCTGAGGCCTaGGAGATTCCAGTGGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VNLANRSSSRIVRATQRNVFPEA*EIPVGV Trigger: CACACCCACTGGAATCTCTCAGGCCTCAGGAAACAC...GTTTCTCTGTGTAGCTCTGACTATCCTGGAACTCGATCTGTTGGCCAGGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTGGCTGCAGTGGGTGTGCGTGTaGAGAACCTGGACCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MARKIQDSCWLTVAVFWLQWVCV*RTWTRR Trigger: CCTCCTGGTCCAGGTTCTGCACACGCACACCCACTG...CAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGCATCATGCTGTAGATGTTCTCCAAGCTCGTCCCAGGGGAACACAGAGTCAAAGCTTCATAGAGCTCTaGCTGAGGGGCGGTGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: QHHAVDVLQARPRGTQSQSFIEL*LRGGES Trigger: AGATTCACCGCCCCTCAGGCAGAGCTCTATGAAGCT...TTGACTCTGTGTTCCCCTGGGACGAGCTTGGAGAACATCTACAGCATGATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCTGCAGTGTTGCGAACATACGCTCACCTTGCAATCTaGGTTGTACAACTGAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: WLQKPPPHVDSAAVLRTYAHLAI*VVQLNQ Trigger: CTGGTTCAGTTGTACAACCCAGATTGCAAGGTGAGC...GTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCTGAGTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTAGAAAGGATAAGAGGTaGGTCCTGAGTCACCACTAC | + |
|
Preference number: 2 (lower is better) Translates to: SPESPLHHPQSELRALGTRKDKR*VLSHHY Trigger: GTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCT...AGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTTCTCTGGGAGGCTGAAACTTTGGTaGGAAGTAAAACATGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTTTSSSIRTPSPRNFSGRLKLW*EVKHVG Trigger: GCCCACATGTTTTACTTCTCACCAAAGTTTCAGCCT...CCCAGAGAAGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGTTGCTGTATTCTGGCTaGATGGAAACACAGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RRQISEFKVNLANRSSSRLLYSG*METQQD Trigger: GTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAA...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAGAGAAGCTCTGAAGGACCAGAATGCTATCAGGCTCTTGGAATCCACAGAAGTGCATATTCCACCTaGGATAGCCCTGGTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: SQRSSEGPECYQALGIHRSAYST*DSPGVT Trigger: GGTGACACCAGGGCTATCTCAGGTGGAATATGCACT...TCTGTGGATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCACCGCCTGGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTACTACTCACCCGCTCAGTaGGTCTTACTGTATGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TTAWLYRVLYDTISLGIYYSPAQ*VLLYVL Trigger: CAGCACATACAGTAAGACTCACTGAGCGGGTGAGTA...GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR GCA 90 bp | GATGTCGGCACCTCGAGCACGGCACTCAAATTCAAACTTCGCGTAAAGAAAGGCTGGTCTGTTCCACTGTaGCCTTGTGCTTCTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: DVGTSSTALKFKLRVKKGWSVPL*PCASLW Trigger: CCACAAAGAAGCACAAGGGCACAGTGGAACAGACCA...GCCTTTCTTTACGCGAAGTTTGAATTTGAGTGCCGTGCTCGAGGTGCCGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGTTGTTGGCTGACTGTTaGTGTATTCTGGCTGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: RRQISEFKVNLANRSSSRLLADC*CILAEW Trigger: CCATTCAGCCAGAATACAGCAACAGTCAGCCAACAA...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGGCTAAGATGTCGGCACCTCGAGCACGGCACTCAAATTCAAACTTCGCGTTCTGAAGGACCAGAATaGTATCAGGCTCTTGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: GRLRCRHLEHGTQIQTSRSEGPE*YQALGI Trigger: GATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGA...ACGCGAAGTTTGAATTTGAGTGCCGTGCTCGAGGTGCCGACATCTTAGCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCGCCTGGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTACATGCTTGGCTTAATCTaGGACTCAATGGGTAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTAWLYRVLYDTISLGIYMLGLI*DSMGSR Trigger: CCTGCTACCCATTGAGTCCCAGATTAAGCCAAGCAT...GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCGACCCCTGTGTTTCCTaGGGCCTGAGAGATTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SVQSNGKKDPRLLLADCCDPCVS*GLRDSS Trigger: ACTGGAATCTCTCAGGCCTCAGGAAACACAGGGGTC...GCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGACAGAGCTGGATCTGTaGAGACACATAGATACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RRQISEFKVNLANRSSSRTELDL*RHIDTF Trigger: GAAAGTATCTATGTGTCTCCACAGATCCAGCTCTGT...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTTCTCTGGGGTCAAACAAGCTCTTTaGATTTCCAGAACAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VTTTSSSIRTPSPRNFSGVKQAL*ISRTAS Trigger: TGAAGCTGTTCTGGAAATCCAAAGAGCTTGTTTGAC...CCCAGAGAAGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CAA 90 bp | AGTACCACCACTGTGTGGTCTGTTCCACTGTGCCCTTGTGCTTCTTaGTGGACCAGAGCCATAAGTTTATGTCTTCGAAGTGCATATTCC | + |
|
Preference number: 2 (lower is better) Translates to: STTTVWSVPLCPCAS*WTRAISLCLRSAYS Trigger: GGAATATGCACTTCGAAGACATAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACACAGTGGTGGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CAA 90 bp | CTGCTTCCCAGAGAAGCTCTGAAGGACCAGAATGCTATCAGGCTCTaGGAATCCACAGAGATACAGGAAGTTGTTGTCTTGATGGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: LLPREALKDQNAIRL*ESTEIQEVVVLMEC Trigger: ACATTCCATCAAGACAACAACTTCCTGTATCTCTGTGGATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACGGTTTACTGGGAAGCTaGGTCAGGCAGTTTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: STLQLSLDTPQEGIRFYYGLLGS*VRQFHW Trigger: CCAGTGAAACTGCCTGACTCAGCTTCCCAGTAAACC...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAGGCTTCATCCAGTCATACCAAACCATGTTCGTCTCAGCTCTCAGTTTTGTTCCCAGAGAAGCTCTaGAGGACCAGAATGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: EKASSSHTKPCSSQLSVLFPEKL*RTRMLS Trigger: TGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAA...CAAAACTGAGAGCTGAGACGAACATGGTTTGGTATGACTGGATGAAGCCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCTTGAAATGTGTTAACTaGAATGCAGGGACACATAAC | + |
|
Preference number: 2 (lower is better) Translates to: CCILAEWKHSRTPVFPEALKCVN*NAGTHN Trigger: GTTATGTGTCCCTGCATTCCAGTTAACACATTTCAA...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCAAGCTCGTCCCAGGGGAACACAGAGTCAAACAAGCTCTTTGGATTTCCACTCCCCTTACAGCTTTaGAAAACTCTGATTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SPSSSQGNTESNKLFGFPLPLQL*KTLISC Trigger: ACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAG...TGGAAATCCAAAGAGCTTGTTTGACTCTGTGTTCCCCTGGGACGAGCTTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACTGTTGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCTGTCATTCATCTCTTTaGGACAATCTGCAGAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTVAVFWLNGNTAGPLCFCHSSL*DNLQKG Trigger: TCCTTTCTGCAGATTGTCCCAAAGAGATGAATGACA...GAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATTACAGGCACTAGTCACTATGCCCATTCTGAGTTTGTCATGCTTTTGTATAAGAGGTGAGTCCTaGGTCACCACTACATCATCC | + |
|
Preference number: 2 (lower is better) Translates to: AELQALVTMPILSLSCFCIRGES*VTTTSS Trigger: GGATGATGTAGTGGTGACTCAGGACTCACCTCTTAT...ACAAAAGCATGACAAACTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR-3UTR TCA 90 bp | TTACCATGGGACTACACATACTCAGATTTAAAAGAAGTTTACACACTAGCTCTTAGCCATGAGTGGCTGTaGCTTGCTCTGCAGACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPWDYTYSDLKEVYTLALSHEWL*LALQTR Trigger: CCTGGTCTGCAGAGCAAGTCACAGCCACTCATGGCT...AAGAGCTAGTGTGTAAACTTCTTTTAAATCTGAGTATGTGTAGTCCCATGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACTGTATTCTGGCTGAATaGAAACACAGCAGGACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: STLQLSLDTPQEGIRFYYCILAE*KHSRTP Trigger: AGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACA...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACACAGAGTCAAACAAGCTCTTTGGATTTCCAGAACAGCTTCATAGAGCTAAAAGCATGGCCTTATaGGATGGTAACTGCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GNTESNKLFGFPEQLHRAKSMAL*DGNCFP Trigger: TGGGAAGCAGTTACCATCCCATAAGGCCATGCTTTT...AGCTCTATGAAGCTGTTCTGGAAATCCAAAGAGCTTGTTTGACTCTGTGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACTCCATCAAAGCCACCCTAACCACCAGTTACATCTGCAGAACTTGACTGTATTGAAATGTGTTAACTaGAATGCAGGGACACATAAC | + |
|
Preference number: 2 (lower is better) Translates to: QLHQSHPNHQLHLQNLTVLKCVN*NAGTHN Trigger: GTTATGTGTCCCTGCATTCCAGTTAACACATTTCAA...TACAGTCAAGTTCTGCAGATGTAACTGGTGGTTAGGGTGGCTTTGATGGAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACCATCTCACCATCCTTGATGAGTTGATTATTCTTCACATAGTGCAAAGTAGAAAGGATAAGAGGTaGGTCCTGAGTCACCACTAC | + |
|
Preference number: 2 (lower is better) Translates to: KNHLTILDELIILHIVQSRKDKR*VLSHHY Trigger: GTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCT...ACTTTGCACTATGTGAAGAATAATCAACTCATCAAGGATGGTGAGATGGTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCAGATCTGTTCAATGTCATTCATCTCTTTGGGACAATCTGCAGAAAGGATGAACCTATAAAGAACTaGGTGGTGGTAGATAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: AADLFNVIHLFGTICRKDEPIKN*VVVDNA Trigger: AGCATTATCTACCACCACTCAGTTCTTTATAGGTTC...ATCCTTTCTGCAGATTGTCCCAAAGAGATGAATGACATTGAACAGATCTGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR-3UTR TCA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACGAACCTATAAAGAACTaGGTGGTGGTAGATAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: STLQLSLDTPQEGIRFYYEPIKN*VVVDNA Trigger: AGCATTATCTACCACCACTCAGTTCTTTATAGGTTC...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTCGCGTAAAGAAAGGCTTCATCTATCGGAGCTTTACTGGCAAACATGGTAGCTTCCCAGCAATCTaGATTCTCTTAATCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KLRVKKGFIYRSFTGKHGSFPAI*ILLISE Trigger: TTCAGAGATTAAGAGAATGCAGATTGCTGGGAAGCT...ACCATGTTTGCCAGTAAAGCTCCGATAGATGAAGCCTTTCTTTACGCGAAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCCTGCAACCACAGGTGGGTAGGCTAAGATGTCGGCACCTCGAGCACGGCACTTGTTCCACTGTGCCCTaGTGCTTCTTTGTGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLQPQVGRLRCRHLEHGTCSTVP*CFFVDQ Trigger: CTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACA...AGTGCCGTGCTCGAGGTGCCGACATCTTAGCCTACCCACCTGTGGTTGCAGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CCA 72 bp | TGCGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATaGCAAGTAAGTATTGGCCACCTCAAACGCCGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CVCRTWTRRQRP*QVSIGHLKRRQ Trigger: CTGTCGGCGTTTGAGGTGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | TGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCTaGGAGATTCCAGTGGGTGTGCGTGTGCAGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WKHSRTPVFPEA*EIPVGVRVQNL Trigger: CAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | ACTCACCCGCTCAGTGAGTCTTACTGTATGTGCTGGTaGACCTGGAATCCCAGCAAGACCAGCCTGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: THPLSESYCMCW*TWNPSKTSLAT Trigger: TGTGGCCAGGCTGGTCTTGCTGGGATTCCAGGTGCACCAGCACATACAGTAAGACTCACTGAGCGGGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | CCGCTCAGTGAGTCTTACTGTATGTGCTGGTGCACCTaGAATCCCAGCAAGACCAGCCTGGCCACACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSESYCMCWCT*NPSKTSLATHL Trigger: CAGATGTGTGGCCAGGCTGGTCTTGCTGGGATTCCAGGTGCACCAGCACATACAGTAAGACTCACTGAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | GTTACTCACCCGCTCAGTGAGTCTTACTGTATGTGCTaGTGCACCTGGAATCCCAGCAAGACCAGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTHPLSESYCMC*CTWNPSKTSLA Trigger: GGCCAGGCTGGTCTTGCTGGGATTCCAGGTGCACCAGCACATACAGTAAGACTCACTGAGCGGGTGAGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | AACTCAGAGGTGTGCCCTATGAGCGAGCGCTGGGATTaGAGGTGTGTGCTGTCACCTCCTGGCTTGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NSEVCPMSERWD*RCVLSPPGLVS Trigger: ACTTACCAAGCCAGGAGGTGACAGCACACACCTTCAATCCCAGCGCTCGCTCATAGGGCACACCTCTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | CTTCATCCACTCCGGTTAAGGCTATTGCTCCATCTGTaGCAGATCGAGGGCCATCCCACAATTCTCGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LHPLRLRLLLHL*QIEGHPTILGQ Trigger: CTGGCCGAGAATTGTGGGATGGCCCTCGATCTGGCACAGATGGAGCAATAGCCTTAACCGGAGTGGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | GTGGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCTaGAGTGTTGCGAACATACACGATGACATCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: VATEAPSPCGFC*SVANIHDDITT Trigger: GGTGGTGATGTCATCGTGTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | CCTGAGAGATTCCAGTGGGTGTGCGTGTGCAGAACCTaGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: PERFQWVCVCRT*TRRQRPWQVSI Trigger: AATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACGCACACCCACTGGAATCTCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | GAAGGAGACTTAACCAGCCTTAGGCGCTGTATCAGCTaGTGGACACTCCGAACCTTGTTCTTGCTCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EGDLTSLRRCIS*WTLRTLFLLLA Trigger: AGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCTGGTTAAGTCTCCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | TCAGTGGCTACAGAAGCCCCCTCCCCATGTGGATTCTaGTGCAGTGTTGCGAACATACACGATGACATCACC | + |
|
Preference number: 3 (lower is better) Translates to: SVATEAPSPCGF*CSVANIHDDIT Trigger: GGTGATGTCATCGTGTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | ACACTGACTACCTGCATAGCAGGGATGCCACAGTGGTaGTCACGAGGTCCTGCTGCAGATCTGTTCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLTTCIAGMPQW*SRGPAADLFNV Trigger: GACATTGAACAGATCTGCAGCAGGACCTCGTGACCACCACTGTGGCATCCCTGCTATGCAGGTAGTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR CCA 72 bp | GAGACACTGACTACCTGCATAGCAGGGATGCCACAGTaGTGGTCACGAGGTCCTGCTGCAGATCTGTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ETLTTCIAGMPQ*WSRGPAADLFN Trigger: ATTGAACAGATCTGCAGCAGGACCTCGTGACCACCACTGTGGCATCCCTGCTATGCAGGTAGTCAGTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR CCA 72 bp | GGAGACTTAACCAGCCTTAGGCGCTGTATCAGCTGCTaGACACTCCGAACCTTGTTCTTGCTCCTGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GDLTSLRRCISC*TLRTLFLLLAL Trigger: CAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCTGGTTAAGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | TGTGACTTGCTCTGCAGACCAGGCTGCTCTGGGCCTTaGCCCTATGACCATATTCCTGACACTGCATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CDLLCRPGCSGP*PYDHIPDTAFR Trigger: TCTGAATGCAGTGTCAGGAATATGGTCATAGGGTCAAGGCCCAGAGCAGCCTGGTCTGCAGAGCAAGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | AGCAGGGATGCCACAGTGGTGGTCACGAGGTCCTGCTaGAGATCTGTTCAATGTCATTCATCTCTTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRDATVVVTRSC*RSVQCHSSLWD Trigger: GTCCCAAAGAGATGAATGACATTGAACAGATCTGCAGCAGGACCTCGTGACCACCACTGTGGCATCCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| 3UTR GCA 72 bp | GCTGTATCAGCTGCTGGACACTCCGAACCTTGTTCTTaGTCCTGGCTTTGGCTTCAGTTAGAGGCTGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: AVSAAGHSEPCS*SWLWLQLEAAC Trigger: ACATGCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAAGCTCGTCCCAGGGGAACACAGAGTCAAACAAGCTCTTTGGATTTCCATTCTTGCTCCTGGCTTaGGCTTCAGTTAGAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPSSSQGNTESNKLFGFPFLLLA*ASVRGC Trigger: GCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAA...TGGAAATCCAAAGAGCTTGTTTGACTCTGTGTTCCCCTGGGACGAGCTTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | TCCCAACATTTAGGGAGGCAGAAGGAGGCAGATCTCTaGGTTCAAGGTGAACCTGGCCAACAGATCGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQHLGRQKEADL*VQGEPGQQIEF Trigger: GAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCTGCCTCCCTAAATGTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | CCCTCGGAACTTCTCTGGGGCATCTCTGTCGTCCTCTaGGATATAAATGCCTGGTTCAACTGTGATCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSELLWGISVVL*DINAWFNCDHH Trigger: ATGGTGATCACAGTTGAACCAGGCATTTATATCCCAGAGGACGACAGAGATGCCCCAGAGAAGTTCCGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CCA 72 bp | CGAGCGCTGGGATTGAAGGTGTGTGCTGTCACCTCCTaGCTTGGTAAGTGGTGCTTTCATCTCTTATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RALGLKVCAVTS*LGKWCFHLLSS Trigger: AGAAGATAAGAGATGAAAGCACCACTTACCAAGCCAGGAGGTGACAGCACACACCTTCAATCCCAGCGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | CAGACCCATACAATACTGATAGTCAAAGCTCCTCAGTaGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTHTILIVKAPQ*LQKPPPHVDSA Trigger: AGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCACTGAGGAGCTTTGACTATCAGTATTGTATGGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGAGCAATAACTGTATATaGAGTTTGAGGCCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRQISEFKVNLANRSSSRSNNCI*SLRPAW Trigger: CCAGGCTGGCCTCAAACTCAATATACAGTTATTGCT...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | CAACTGAACCAGATGCTGTGTTTAGGGAAAGAAACATaGCTCTGCCACTGCCTTGCCATGTCATCCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLNQMLCLGKET*LCHCLAMSSPS Trigger: GCTAGGGGATGACATGGCAAGGCAGTGGCAGAGTCATGTTTCTTTCCCTAAACACAGCATCTGGTTCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | CCACAAGAGGGCATCAGATTCTATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAACTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PQEGIRFYYRWL*ATMWLLGTELR Trigger: CCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATAGAATCTGATGCCCTCTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | GCCTTATGGGATGGTAACTGCTTCCCAGAGAAGCTCTaGAGGACCAGAATGCTATCAGGCTCTTGGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: ALWDGNCFPEKL*RTRMLSGSWNP Trigger: TGGATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAAGCAGTTACCATCCCATAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | TTAGAGAGTACCACCACTGTGTGGTCTGTTCCACTGTaGCCTTGTGCTTCTTTGTGGACCAGAGCCATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LESTTTVWSVPL*PCASLWTRAIS Trigger: ACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACACAGTGGTGGTACTCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACCTGGCCAACAGATCGAGTTCCAGGATAGTCAGAGCTACACAGAGAAACAACTGTATATTGAGTTaGAGGCCAGCCTGGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: VNLANRSSSRIVRATQRNNCILS*RPAWAT Trigger: TGTAGCCCAGGCTGGCCTCAAACTCAATATACAGTT...GTTTCTCTGTGTAGCTCTGACTATCCTGGAACTCGATCTGTTGGCCAGGTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTCACTGTGTAGACCAGGCTGCCTCAAGCTCAGAAATCCGCCTGCCTCTGTGTATAATGAGTACATaGCAGCTGTCTTTAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GTHCVDQAASSSEIRLPLCIMST*QLSLDT Trigger: TGTGTCTAAAGACAGCTGCAATGTACTCATTATACA...CAGAGGCAGGCGGATTTCTGAGCTTGAGGCAGCCTGGTCTACACAGTGAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATCATGCTGTAGATGTTCTCCAAGCTCGTCCCAGGGGAACACAGAGTCAAGTAGTCAGAGTGAAGTaGTGCATGAGAAGGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QHHAVDVLQARPRGTQSQVVRVK*CMRRLH Trigger: ATGAAGCCTTCTCATGCACAACTTCACTCTGACTAC...TTGACTCTGTGTTCCCCTGGGACGAGCTTGGAGAACATCTACAGCATGATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | TTGGGACAATCTGCAGAAAGGATAAGAGGTGAGTCCTaGGTCACCACTACATCATCCTCAATCCGAACTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LGQSAERIRGES*VTTTSSSIRTP Trigger: CGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCTGCAGATTGTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | CACAATCCACGGTTCCAGATTTACATCCATTTAACATaGAGATGCCCTCGCTCACTGGCTGTGCAGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HNPRFQIYIHLT*RCPRSLAVQFP Trigger: TGGGAACTGCACAGCCAGTGAGCGAGGGCATCTTCATGTTAAATGGATGTAAATCTGGAACCGTGGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | CATCTATCGGAGCTTTACTGGCAAACATGGTCTCTATaGAAGCCTCTGACGTCAGCTTCCCAGCAATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLSELYWQTWSL*KPLTSASQQSA Trigger: TGCAGATTGCTGGGAAGCTGACGTCAGAGGCTTTCATAGAGACCATGTTTGCCAGTAAAGCTCCGATAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | GGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTaGTGTATTCTGGCTGAATGGAAACACAGCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: GKKDPRLLLADC*CILAEWKHSRT Trigger: GGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | TACCACCACTGTGTGGTCTGTTCCACTGTGCCCTTGTaGTTCTTTGTGGACCAGAGCCATAAGTTTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YHHCVVCSTVPL*FFVDQSHKFMS Trigger: AGACATAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACACAGTGGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | GTAACTGCTTCCCAGAGAAGCTCTGAAGGACCAGAATaGTATCAGGCTCTTGGAATCCACAGAGATACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTASQRSSEGPE*YQALGIHRDTG Trigger: TCCTGTATCTCTGTGGATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAAGCAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CCA 72 bp | ATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTaGCTGAATGGAAACACAGCAGGACCCCTGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IQDSCWLTVAVF*LNGNTAGPLCF Trigger: GAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | GTGTGGTCTGTTCCACTGTGCCCTTGTGCTTCTTTGTaGACCAGAGCCATAAGTTTATGTCTTCGAAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VWSVPLCPCASL*TRAISLCLRSA Trigger: TGCACTTCGAAGACATAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCGCCTGGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTACCAGTATGCATTGATTTaGACAATACATGGCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTAWLYRVLYDTISLGIYQYALI*TIHGCK Trigger: CTTGCAGCCATGTATTGTCAAAATCAATGCATACTG...GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCTGAGTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTACCATCCTTGATGAGTaGATTATTCTTCACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPESPLHHPQSELRALGTTILDE*IILHIV Trigger: CACTATGTGAAGAATAATCAACTCATCAAGGATGGT...AGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | CATCTCTTTGGGACAATCTGCAGAAAGGATAAGAGGTaGGTCCTGAGTCACCACTACATCATCCTCAATCCG | + |
|
Preference number: 3 (lower is better) Translates to: HLFGTICRKDKR*VLSHHYIILNP Trigger: CGGATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCTGCAGATTGTCCCAAAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | GCCATAAGTTTATGTCTTCGAAGTGCATATTCCACCTaGGATAGCCCTGGTGTCACCTCCCCTTACAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AISLCLRSAYST*DSPGVTSPYSF Trigger: AAAGCTGTAAGGGGAGGTGACACCAGGGCTATCTCAGGTGGAATATGCACTTCGAAGACATAAACTTATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | GATGCAGCCATCTCTCTCCAATCTAGGAAAGAGAATTaGGCTGAGGATGTAGTTCATTCAGAGGTGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DAAISLQSRKEN*AEDVVHSEVQS Trigger: GCTCTGCACCTCTGAATGAACTACATCCTCAGCTCAATTCTCTTTCCTAGATTGGAGAGAGATGGCTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | GAGTGGGGGAGACGAAGACAAGGAGAAGCAGCAGTATaGATTGATTTTGACAATACATGGCTGCAAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EWGRRRQGEAAV*IDFDNTWLQVA Trigger: AGCTACTTGCAGCCATGTATTGTCAAAATCAATGCATACTGCTGCTTCTCCTTGTCTTCGTCTCCCCCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | GATTCTATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAACTGAACTCAGGACCTCTAGTCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: DSITDGCEPPCG*WELNSGPLVSV Trigger: AACACTGACTAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | GTAAGTGCCATGGTTTTAGGTGTGAGCTACAATGCCTaGGTGCAGTCCCTTTGTTACAGGAGACATATACCA | + |
|
Preference number: 3 (lower is better) Translates to: VSAMVLGVSYNA*VQSLCYRRHIP Trigger: TGGTATATGTCTCCTGTAACAAAGGGACTGCACCCAGGCATTGTAGCTCACACCTAAAACCATGGCACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | CCTATGACCATATTCCTGACACTGCATTCAGAACGCTaGATTACAGGCACTAGTCACTATGCCCATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PMTIFLTLHSER*ITGTSHYAHSE Trigger: CTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGCGTTCTGAATGCAGTGTCAGGAATATGGTCATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR TCA 72 bp | CCTGGTGTCACCTCCCCTTACAGCTTTGAAAAACTCTaGTTTCTTGTGTGTTTCAGTGGTGAGCTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PGVTSPYSFEKL*FLVCFSGELHF Trigger: GAAATGCAGCTCACCACTGAAACACACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGGTGACACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | CCTGCACTGCAGAGACTGTTTGCTAATCTTCTAGCTTaGACTTCCCTAACAGAAATATGGAAAGTAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PALQRLFANLLA*TSLTEIWKVGA Trigger: TGCCCCTACTTTCCATATTTCTGTTAGGGAAGTGCAAGCTAGAAGATTAGCAAACAGTCTCTGCAGTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | TCTTGTAAGTGCCATGGTTTTAGGTGTGAGCTACAATaGCTGGGTGCAGTCCCTTTGTTACAGGAGACATAT | + |
|
Preference number: 3 (lower is better) Translates to: SCKCHGFRCELQ*LGAVPLLQETY Trigger: ATATGTCTCCTGTAACAAAGGGACTGCACCCAGGCATTGTAGCTCACACCTAAAACCATGGCACTTACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | GCTAATCTTCTAGCTTGCACTTCCCTAACAGAAATATaGAAAGTAGGGGCAGATCCCACAAAACCCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ANLLACTSLTEI*KVGADPTKPLD Trigger: ATCCAAGGGTTTTGTGGGATCTGCCCCTACTTTCCATATTTCTGTTAGGGAAGTGCAAGCTAGAAGATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATACAGGAAGTTGTTGTCTTGATGGAATGTGTAGGGGATGTCGTTGCTCACCTCCCCTTACAGCTTaGAAAAACTCTGATTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RDTGSCCLDGMCRGCRCSPPLTA*KNSDFL Trigger: CAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGG...TGAGCAACGACATCCCCTACACATTCCATCAAGACAACAACTTCCTGTATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTCAAATTCAAACTTCGCGTAAAGAAAGGCTTCATCTATCGGAGCTTTACAATGCTATCAGGCTCTaGGAATCCACAGAGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GTQIQTSRKERLHLSELYNAIRL*ESTEIQ Trigger: CTGTATCTCTGTGGATTCCAAGAGCCTGATAGCATT...GTAAAGCTCCGATAGATGAAGCCTTTCTTTACGCGAAGTTTGAATTTGAGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR GCA 72 bp | AAAACACTAACTCTAGAAACACGATGTGTAGTAAGTTaGCCTGTGAGTAAGTTACTCACCCGCTCAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KTLTLETRCVVS*PVSKLLTRSVS Trigger: ACTCACTGAGCGGGTGAGTAACTTACTCACAGGGCAACTTACTACACATCGTGTTTCTAGAGTTAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | TGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTaGCTGACTGTTGCTGTATTCTGGCTGAATGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CNQMARKIQDSC*LTVAVFWLNGN Trigger: GTTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACACAGAGTCAAACAAGCTCTTTGGATTTCCAGAACAGCTTCATAGAGCTAAAAACTCTGATTTCTaGTGTGTTTCAGTGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GNTESNKLFGFPEQLHRAKNSDF*CVSVVS Trigger: GCTCACCACTGAAACACACAAGAAATCAGAGTTTTT...AGCTCTATGAAGCTGTTCTGGAAATCCAAAGAGCTTGTTTGACTCTGTGTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR TCA 72 bp | GCAGTCCCTTTGTTACAGGAGACATATACCAGATTCTaGACTAATCACATAAAACCATGTGACACTGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: AVPLLQETYTRF*TNHIKPCDTGY Trigger: GTACCCAGTGTCACATGGTTTTATGTGATTAGTTCAGAATCTGGTATATGTCTCCTGTAACAAAGGGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| 3UTR GCA 72 bp | CTTTCCAAGAAGAACCTAGACACTTTCCATGTTCTGTaGAATCAAATGGCAAGAAAGATCCAAGACTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSKKNLDTFHVL*NQMARKIQDSC Trigger: ACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGAACATGGAAAGTGTCTAGGTTCTTCTTGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CCA 72 bp | GGAGAAGCAGCAGTATGCATTGATTTTGACAATACATaGCTGCAAGTAGCTACATGGATCAATTCATTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GEAAVCIDFDNT*LQVATWINSLR Trigger: TCTTAATGAATTGATCCATGTAGCTACTTGCAGCCATGTATTGTCAAAATCAATGCATACTGCTGCTTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGTGACTTGCTCTGCAGACCAGGCTGCTCTGGGCCTTGACCCTATGACCGCTGTAAACATGACATaGATCCTGAGAGGCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAVTCSADQAALGLDPMTAVNMT*ILRGRG Trigger: TCCGCGGCCTCTCAGGATGCATGTCATGTTTACAGC...GGTCATAGGGTCAAGGCCCAGAGCAGCCTGGTCTGCAGAGCAAGTCACAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCACTGGCTGTGCAGTTCCCAGGGAAGCTGTGTCTAATCCCCAGAGACACTTTTACCGGCGCAGGCTaGAGGGAGTACCTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVQFPGKLCLIPRDTFTGAG*REYLRC Trigger: ACAGCGAAGGTACTCCCTCCAGCCTGCGCCGGTAAA...AGTGTCTCTGGGGATTAGACACAGCTTCCCTGGGAACTGCACAGCCAGTGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTTAGGCGCTGTATCAGCTGCTGGACACTCCGAACCTTGTTCTTGCTCCTTTACCGGCGCAGGCTaGAGGGAGTACCTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PALGAVSAAGHSEPCSCSFTGAG*REYLRC Trigger: ACAGCGAAGGTACTCCCTCCAGCCTGCGCCGGTAAA...GGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCATGGTGTCACCTCCCCTaGTCTGAGGAGGTGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVQNLDQEAEAMASKYWPWCHLP*SEEVWM Trigger: CATCCACACCTCCTCAGACCAGGGGAGGTGACACCA...TGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | CCAGCGGGTAGGCTTCATCCACTCCGGTTAAGGCTATaGCTCCATCTGTGCCAGATCGAGGGCCATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PAGRLHPLRLRL*LHLCQIEGHPT Trigger: TGTGGGATGGCCCTCGATCTGGCACAGATGGAGCAATAGCCTTAACCGGAGTGGATGAAGCCTACCCGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| CDS-3UTR GCA 90 bp | CGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCAAGGCGCTGTATCAGCTaGTGGACACTCCGAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVQNLDQEAEAMASKYWPRRCIS*WTLRTL Trigger: CAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCT...TGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | CGCTCACTGGCTGTGCAGTTCCCAGGGAAGCTGTGTCTAATCCCCAGAGACACTGCTGTAAACATGACATaGATCCTGAGAGGCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLAVQFPGKLCLIPRDTAVNMT*ILRGRG Trigger: TCCGCGGCCTCTCAGGATGCATGTCATGTTTACAGC...AGTGTCTCTGGGGATTAGACACAGCTTCCCTGGGAACTGCACAGCCAGTGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | AAACTCAGAGGTGTGCCCTATGAGCGAGCGCTGGGATaGAAGGTGTGTGCTGTCACCTCCTGGCTTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRGVPYERALG*KVCAVTSWLGK Trigger: CTTACCAAGCCAGGAGGTGACAGCACACACCTTCAATCCCAGCGCTCGCTCATAGGGCACACCTCTGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCTGGTGTCACCTCCCCTaGTCTGAGGAGGTGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSWCHLP*SEEVWM Trigger: CATCCACACCTCCTCAGACCAGGGGAGGTGACACCA...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | CTTAGGCGCTGTATCAGCTGCTGGACACTCCGAACCTaGTTCTTGCTCCTGGCTTTGGCTTCAGTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRRCISCWTLRT*FLLLALASVRG Trigger: GCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGTCACCACTACATCATCCTCAATCCGAACTCCGAGCCCTCGGAACTGCTGTAAACATGACATaGATCCTGAGAGGCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPESPLHHPQSELRALGTAVNMT*ILRGRG Trigger: TCCGCGGCCTCTCAGGATGCATGTCATGTTTACAGC...AGTTCCGAGGGCTCGGAGTTCGGATTGAGGATGATGTAGTGGTGACTCAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000165258.8 |
||
| CDS-3UTR GCA 90 bp | AACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCACCTCAAACGTGGTCTGTTCCACTGTaGCCTTGTGCTTCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLDQEAEAMASKYWPPQTWSVPL*PCASLW Trigger: CCACAAAGAAGCACAAGGGCACAGTGGAACAGACCA...CGTTTGAGGTGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCCTATTGCTCCATCTGTaGCAGATCGAGGGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSLLLHL*QIEGHP Trigger: GGGATGGCCCTCGATCTGGCACAGATGGAGCAATAG...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGTACCACCACTGTGTaGTCTGTTCCACTGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSSTTTV*SVPLCP Trigger: AGGGCACAGTGGAACAGACCACACAGTGGTGGTACT...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | CATCCATTTAACATGAAGATGCCCTCGCTCACTGGCTGTGCAGTTCCCAGGGAAAGTACCACCACTGTGTaGTCTGTTCCACTGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPFNMKMPSLTGCAVPRESTTTV*SVPLCP Trigger: AGGGCACAGTGGAACAGACCACACAGTGGTGGTACT...TTCCCTGGGAACTGCACAGCCAGTGAGCGAGGGCATCTTCATGTTAAATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCAAAAAGCATGGCCTTATaGGATGGTAACTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVQNLDQEAEAMASKYWPKSMAL*DGNCFP Trigger: TGGGAAGCAGTTACCATCCCATAAGGCCATGCTTTT...TGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | CTGACTGTTGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCAGTGCATATTCCACCTaGGATAGCCCTGGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LTVAVFWLNGNTAGPLCFSAYST*DSPGVT Trigger: GGTGACACCAGGGCTATCTCAGGTGGAATATGCACT...GAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCCTCTATGAAAGCCTCTaGCGTCAGCTTCCCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSLYESL*RQLPSN Trigger: ATTGCTGGGAAGCTGACGTCAGAGGCTTTCATAGAG...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCACTCACATAGCAGGATaGTTCACAGCCTCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCILAEWKHSRTPVFPEATHIAG*FTASIK Trigger: CTTGATGGAGGCTGTGAATCATCCTGCTATGTGAGT...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | GGGCAGTATTTTCGAGCAGCCTTGAAGGCGCTTTCCTaGCTGGTCTTTGTGATGCCCAGATCCTTAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQYFRAALKALS*LVFVMPRSLSF Trigger: GAAGCTTAAGGATCTGGGCATCACAAAGACCAGCAAGGAAAGCGCCTTCAAGGCTGCTCGAAAATACTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| 3UTR CAA 72 bp | CCACTGTTACAGCCCTCAGGAGAGACTGATAAGGCCTaGAGGATGAGTAGTCAGAGGGCCATTTGTGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLLQPSGETDKA*RMSSQRAICVL Trigger: TAGGACACAAATGGCCCTCTGACTACTCATCCTCAAGGCCTTATCAGTCTCTCCTGAGGGCTGTAACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCACTCACATAGCAGGATaGTTCACAGCCTCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSTHIAG*FTASIK Trigger: CTTGATGGAGGCTGTGAATCATCCTGCTATGTGAGT...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCTCTGAAGGACCAGAATaGTATCAGGCTCTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CCILAEWKHSRTPVFPEASEGPE*YQALGI Trigger: GATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGA...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCAAAAGCATGGCCTTATaGGATGGTAACTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCILAEWKHSRTPVFPEAKSMAL*DGNCFP Trigger: TGGGAAGCAGTTACCATCCCATAAGGCCATGCTTTT...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | GAGTACCACCACTGTGTGGTCTGTTCCACTGTGCCCTaGTGCTTCTTTGTGGACCAGAGCCATAAGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: EYHHCVVCSTVP*CFFVDQSHKFM Trigger: CATAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACAGACCACACAGTGGTGGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAATTACAGGCACTAGTCACTATGCCCATTCTGAGTTTGTCATGCTTTTGTATCACCATTCCAGGCTaGAGAGGGAGTGACCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AELQALVTMPILSLSCFCITIPG*RGSDRG Trigger: GCCTCGGTCACTCCCTCTGCAGCCTGGAATGGTGAT...ACAAAAGCATGACAAACTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAATTACAGGCACTAGTCACTATGCCCATTCTGAGTTTGTCATGCTTTTGTTTTACCGGCGCAGGCTaGAGGGAGTACCTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AELQALVTMPILSLSCFCFTGAG*REYLRC Trigger: ACAGCGAAGGTACTCCCTCCAGCCTGCGCCGGTAAA...ACAAAAGCATGACAAACTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCCCTTGTGCTTCTTTGTaGACCAGAGCCATAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CCILAEWKHSRTPVFPEAPCASL*TRAISL Trigger: TAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGG...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | GTGAACCTGGCCAACAGATCGAGTTCCAGGATAGTCAGAGCTACACAGAGAAACTCTGAAGGACCAGAATaGTATCAGGCTCTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VNLANRSSSRIVRATQRNSEGPE*YQALGI Trigger: GATTCCAAGAGCCTGATAGCATTCTGGTCCTTCAGA...GTTTCTCTGTGTAGCTCTGACTATCCTGGAACTCGATCTGTTGGCCAGGTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCCTGAGGCCTGGGATATAAATGCCTaGTTCAACTGTGATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCILAEWKHSRTPVFPEAWDINA*FNCDHH Trigger: ATGGTGATCACAGTTGAACCAGGCATTTATATCCCA...GGCCTCAGGAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTAGTGCATATTCCACCTaGGATAGCCCTGGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSVQSNGKKDPRLLLADCSAYST*DSPGVT Trigger: GGTGACACCAGGGCTATCTCAGGTGGAATATGCACT...ACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | GGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTGGCTGAAAGAAAGGATAAGAGGTaGGTCCTGAGTCACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKKDPRLLLADCCCILAERKDKR*VLSHHY Trigger: GTAGTGGTGACTCAGGACTCACCTCTTATCCTTTCT...TTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGCTTCCCAGCAATCTaGATTCTCTTAATCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRQISEFKVNLANRSSSSFPAI*ILLISE Trigger: TTCAGAGATTAAGAGAATGCAGATTGCTGGGAAGCT...GGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGATCTGTTCAATGTCATTCATCTCTTTGGGACAATCTGCAGAAAGGATCGCTGTATCAGCTGCTaGACACTCCGAACCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AADLFNVIHLFGTICRKDRCISC*TLRTLF Trigger: GAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCG...ATCCTTTCTGCAGATTGTCCCAAAGAGATGAATGACATTGAACAGATCTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041609.11 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTCGCTGTATCAGCTGCTaGACACTCCGAACCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVQSNGKKDPRLLLADCRCISC*TLRTLF Trigger: GAACAAGGTTCGGAGTGTCCAGCAGCTGATACAGCG...ACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTGGCTGAACATAGTGCAAAGTGTTaGAGCGATTACCGCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKKDPRLLLADCCCILAEHSAKC*SDYRLQ Trigger: TTGCAGGCGGTAATCGCTCCAACACTTTGCACTATG...TTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTTCCCAGAGAAGCTCTaGAGGACCAGAATGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVQSNGKKDPRLLLADCCFPEKL*RTRMLS Trigger: TGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAA...GCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAATTACAGGCACTAGTCACTATGCCCATTCTGAGTTTGTCATGCTTTTGTTGGTCTGTTCCACTGTaGCCTTGTGCTTCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELQALVTMPILSLSCFCWSVPL*PCASLW Trigger: CCACAAAGAAGCACAAGGGCACAGTGGAACAGACCA...ACAAAAGCATGACAAACTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAGGGACACATAACCAAGCCCTTACTTTACATTCACATGTTAAACTTTCTGAGGCGCTGTATCAGCTaGTGGACACTCCGAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MQGHITKPLLYIHMLNFLRRCIS*WTLRTL Trigger: CAAGGTTCGGAGTGTCCAGCAGCTGATACAGCGCCT...CAGAAAGTTTAACATGTGAATGTAAAGTAAGGGCTTGGTTATGTGTCCCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCCATAGTGCAAAGTGTTaGAGCGATTACCGCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVQSNGKKDPRLLLADCCHSAKC*SDYRLQ Trigger: TTGCAGGCGGTAATCGCTCCAACACTTTGCACTATG...GCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGCAGAAAGGGATGAAGAGAGTTTTCTGTTGAAATGTGTTAACTGGAATCTATTGCTCCATCTGTaGCAGATCGAGGGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAERDEESFLLKCVNWNLLLHL*QIEGHP Trigger: GGGATGGCCCTCGATCTGGCACAGATGGAGCAATAG...ATTCCAGTTAACACATTTCAACAGAAAACTCTCTTCATCCCTTTCTGCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| 3UTR CAA 72 bp | TCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTaGTTGGCTGACTGTTGCTGTATTCTGGCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSNGKKDPRL*LADCCCILAEW Trigger: CCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGCAGAAAGGGATGAAGAGAGTTTTCTGTTGAAATGTGTTAACTGGAATAGCTTCATAGAGCTCTaGCTGAGGGGCGGTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSAERDEESFLLKCVNWNSFIEL*LRGGES Trigger: AGATTCACCGCCCCTCAGGCAGAGCTCTATGAAGCT...ATTCCAGTTAACACATTTCAACAGAAAACTCTCTTCATCCCTTTCTGCACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTGGCTGGTCAAACAAGCTCTTTaGATTTCCAGAACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MARKIQDSCWLTVAVFWLVKQAL*ISRTAS Trigger: TGAAGCTGTTCTGGAAATCCAAAGAGCTTGTTTGAC...CAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| 3UTR CAA 72 bp | GTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTaGGCTGACTGTTGCTGTATTCTGGCTGAATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VQSNGKKDPRLL*ADCCCILAEWK Trigger: TTTCCATTCAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR TCA 90 bp | ATGCAGGGACACATAACCAAGCCCTTACTTTACATTCACATGTTAAACTTTCTGTTCCCAGAGAAGCTCTaGAGGACCAGAATGCTATCA | + |
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Preference number: 4 (lower is better) Translates to: MQGHITKPLLYIHMLNFLFPEKL*RTRMLS Trigger: TGATAGCATTCTGGTCCTTCAGAGCTTCTCTGGGAA...CAGAAAGTTTAACATGTGAATGTAAAGTAAGGGCTTGGTTATGTGTCCCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR TCA 90 bp | ATGCAGGGACACATAACCAAGCCCTTACTTTACATTCACATGTTAAACTTTCTGATAAGAGGTGAGTCCTaGGTCACCACTACATCATCC | + |
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Preference number: 4 (lower is better) Translates to: MQGHITKPLLYIHMLNFLIRGES*VTTTSS Trigger: GGATGATGTAGTGGTGACTCAGGACTCACCTCTTAT...CAGAAAGTTTAACATGTGAATGTAAAGTAAGGGCTTGGTTATGTGTCCCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR GCA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACAGCTTCCCAGCAATCTaGATTCTCTTAATCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: STLQLSLDTPQEGIRFYYSFPAI*ILLISE Trigger: TTCAGAGATTAAGAGAATGCAGATTGCTGGGAAGCT...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR GCA 90 bp | AGAAGTGCAGAAAGGGATGAAGAGAGTTTTCTGTTGAAATGTGTTAACTGGAATTCAGCGTCAGCATCATaGTGTAGATGTTCTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RSAERDEESFLLKCVNWNSASAS*CRCSPS Trigger: GCTTGGAGAACATCTACAGCATGATGCTGACGCTGA...ATTCCAGTTAACACATTTCAACAGAAAACTCTCTTCATCCCTTTCTGCACTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CCA 90 bp | TGTTCTGTGCAATCAAATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGTCATTCATCTCTTTaGGACAATCTGCAGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: CSVQSNGKKDPRLLLADCCHSSL*DNLQKG Trigger: TCCTTTCTGCAGATTGTCCCAAAGAGATGAATGACA...ACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCATTTGATTGCACAGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CCA 90 bp | TTACCATGGGACTACACATACTCAGATTTAAAAGAAGTTTACACACTAGCTCTTCCTTGTGCTTCTTTGTaGACCAGAGCCATAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LPWDYTYSDLKEVYTLALPCASL*TRAISL Trigger: TAAACTTATGGCTCTGGTCCACAAAGAAGCACAAGG...AAGAGCTAGTGTGTAAACTTCTTTTAAATCTGAGTATGTGTAGTCCCATGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS CCA 90 bp | ACCTCCCCTGGTCTGAGGAGGTGTGGATGTGTAACCGGGCTGGGCTaGCCTAAGTACCGGTTTGGAATCTTCTTTACCGGCGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TSPGLRRCGCVTGLG*PKYRFGIFFTGAGW Trigger: CCAGCCTGCGCCGGTAAAGAAGATTCCAAACCGGTACTTAGGCCAGCCCAGCCCGGTTACACATCCACACCTCCTCAGACCAGGGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS CCA 90 bp | TTCCAGCCTGGTCTGAGGAGGTGTGGATGTGTAACCGGGCTGGGCTaGCCTAAGTACCGGTTTGGAATCTTCTTTACCGGCGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FQPGLRRCGCVTGLG*PKYRFGIFFTGAGW Trigger: CCAGCCTGCGCCGGTAAAGAAGATTCCAAACCGGTACTTAGGCCAGCCCAGCCCGGTTACACATCCACACCTCCTCAGACCAGGCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165258.8 |
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| CDS-3UTR CAA 90 bp | TGGCTACAGAAGCCCCCTCCCCATGTGGATTCTGCTGCAGTGTTGCGAACATACGCGGTGAATCTGCCATaGACAGGCCATGTCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: WLQKPPPHVDSAAVLRTYAVNLP*TGHVLV Trigger: CACCAGGACATGGCCTGTCAATGGCAGATTCACCGC...GTATGTTCGCAACACTGCAGCAGAATCCACATGGGGAGGGGGCTTCTGTAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | CGTGTGCAGAACCTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCACTCCGAACCTTGTTCTaGCTCCTGGCTTTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RVQNLDQEAEAMASKYWPLRTLF*LLALAS Trigger: TGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAG...TGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAGGTTCTGCACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS CCA 90 bp | GGCTGGCCTAAGTACCGGTTTGGAATCTTCTTTACCGGCGCAGGCTaGAGGGAGTACCTTCGCTGTAAACATGACATGCATCCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GWPKYRFGIFFTGAG*REYLRCKHDMHPER Trigger: CCTCTCAGGATGCATGTCATGTTTACAGCGAAGGTACTCCCTCCAGCCTGCGCCGGTAAAGAAGATTCCAAACCGGTACTTAGGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 ENSMUST00000165258.8 |
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| CDS-3UTR CAA 90 bp | GTGGCTGTGACTTGCTCTGCAGACCAGGCTGCTCTGGGCCTTGACCCTATGACCGTAGTCAGAGTGAAGTaGTGCATGAGAAGGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VAVTCSADQAALGLDPMTVVRVK*CMRRLH Trigger: ATGAAGCCTTCTCATGCACAACTTCACTCTGACTAC...GGTCATAGGGTCAAGGCCCAGAGCAGCCTGGTCTGCAGAGCAAGTCACAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | CTGGACCAGGAGGCAGAGGCCATGGCAAGTAAGTATTGGCCACCTCAAACGCCGAATGCTATCAGGCTCTaGGAATCCACAGAGATACAG | + |
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Preference number: 5 (lower is better) Translates to: LDQEAEAMASKYWPPQTPNAIRL*ESTEIQ Trigger: CTGTATCTCTGTGGATTCCAAGAGCCTGATAGCATT...CGGCGTTTGAGGTGGCCAATACTTACTTGCCATGGCCTCTGCCTCCTGGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | GTGGCTGTGACTTGCTCTGCAGACCAGGCTGCTCTGGGCCTTGACCCTATGACCTCTCAGCTCTCAGTTTaGGTAGCAGGTGTTGAAATT | + |
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Preference number: 5 (lower is better) Translates to: VAVTCSADQAALGLDPMTSQLSV*VAGVEI Trigger: AATTTCAACACCTGCTACCAAAACTGAGAGCTGAGA...GGTCATAGGGTCAAGGCCCAGAGCAGCCTGGTCTGCAGAGCAAGTCACAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGCCTGGCTGTACAGGGTTCTTTATGACACCATTAGCCTGGGTATCTACTGTTCCACTGTGCCCTaGTGCTTCTTTGTGGACCAG | + |
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Preference number: 5 (lower is better) Translates to: TTAWLYRVLYDTISLGIYCSTVP*CFFVDQ Trigger: CTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACA...GTAGATACCCAGGCTAATGGTGTCATAAAGAACCCTGTACAGCCAGGCGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | GTGAACCTGGCCAACAGATCGAGTTCCAGGATAGTCAGAGCTACACAGAGAAACTTCTTGCTCCTGGCTTaGGCTTCAGTTAGAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VNLANRSSSRIVRATQRNFLLLA*ASVRGC Trigger: GCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAA...GTTTCTCTGTGTAGCTCTGACTATCCTGGAACTCGATCTGTTGGCCAGGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | AGGAGGCAGATCTCTGAGTTCAAGGTGAACCTGGCCAACAGATCGAGTTCCAGGAATGCTATCAGGCTCTaGGAATCCACAGAGATACAG | + |
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Preference number: 5 (lower is better) Translates to: RRQISEFKVNLANRSSSRNAIRL*ESTEIQ Trigger: CTGTATCTCTGTGGATTCCAAGAGCCTGATAGCATT...CCTGGAACTCGATCTGTTGGCCAGGTTCACCTTGAACTCAGAGATCTGCCTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | AGTTGCCCTGTGAGTAAGTTACTCACCCGCTCAGTGAGTCTTACTGTATGTGCTTTCTTGCTCCTGGCTTaGGCTTCAGTTAGAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SCPVSKLLTRSVSLTVCAFLLLA*ASVRGC Trigger: GCAGCCTCTAACTGAAGCCAAAGCCAGGAGCAAGAA...AGCACATACAGTAAGACTCACTGAGCGGGTGAGTAACTTACTCACAGGGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | ATGGCAAGAAAGATCCAAGACTCTTGTTGGCTGACTGTTGCTGTATTCTGGCTGTTGAAGGCGCTTTCCTaGCTGGTCTTTGTGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: MARKIQDSCWLTVAVFWLLKALS*LVFVMP Trigger: GGGCATCACAAAGACCAGCAAGGAAAGCGCCTTCAA...CAGCCAGAATACAGCAACAGTCAGCCAACAAGAGTCTTGGATCTTTCTTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | CTGACTGTTGCTGTATTCTGGCTGAATGGAAACACAGCAGGACCCCTGTGTTTCGTAGTCAGAGTGAAGTaGTGCATGAGAAGGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LTVAVFWLNGNTAGPLCFVVRVK*CMRRLH Trigger: ATGAAGCCTTCTCATGCACAACTTCACTCTGACTAC...GAAACACAGGGGTCCTGCTGTGTTTCCATTCAGCCAGAATACAGCAACAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | GCTGAATTACAGGCACTAGTCACTATGCCCATTCTGAGTTTGTCATGCTTTTGTCTCCGAACCTTGTTCTaGCTCCTGGCTTTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AELQALVTMPILSLSCFCLRTLF*LLALAS Trigger: TGAAGCCAAAGCCAGGAGCAAGAACAAGGTTCGGAG...ACAAAAGCATGACAAACTCAGAATGGGCATAGTGACTAGTGCCTGTAATTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | ATGCAGGGACACATAACCAAGCCCTTACTTTACATTCACATGTTAAACTTTCTGTGTTCCACTGTGCCCTaGTGCTTCTTTGTGGACCAG | + |
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Preference number: 5 (lower is better) Translates to: MQGHITKPLLYIHMLNFLCSTVP*CFFVDQ Trigger: CTGGTCCACAAAGAAGCACAAGGGCACAGTGGAACA...CAGAAAGTTTAACATGTGAATGTAAAGTAAGGGCTTGGTTATGTGTCCCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | CAACTCCATCAAAGCCACCCTAACCACCAGTTACATCTGCAGAACTTGACTGTAACCATCCTTGATGAGTaGATTATTCTTCACATAGTG | + |
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Preference number: 5 (lower is better) Translates to: QLHQSHPNHQLHLQNLTVTILDE*IILHIV Trigger: CACTATGTGAAGAATAATCAACTCATCAAGGATGGT...TACAGTCAAGTTCTGCAGATGTAACTGGTGGTTAGGGTGGCTTTGATGGAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACAGTCAAACAAGCTCTTaGGATTTCCAGAACAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: STLQLSLDTPQEGIRFYYSQTSS*DFQNSF Trigger: GAAGCTGTTCTGGAAATCCAAAGAGCTTGTTTGACT...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163754.9 |
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| CDS-3UTR CAA 90 bp | AGTACATTGCAGCTGTCTTTAGACACACCACAAGAGGGCATCAGATTCTATTACACCATCCTTGATGAGTaGATTATTCTTCACATAGTG | + |
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Preference number: 5 (lower is better) Translates to: STLQLSLDTPQEGIRFYYTILDE*IILHIV Trigger: CACTATGTGAAGAATAATCAACTCATCAAGGATGGT...GTAATAGAATCTGATGCCCTCTTGTGGTGTGTCTAAAGACAGCTGCAATGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 |
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| CDS GCA 72 bp | CAGGCTGGAGGGAGTACCTTCGCTGTAAACATGACATaGATCCTGAGAGGCCGCGGAGCCTTGCTAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: QAGGSTFAVNMT*ILRGRGALLER Trigger: CCGTTCTAGCAAGGCTCCGCGGCCTCTCAGGATGCATGTCATGTTTACAGCGAAGGTACTCCCTCCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 ENSMUST00000165258.8 |
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| CDS CAA 72 bp | GTAAACATGACATGCATCCTGAGAGGCCGCGGAGCCTaGCTAGAACGGGAGCCAGCTTGGGGGTTGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VNMTCILRGRGA*LEREPAWGLRA Trigger: TGCTCTCAACCCCCAAGCTGGCTCCCGTTCTAGCAAGGCTCCGCGGCCTCTCAGGATGCATGTCATGTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 ENSMUST00000165258.8 |
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| CDS CCA 72 bp | GGTCTGAGGAGGTGTGGATGTGTAACCGGGCTGGGCTaGCCTAAGTACCGGTTTGGAATCTTCTTTACCGGC | + |
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Preference number: 6 (lower is better) Translates to: GLRRCGCVTGLG*PKYRFGIFFTG Trigger: GCCGGTAAAGAAGATTCCAAACCGGTACTTAGGCCAGCCCAGCCCGGTTACACATCCACACCTCCTCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 ENSMUST00000165258.8 |
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| CDS CCA 72 bp | AAGTACCGGTTTGGAATCTTCTTTACCGGCGCAGGCTaGAGGGAGTACCTTCGCTGTAAACATGACATGCAT | + |
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Preference number: 6 (lower is better) Translates to: KYRFGIFFTGAG*REYLRCKHDMH Trigger: ATGCATGTCATGTTTACAGCGAAGGTACTCCCTCCAGCCTGCGCCGGTAAAGAAGATTCCAAACCGGTACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041609.11 ENSMUST00000163754.9 ENSMUST00000165258.8 |
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