RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030094

Ensembl transcript IDs: ENSMUST00000032182.5, ENSMUST00000150279.3, ENSMUST00000206476.2

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCGAAGCCAGTGATGGCCTGCACGCAGTCGATGCCCAGCTTGCGTaGCACCCGGTTCAGGTTAGGCAGGGTCATCTGGACACAGCCGAC +
Preference number: 1 (lower is better)
Translates to: IEASDGLHAVDAQLA*HPVQVRQGHLDTAD
Trigger: GTCGGCTGTGTCCAGATGACCCTGCCTAACCTGAACCGGGTGGCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp ATGCCCAGCTTGCGTGCCACCCGGTTCAGGTTAGGCAGGGTCATCTaGACACAGCCGACGGGCATCATGCTGGGCAGGAAGAGGTACACG +
Preference number: 1 (lower is better)
Translates to: MPSLRATRFRLGRVI*TQPTGIMLGRKRYT
Trigger: CGTGTACCTCTTCCTGCCCAGCATGATGCCCGTCGGCTGTGTCCAGATGACCCTGCCTAACCTGAACCGGGTGGCACGCAAGCTGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp CTGGAGCAGGCTCTGCTCCTTACCCTTCCTGCACCACAGTGCAGATaGCCTCACCTTTGGACTCCCTGTGCCCATGTGACCCTCACCCAT +
Preference number: 1 (lower is better)
Translates to: LEQALLLTLPAPQCR*PHLWTPCAHVTLTH
Trigger: ATGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 90 bp GCCCCAGCAGCTCATCCCCTCTATCTCACAGGTAGCACTGCTCTGTaGGGACAGAGGCTCCACCCTGCACTGGAGCCATGTCAAAGGACT +
Preference number: 1 (lower is better)
Translates to: APAAHPLYLTGSTAL*GQRLHPALEPCQRT
Trigger: AGTCCTTTGACATGGCTCCAGTGCAGGGTGGAGCCTCTGTCCTCACAGAGCAGTGCTACCTGTGAGATAGAGGGGATGAGCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp TCACAACTGGAGCAGGCTCTGCTCCTTACCCTTCCTGCACCACAGTaGAGATGGCCTCACCTTTGGACTCCCTGTGCCCATGTGACCCTC +
Preference number: 1 (lower is better)
Translates to: SQLEQALLLTLPAPQ*RWPHLWTPCAHVTL
Trigger: GAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp TCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACAGCTCCCATCTaGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: SGWVGVRLICCTAPI*PVVLSPSACCLPSL
Trigger: CAGAGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 90 bp CAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGGGTTaGTGTCAGACTGATCTGCTGCACAGCTCCCATCTGGCCTGTAGT +
Preference number: 1 (lower is better)
Translates to: QTAAHQHQPMGIRLG*CQTDLLHSSHLACS
Trigger: ACTACAGGCCAGATGGGAGCTGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 90 bp TCACAGGTAGCACTGCTCTGTGAGGACAGAGGCTCCACCCTGCACTaGAGCCATGTCAAAGGACTTCCGACAGGAGCAGGCAAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: SQVALLCEDRGSTLH*SHVKGLPTGAGKAA
Trigger: TGCTGCCTTGCCTGCTCCTGTCGGAAGTCCTTTGACATGGCTCCAGTGCAGGGTGGAGCCTCTGTCCTCACAGAGCAGTGCTACCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 90 bp TGGACATGGAGGGACTGGTACCATTGTGCGCTGCTGAAGGGAAGGTaGATGGTGTGGCCACTGAGGACAGTTCAGCCACACCCTCCCCAA +
Preference number: 1 (lower is better)
Translates to: WTWRDWYHCALLKGR*MVWPLRTVQPHPPQ
Trigger: TTGGGGAGGGTGTGGCTGAACTGTCCTCAGTGGCCACACCATTCACCTTCCCTTCAGCAGCGCACAATGGTACCAGTCCCTCCATGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 90 bp CATCAGTTACTGGATGGCAATAGCCTCCATGGAAATCGAAGCCAGTaGTGGCCTGCACGCAGTCGATGCCCAGCTTGCGTGCCACCCGGT +
Preference number: 1 (lower is better)
Translates to: HQLLDGNSLHGNRSQ*WPARSRCPACVPPG
Trigger: ACCGGGTGGCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCATGGAGGCTATTGCCATCCAGTAACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp ACAAGGCAACATCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATaGACTACCCGAGTAAACAAACCGCGGCCTCTCAGGCAGGCAACA +
Preference number: 1 (lower is better)
Translates to: TRQHRSQQPKVGAGA*TTRVNKPRPLRQAT
Trigger: TGTTGCCTGCCTGAGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGATGTTGCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp AGGCTTCACATCACAACTGGAGCAGGCTCTGCTCCTTACCCTTCCTaGACCACAGTGCAGATGGCCTCACCTTTGGACTCCCTGTGCCCA +
Preference number: 1 (lower is better)
Translates to: RLHITTGAGSAPYPS*TTVQMASPLDSLCP
Trigger: TGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGATGTGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp CTGTTTCTCAAACCTGCAGCCCAGTACAGCTTCCACAGCACAGCCTaGGGCCTCAACAGAATCCCAGTAGGCCACACCAGTCCCCTTACG +
Preference number: 1 (lower is better)
Translates to: LFLKPAAQYSFHSTA*GLNRIPVGHTSPLT
Trigger: CGTAAGGGGACTGGTGTGGCCTACTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAGGTTTGAGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp CTGCTCCTTACCCTTCCTGCACCACAGTGCAGATGGCCTCACCTTTaGACTCCCTGTGCCCATGTGACCCTCACCCATTTATACACCAGC +
Preference number: 1 (lower is better)
Translates to: LLLTLPAPQCRWPHL*TPCAHVTLTHLYTS
Trigger: GCTGGTGTATAAATGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp AGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTTCTCAAACCTaGAGCCCAGTACAGCTTCCACAGCACAGCCTGGGGCCTCAACAG +
Preference number: 1 (lower is better)
Translates to: SLCSIHLRSMAVSQT*SPVQLPQHSLGPQQ
Trigger: CTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp TCAGGAAAGCTCAACACTCTCTGGCCAGGCCCTCTTCAGCAGACATaGCCAGCCCCTCTTCAGCTAGCACCTCTAACCTGTTTGAGGGTA +
Preference number: 1 (lower is better)
Translates to: SGKLNTLWPGPLQQT*PAPLQLAPLTCLRV
Trigger: TACCCTCAAACAGGTTAGAGGTGCTAGCTGAAGAGGGGCTGGGCATGTCTGCTGAAGAGGGCCTGGCCAGAGAGTGTTGAGCTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp GGAAGGAGAGGCTGGCAGGATGACTCAAAGGTAAAAGTAAAGGACTaGTGTGACTCCCCAACATGGCTCGAGCAGGACCTGCTCCCTAAC +
Preference number: 1 (lower is better)
Translates to: GRRGWQDDSKVKVKD*CDSPTWLEQDLLPN
Trigger: GTTAGGGAGCAGGTCCTGCTCGAGCCATGTTGGGGAGTCACACCAGTCCTTTACTTTTACCTTTGAGTCATCCTGCCAGCCTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 90 bp CCTCTAACCTGTTTGAGGGTAGGCGCAAGCAGGGGCATCAGTTTATaGCATCAGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCG +
Preference number: 1 (lower is better)
Translates to: PLTCLRVGASRGISL*HQEPAPQPVLHSFA
Trigger: CGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCTGATGTCATAAACTGATGCCCCTGCTTGCGCCTACCCTCAAACAGGTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp GAGGGTAGGCGCAAGCAGGGGCATCAGTTTATGACATCAGGAACCTaGTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTT +
Preference number: 1 (lower is better)
Translates to: EGRRKQGHQFMTSGT*STACAPFICALWLF
Trigger: AAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCTGATGTCATAAACTGATGCCCCTGCTTGCGCCTACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp CCTTCCTGCACCACAGTGCAGATGGCCTCACCTTTGGACTCCCTGTaGCCATGTGACCCTCACCCATTTATACACCAGCAACAAATGCTT +
Preference number: 1 (lower is better)
Translates to: PSCTTVQMASPLDSL*PCDPHPFIHQQQML
Trigger: AAGCATTTGTTGCTGGTGTATAAATGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp TCAGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATaGCTGTTTCTCAAACCTGCAGCCCAGTACAGCTTCCACAGCACA +
Preference number: 1 (lower is better)
Translates to: SGTCSTACAPFICAL*LFLKPAAQYSFHST
Trigger: TGTGCTGTGGAAGCTGTACTGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp AGCTTGCCCCCAAGGATACTGTTAACCGCCAAACCTATGGTGAAGTaGACCAGCATGGAAGCCACCTGTCTCCAATCCTTCAACATCCCA +
Preference number: 1 (lower is better)
Translates to: SLPPRILLTAKPMVK*TSMEATCLQSFNIP
Trigger: TGGGATGTTGAAGGATTGGAGACAGGTGGCTTCCATGCTGGTGCACTTCACCATAGGTTTGGCGGTTAACAGTATCCTTGGGGGCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp CTATACCACAAGCCTACAATTCTTTCAGGAAAGCTCAACACTCTCTaGCCAGGCCCTCTTCAGCAGACATGCCCAGCCCCTCTTCAGCTA +
Preference number: 1 (lower is better)
Translates to: LYHKPTILSGKLNTL*PGPLQQTCPAPLQL
Trigger: TAGCTGAAGAGGGGCTGGGCATGTCTGCTGAAGAGGGCCTGGCCAGAGAGTGTTGAGCTTTCCTGAAAGAATTGTAGGCTTGTGGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 90 bp CTCCACTTCACAACTTGTTTATTATGGCAGGGCATGGCACGCCCGTaGGTGGGTCCTGACTCCCGTTCTCTGCTTTGGTGTACATTAGAT +
Preference number: 1 (lower is better)
Translates to: LHFTTCLLWQGMARP*VGPDSRSLLWCTLD
Trigger: ATCTAATGTACACCAAAGCAGAGAACGGGAGTCAGGACCCACTCACGGGCGTGCCATGCCCTGCCATAATAAACAAGTTGTGAAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp ACTCCTAAGAAAGAGTCAGGAAGTGCACACGGCACTCAGAACGAATaGCGACTTCACTCTCTTCAGAATGGCCATGGCCAGCATCTTCTG +
Preference number: 1 (lower is better)
Translates to: TPKKESGSAHGTQNE*RLHSLQNGHGQHLL
Trigger: CAGAAGATGCTGGCCATGGCCATTCTGAAGAGAGTGAAGTCGGCATTCGTTCTGAGTGCCGTGTGCACTTCCTGACTCTTTCTTAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 90 bp CAGCACGTCTCTGAATTCCTCACAGACAATGTAGCCATCAGTTACTaGATGGCAATAGCCTCCATGGAAATCGAAGCCAGTGATGGCCTG +
Preference number: 1 (lower is better)
Translates to: QHVSEFLTDNVAISY*MAIASMEIEASDGL
Trigger: CAGGCCATCACTGGCTTCGATTTCCATGGAGGCTATTGCCATCCAGTAACTGATGGCTACATTGTCTGTGAGGAATTCAGAGACGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp ACGTCAATATCTTTCAAATTCCCTTCATTTGCTTTCTACTACTACTaGTCAAAAATCTCTGCTTCTATGTTTTCTCTCCTCAGCTCTAAA +
Preference number: 1 (lower is better)
Translates to: TSISFKFPSFAFYYY*SKISASMFSLLSSK
Trigger: TTTAGAGCTGAGGAGAGAAAACATAGAAGCAGAGATTTTTGAGCAGTAGTAGTAGAAAGCAAATGAAGGGAATTTGAAAGATATTGACGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 90 bp ATGCTTTGGTCCTTACACGTCAATATCTTTCAAATTCCCTTCATTTaGTTTCTACTACTACTGCTCAAAAATCTCTGCTTCTATGTTTTC +
Preference number: 1 (lower is better)
Translates to: MLWSLHVNIFQIPFI*FLLLLLKNLCFYVF
Trigger: GAAAACATAGAAGCAGAGATTTTTGAGCAGTAGTAGTAGAAAGCAAATGAAGGGAATTTGAAAGATATTGACGTGTAAGGACCAAAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 90 bp TGGAAATCGAAGCCAGTGATGGCCTGCACGCAGTCGATGCCCAGCTaGCGTGCCACCCGGTTCAGGTTAGGCAGGGTCATCTGGACACAG +
Preference number: 2 (lower is better)
Translates to: WKSKPVMACTQSMPS*RATRFRLGRVIWTQ
Trigger: CTGTGTCCAGATGACCCTGCCTAACCTGAACCGGGTGGCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR TCA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGAGGTAGCACTGCTCTGTaGGGACAGAGGCTCCACCCT +
Preference number: 2 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRGSTAL*GQRLHP
Trigger: AGGGTGGAGCCTCTGTCCTCACAGAGCAGTGCTACC...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGAAAGTCGTTGTGGTCATaGAGCTGGGGCTCCGAGAGC +
Preference number: 2 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRKSLWS*SWGSES
Trigger: GCTCTCGGAGCCCCAGCTGCATGACCACAACGACTT...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 90 bp TCTGCTCCTTACCCTTCCTGCACCACAGTGCAGATGGCCTCACCTTaGGACTCCCTGTGCCCATGTGACCCTCACCCATTTATACACCAG +
Preference number: 2 (lower is better)
Translates to: SAPYPSCTTVQMASP*DSLCPCDPHPFIHQ
Trigger: CTGGTGTATAAATGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR TCA 90 bp GCAGCAGGCAGTACTGGAAACCTGACTCAGGAAGGCAGGCCTGAAAAGCAAATGGGGTTGGTGTCAGACTaGTCTGCTGCACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: AAGSTGNLTQEGRPEKQMGLVSD*SAAQLP
Trigger: TGGGAGCTGTGCAGCAGATCAGTCTGACACCAACCC...CATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCAGTACTGCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCATCTGCTTGCTGTCTaGCTTCTCTGGCTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDHLLAV*LLWLED
Trigger: GTCCTCCAGCCAGAGAAGGCAGACAGCAAGCAGATG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR CCA 90 bp CTGCAGCCCAGTACAGCTTCCACAGCACAGCCTGGGGCCTCAACAGAATCCCAGTCTTCTGTGTGGACATaGAGGGACTGGTACCATTGT +
Preference number: 2 (lower is better)
Translates to: LQPSTASTAQPGASTESQSSVWT*RDWYHC
Trigger: ACAATGGTACCAGTCCCTCCATGTCCACACAGAAGA...CTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGAAAGCTCAACACTCTCTaGCCAGGCCCTCTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRKLNTL*PGPLQQ
Trigger: CTGCTGAAGAGGGCCTGGCCAGAGAGTGTTGAGCTT...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATAGTCCTCAGCCCATCTaGTTGCTGTCTGCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDSPQPI*LLSAFS
Trigger: AGAGAAGGCAGACAGCAAGCAGATGGGCTGAGGACT...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR GCA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTCCTTTGGACTCCCTGTaGCCATGTGACCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCPLDSL*PCDPHP
Trigger: TGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGG...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp CTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCTTCCACAGCACAGCCTaGGGCCTCAACAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: LQACNEGQSCSCFTVSELFHSTA*GLNRIP
Trigger: TGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAA...GAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp ATGGAAATCGAAGCCAGTGATGGCCTGCACGCAGTCGATGCCCAGCTTGCGTGCTCCCGTTCTCTGCTTTaGTGTACATTAGATTCGAGG +
Preference number: 2 (lower is better)
Translates to: MEIEASDGLHAVDAQLACSRSLL*CTLDSR
Trigger: CCTCGAATCTAATGTACACCAAAGCAGAGAACGGGA...GCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTCCCAACAGCCAAAAGTaGGGGCTGGAGCATGCACTA +
Preference number: 2 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCPNSQK*GLEHAL
Trigger: TAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGGG...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 90 bp TTTCACCATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTaGCTTCAGCCATGTGTCCCTGGAGTGCAAGGTATGCACGCAATC +
Preference number: 2 (lower is better)
Translates to: FHHLIGHFSKPHHSC*LQPCVPGVQGMHAI
Trigger: GATTGCGTGCATACCTTGCACTCCAGGGACACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATGGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR TCA 90 bp CTGATGGGTAGGCAACTCCTAAGAAAGAGTCAGGAAGTGCACACGGCACTCAGAACCATTGTGCGCTGCTaGAGGGAAGGTGAATGGTGT +
Preference number: 2 (lower is better)
Translates to: LMGRQLLRKSQEVHTALRTIVRC*REGEWC
Trigger: ACACCATTCACCTTCCCTTCAGCAGCGCACAATGGT...TCTGAGTGCCGTGTGCACTTCCTGACTCTTTCTTAGGAGTTGCCTACCCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp ATTCTCCCAAGCAGCCAGCAGCACGTCTCTGAATTCCTCACAGACAATGTAGCCATGACATCAGGAACCTaGTCCACAGCCTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ILPSSQQHVSEFLTDNVAMTSGT*STACAP
Trigger: TGGAGCACAGGCTGTGGAGCAGGTTCCTGATGTCAT...GGCTACATTGTCTGTGAGGAATTCAGAGACGTGCTGCTGGCTGCTTGGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp CCAACAGCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGGTAAAAGTAAAGGACTaGTGTGACTCCCCAACATGG +
Preference number: 2 (lower is better)
Translates to: PTAKSGGWSMHYPSKQTAVKVKD*CDSPTW
Trigger: CCATGTTGGGGAGTCACACCAGTCCTTTACTTTTAC...CGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCTATCTCCCAGGAAAGTaGTCCAAACAGCAGCTCACC +
Preference number: 2 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETYLPGK*SKQQLT
Trigger: GGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATA...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR GCA 90 bp CCAACAGCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGCAAATTCCCTTCATTTaGTTTCTACTACTACTGCTC +
Preference number: 2 (lower is better)
Translates to: PTAKSGGWSMHYPSKQTAQIPFI*FLLLLL
Trigger: GAGCAGTAGTAGTAGAAAGCAAATGAAGGGAATTTG...CGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp GGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCCTTTGGTGACTTCTTTTaGCTGAAGTACACAGACACA +
Preference number: 2 (lower is better)
Translates to: GQSCSCFTVSELRAIPQAFGDFF*LKYTDT
Trigger: TGTGTCTGTGTACTTCAGGCAAAAGAAGTCACCAAA...GGCTTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp ATTCTCCCAAGCAGCCAGCAGCACGTCTCTGAATTCCTCACAGACAATGTAGCCCAATTTTCTGCAGTATaGCAAGCATGGACTCAACTA +
Preference number: 2 (lower is better)
Translates to: ILPSSQQHVSEFLTDNVAQFSAV*QAWTQL
Trigger: TAGTTGAGTCCATGCTTGGCATACTGCAGAAAATTG...GGCTACATTGTCTGTGAGGAATTCAGAGACGTGCTGCTGGCTGCTTGGGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGACAGATAAGGCATTGTaGTATACGCCTGTAATCTCA +
Preference number: 2 (lower is better)
Translates to: LKSKCPGSEGEESKRCERTDKAL*YTPVIS
Trigger: TGAGATTACAGGCGTATACCACAATGCCTTATCTGT...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR TCA 90 bp AACAGAGGACTCACCCTCAGGCTGGGTTCCTATGTTTCTCTTCTGTGTTTTCCAGTGACTTCTTTTGCCTaGAGTACACAGACACACTTA +
Preference number: 2 (lower is better)
Translates to: NRGLTLRLGSYVSLLCFPVTSFA*STQTHL
Trigger: TAAGTGTGTCTGTGTACTTCAGGCAAAAGAAGTCAC...TGGAAAACACAGAAGAGAAACATAGGAACCCAGCCTGAGGGTGAGTCCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp CTGATGGGTAGGCAACTCCTAAGAAAGAGTCAGGAAGTGCACACGGCACTCAGACTGCTCAAAAATCTCTaGTTCTATGTTTTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: LMGRQLLRKSQEVHTALRLLKNL*FYVFSP
Trigger: AGGAGAGAAAACATAGAAGCAGAGATTTTTGAGCAG...TCTGAGTGCCGTGTGCACTTCCTGACTCTTTCTTAGGAGTTGCCTACCCATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTGTCAGACTGATCTGCTaGACAGCTCCCATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: KELFPEKSIQQLRKCIISVRLIC*TAPIWP
Trigger: AGGCCAGATGGGAGCTGTGCAGCAGATCAGTCTGAC...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR CCA 90 bp AACAGAGGACTCACCCTCAGGCTGGGTTCCTATGTTTCTCTTCTGTGTTTTCCAACAGCTTTTTGCTCTTaGTCTTTTAGTACACGTTTG +
Preference number: 2 (lower is better)
Translates to: NRGLTLRLGSYVSLLCFPTAFCS*SFSTRL
Trigger: CAAACGTGTACTAAAAGACCAAGAGCAAAAAGCTGT...TGGAAAACACAGAAGAGAAACATAGGAACCCAGCCTGAGGGTGAGTCCTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR GCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTGAAGATTTGTCTCAGTaGTCCAGTACCCATAATTTC +
Preference number: 2 (lower is better)
Translates to: KELFPEKSIQQLRKCIISEDLSQ*SSTHNF
Trigger: GAAATTATGGGTACTGGAGCACTGAGACAAATCTTC...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR GCA 72 bp AGTGATGGCCTGCACGCAGTCGATGCCCAGCTTGCGTaGCACCCGGTTCAGGTTAGGCAGGGTCATCTGGAC +
Preference number: 3 (lower is better)
Translates to: SDGLHAVDAQLA*HPVQVRQGHLD
Trigger: GTCCAGATGACCCTGCCTAACCTGAACCGGGTGGCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp CAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTaGGTTGGTGTCAGACTGATCTGCTGCACAGCTCCC +
Preference number: 3 (lower is better)
Translates to: QQLTSTSLWGSG*VGVRLICCTAP
Trigger: GGGAGCTGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR-3UTR CAA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCCTCAGCCCATCTGCTaGCTGTCTGCCTTCTCTGGC +
Preference number: 3 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRPQPIC*LSAFSG
Trigger: GCCAGAGAAGGCAGACAGCAAGCAGATGGGCTGAGG...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 72 bp GCTCACCAGCACCAGCCTATGGGGATCCGGCTGGGTTaGTGTCAGACTGATCTGCTGCACAGCTCCCATCTG +
Preference number: 3 (lower is better)
Translates to: AHQHQPMGIRLG*CQTDLLHSSHL
Trigger: CAGATGGGAGCTGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCTGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 72 bp GCACTGCTCTGTGAGGACAGAGGCTCCACCCTGCACTaGAGCCATGTCAAAGGACTTCCGACAGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: ALLCEDRGSTLH*SHVKGLPTGAG
Trigger: GCCTGCTCCTGTCGGAAGTCCTTTGACATGGCTCCAGTGCAGGGTGGAGCCTCTGTCCTCACAGAGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp CACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTaGTTGCTGTCTGCCTTCTCTGGCTGGAGGACACTG +
Preference number: 3 (lower is better)
Translates to: HSSHLACSPQPI*LLSAFSGWRTL
Trigger: CAGTGTCCTCCAGCCAGAGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR GCA 72 bp CATCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATaGACTACCCGAGTAAACAAACCGCGGCCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: HRSQQPKVGAGA*TTRVNKPRPLR
Trigger: CCTGAGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp GAGCAGGCTCTGCTCCTTACCCTTCCTGCACCACAGTaGAGATGGCCTCACCTTTGGACTCCCTGTGCCCAT +
Preference number: 3 (lower is better)
Translates to: EQALLLTLPAPQ*RWPHLWTPCAH
Trigger: ATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp GCTCATCCCCTCTATCTCACAGGTAGCACTGCTCTGTaGGGACAGAGGCTCCACCCTGCACTGGAGCCATGT +
Preference number: 3 (lower is better)
Translates to: AHPLYLTGSTAL*GQRLHPALEPC
Trigger: ACATGGCTCCAGTGCAGGGTGGAGCCTCTGTCCTCACAGAGCAGTGCTACCTGTGAGATAGAGGGGATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp CTGGATGGCAATAGCCTCCATGGAAATCGAAGCCAGTaGTGGCCTGCACGCAGTCGATGCCCAGCTTGCGTG +
Preference number: 3 (lower is better)
Translates to: LDGNSLHGNRSQ*WPARSRCPACV
Trigger: CACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCATGGAGGCTATTGCCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp CTCAACACTCTCTGGCCAGGCCCTCTTCAGCAGACATaGCCAGCCCCTCTTCAGCTAGCACCTCTAACCTGT +
Preference number: 3 (lower is better)
Translates to: LNTLWPGPLQQT*PAPLQLAPLTC
Trigger: ACAGGTTAGAGGTGCTAGCTGAAGAGGGGCTGGGCATGTCTGCTGAAGAGGGCCTGGCCAGAGAGTGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp TCCTCCCAGGCTTCACATCACAACTGGAGCAGGCTCTaGTCCTTACCCTTCCTGCACCACAGTGCAGATGGC +
Preference number: 3 (lower is better)
Translates to: SSQASHHNWSRL*SLPFLHHSADG
Trigger: GCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGATGTGAAGCCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp AAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATaGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGC +
Preference number: 3 (lower is better)
Translates to: KWSKQQLTSTSL*GSGWVGVRLIC
Trigger: GCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 72 bp AAACCTGCAGCCCAGTACAGCTTCCACAGCACAGCCTaGGGCCTCAACAGAATCCCAGTAGGCCACACCAGT +
Preference number: 3 (lower is better)
Translates to: KPAAQYSFHSTA*GLNRIPVGHTS
Trigger: ACTGGTGTGGCCTACTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp ATCACAACTGGAGCAGGCTCTGCTCCTTACCCTTCCTaGACCACAGTGCAGATGGCCTCACCTTTGGACTCC +
Preference number: 3 (lower is better)
Translates to: ITTGAGSAPYPS*TTVQMASPLDS
Trigger: GGAGTCCAAAGGTGAGGCCATCTGCACTGTGGTGCAGGAAGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp GTTGGTGTCAGACTGATCTGCTGCACAGCTCCCATCTaGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: VGVRLICCTAPI*PVVLSPSACCL
Trigger: CAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGTGCAGCAGATCAGTCTGACACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CCA 72 bp TCAGAATGGCCATGGCCAGCATCTTCTGTGTGGACATaGAGGGACTGGTACCATTGTGCGCTGCTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: SEWPWPASSVWT*RDWYHCALLKG
Trigger: TCCCTTCAGCAGCGCACAATGGTACCAGTCCCTCCATGTCCACACAGAAGATGCTGGCCATGGCCATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp CTCTCTTCAGAATGGCCATGGCCAGCATCTTCTGTGTaGACATGGAGGGACTGGTACCATTGTGCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LSSEWPWPASSV*TWRDWYHCALL
Trigger: CAGCAGCGCACAATGGTACCAGTCCCTCCATGTCCACACAGAAGATGCTGGCCATGGCCATTCTGAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp ATTATGGCAGGGCATGGCACGCCCGTGAGTGGGTCCTaGCTCCCGTTCTCTGCTTTGGTGTACATTAGATTC +
Preference number: 3 (lower is better)
Translates to: IMAGHGTPVSGS*LPFSALVYIRF
Trigger: GAATCTAATGTACACCAAAGCAGAGAACGGGAGTCAGGACCCACTCACGGGCGTGCCATGCCCTGCCATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp TGTTTGAGGGTAGGCGCAAGCAGGGGCATCAGTTTATaGCATCAGGAACCTGCTCCACAGCCTGTGCTCCAT +
Preference number: 3 (lower is better)
Translates to: CLRVGASRGISL*HQEPAPQPVLH
Trigger: ATGGAGCACAGGCTGTGGAGCAGGTTCCTGATGTCATAAACTGATGCCCCTGCTTGCGCCTACCCTCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp ATCTTCTGTGTGGACATGGAGGGACTGGTACCATTGTaGGCTGCTGAAGGGAAGGTGAATGGTGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: IFCVDMEGLVPL*AAEGKVNGVAT
Trigger: AGTGGCCACACCATTCACCTTCCCTTCAGCAGCGCACAATGGTACCAGTCCCTCCATGTCCACACAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp TCAGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTaGGCTCTATGGCTGTTTCTCAAACCTGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: SGTCSTACAPFI*ALWLFLKPAAQ
Trigger: CTGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp ACCACAGTGCAGATGGCCTCACCTTTGGACTCCCTGTaGCCATGTGACCCTCACCCATTTATACACCAGCAA +
Preference number: 3 (lower is better)
Translates to: TTVQMASPLDSL*PCDPHPFIHQQ
Trigger: TTGCTGGTGTATAAATGGGTGAGGGTCACATGGGCACAGGGAGTCCAAAGGTGAGGCCATCTGCACTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp AAGCCTACAATTCTTTCAGGAAAGCTCAACACTCTCTaGCCAGGCCCTCTTCAGCAGACATGCCCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: KPTILSGKLNTL*PGPLQQTCPAP
Trigger: AGGGGCTGGGCATGTCTGCTGAAGAGGGCCTGGCCAGAGAGTGTTGAGCTTTCCTGAAAGAATTGTAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp AAAGAGTCAGGAAGTGCACACGGCACTCAGAACGAATaGCGACTTCACTCTCTTCAGAATGGCCATGGCCAG +
Preference number: 3 (lower is better)
Translates to: KESGSAHGTQNE*RLHSLQNGHGQ
Trigger: CTGGCCATGGCCATTCTGAAGAGAGTGAAGTCGGCATTCGTTCTGAGTGCCGTGTGCACTTCCTGACTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp GCTTGCTTCAGCCATGTGTCCCTGGAGTGCAAGGTATaGACGCAATCCCTAAGGGAAGACAAAGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: ACFSHVSLECKV*TQSLREDKGKT
Trigger: AGTCTTCCCTTTGTCTTCCCTTAGGGATTGCGTGCATACCTTGCACTCCAGGGACACATGGCTGAAGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp CACTCAGAACGAATGCCGACTTCACTCTCTTCAGAATaGCCATGGCCAGCATCTTCTGTGTGGACATGGAGG +
Preference number: 3 (lower is better)
Translates to: HSERMPTSLSSE*PWPASSVWTWR
Trigger: CCTCCATGTCCACACAGAAGATGCTGGCCATGGCCATTCTGAAGAGAGTGAAGTCGGCATTCGTTCTGAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp TGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATaGCTGTTTCTCAAACCTGCAGCCCAGTACAGCTTC +
Preference number: 3 (lower is better)
Translates to: CSTACAPFICAL*LFLKPAAQYSF
Trigger: GAAGCTGTACTGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CAA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGACTCCCGTTCTCTGCTTaGGTGTACATTAGATTCGAG +
Preference number: 3 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRLPFSA*VYIRFE
Trigger: CTCGAATCTAATGTACACCAAAGCAGAGAACGGGAG...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CAA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGAACACAGACACACTTATaGTTGTGTGTCAACCACCAG +
Preference number: 3 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRTQTHL*LCVNHQ
Trigger: CTGGTGGTTGACACACAACAATAAGTGTGTCTGTGT...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp TCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCTaGCTCAGGAAGGCAGGCCTGAAAAGCAAATGCCCT +
Preference number: 3 (lower is better)
Translates to: SLTKEQQAVLET*LRKAGLKSKCP
Trigger: AGGGCATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR GCA 72 bp CCAAGGATACTGTTAACCGCCAAACCTATGGTGAAGTaGACCAGCATGGAAGCCACCTGTCTCCAATCCTTC +
Preference number: 3 (lower is better)
Translates to: PRILLTAKPMVK*TSMEATCLQSF
Trigger: GAAGGATTGGAGACAGGTGGCTTCCATGCTGGTGCACTTCACCATAGGTTTGGCGGTTAACAGTATCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp CCTGTTCATTCTCCCAAGCAGCCAGCAGCACGTCTCTaGATTCCTCACAGACAATGTAGCCATCAGTTACTG +
Preference number: 3 (lower is better)
Translates to: PVHSPKQPAARL*IPHRQCSHQLL
Trigger: CAGTAACTGATGGCTACATTGTCTGTGAGGAATTCAGAGACGTGCTGCTGGCTGCTTGGGAGAATGAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp CATGTGACCCTCACCCATTTATACACCAGCAACAAATaGTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: HVTLTHLYTSNK*FRPVMRGRAAL
Trigger: AAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAGCATTTGTTGCTGGTGTATAAATGGGTGAGGGTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CAA 90 bp AGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTTCTCAGACACACTTATTGTaGTGTGTCAACCACCAGTCT +
Preference number: 3 (lower is better)
Translates to: RNLLHSLCSIHLRSMAVSQTHLL*CVNHQS
Trigger: AGACTGGTGGTTGACACACAACAATAAGTGTGTCTG...AGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR GCA 72 bp CAACAAATGCTTCAGGCCTGTAATGAGGGGCAGAGCTaGTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATA +
Preference number: 3 (lower is better)
Translates to: QQMLQACNEGQS*SCFTVSELRAI
Trigger: TATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAGCATTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp AGGACCTGCTCCCTAACAGAGGACTCACCCTCAGGCTaGGTTCCTATGTTTCTCTTCTGTGTTTTCCATTTT +
Preference number: 3 (lower is better)
Translates to: RTCSLTEDSPSG*VPMFLFCVFHF
Trigger: AAAATGGAAAACACAGAAGAGAAACATAGGAACCCAGCCTGAGGGTGAGTCCTCTGTTAGGGAGCAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR-3UTR CAA 90 bp AACACACAAGGCAACATCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATGCAAACACTTCTACAGCCTaGTATTTTAACAGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: NTQGNIAPNSQKWGLEHANTSTA*YFNSPV
Trigger: TACAGGACTGTTAAAATACAAGGCTGTAGAAGTGTT...TGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGATGTTGCCTTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CCA 72 bp TCTGAATTCCTCACAGACAATGTAGCCATCAGTTACTaGATGGCAATAGCCTCCATGGAAATCGAAGCCAGT +
Preference number: 3 (lower is better)
Translates to: SEFLTDNVAISY*MAIASMEIEAS
Trigger: ACTGGCTTCGATTTCCATGGAGGCTATTGCCATCCAGTAACTGATGGCTACATTGTCTGTGAGGAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR TCA 72 bp CCACAGCTTTTTGCTCTTGGTCTTTTAGTACACGTTTaGCTGTGCGCTCTCATCTCTTCTTCACAGTATACA +
Preference number: 3 (lower is better)
Translates to: PQLFALGLLVHV*LCALISSSQYT
Trigger: TGTATACTGTGAAGAAGAGATGAGAGCGCACAGTCAAACGTGTACTAAAAGACCAAGAGCAAAAAGCTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGGCTTCCTCCGCTGCCTaGTGCCCGCAGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRASSAA*CPQCLC
Trigger: GCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGC...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp GGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTCAGGCAGGCAACAGAGGCCTGCTGCCCGCAGTaGCTGTGCCTCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GACTTRVNKPRPLRQATEACCPQ*LCLSSP
Trigger: GGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGC...CTCTGTTGCCTGCCTGAGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp CTGCCAGTGACCATAGAGGCCCAAGTCGTTGTGGTCATGCAGCTGGGGCTCCGAACAAGACCAGCCGGGTaGGCAGCTGCAGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: LPVTIEAQVVVVMQLGLRTRPAG*AAAEPE
Trigger: TTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGT...TCGGAGCCCCAGCTGCATGACCACAACGACTTGGGCCTCTATGGTCACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 72 bp AAGCCAGTGATGGCCTGCACGCAGTCGATGCCCAGCTaGCGTGCCACCCGGTTCAGGTTAGGCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: KPVMACTQSMPS*RATRFRLGRVI
Trigger: GATGACCCTGCCTAACCTGAACCGGGTGGCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTTCCCCCTGGCGGTTaGTTTGCCTCTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRLPPGG*FASALR
Trigger: TCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAG...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp TCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAGCTTCCTCCGCTGCCTaGTGCCCGCAGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLPTAKSGGWSMHYPSKQASSAA*CPQCLC
Trigger: GCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGC...TTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp GCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTCCTCCTCTCCCTCGCTaGAAGAGGGCTTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: AKSGGWSMHYPSKQTAASPPLPR*KRASSA
Trigger: AGCGGAGGAAGCCCTCTTGCAGCGAGGGAGAGGAGG...AGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp AGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGGCTGAGGCCCTCTTCTaGTTGCGAGGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RKVVQTAAHQHQPMGIRLAEALF*LRGPGS
Trigger: TGAGCCTGGCCCTCGCAAGCAGAAGAGGGCCTCAGC...CAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTGCAGCCCAGTACAGCTTCCACAGCACAGCCTGGGGCCTCAACAGAATCCCAGCATCAACCCGGCACTTaGGGGTTGCGGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LQPSTASTAQPGASTESQHQPGT*GLRSSR
Trigger: CCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATG...CTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp CCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTCTGGCTTTGTGGTCATGCAGCTaGGGCTCCGAGAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PIWPVVLSPSACCLPSLALWSCS*GSESRA
Trigger: AGCCCGGCTCTCGGAGCCCCAGCTGCATGACCACAA...AGCCAGAGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp ATGGAAATCGAAGCCAGTGATGGCCTGCACGCAGTCGATGCCCAGCTTGCGTGCTGTCCTCTGAGGAGCTaGGGCCCTCTTCTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: MEIEASDGLHAVDAQLACCPLRS*GPLLLA
Trigger: CGCAAGCAGAAGAGGGCCTCAGCTCCTCAGAGGACA...GCACGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp ATGCAGCTGGGGCTCCGAGAGCCGGGCTTTCCGGGCACGGTTAGAGAAGCCTTTTTCAGTGGAATGGGCTaGAGAGACAAGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MQLGLREPGFPGTVREAFFSGMG*RDKTSR
Trigger: CCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAA...AAAGGCTTCTCTAACCGTGCCCGGAAAGCCCGGCTCTCGGAGCCCCAGCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCACTTGCGGGTTaGGGTCATCCAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDPALAG*GHPGWV
Trigger: GACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AGCACCAGCCTATGGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACAAAGCCAGTGATGGCCTaGACGCAGTCGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: STSLWGSGWVGVRLICCTKPVMA*TQSMPS
Trigger: GCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTT...TGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp CCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTCTGGCTTCAAACGGAAAGAGGTaGGAAGCCTCTGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PIWPVVLSPSACCLPSLASNGKR*EASAAR
Trigger: GCGGGCGGCAGAGGCTTCCCACCTCTTTCCGTTTGA...AGCCAGAGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCAACAAGACCAGCCGGGTaGGCAGCTGCAGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: QGSEGISQESGPNSSSPATRPAG*AAAEPE
Trigger: TTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGT...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGAGCCGACGGGCATCATaGTGGGCAGGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: RKVVQTAAHQHQPMGIRLSRRAS*WAGRGT
Trigger: TGTACCTCTTCCTGCCCAGCATGATGCCCGTCGGCT...CAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp AGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGCGACGGGCATCATGCTaGGCAGGAAGAGGTACACGT +
Preference number: 4 (lower is better)
Translates to: RKVVQTAAHQHQPMGIRLRRASC*AGRGTR
Trigger: ACGTGTACCTCTTCCTGCCCAGCATGATGCCCGTCG...CAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp AGCACCAGCCTATGGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACAAGTCATCCCCGTCGCTaGGTGCTTCCTCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: STSLWGSGWVGVRLICCTSHPRR*VLPPSE
Trigger: TTCTGAAGGAGGAAGCACTCAGCGACGGGGATGACT...TGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp GGAGCCATGTCAAAGGACTTCCGACAGGAGCAGGCAAGGCAGCAGGCAGAGAGGACTCTCCTCTTTGTATaGCACCTTGGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: GAMSKDFRQEQARQQAERTLLFV*HLGSHT
Trigger: CGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGT...CCTCTCTGCCTGCTGCCTTGCCTGCTCCTGTCGGAAGTCCTTTGACATGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp GCTCCATTCATTTGCGCTCTATGGCTGTTTCTCAAACCTGCAGCCCAGTACAGCCCGGCACTTGCGGGTTaGGGTCATCCAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: APFICALWLFLKPAAQYSPALAG*GHPGWV
Trigger: GACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGG...GCTGTACTGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCATCAACCCGGCACTTaGGGGTTGCGGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDHQPGT*GLRSSR
Trigger: CCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTAAGTCGTTGTGGTCATaGAGCTGGGGCTCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSKSLWS*SWGSES
Trigger: GCTCTCGGAGCCCCAGCTGCATGACCACAACGACTT...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTAGCAGGCACAGCAGGTaGACCTTGTGCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSSRHSR*TLCMFS
Trigger: GGAGAACATGCACAAGGTTCACCTGCTGTGCCTGCT...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp GCAGCAGGCAGTACTGGAAACCTGACTCAGGAAGGCAGGCCTGAAAAGCAAATGTGTCCTCTGAGGAGCTaGGGCCCTCTTCTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: AAGSTGNLTQEGRPEKQMCPLRS*GPLLLA
Trigger: CGCAAGCAGAAGAGGGCCTCAGCTCCTCAGAGGACA...CATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCAGTACTGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp TCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCGCTGGGTCATACCTCTaGGTAACATCTCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SPRKVVQTAAHQHQPMGIAGSYL*VTSRTQ
Trigger: CTGGGTCCGAGATGTTACTCAGAGGTATGACCCAGC...GATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AATTCTCCTCCCAGGCTTCACATCACAACTGGAGCAGGCTCTGCTCCTTACCCTCTTCCCCCTGGCGGTTaGTTTGCCTCTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: NSPPRLHITTGAGSAPYPLPPGG*FASALR
Trigger: TCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAG...AGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGATGTGAAGCCTGGGAGGAGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGCCTCCTCTCCCTCGCTaGAAGAGGGCTTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERPPLPR*KRASSA
Trigger: AGCGGAGGAAGCCCTCTTGCAGCGAGGGAGAGGAGG...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CACCAGCAACAAATGCTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTTGTTTCGCTGAGGCCCTCTTCTaGTTGCGAGGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HQQQMLQACNEGQSCSCFAEALF*LRGPGS
Trigger: TGAGCCTGGCCCTCGCAAGCAGAAGAGGGCCTCAGC...GAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAGCATTTGTTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp TCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGCACCACTCTTGCTTaGTTCAGCCATGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPRKVVQTAAHQHQPMGIRTTLA*FSHVSL
Trigger: CAGGGACACATGGCTGAAGCAAGCAAGAGTGGTGCG...GATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTCTTTGTATGACACCTTaGCAGCCACACGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSLCMTP*QPHAAS
Trigger: GGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAG...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp GCAGCAGGCAGTACTGGAAACCTGACTCAGGAAGGCAGGCCTGAAAAGCAAATGATCCTCTCGGTTCTGTaGCCAGGAGGCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AAGSTGNLTQEGRPEKQMILSVL*PGGSQD
Trigger: GTCCTGGCTGCCTCCTGGCCACAGAACCGAGAGGAT...CATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCAGTACTGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp TCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCAGGCATGTCAGACGGTaGGGTGGCAGAATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPRKVVQTAAHQHQPMGIRHVRR*GGRIFS
Trigger: GGAGAAAATTCTGCCACCTCACCGTCTGACATGCCT...GATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AGCACCAGCCTATGGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACACGGTTGCTTTGCCTCTaGCCTCAGACAAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: STSLWGSGWVGVRLICCTRLLCL*PQTRFL
Trigger: AAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCG...TGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTGCCAGTGACCATAGAGGCCCAAGTCGTTGTGGTCATGCAGCTGGGGCTCCGACACTGGAAACCTTCTTaGCTCTCTTACAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPVTIEAQVVVVMQLGLRHWKPS*LSYSLK
Trigger: CTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTG...TCGGAGCCCCAGCTGCATGACCACAACGACTTGGGCCTCTATGGTCACTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCAGGCCCAAGTCGTTGTaGTCATGCAGCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETRPKSL*SCSWGS
Trigger: GGAGCCCCAGCTGCATGACCACAACGACTTGGGCCT...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CAA 72 bp AGCATCTTCTGTGTGGACATGGAGGGACTGGTACCATaGTGCGCTGCTGAAGGGAAGGTGAATGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SIFCVDMEGLVP*CAAEGKVNGVA
Trigger: GGCCACACCATTCACCTTCCCTTCAGCAGCGCACAATGGTACCAGTCCCTCCATGTCCACACAGAAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCGTCCTGCTCGCTGGCTaGAAGGTCAGCGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETVLLAG*KVSVDS
Trigger: ACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGAC...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp AGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTTCTGTCCTGCTCGCTGGCTaGAAGGTCAGCGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: RNLLHSLCSIHLRSMAVSVLLAG*KVSVDS
Trigger: ACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGAC...AGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp GGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCCGCTGGGTCATACCTCTaGGTAACATCTCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GQSCSCFTVSELRAIPQAAGSYL*VTSRTQ
Trigger: CTGGGTCCGAGATGTTACTCAGAGGTATGACCCAGC...GGCTTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGGGTCCCCTGGATCACTaGAGCCCCTCTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERGPLDH*SPSSSF
Trigger: GAAAGAGGAAGAGGGGCTGCAGTGATCCAGGGGACC...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTGGTCCCCTGGATCACTaGAGCCCCTCTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCGPLDH*SPSSSF
Trigger: GAAAGAGGAAGAGGGGCTGCAGTGATCCAGGGGACC...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTTGGTCCACCACCTTaGTTTTTGGGTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRLGPPP*FLGVSL
Trigger: CAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAG...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp TCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCTGTCATCTTCATCAGTaGCTTGGTCCACCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SPRKVVQTAAHQHQPMGICHLHQ*LGPPPC
Trigger: GCAAGGTGGTGGACCAAGGCACTGATGAAGATGACA...GATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCACACACACCCACTTTaGCTGTGGCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDHTHPL*LWLTVH
Trigger: GTGTACTGTGAGCCACAGGCAAAGTGGGTGTGTGTG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp GGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTCAGGCAGGCAACAGAGAAGGAGGATGCCTCATaGACCTGGAATAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: GACTTRVNKPRPLRQATEKEDAS*TWNRLL
Trigger: AAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTT...CTCTGTTGCCTGCCTGAGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp CTGCAGCCCAGTACAGCTTCCACAGCACAGCCTGGGGCCTCAACAGAATCCCAGCTACAGATGTCTCCTTaGAAGATTTCCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQPSTASTAQPGASTESQLQMSP*KISSPL
Trigger: CAAAGGGGAGGAAATCTTCCAAGGAGACATCTGTAG...CTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp AGCACCAGCCTATGGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACACTTCTGCTTGTGAACTaGTCCCTTCCTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: STSLWGSGWVGVRLICCTLLLVN*SLPLHQ
Trigger: CTGATGAAGAGGAAGGGACCAGTTCACAAGCAGAAG...TGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CAA 72 bp CTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTaGCTTCAGCCATGTGTCCCTGGAGTGCAAGGTATG +
Preference number: 4 (lower is better)
Translates to: LIGHFSKPHHSC*LQPCVPGVQGM
Trigger: CATACCTTGCACTCCAGGGACACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp GGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCCAGGCATGTCAGACGGTaGGGTGGCAGAATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQSCSCFTVSELRAIPQARHVRR*GGRIFS
Trigger: GGAGAAAATTCTGCCACCTCACCGTCTGACATGCCT...GGCTTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTCCCCTTTGTCACAGCTaGCTTCAGTGGAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCPLCHS*LQWNGL
Trigger: CAGCCCATTCCACTGAAGTCAGCTGTGACAAAGGGG...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp GCAGCAGGCAGTACTGGAAACCTGACTCAGGAAGGCAGGCCTGAAAAGCAAATGACTCTCCTCTTTGTATaGCACCTTGGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: AAGSTGNLTQEGRPEKQMTLLFV*HLGSHT
Trigger: CGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGT...CATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCAGTACTGCCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCAGTTTCTTTGCCTTCTTaGAGTCAGCTGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QGSEGISQESGPNSSSPAVSLPS*SQLVSP
Trigger: GGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAAC...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCTGGCTGTCGGCAGATaGTATTTCGATAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDLAVGR*YFDRSH
Trigger: GTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGTTCAGTGGAATGGGCTaGAGAGACAAGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERFSGMG*RDKTSR
Trigger: CCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAA...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGAGCCATCACTGTCAATaGCTACAACATAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: RKVVQTAAHQHQPMGIRLSHHCQ*LQHRSW
Trigger: CCATGACCTATGTTGTAGGCATTGACAGTGATGGCT...CAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGTTCGATAGAAGCCACTaGCCAGCAGGCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERFDRSH*PAGTAG
Trigger: ACCTGCTGTGCCTGCTGGCCAGTGGCTTCTATCGAA...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGTCCTCCTTTCCAAGGTaGTCTGCAGGTCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERSSFPR*SAGRPA
Trigger: AGCAGGACGACCTGCAGACCACCTTGGAAAGGAGGA...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp CACCAGCAACAAATGCTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTTGTTTCTCCTCCTTTCCAAGGTaGTCTGCAGGTCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HQQQMLQACNEGQSCSCFSSFPR*SAGRPA
Trigger: AGCAGGACGACCTGCAGACCACCTTGGAAAGGAGGA...GAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAGCATTTGTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp AGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTTCTCTTTGTATGACACCTTaGCAGCCACACGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RNLLHSLCSIHLRSMAVSLCMTP*QPHAAS
Trigger: GGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAG...AGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 72 bp ATCAGGAACCTGCTCCACAGCCTGTGCTCCATTCATTaGCGCTCTATGGCTGTTTCTCAAACCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IRNLLHSLCSIH*RSMAVSQTCSP
Trigger: TGGGCTGCAGGTTTGAGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp AATTCTCCTCCCAGGCTTCACATCACAACTGGAGCAGGCTCTGCTCCTTACCCTCGGTTGCTTTGCCTCTaGCCTCAGACAAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NSPPRLHITTGAGSAPYPRLLCL*PQTRFL
Trigger: AAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCG...AGGGTAAGGAGCAGAGCCTGCTCCAGTTGTGATGTGAAGCCTGGGAGGAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCAAGCAGGTTTCCTATCTaGCATCTCTTCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: QGSEGISQESGPNSSSPASRFPI*HLFSTT
Trigger: AGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGCT...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CACCAGCAACAAATGCTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTTGTTTCCACACACACCCACTTTaGCTGTGGCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: HQQQMLQACNEGQSCSCFHTHPL*LWLTVH
Trigger: GTGTACTGTGAGCCACAGGCAAAGTGGGTGTGTGTG...GAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAGCATTTGTTGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp TTCAGGTTAGGCAGGGTCATCTGGACACAGCCGACGGGCATCATGCTGGGCAGGTTCTTTCGCCTGCTGTaGTGTTTCAATTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: FRLGRVIWTQPTGIMLGRFFRLL*CFNFNL
Trigger: GAGATTGAAATTGAAACACCACAGCAGGCGAAAGAA...CCTGCCCAGCATGATGCCCGTCGGCTGTGTCCAGATGACCCTGCCTAACCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp GGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCCCCCTCGCAGAGTAAATaGCAATCCTCCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GQSCSCFTVSELRAIPQAPSQSK*QSSFPR
Trigger: CCTTGGAAAGGAGGATTGCCATTTACTCTGCGAGGG...GGCTTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATTGGAATTTCAAGAGGTaGCGCTTCAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDWNFKR*RFRAYR
Trigger: TCTGTATGCCCTGAAGCGCCACCTCTTGAAATTCCA...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp TCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAATGGAATTTCAAGAGGTaGCGCTTCAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: SLPTAKSGGWSMHYPSKQWNFKR*RFRAYR
Trigger: TCTGTATGCCCTGAAGCGCCACCTCTTGAAATTCCA...TTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp AACAGAGGACTCACCCTCAGGCTGGGTTCCTATGTTTCTCTTCTGTGTTTTCCAAGTCATCCCCGTCGCTaGGTGCTTCCTCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NRGLTLRLGSYVSLLCFPSHPRR*VLPPSE
Trigger: TTCTGAAGGAGGAAGCACTCAGCGACGGGGATGACT...TGGAAAACACAGAAGAGAAACATAGGAACCCAGCCTGAGGGTGAGTCCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATTCTCCTTCTTTTCAATaGTGGCCTGTTCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDSPSFQ*WPVHSP
Trigger: GGGAGAATGAACAGGCCATCATTGAAAAGAAGGAGA...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp AGGAACCTGCTCCACAGCCTGTGCTCCATTCATTTGCGCTCTATGGCTGTTTCTGTTTCTTTGCCTTCTTaGAGTCAGCTGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RNLLHSLCSIHLRSMAVSVSLPS*SQLVSP
Trigger: GGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAAC...AGAAACAGCCATAGAGCGCAAATGAATGGAGCACAGGCTGTGGAGCAGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp GAGGGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCACCTGGAATAGACTaGTTCTCCACGACAATACCC +
Preference number: 4 (lower is better)
Translates to: EGQSCSCFTVSELRAIPQAPGID*FSTTIP
Trigger: GGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGC...TTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp GAGGGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAAATGGCCAGCAGATCTaGCTGTCGGCAGATGCTATT +
Preference number: 4 (lower is better)
Translates to: EGQSCSCFTVSELRAIPQNGQQI*LSADAI
Trigger: AATAGCATCTGCCGACAGCCAGATCTGCTGGCCATT...TTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp CAACTCCTAAGAAAGAGTCAGGAAGTGCACACGGCACTCAGAACGAATGCCGACCTGACTTCAGTGGAATaGGCTGCAGAGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: QLLRKSQEVHTALRTNADLTSVE*AAETRP
Trigger: TGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAG...GTCGGCATTCGTTCTGAGTGCCGTGTGCACTTCCTGACTCTTTCTTAGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp GCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTTTTGTTGTGGCTTTCTaGACTGTTACTAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: AKSGGWSMHYPSKQTAASFVVAF*TVTREF
Trigger: GAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAA...AGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTGCCTGCTGCCCGCAGTaGCTGTGCCTCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISACCPQ*LCLSSP
Trigger: GGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGC...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGCACTGGAAACCTTCTTaGCTCTCTTACAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKSKCPGSEGEESKRCERHWKPS*LSYSLK
Trigger: CTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTG...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTTCAGGCCTGTAATGAGGGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGCCATCACTGTCAATaGCTACAACATAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LQACNEGQSCSCFTVSELSHHCQ*LQHRSW
Trigger: CCATGACCTATGTTGTAGGCATTGACAGTGATGGCT...GAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTCATTACAGGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCATCCCTGGAATAGACTaGTTCTCCACGACAATACCC +
Preference number: 4 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETIPGID*FSTTIP
Trigger: GGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGGAT...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp ATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCACCACCTTGCTTTTTaGGTGTTTCTTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISQESGPNSSSPAPAYGDHHLAF*VFLCLL
Trigger: AAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTG...ATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGACACCACCTTGCTTTTTaGGTGTTTCTTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRHHLAF*VFLCLL
Trigger: AAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTG...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTTTCTTTCGCCTGCTGTaGTGTTTCAATTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSFFRLL*CFNFNL
Trigger: GAGATTGAAATTGAAACACCACAGCAGGCGAAAGAA...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACTTGGTAAAGCGAATTaGAATGATGGAGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QGSEGISQESGPNSSSPALGKAN*NDGEAN
Trigger: ATTGGCCTCTCCATCATTCCAATTCGCTTTACCAAG...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp TGGGCAGGAAGAGGTACACGTTCCCAAACTCATTCCGAGGCACCTTCCCATCGACTTGGTAAAGCGAATTaGAATGATGGAGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: WAGRGTRSQTHSEAPSHRLGKAN*NDGEAN
Trigger: ATTGGCCTCTCCATCATTCCAATTCGCTTTACCAAG...TCGATGGGAAGGTGCCTCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp AACACACAAGGCAACATCGCTCCCAACAGCCAAAAGTGGGGGCTGGAGCATGCACATAGGTCATGGGTTTaGTGGCATATTTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: NTQGNIAPNSQKWGLEHAHRSWV*WHICNR
Trigger: CCTGTTACAAATATGCCACCAAACCCATGACCTATG...TGCATGCTCCAGCCCCCACTTTTGGCTGTTGGGAGCGATGTTGCCTTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCAGGGCATACAGAGGGTaGTTCTTGTATGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETRAYRG*FLYVLM
Trigger: CATCAGCACATACAAGAACCACCCTCTGTATGCCCT...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp GAGGGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAAGGGCATACAGAGGGTaGTTCTTGTATGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: EGQSCSCFTVSELRAIPQRAYRG*FLYVLM
Trigger: CATCAGCACATACAAGAACCACCCTCTGTATGCCCT...TTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
3UTR CAA 72 bp TTGTTGTGTGTCAACCACCAGTCTCCACTTCACAACTaGTTTATTATGGCAGGGCATGGCACGCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLCVNHQSPLHN*FIMAGHGTPVS
Trigger: ACTCACGGGCGTGCCATGCCCTGCCATAATAAACAAGTTGTGAAGTGGAGACTGGTGGTTGACACACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp ACAAGAGGTGACCTGCGTTCTCTGACAAAAGAGCAGCAGGCAGTACTGGAAACCCATAGGTCATGGGTTTaGTGGCATATTTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: TRGDLRSLTKEQQAVLETHRSWV*WHICNR
Trigger: CCTGTTACAAATATGCCACCAAACCCATGACCTATG...GGTTTCCAGTACTGCCTGCTGCTCTTTTGTCAGAGAACGCAGGTCACCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CTGAAGTACACAGACACACTTATTGTTGTGTGTCAACCACCAGTCTCCACTTCACTGGCTGTCGGCAGATaGTATTTCGATAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LKYTDTLIVVCQPPVSTSLAVGR*YFDRSH
Trigger: GTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAG...TGAAGTGGAGACTGGTGGTTGACACACAACAATAAGTGTGTCTGTGTACTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR GCA 90 bp ACACAGACACACTTATTGTTGTGTGTCAACCACCAGTCTCCACTTCACAACTTGAGCAGGTTTCCTATCTaGCATCTCTTCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: TQTHLLLCVNHQSPLHNLSRFPI*HLFSTT
Trigger: AGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGCT...CAAGTTGTGAAGTGGAGACTGGTGGTTGACACACAACAATAAGTGTGTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR TCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTCCCCTTTGTCACAGCTaGCTTCAGTGGAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISPLCHS*LQWNGL
Trigger: CAGCCCATTCCACTGAAGTCAGCTGTGACAAAGGGG...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR TCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTGGCTGCTTCTGCTTGTaGACTGGTCCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISGCFCL*TGPFLF
Trigger: GAAGAGGAAGGGACCAGTTCACAAGCAGAAGCAGCC...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
3UTR CAA 72 bp CCCACAGCTTTTTGCTCTTGGTCTTTTAGTACACGTTaGACTGTGCGCTCTCATCTCTTCTTCACAGTATAC +
Preference number: 4 (lower is better)
Translates to: PTAFCSWSFSTR*TVRSHLFFTVY
Trigger: GTATACTGTGAAGAAGAGATGAGAGCGCACAGTCAAACGTGTACTAAAAGACCAAGAGCAAAAAGCTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTCTCGGACTTCTGTTCTaGATCCTCTCGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISLGLLF*ILSVLW
Trigger: CCACAGAACCGAGAGGATCCAGAACAGAAGTCCGAG...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTAATGGCCAGCAGATCTaGCTGTCGGCAGATGCTATT +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISNGQQI*LSADAI
Trigger: AATAGCATCTGCCGACAGCCAGATCTGCTGGCCATT...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTCCCTCGCAGAGTAAATaGCAATCCTCCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISPSQSK*QSSFPR
Trigger: CCTTGGAAAGGAGGATTGCCATTTACTCTGCGAGGG...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTCTGACTTCAGTGGAATaGGCTGCAGAGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISLTSVE*AAETRP
Trigger: TGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAG...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR GCA 90 bp CCTTCATTTGCTTTCTACTACTACTGCTCAAAAATCTCTGCTTCTATGTTTTCTTGTCATCTTCATCAGTaGCTTGGTCCACCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PSFAFYYYCSKISASMFSCHLHQ*LGPPPC
Trigger: GCAAGGTGGTGGACCAAGGCACTGATGAAGATGACA...AGAAAACATAGAAGCAGAGATTTTTGAGCAGTAGTAGTAGAAAGCAAATGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTCTACAGATGTCTCCTTaGAAGATTTCCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISLQMSP*KISSPL
Trigger: CAAAGGGGAGGAAATCTTCCAAGGAGACATCTGTAG...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CCA 90 bp AAAGAACTCTTTCCTGAGAAGAGCATACAGCAGCTTAGAAAATGTATCATCAGTTTTGTTGTGGCTTTCTaGACTGTTACTAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KELFPEKSIQQLRKCIISFVVAF*TVTREF
Trigger: GAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAA...ACTGATGATACATTTTCTAAGCTGCTGTATGCTCTTCTCAGGAAAGAGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 90 bp CTCCCTCGCTGCAAGAGGGCTTCCTCCGCTGCCTGCTGCCCGCAGTaGCTGTGCCTCTCTTCCCCCTGGCGGTTGCTTTGCCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPRCKRASSAACCPQ*LCLSSPWRLLCLCP
Trigger: AGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGCCCTCTTGCAGCGAGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp TTCTGCTCGGCCTCCTCTCCCTCGCTGCAAGAGGGCTTCCTCCGCTaGCTGCTGCCCGCAGTGCCTGTGCCTCTCTTCCCCCTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: FCSASSPSLQEGFLR*LLPAVPVPLFPLAV
Trigger: AACCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGCCCTCTTGCAGCGAGGGAGAGGAGGCCGAGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GACACCTTGGCAGCCACACGCCGCTTCCGGGCATGTGGACGGCCCTaGACTTTCTGCTCGGCCTCCTCTCCCTCGCTGCAAGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: DTLAATRRFRACGRP*TFCSASSPSLQEGF
Trigger: GAAGCCCTCTTGCAGCGAGGGAGAGGAGGCCGAGCAGAAAGTCCAGGGCCGTCCACATGCCCGGAAGCGGCGTGTGGCTGCCAAGGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 90 bp GTCAGAGCCGCTGCCTGCCCCATCGCTCTCACTCTCCTCTTTGTATaGCACCTTGGCAGCCACACGCCGCTTCCGGGCATGTGGACGGCC +
Preference number: 5 (lower is better)
Translates to: VRAAACPIALTLLFV*HLGSHTPLPGMWTA
Trigger: GGCCGTCCACATGCCCGGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAGCGATGGGGCAGGCAGCGGCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp CGCTGCCTGCCCCATCGCTCTCACTCTCCTCTTTGTATGACACCTTaGCAGCCACACGCCGCTTCCGGGCATGTGGACGGCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: RCLPHRSHSPLCMTP*QPHAASGHVDGPGL
Trigger: AAGTCCAGGGCCGTCCACATGCCCGGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAGCGATGGGGCAGGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GGCCAGGCTCACAATCCTCATCAGAGGAATGCTGGCCCTCCCCACTaGACGGTTCAAAGTCAGAGCCGCTGCCTGCCCCATCGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: GQAHNPHQRNAGPPH*TVQSQSRCLPHRSH
Trigger: GTGAGAGCGATGGGGCAGGCAGCGGCTCTGACTTTGAACCGTCCAGTGGGGAGGGCCAGCATTCCTCTGATGAGGATTGTGAGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGTCTTCCCCCTGGCGGTaGCTTTGCCTCTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRSSPWR*LCLCPQ
Trigger: CTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGA...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp GGAGCCATGTCAAAGGACTTCCGACAGGAGCAGGCAAGGCAGCAGGCAGAGAGGTCTTCCCCCTGGCGGTaGCTTTGCCTCTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GAMSKDFRQEQARQQAERSSPWR*LCLCPQ
Trigger: CTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGA...CCTCTCTGCCTGCTGCCTTGCCTGCTCCTGTCGGAAGTCCTTTGACATGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CCAACAGCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGCCCGGCACTTGCGGGTaGCGGTCATCCAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PTAKSGGWSMHYPSKQTAPGTCG*RSSRLG
Trigger: ACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGG...CGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGCTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS CCA 90 bp TCCTCCGCTGCCTGCTGCCCGCAGTGCCTGTGCCTCTCTTCCCCCTaGCGGTTGCTTTGCCTCTGCCCTCAGACAAGGTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SSAACCPQCLCLSSP*RLLCLCPQTRFLLL
Trigger: AAGAAGAAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGCAGCGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp TTCTGCTTGCGAGGGCCAGGCTCACAATCCTCATCAGAGGAATGCTaGCCCTCCCCACTGGACGGTTCAAAGTCAGAGCCGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: FCLRGPGSQSSSEEC*PSPLDGSKSEPLPA
Trigger: GGCAGGCAGCGGCTCTGACTTTGAACCGTCCAGTGGGGAGGGCCAGCATTCCTCTGATGAGGATTGTGAGCCTGGCCCTCGCAAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp AGCACCAGCCTATGGGGATCCGGCTGGGTTGGTGTCAGACTGATCTGCTGCACAGAGGCCCTCTTCTGCTaGCGAGGGCCAGGCTCACAA +
Preference number: 5 (lower is better)
Translates to: STSLWGSGWVGVRLICCTEALFC*RGPGSQ
Trigger: TTGTGAGCCTGGCCCTCGCAAGCAGAAGAGGGCCTC...TGTGCAGCAGATCAGTCTGACACCAACCCAGCCGGATCCCCATAGGCTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 90 bp CTCTTCTGCTTGCGAGGGCCAGGCTCACAATCCTCATCAGAGGAATaGTGGCCCTCCCCACTGGACGGTTCAAAGTCAGAGCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LFCLRGPGSQSSSEE*WPSPLDGSKSEPLP
Trigger: AGGCAGCGGCTCTGACTTTGAACCGTCCAGTGGGGAGGGCCAGCATTCCTCTGATGAGGATTGTGAGCCTGGCCCTCGCAAGCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp CGCCCGCCTCTTCCGAGTCATCTTAGTGTACTCGGACTTCTGTTCTaGATCCTCTCGGTTCTGTGGCCAGGAGGCAGCCAGGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: RPPLPSHLSVLGLLF*ILSVLWPGGSQDSG
Trigger: GCCAGAGTCCTGGCTGCCTCCTGGCCACAGAACCGAGAGGATCCAGAACAGAAGTCCGAGTACACTAAGATGACTCGGAAGAGGCGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTGCATCAACCCGGCACTaGCGGGTTGCGGTCATCCAG +
Preference number: 5 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSASTRH*RVAVIQ
Trigger: CTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGC...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 90 bp AGGAATGCTGGCCCTCCCCACTGGACGGTTCAAAGTCAGAGCCGCTaGCTGCCCCATCGCTCTCACTCTCCTCTTTGTATGACACCTTGG +
Preference number: 5 (lower is better)
Translates to: RNAGPPHWTVQSQSR*LPHRSHSPLCMTPW
Trigger: CCAAGGTGTCATACAAAGAGGAGAGTGAGAGCGATGGGGCAGGCAGCGGCTCTGACTTTGAACCGTCCAGTGGGGAGGGCCAGCATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp CAAGGTCTCAGCCCACCACTCAGCATCAACCCGGCACTTGCGGGTTaGGGTCATCCAGGCTGGGTCATACCTCTGAGTAACATCTCGGAC +
Preference number: 5 (lower is better)
Translates to: QGLSPPLSINPALAG*GHPGWVIPLSNISD
Trigger: GTCCGAGATGTTACTCAGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCTGAGACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp TTCCTCTTCATCAGAAGAGAGTCCGCCTCCAGCAGCATGGGGAGCTaGTGCCTCGCTCTTGGCCCCATAGCGGAGTTTCAGCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: FLFIRRESASSSMGS*CLALGPIAEFQPLS
Trigger: AGAGAGAGGCTGAAACTCCGCTATGGGGCCAAGAGCGAGGCAGCAGCTCCCCATGCTGCTGGAGGCGGACTCTCTTCTGATGAAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS CCA 90 bp CCACTCAGCATCAACCCGGCACTTGCGGGTTGCGGTCATCCAGGCTaGGTCATACCTCTGAGTAACATCTCGGACCCAGCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: PLSINPALAGCGHPG*VIPLSNISDPAITV
Trigger: GACAGTGATGGCTGGGTCCGAGATGTTACTCAGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGCTGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GTGGCCAGGAGGCAGCCAGGACTCTGGCTGCTTCTGCTTGTGAACTaGTCCCTTCCTCTTCATCAGAAGAGAGTCCGCCTCCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VARRQPGLWLLLLVN*SLPLHQKRVRLQQH
Trigger: ATGCTGCTGGAGGCGGACTCTCTTCTGATGAAGAGGAAGGGACCAGTTCACAAGCAGAAGCAGCCAGAGTCCTGGCTGCCTCCTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGCCCGGCACTTGCGGGTaGCGGTCATCCAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LKSKCPGSEGEESKRCERPGTCG*RSSRLG
Trigger: ACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGG...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCTGCCGCACCACTCTTGCTaGCTTCAGCCATGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: RKVVQTAAHQHQPMGIRLPHHSC*LQPCVP
Trigger: AGGGACACATGGCTGAAGCAAGCAAGAGTGGTGCGG...CAGCCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp GGGCAGAGCTGCTCTTGTTTCACTGTCTCTGAGCTCAGAGCTATACCACAAGCCGCATCAACCCGGCACTaGCGGGTTGCGGTCATCCAG +
Preference number: 5 (lower is better)
Translates to: GQSCSCFTVSELRAIPQAASTRH*RVAVIQ
Trigger: CTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGC...GGCTTGTGGTATAGCTCTGAGCTCAGAGACAGTGAAACAAGAGCAGCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS TCA 90 bp ACCCGGCACTTGCGGGTTGCGGTCATCCAGGCTGGGTCATACCTCTaGGTAACATCTCGGACCCAGCCATCACTGTCAATGCCTACAACA +
Preference number: 5 (lower is better)
Translates to: TRHLRVAVIQAGSYL*VTSRTQPSLSMPTT
Trigger: TGTTGTAGGCATTGACAGTGATGGCTGGGTCCGAGATGTTACTCAGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp GAAGATTTCCTCCCCTTTGTCACAGCTGACTTCAGTGGAATGGGCTaGAGAGACAAGACCAGCCGGGTGAGCAGCTGCAGAGCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: EDFLPFVTADFSGMG*RDKTSRVSSCRARR
Trigger: TCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAGCTGTGACAAAGGGGAGGAAATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp GCCACCAGGAAGACAAGGAGGATGCCTCATGCACCTGGAATAGACTaGTTCTCCACGACAATACCCGAGCACCGCAGCTGTCTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: ATRKTRRMPHAPGID*FSTTIPEHRSCLRV
Trigger: TACCCTGAGACAGCTGCGGTGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTTGTCTTCCTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS CCA 90 bp CCTGAAGAGCTTGAAGACGCCTCCGGAAAGCTTGACGGCTCACACTaGCTTCCGCGTTGGGTCTTGGAAGCACTCTTAGACCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PEELEDASGKLDGSH*LPRWVLEALLDPAF
Trigger: AAAGGCTGGGTCTAAGAGTGCTTCCAAGACCCAACGCGGAAGCCAGTGTGAGCCGTCAAGCTTTCCGGAGGCGTCTTCAAGCTCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GCCCACCACACCATGTACACAGTCCACACACACCCACTTTGCCTGTaGCTCACAGTACACCTCCAGCCACTGGTCTACACCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: AHHTMYTVHTHPLCL*LTVHLQPLVYTSRF
Trigger: AAACCTGCTGGTGTAGACCAGTGGCTGGAGGTGTACTGTGAGCCACAGGCAAAGTGGGTGTGTGTGGACTGTGTACATGGTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp AAGGTACCAGGCCACCAGGAAGACAAGGAGGATGCCTCATGCACCTaGAATAGACTGCTTCTCCACGACAATACCCGAGCACCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KVPGHQEDKEDASCT*NRLLLHDNTRAPQL
Trigger: CAGCTGCGGTGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTTGTCTTCCTGGTGGCCTGGTACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGTGTTTCTTTGCCTTCTaGCAGTCAGCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRCFFAF*QSAGES
Trigger: GGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACA...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp GCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTCTGCTGGTCGTAGGTTaGTTGTGGCTTTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: AKSGGWSMHYPSKQTAASLLVVG*LWLSGL
Trigger: CAGTCCAGAAAGCCACAACAAACCTACGACCAGCAG...AGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp GCCAAAAGTGGGGGCTGGAGCATGCACTACCCGAGTAAACAAACCGCGGCCTCTCTCTCACTCTCCTCTTaGTATGACACCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AKSGGWSMHYPSKQTAASLSLSS*YDTLAA
Trigger: GGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAG...AGAGGCCGCGGTTTGTTTACTCGGGTAGTGCATGCTCCAGCCCCCACTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTGAGGCCCTCTTCTGCTaGCGAGGGCCAGGCTCACAA +
Preference number: 5 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCEALFC*RGPGSQ
Trigger: TTGTGAGCCTGGCCCTCGCAAGCAGAAGAGGGCCTC...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS TCA 90 bp CACCTTGCTTTTTGGGTGTTTCTTTGCCTTCTTGCAGTCAGCTGGTaGGTCCCCGCAACGCTCTCCTCGTGCCGGGCTACTTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: HLAFWVFLCLLAVSW*VPATLSSCRATLLS
Trigger: GGACAACAAAGTAGCCCGGCACGAGGAGAGCGTTGCGGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206476.2
CDS-3UTR CAA 90 bp CCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCCGGCCACCACCTTGCTTTTaGGGTGTTTCTTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PRKVVQTAAHQHQPMGIRPPPCF*GVSLPS
Trigger: AGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGG...CCGGATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp TTCAGGTTAGGCAGGGTCATCTGGACACAGCCGACGGGCATCATGCTGGGCAGGAAGATTTCCTCCCCTTaGTCACAGCTGACTTCAGTG +
Preference number: 5 (lower is better)
Translates to: FRLGRVIWTQPTGIMLGRKISSP*SQLTSV
Trigger: CACTGAAGTCAGCTGTGACAAAGGGGAGGAAATCTT...CCTGCCCAGCATGATGCCCGTCGGCTGTGTCCAGATGACCCTGCCTAACCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS GCA 90 bp TACTGTAAGGTACCAGGCCACCAGGAAGACAAGGAGGATGCCTCATaGACCTGGAATAGACTGCTTCTCCACGACAATACCCGAGCACCG +
Preference number: 5 (lower is better)
Translates to: YCKVPGHQEDKEDAS*TWNRLLLHDNTRAP
Trigger: CGGTGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTTGTCTTCCTGGTGGCCTGGTACCTTACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS CCA 90 bp CCAGCAGATCTGGCTGTCGGCAGATGCTATTTCGATAGAAGCCACTaGCCAGCAGGCACAGCAGGTGAACCTTGTGCATGTTCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: PADLAVGRCYFDRSH*PAGTAGEPCACSPV
Trigger: TACAGGAGAACATGCACAAGGTTCACCTGCTGTGCCTGCTGGCCAGTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAGATCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp ATAGCCTGGAATTTCAAGAGGTGGCGCTTCAGGGCATACAGAGGGTaGTTCTTGTATGTGCTGATGGAGGTGGGCAAAGGCTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IAWNFKRWRFRAYRG*FLYVLMEVGKGWSR
Trigger: CCTGGACCAGCCTTTGCCCACCTCCATCAGCACATACAAGAACCACCCTCTGTATGCCCTGAAGCGCCACCTCTTGAAATTCCAGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp CTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTGTCCCTaGAGTGCAAGGTATGCACGCAATCCCTGGAATAGACTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLQAAPLLLASAMCP*SARYARNPWNRLLL
Trigger: GAGAAGCAGTCTATTCCAGGGATTGCGTGCATACCTTGCACTCCAGGGACACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACTCTCACTCTCCTCTTaGTATGACACCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: QGSEGISQESGPNSSSPALSLSS*YDTLAA
Trigger: GGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAG...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS TCA 90 bp AATCCTCCTTTCCAAGGTGGTCTGCAGGTCGTCCTGCTCGCTGGCTaGAAGGTCAGCGTTGACAGTGAAGGTTCCGATGAACCACTTTAC +
Preference number: 5 (lower is better)
Translates to: NPPFQGGLQVVLLAG*KVSVDSEGSDEPLY
Trigger: GTAAAGTGGTTCATCGGAACCTTCACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGACGACCTGCAGACCACCTTGGAAAGGAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 90 bp CAGCTGACTTCAGTGGAATGGGCTGCAGAGACAAGACCAGCCGGGTaGGCAGCTGCAGAGCCCGAAGAATCAGAAGAAATATATGGACCA +
Preference number: 5 (lower is better)
Translates to: QLTSVEWAAETRPAG*AAAEPEESEEIYGP
Trigger: TGGTCCATATATTTCTTCTGATTCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GGTAAAGCGAATTGGAATGATGGAGAGGCCAATGGCCAGCAGATCTaGCTGTCGGCAGATGCTATTTCGATAGAAGCCACTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GKANWNDGEANGQQI*LSADAISIEATGQQ
Trigger: CTGCTGGCCAGTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAGATCTGCTGGCCATTGGCCTCTCCATCATTCCAATTCGCTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CTGCAGCCCAGTACAGCTTCCACAGCACAGCCTGGGGCCTCAACAGAATCCCAGTCCTCCTTCAGAACCTaGAGATTCTTGGATTTAGCA +
Preference number: 5 (lower is better)
Translates to: LQPSTASTAQPGASTESQSSFRT*RFLDLA
Trigger: TGCTAAATCCAAGAATCTCAAGGTTCTGAAGGAGGA...CTGGGATTCTGTTGAGGCCCCAGGCTGTGCTGTGGAAGCTGTACTGGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp ACAGCTCCCATCTGGCCTGTAGTCCTCAGCCCATCTGCTTGCTGTCTGCCTTCTATCTTCATCAGTGCCTaGGTCCACCACCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TAPIWPVVLSPSACCLPSIFISA*VHHLAF
Trigger: AAAAGCAAGGTGGTGGACCAAGGCACTGATGAAGAT...AGAAGGCAGACAGCAAGCAGATGGGCTGAGGACTACAGGCCAGATGGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp TCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACCAGCCTATGGGGATCAAGATTTCCTCCCCTTaGTCACAGCTGACTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SPRKVVQTAAHQHQPMGIKISSP*SQLTSV
Trigger: CACTGAAGTCAGCTGTGACAAAGGGGAGGAAATCTT...GATCCCCATAGGCTGGTGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 90 bp CAGGTTTCCTATCTGCCATCTCTTCAGCACCACTGGAAACCTTCTTaGCTCTCTTACAGCCTGAAGAGCTTGAAGACGCCTCCGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QVSYLPSLQHHWKPS*LSYSLKSLKTPPES
Trigger: GCTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAGGAAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GTAGTAGGCATCCCTATCTTGAAGTGGCACCTTGGTAAAGCGAATTaGAATGATGGAGAGGCCAATGGCCAGCAGATCTGGCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: VVGIPILKWHLGKAN*NDGEANGQQIWLSA
Trigger: TGCCGACAGCCAGATCTGCTGGCCATTGGCCTCTCCATCATTCCAATTCGCTTTACCAAGGTGCCACTTCAAGATAGGGATGCCTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CAGGGATCCGAAGGTATCTCCCAGGAAAGTGGTCCAAACAGCAGCTCACCAGCACTGGTCGTAGGTTTGTaGTGGCTTTCTGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: QGSEGISQESGPNSSSPALVVGL*WLSGLL
Trigger: TAACAGTCCAGAAAGCCACAACAAACCTACGACCAG...TGCTGGTGAGCTGCTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGCTGCTGGTCGTAGGTTaGTTGTGGCTTTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: LKSKCPGSEGEESKRCERLLVVG*LWLSGL
Trigger: CAGTCCAGAAAGCCACAACAAACCTACGACCAGCAG...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 90 bp TTCAGTGGAATGGGCTGCAGAGACAAGACCAGCCGGGTGAGCAGCTaGAGAGCCCGAAGAATCAGAAGAAATATATGGACCAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: FSGMGCRDKTSRVSS*RARRIRRNIWTNSS
Trigger: TGAAGAGTTGGTCCATATATTTCTTCTGATTCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 90 bp ACAGTACACCTCCAGCCACTGGTCTACACCAGCAGGTTTCCTATCTaGCATCTCTTCAGCACCACTGGAAACCTTCTTGCCTCTCTTACA +
Preference number: 5 (lower is better)
Translates to: TVHLQPLVYTSRFPI*HLFSTTGNLLASLT
Trigger: TGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGCTGGTGTAGACCAGTGGCTGGAGGTGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GGTCTACACCAGCAGGTTTCCTATCTGCCATCTCTTCAGCACCACTaGAAACCTTCTTGCCTCTCTTACAGCCTGAAGAGCTTGAAGACG +
Preference number: 5 (lower is better)
Translates to: GLHQQVSYLPSLQHH*KPSCLSYSLKSLKT
Trigger: CGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGCTGGTGTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGTGGCCACTTTCTTTTTaGCTGCACCATTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LKSKCPGSEGEESKRCERWPLSF*LHHLWG
Trigger: ACCCCACAAATGGTGCAGCAAAAAAGAAAGTGGCCA...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp CAACTCCTAAGAAAGAGTCAGGAAGTGCACACGGCACTCAGAACGAATGCCGACTGGCCACTTTCTTTTTaGCTGCACCATTTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: QLLRKSQEVHTALRTNADWPLSF*LHHLWG
Trigger: ACCCCACAAATGGTGCAGCAAAAAAGAAAGTGGCCA...GTCGGCATTCGTTCTGAGTGCCGTGTGCACTTCCTGACTCTTTCTTAGGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp TCCCTGGAGTGCAAGGTATGCACGCAATCCCTAAGGGAAGACAAAGGGAAGACTATCTTCATCAGTGCCTaGGTCCACCACCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SLECKVCTQSLREDKGKTIFISA*VHHLAF
Trigger: AAAAGCAAGGTGGTGGACCAAGGCACTGATGAAGAT...AGTCTTCCCTTTGTCTTCCCTTAGGGATTGCGTGCATACCTTGCACTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CATCTTATAGGGCACTTCTCCAAGCCGCACCACTCTTGCTTGCTTCAGCCATGTCTGGTCGTAGGTTTGTaGTGGCTTTCTGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: HLIGHFSKPHHSCLLQPCLVVGL*WLSGLL
Trigger: TAACAGTCCAGAAAGCCACAACAAACCTACGACCAG...ACATGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS TCA 90 bp TGTTTCAATTTCAATCTCCACCGCCTTCACAGGCATGTCAGACGGTaGGGTGGCAGAATTTTCTCCCATGTCCAGCACAGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: CFNFNLHRLHRHVRR*GGRIFSHVQHRFSK
Trigger: CTTACTGAACCTGTGCTGGACATGGGAGAAAATTCTGCCACCTCACCGTCTGACATGCCTGTGAAGGCGGTGGAGATTGAAATTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 90 bp GAAGAAATATATGGACCAACTCTTCATTATCCCTCGCAGAGTAAATaGCAATCCTCCTTTCCAAGGTGGTCTGCAGGTCGTCCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: EEIYGPTLHYPSQSK*QSSFPRWSAGRPAR
Trigger: GCGAGCAGGACGACCTGCAGACCACCTTGGAAAGGAGGATTGCCATTTACTCTGCGAGGGATAATGAAGAGTTGGTCCATATATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS-3UTR CAA 90 bp CTGAAAAGCAAATGCCCTGGGTCTGAAGGAGAGGAAAGCAAGCGTTGTGAACGGTCCTCCTTCAGAACCTaGAGATTCTTGGATTTAGCA +
Preference number: 5 (lower is better)
Translates to: LKSKCPGSEGEESKRCERSSFRT*RFLDLA
Trigger: TGCTAAATCCAAGAATCTCAAGGTTCTGAAGGAGGA...CCGTTCACAACGCTTGCTTTCCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS-3UTR CAA 90 bp AACAGAGGACTCACCCTCAGGCTGGGTTCCTATGTTTCTCTTCTGTGTTTTCCACCACCACCTTGCTTTTaGGGTGTTTCTTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: NRGLTLRLGSYVSLLCFPPPPCF*GVSLPS
Trigger: AGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGG...TGGAAAACACAGAAGAGAAACATAGGAACCCAGCCTGAGGGTGAGTCCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS TCA 90 bp GTCAGCGTTGACAGTGAAGGTTCCGATGAACCACTTTACCAGGTTTaGAAGGTAGTAGGCATCCCTATCTTGAAGTGGCACCTTGGTAAA +
Preference number: 5 (lower is better)
Translates to: VSVDSEGSDEPLYQV*KVVGIPILKWHLGK
Trigger: TTTACCAAGGTGCCACTTCAAGATAGGGATGCCTACTACCTTTCAAACCTGGTAAAGTGGTTCATCGGAACCTTCACTGTCAACGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp CTCCCTCGCTGCAAGAGGGCTTCCTCCGCTGCCTGCTaGCCGCAGTGCCTGTGCCTCTCTTCCCCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LPRCKRASSAAC*PQCLCLSSPWR
Trigger: CCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGCCCTCTTGCAGCGAGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp CCTCTCCCTCGCTGCAAGAGGGCTTCCTCCGCTGCCTaGTGCCCGCAGTGCCTGTGCCTCTCTTCCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PLPRCKRASSAA*CPQCLCLSSPW
Trigger: CCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGCAGCGGAGGAAGCCCTCTTGCAGCGAGGGAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp GCAGCCACACGCCGCTTCCGGGCATGTGGACGGCCCTaGACTTTCTGCTCGGCCTCCTCTCCCTCGCTGCAA +
Preference number: 6 (lower is better)
Translates to: AATRRFRACGRP*TFCSASSPSLQ
Trigger: TTGCAGCGAGGGAGAGGAGGCCGAGCAGAAAGTCCAGGGCCGTCCACATGCCCGGAAGCGGCGTGTGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CCGCTGCCTGCCCCATCGCTCTCACTCTCCTCTTTGTATGACACCTaGGCAGCCACACGCCGCTTCCGGGCATGTGGACGGCCCTGGACT +
Preference number: 6 (lower is better)
Translates to: PLPAPSLSLSSLYDT*AATRRFRACGRPWT
Trigger: AGTCCAGGGCCGTCCACATGCCCGGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAGCGATGGGGCAGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp GCCTGCTGCCCGCAGTGCCTGTGCCTCTCTTCCCCCTaGCGGTTGCTTTGCCTCTGCCCTCAGACAAGGTTT +
Preference number: 6 (lower is better)
Translates to: ACCPQCLCLSSP*RLLCLCPQTRF
Trigger: AAACCTTGTCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGCAGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp GCCCGCAGTGCCTGTGCCTCTCTTCCCCCTGGCGGTTaGTTTGCCTCTGCCCTCAGACAAGGTTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ARSACASLPPGG*FASALRQGFFF
Trigger: GAAGAAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGAGAGGCACAGGCACTGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp AGGTCTCAGCCCACCACTCAGCATCAACCCGGCACTTaGGGGTTGCGGTCATCCAGGCTGGGTCATACCTCT +
Preference number: 6 (lower is better)
Translates to: RSQPTTQHQPGT*GLRSSRLGHTS
Trigger: AGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCTGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp ATCAGAAGAGAGTCCGCCTCCAGCAGCATGGGGAGCTaGTGCCTCGCTCTTGGCCCCATAGCGGAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: IRRESASSSMGS*CLALGPIAEFQ
Trigger: CTGAAACTCCGCTATGGGGCCAAGAGCGAGGCAGCAGCTCCCCATGCTGCTGGAGGCGGACTCTCTTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS CAA 72 bp AAGGTCTCAGCCCACCACTCAGCATCAACCCGGCACTaGCGGGTTGCGGTCATCCAGGCTGGGTCATACCTC +
Preference number: 6 (lower is better)
Translates to: KVSAHHSASTRH*RVAVIQAGSYL
Trigger: GAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCTGAGACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp TCAAAGTCAGAGCCGCTGCCTGCCCCATCGCTCTCACTCTCCTCTTaGTATGACACCTTGGCAGCCACACGCCGCTTCCGGGCATGTGGA +
Preference number: 6 (lower is better)
Translates to: SKSEPLPAPSLSLSS*YDTLAATRRFRACG
Trigger: TCCACATGCCCGGAAGCGGCGTGTGGCTGCCAAGGTGTCATACAAAGAGGAGAGTGAGAGCGATGGGGCAGGCAGCGGCTCTGACTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp AGCCCACCACTCAGCATCAACCCGGCACTTGCGGGTTaGGGTCATCCAGGCTGGGTCATACCTCTGAGTAAC +
Preference number: 6 (lower is better)
Translates to: SPPLSINPALAG*GHPGWVIPLSN
Trigger: GTTACTCAGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CACAATCCTCATCAGAGGAATGCTGGCCCTCCCCACTaGACGGTTCAAAGTCAGAGCCGCTGCCTGCCCCAT +
Preference number: 6 (lower is better)
Translates to: HNPHQRNAGPPH*TVQSQSRCLPH
Trigger: ATGGGGCAGGCAGCGGCTCTGACTTTGAACCGTCCAGTGGGGAGGGCCAGCATTCCTCTGATGAGGATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp ATCAACCCGGCACTTGCGGGTTGCGGTCATCCAGGCTaGGTCATACCTCTGAGTAACATCTCGGACCCAGCC +
Preference number: 6 (lower is better)
Translates to: INPALAGCGHPG*VIPLSNISDPA
Trigger: GGCTGGGTCCGAGATGTTACTCAGAGGTATGACCCAGCCTGGATGACCGCAACCCGCAAGTGCCGGGTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CAGGCTGGCCCACCACACCATGTACACAGTCCACACACACCCACTTaGCCTGTGGCTCACAGTACACCTCCAGCCACTGGTCTACACCAG +
Preference number: 6 (lower is better)
Translates to: QAGPPHHVHSPHTPT*PVAHSTPPATGLHQ
Trigger: CTGGTGTAGACCAGTGGCTGGAGGTGTACTGTGAGCCACAGGCAAAGTGGGTGTGTGTGGACTGTGTACATGGTGTGGTGGGCCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp GTGCCTTGGTCCACCACCTTGCTTTTTGGGTGTTTCTTTGCCTTCTaGCAGTCAGCTGGTGAGTCCCCGCAACGCTCTCCTCGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: VPWSTTLLFGCFFAF*QSAGESPQRSPRAG
Trigger: CCCGGCACGAGGAGAGCGTTGCGGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206476.2
CDS GCA 72 bp CTCCCCTTTGTCACAGCTGACTTCAGTGGAATGGGCTaGAGAGACAAGACCAGCCGGGTGAGCAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: LPFVTADFSGMG*RDKTSRVSSCR
Trigger: TCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAGCTGTGACAAAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TACAGCCTGAAGAGCTTGAAGACGCCTCCGGAAAGCTaGACGGCTCACACTGGCTTCCGCGTTGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: YSLKSLKTPPES*TAHTGFRVGSW
Trigger: CCAAGACCCAACGCGGAAGCCAGTGTGAGCCGTCAAGCTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp TGCCTCTCTTACAGCCTGAAGAGCTTGAAGACGCCTCCGGAAAGCTaGACGGCTCACACTGGCTTCCGCGTTGGGTCTTGGAAGCACTCT +
Preference number: 6 (lower is better)
Translates to: CLSYSLKSLKTPPES*TAHTGFRVGSWKHS
Trigger: AGAGTGCTTCCAAGACCCAACGCGGAAGCCAGTGTGAGCCGTCAAGCTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CAGCACCACTGGAAACCTTCTTGCCTCTCTTACAGCCTGAAGAGCTaGAAGACGCCTCCGGAAAGCTTGACGGCTCACACTGGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: QHHWKPSCLSYSLKS*KTPPESLTAHTGFR
Trigger: GCGGAAGCCAGTGTGAGCCGTCAAGCTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp AGAGGCCAATGGCCAGCAGATCTGGCTGTCGGCAGATaGTATTTCGATAGAAGCCACTGGCCAGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: RGQWPADLAVGR*YFDRSHWPAGT
Trigger: TGTGCCTGCTGGCCAGTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAGATCTGCTGGCCATTGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CCCTCGCAGAGTAAATGGCAATCCTCCTTTCCAAGGTaGTCTGCAGGTCGTCCTGCTCGCTGGCTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: PSQSKWQSSFPR*SAGRPARWLKG
Trigger: ACCTTTCAGCCAGCGAGCAGGACGACCTGCAGACCACCTTGGAAAGGAGGATTGCCATTTACTCTGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp AGGCAGCCAGGACTCTGGCTGCTTCTGCTTGTGAACTaGTCCCTTCCTCTTCATCAGAAGAGAGTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: RQPGLWLLLLVN*SLPLHQKRVRL
Trigger: GAGGCGGACTCTCTTCTGATGAAGAGGAAGGGACCAGTTCACAAGCAGAAGCAGCCAGAGTCCTGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS CAA 72 bp GCAGTGCCTGTGCCTCTCTTCCCCCTGGCGGTTGCTTaGCCTCTGCCCTCAGACAAGGTTTCTTCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: AVPVPLFPLAVA*PLPSDKVSSSL
Trigger: CAAAGAAGAAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCGCCAGGGGGAAGAGAGGCACAGGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp AAGAGGTGGCGCTTCAGGGCATACAGAGGGTGGTTCTaGTATGTGCTGATGGAGGTGGGCAAAGGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: KRWRFRAYRGWF*YVLMEVGKGWS
Trigger: GGACCAGCCTTTGCCCACCTCCATCAGCACATACAAGAACCACCCTCTGTATGCCCTGAAGCGCCACCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp GTGCCTTGGTCCACCACCTTGCTTTTTGGGTGTTTCTTTGCCTTCTaGCAGTCAGCTGGTGAGTCCCGGAAGTCATCCCCGTCGCTGAGT +
Preference number: 6 (lower is better)
Translates to: VPWSTTLLFGCFFAF*QSAGESRKSSPSLS
Trigger: ACTCAGCGACGGGGATGACTTCCGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 72 bp TTCCAAGGTGGTCTGCAGGTCGTCCTGCTCGCTGGCTaGAAGGTCAGCGTTGACAGTGAAGGTTCCGATGAA +
Preference number: 6 (lower is better)
Translates to: FQGGLQVVLLAG*KVSVDSEGSDE
Trigger: TTCATCGGAACCTTCACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGACGACCTGCAGACCACCTTGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp GGAGTGCAAGGTATGCACGCAATCCCTGGAATAGACTaGTTCTCCACGACAATACCCGAGCACCGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: GVQGMHAIPGID*FSTTIPEHRSC
Trigger: ACAGCTGCGGTGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGGATTGCGTGCATACCTTGCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS GCA 72 bp TCACAGCTTCTCAAACGGAAAGAGGTGGGAAGCCTCTaGCGCCCGCCTCTTCCGAGTCATCTTAGTGTACTC +
Preference number: 6 (lower is better)
Translates to: SQLLKRKEVGSL*RPPLPSHLSVL
Trigger: GAGTACACTAAGATGACTCGGAAGAGGCGGGCGGCAGAGGCTTCCCACCTCTTTCCGTTTGAGAAGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS CCA 72 bp TCTCCACCGCCTTCACAGGCATGTCAGACGGTGAGGTaGCAGAATTTTCTCCCATGTCCAGCACAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: SPPPSQACQTVR*QNFLPCPAQVQ
Trigger: CTGAACCTGTGCTGGACATGGGAGAAAATTCTGCCACCTCACCGTCTGACATGCCTGTGAAGGCGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CTGGCTGTCGGCAGATGCTATTTCGATAGAAGCCACTaGCCAGCAGGCACAGCAGGTGAACCTTGTGCATGT +
Preference number: 6 (lower is better)
Translates to: LAVGRCYFDRSH*PAGTAGEPCAC
Trigger: ACATGCACAAGGTTCACCTGCTGTGCCTGCTGGCCAGTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp ACCATGTACACAGTCCACACACACCCACTTTGCCTGTaGCTCACAGTACACCTCCAGCCACTGGTCTACACC +
Preference number: 6 (lower is better)
Translates to: TMYTVHTHPLCL*LTVHLQPLVYT
Trigger: GGTGTAGACCAGTGGCTGGAGGTGTACTGTGAGCCACAGGCAAAGTGGGTGTGTGTGGACTGTGTACATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CTTCCGAGTCATCTTAGTGTACTCGGACTTCTGTTCTaGATCCTCTCGGTTCTGTGGCCAGGAGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LPSHLSVLGLLF*ILSVLWPGGSQ
Trigger: CTGGCTGCCTCCTGGCCACAGAACCGAGAGGATCCAGAACAGAAGTCCGAGTACACTAAGATGACTCGGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032182.5
CDS CCA 72 bp GGCCACCAGGAAGACAAGGAGGATGCCTCATGCACCTaGAATAGACTGCTTCTCCACGACAATACCCGAGCA +
Preference number: 6 (lower is better)
Translates to: GHQEDKEDASCT*NRLLLHDNTRA
Trigger: TGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTTGTCTTCCTGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS CAA 72 bp TGCAGGTCGTCCTGCTCGCTGGCTGAAAGGTCAGCGTaGACAGTGAAGGTTCCGATGAACCACTTTACCAGG +
Preference number: 6 (lower is better)
Translates to: CRSSCSLAERSA*TVKVPMNHFTR
Trigger: CCTGGTAAAGTGGTTCATCGGAACCTTCACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGACGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 72 bp TTTTGGGTGTTTCTTTGCCTTCTTGCAGTCAGCTGGTaGGTCCCGGAAGTCATCCCCGTCGCTGAGTGCTTC +
Preference number: 6 (lower is better)
Translates to: FWVFLCLLAVSW*VPEVIPVAECF
Trigger: GAAGCACTCAGCGACGGGGATGACTTCCGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 72 bp TTCAATCTCCACCGCCTTCACAGGCATGTCAGACGGTaGGGTGGCAGAATTTTCTCCCATGTCCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: FNLHRLHRHVRR*GGRIFSHVQHR
Trigger: CCTGTGCTGGACATGGGAGAAAATTCTGCCACCTCACCGTCTGACATGCCTGTGAAGGCGGTGGAGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 72 bp TCAGTGGAATGGGCTGCAGAGACAAGACCAGCCGGGTaGGCAGCTGCAGAGCCCGAAGAATCAGAAGAAATA +
Preference number: 6 (lower is better)
Translates to: SVEWAAETRPAG*AAAEPEESEEI
Trigger: TATTTCTTCTGATTCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp ATGGGCTGCAGAGACAAGACCAGCCGGGTGAGCAGCTaGAGAGCCCGAAGAATCAGAAGAAATATATGGACC +
Preference number: 6 (lower is better)
Translates to: MGCRDKTSRVSS*RARRIRRNIWT
Trigger: GGTCCATATATTTCTTCTGATTCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp AAGACAAGGAGGATGCCTCATGCACCTGGAATAGACTaGTTCTCCACGACAATACCCGAGCACCGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: KTRRMPHAPGID*FSTTIPEHRSC
Trigger: ACAGCTGCGGTGCTCGGGTATTGTCGTGGAGAAGCAGTCTATTCCAGGTGCATGAGGCATCCTCCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150279.3
CDS CCA 72 bp CACTTTGCCTGTGGCTCACAGTACACCTCCAGCCACTaGTCTACACCAGCAGGTTTCCTATCTGCCATCTCT +
Preference number: 6 (lower is better)
Translates to: HFACGSQYTSSH*STPAGFLSAIS
Trigger: AGAGATGGCAGATAGGAAACCTGCTGGTGTAGACCAGTGGCTGGAGGTGTACTGTGAGCCACAGGCAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TGCCTTGGTCCACCACCTTGCTTTTTGGGTGTTTCTTaGCCTTCTTGCAGTCAGCTGGTGAGTCCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: CLGPPPCFLGVS*PSCSQLVSPRN
Trigger: GTTGCGGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206476.2
CDS CAA 90 bp AAGGTGGTCTGCAGGTCGTCCTGCTCGCTGGCTGAAAGGTCAGCGTaGACAGTGAAGGTTCCGATGAACCACTTTACCAGGTTTGAAAGG +
Preference number: 6 (lower is better)
Translates to: KVVCRSSCSLAERSA*TVKVPMNHFTRFER
Trigger: CCTTTCAAACCTGGTAAAGTGGTTCATCGGAACCTTCACTGTCAACGCTGACCTTTCAGCCAGCGAGCAGGACGACCTGCAGACCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TGCCTTGGTCCACCACCTTGCTTTTTGGGTGTTTCTTaGCCTTCTTGCAGTCAGCTGGTGAGTCCCGGAAGT +
Preference number: 6 (lower is better)
Translates to: CLGPPPCFLGVS*PSCSQLVSPGS
Trigger: ACTTCCGGGACTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TGGAAACCTTCTTGCCTCTCTTACAGCCTGAAGAGCTaGAAGACGCCTCCGGAAAGCTTGACGGCTCACACT +
Preference number: 6 (lower is better)
Translates to: WKPSCLSYSLKS*KTPPESLTAHT
Trigger: AGTGTGAGCCGTCAAGCTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CTCCAGGACCCTCTACAGATGTCTCCTTGGAAGATTTCCTCCCCTTaGTCACAGCTGACTTCAGTGGAATGGGCTGCAGAGACAAGACCA +
Preference number: 6 (lower is better)
Translates to: LQDPLQMSPWKISSP*SQLTSVEWAAETRP
Trigger: TGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAGCTGTGACAAAGGGGAGGAAATCTTCCAAGGAGACATCTGTAGAGGGTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp GCAGGTTTCCTATCTGCCATCTCTTCAGCACCACTGGAAACCTTCTaGCCTCTCTTACAGCCTGAAGAGCTTGAAGACGCCTCCGGAAAG +
Preference number: 6 (lower is better)
Translates to: AGFLSAISSAPLETF*PLLQPEELEDASGK
Trigger: CTTTCCGGAGGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CTGGCGGTTGCTTTGCCTCTGCCCTCAGACAAGGTTTCTTCTTCTTaGATTCTCCTGCTGGTCGTAGGTTTGTTGTGGCTTTCTGGACTG +
Preference number: 6 (lower is better)
Translates to: LAVALPLPSDKVSSS*ILLLVVGLLWLSGL
Trigger: CAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGAAACCTTGTCTGAGGGCAGAGGCAAAGCAACCGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS GCA 72 bp GAGACTTTCGGGAAAGAGCTCTTCCTTCGGGGTTTCTaGTTCTCATCTTCAAAGTCATCCGCAACGCTCTCC +
Preference number: 6 (lower is better)
Translates to: ETFGKELFLRGF*FSSSKSSATLS
Trigger: GGAGAGCGTTGCGGATGACTTTGAAGATGAGAAGCAGAAACCCCGAAGGAAGAGCTCTTTCCCGAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CAGCAGGTTTCCTATCTGCCATCTCTTCAGCACCACTaGAAACCTTCTTGCCTCTCTTACAGCCTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: QQVSYLPSLQHH*KPSCLSYSLKS
Trigger: GCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAGGAAACCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CACTGTCAATGCCTACAACATAGGTCATGGGTTTGGTaGCATATTTGTAACAGGCCACAGGCTGGCCCACCA +
Preference number: 6 (lower is better)
Translates to: HCQCLQHRSWVW*HICNRPQAGPP
Trigger: TGGTGGGCCAGCCTGTGGCCTGTTACAAATATGCCACCAAACCCATGACCTATGTTGTAGGCATTGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TCATCCCCGTCGCTGAGTGCTTCCTCCTTCAGAACCTaGAGATTCTTGGATTTAGCAGTGGCTTTGGCCACT +
Preference number: 6 (lower is better)
Translates to: SSPSLSASSFRT*RFLDLAVALAT
Trigger: AGTGGCCAAAGCCACTGCTAAATCCAAGAATCTCAAGGTTCTGAAGGAGGAAGCACTCAGCGACGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp CTATCTGCCATCTCTTCAGCACCACTGGAAACCTTCTaGCCTCTCTTACAGCCTGAAGAGCTTGAAGACGCC +
Preference number: 6 (lower is better)
Translates to: LSAISSAPLETF*PLLQPEELEDA
Trigger: GGCGTCTTCAAGCTCTTCAGGCTGTAAGAGAGGCAAGAAGGTTTCCAGTGGTGCTGAAGAGATGGCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp CAGTCATCCTCACTGTCATCTTCATCAGTGCCTTGGTCCACCACCTaGCTTTTTGGGTGTTTCTTTGCCTTCTTGCAGTCAGCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: QSSSLSSSSVPWSTT*LFGCFFAFLQSAGE
Trigger: CTCACCAGCTGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCACTGATGAAGATGACAGTGAGGATGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
ENSMUST00000206476.2
CDS CCA 72 bp AATTGGAATGATGGAGAGGCCAATGGCCAGCAGATCTaGCTGTCGGCAGATGCTATTTCGATAGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: NWNDGEANGQQI*LSADAISIEAT
Trigger: AGTGGCTTCTATCGAAATAGCATCTGCCGACAGCCAGATCTGCTGGCCATTGGCCTCTCCATCATTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CTGAAGAACCTCCAGGACCCTCTACAGATGTCTCCTTaGAAGATTTCCTCCCCTTTGTCACAGCTGACTTCA +
Preference number: 6 (lower is better)
Translates to: LKNLQDPLQMSP*KISSPLSQLTS
Trigger: TGAAGTCAGCTGTGACAAAGGGGAGGAAATCTTCCAAGGAGACATCTGTAGAGGGTCCTGGAGGTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp CATCACTGTCAATGCCTACAACATAGGTCATGGGTTTaGTGGCATATTTGTAACAGGCCACAGGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: HHCQCLQHRSWV*WHICNRPQAGP
Trigger: TGGGCCAGCCTGTGGCCTGTTACAAATATGCCACCAAACCCATGACCTATGTTGTAGGCATTGACAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp TATGGACCAACTCTTCATTATCCCTCGCAGAGTAAATaGCAATCCTCCTTTCCAAGGTGGTCTGCAGGTCGT +
Preference number: 6 (lower is better)
Translates to: YGPTLHYPSQSK*QSSFPRWSAGR
Trigger: ACGACCTGCAGACCACCTTGGAAAGGAGGATTGCCATTTACTCTGCGAGGGATAATGAAGAGTTGGTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp GCTTTGCCTCTGCCCTCAGACAAGGTTTCTTCTTCTTaGATTCTCCTGCTGGTCGTAGGTTTGTTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: ALPLPSDKVSSS*ILLLVVGLLWL
Trigger: AAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGAAACCTTGTCTGAGGGCAGAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS TCA 72 bp GACAGTGAAGGTTCCGATGAACCACTTTACCAGGTTTaGAAGGTAGTAGGCATCCCTATCTTGAAGTGGCAC +
Preference number: 6 (lower is better)
Translates to: DSEGSDEPLYQV*KVVGIPILKWH
Trigger: GTGCCACTTCAAGATAGGGATGCCTACTACCTTTCAAACCTGGTAAAGTGGTTCATCGGAACCTTCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp TATCTTCTCACTTCTTTCCCGTTCTTTCGCCTGCTGTaGTGTTTCAATTTCAATCTCCACCGCCTTCACAGG +
Preference number: 6 (lower is better)
Translates to: YLLTSFPFFRLL*CFNFNLHRLHR
Trigger: CCTGTGAAGGCGGTGGAGATTGAAATTGAAACACCACAGCAGGCGAAAGAACGGGAAAGAAGTGAGAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TCACTGTCATCTTCATCAGTGCCTTGGTCCACCACCTaGCTTTTTGGGTGTTTCTTTGCCTTCTTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: SLSSSSVPWSTT*LFGCFFAFLQS
Trigger: TGACTGCAAGAAGGCAAAGAAACACCCAAAAAGCAAGGTGGTGGACCAAGGCACTGATGAAGATGACAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
ENSMUST00000206476.2
CDS CAA 90 bp GACAAGGTTTCTTCTTCTTTGATTCTCCTGCTGGTCGTAGGTTTGTaGTGGCTTTCTGGACTGTTACTAGAGAGTTCTGAAGAACCTCCA +
Preference number: 6 (lower is better)
Translates to: DKVSSSLILLLVVGL*WLSGLLLESSEEPP
Trigger: TGGAGGTTCTTCAGAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGAAACCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 90 bp TCAGACAAGGTTTCTTCTTCTTTGATTCTCCTGCTGGTCGTAGGTTaGTTGTGGCTTTCTGGACTGTTACTAGAGAGTTCTGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: SDKVSSSLILLLVVG*LWLSGLLLESSEEP
Trigger: AGGTTCTTCAGAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGAAACCTTGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CCA 72 bp TCTTCTTTGATTCTCCTGCTGGTCGTAGGTTTGTTGTaGCTTTCTGGACTGTTACTAGAGAGTTCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SSLILLLVVGLL*LSGLLLESSEE
Trigger: TTCTTCAGAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp TCTTCTTCTTTGATTCTCCTGCTGGTCGTAGGTTTGTaGTGGCTTTCTGGACTGTTACTAGAGAGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: SSSLILLLVVGL*WLSGLLLESSE
Trigger: TTCAGAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3
CDS CAA 72 bp GTTTCTTCTTCTTTGATTCTCCTGCTGGTCGTAGGTTaGTTGTGGCTTTCTGGACTGTTACTAGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: VSSSLILLLVVG*LWLSGLLLESS
Trigger: AGAACTCTCTAGTAACAGTCCAGAAAGCCACAACAAACCTACGACCAGCAGGAGAATCAAAGAAGAAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032182.5
ENSMUST00000150279.3