Pregenerated sensors for XNDC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000099481

Ensembl transcript IDs: ENSMUST00000094130.4, ENSMUST00000106950.8, ENSMUST00000142629.8, ENSMUST00000146450.8

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GGGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTaGCAGCAGGCTGTCCCTGCATCCCCGGGGACTGGGATGAAGAGG	+
Preference number: 1 (lower is better) Translates to: GIRGLSHQQQHPRLV*QQAVPASPGTGMKR Trigger: CCTCTTCATCCCAGTCCCCGGGGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 90 bp	CCTCCTCTTCCTTCTGCCCACAGCCGTCTTCCTGTTTGGTTCTTCTaGTCTGGGCTCTGCACTCTCTGCACGGCTGGGACCTGGTTCTCC	+
Preference number: 1 (lower is better) Translates to: PPLPSAHSRLPVWFF*SGLCTLCTAGTWFS Trigger: GGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCTGTGGGCAGAAGGAAGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 90 bp	CCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTaGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACGTCTCC	+
Preference number: 1 (lower is better) Translates to: PSLHQDQLLSPCLVP*GQGERVLVPHDDVS Trigger: GGAGACGTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 90 bp	TGGTTCTTCTGCTCTGGGCTCTGCACTCTCTGCACGGCTGGGACCTaGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACTGGCTGGAGG	+
Preference number: 1 (lower is better) Translates to: WFFCSGLCTLCTAGT*FSVAVVWAYHTGWR Trigger: CCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 90 bp	TGTTCTTCTACCAGGCCCAGCCCTTTGCTCTTTTCTTCTAGGCCCTaGATCAGGGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAG	+
Preference number: 1 (lower is better) Translates to: CSSTRPSPLLFSSRP*IRDPRALPPAAASQ Trigger: CTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCCCTGATCCAGGGCCTAGAAGAAAAGAGCAAAGGGCTGGGCCTGGTAGAAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 90 bp	AGCCGTCTTCCTGTTTGGTTCTTCTGCTCTGGGCTCTGCACTCTCTaGACGGCTGGGACCTGGTTCTCCGTGGCTGTTGTTTGGGCTTAC	+
Preference number: 1 (lower is better) Translates to: SRLPVWFFCSGLCTL*TAGTWFSVAVVWAY Trigger: GTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 90 bp	CTGGGTCCACAGTGTTCTCAGGCAGGCGGAGTCCTGAGTAATAGCTaGAGGGAGGGGACCCAACCCTTCTTAGCCACCAGAGATCCATTC	+
Preference number: 1 (lower is better) Translates to: LGPQCSQAGGVLSNS*REGTQPFLATRDPF Trigger: GAATGGATCTCTGGTGGCTAAGAAGGGTTGGGTCCCCTCCCTCCAGCTATTACTCAGGACTCCGCCTGCCTGAGAACACTGTGGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 90 bp	TCCTGTTTGGTTCTTCTGCTCTGGGCTCTGCACTCTCTGCACGGCTaGGACCTGGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACTGG	+
Preference number: 1 (lower is better) Translates to: SCLVLLLWALHSLHG*DLVLRGCCLGLPHW Trigger: CCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR GCA 90 bp	CTGTGCCTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTaGCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTAC	+
Preference number: 1 (lower is better) Translates to: LCLAFSFISTQSPTL*PPFIRTSCSLPASY Trigger: GTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 90 bp	ACAAGTTGCAGCATGCTGGGGAAGAGTCTCAATACTGAAGAAACCTaGACAAATAGGACACTGTCCAGCAGCCTGCACACCACCGTCATC	+
Preference number: 1 (lower is better) Translates to: TSCSMLGKSLNTEET*TNRTLSSSLHTTVI Trigger: GATGACGGTGGTGTGCAGGCTGCTGGACAGTGTCCTATTTGTGCAGGTTTCTTCAGTATTGAGACTCTTCCCCAGCATGCTGCAACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTAGGCAGGCGGAGTCCTaGGTAATAGCTGGAGGGAGG	+
Preference number: 2 (lower is better) Translates to: PRALPPAAASQTCLAAGCRQAES*VIAGGR Trigger: CCTCCCTCCAGCTATTACTCAGGACTCCGCCTGCCT...ACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTGTCCTGAGTAATAGCTaGAGGGAGGGGACCCAACCC	+
Preference number: 2 (lower is better) Translates to: PRALPPAAASQTCLAAGCVLSNS*REGTQP Trigger: GGGTTGGGTCCCCTCCCTCCAGCTATTACTCAGGAC...ACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	TCAGGGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGGGCTGAATGCTTaGACTCCAGCTCTGCCTCTC	+
Preference number: 2 (lower is better) Translates to: SGIRGLSHQQQHPRLVWQQGLNA*TPALPL Trigger: GAGAGGCAGAGCTGGAGTTCAAGCATTCAGCCCCTG...CTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	GGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGTTCATCAGGACCAGCTaGTCTCTCCCTGCCTCGTAC	+
Preference number: 2 (lower is better) Translates to: GSEGSPTSSSIPDLSGSRFIRTS*SLPASY Trigger: GTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAA...CCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	AGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCCACTTCTGCTCTGGGCTCTaGACTCTCTGCACGGCTGGG	+
Preference number: 2 (lower is better) Translates to: RAQCQFPEEVIRVGGRGHFCSGL*TLCTAG Trigger: CCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAA...GTGGCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	TCAGGGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGTCCTCCTCTTCCTTCTaGCCACAGCCGTCTTCCTGT	+
Preference number: 2 (lower is better) Translates to: SGIRGLSHQQQHPRLVWQSSSSF*PQPSSC Trigger: ACAGGAAGACGGCTGTGGGCAGAAGGAAGAGGAGGA...CTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	AGCAGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCCTGCACCCACCTCTGTaGGCAGGGGCTGAATGCTTG	+
Preference number: 2 (lower is better) Translates to: SRAQCQFPEEVIRVGGRGLHPPL*AGAECL Trigger: CAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAG...GCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTGCCATTATTTCCCCCTaGCTGAGCCTCAGTTTTTCA	+
Preference number: 2 (lower is better) Translates to: APPCALPSSGPAALSLPRAIISP*LSLSFS Trigger: TGAAAAACTGAGGCTCAGTCAGGGGGAAATAATGGC...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACCAGCTGCTCTCTCCCTaGCTCGTACCTTGGGGACAA	+
Preference number: 2 (lower is better) Translates to: PCLVPWGQGERVLVPHDDQLLSP*LVPWGQ Trigger: TTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTG...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	AGCAGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCCAGCTGCTCTCTCCCTaGCTCGTACCTTGGGGACAA	+
Preference number: 2 (lower is better) Translates to: SRAQCQFPEEVIRVGGRGQLLSP*LVPWGQ Trigger: TTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTG...GCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CTCTTTTCTTCTAGGCCCTGGATCAGGGATCCGAGGGCTCTCCCACCAGCAGCACATCCCAGACTTGTCTaGCAGCAGGCTGTCCCTGCA	+
Preference number: 2 (lower is better) Translates to: LFSSRPWIRDPRALPPAAHPRLV*QQAVPA Trigger: TGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATG...TGCTGCTGGTGGGAGAGCCCTCGGATCCCTGATCCAGGGCCTAGAAGAAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CTCTTTTCTTCTAGGCCCTGGATCAGGGATCCGAGGGCTCTCCCACCAGCAGCACGTCACTGCTCAGGCTaGCAAAACTTCCCCACACAC	+
Preference number: 2 (lower is better) Translates to: LFSSRPWIRDPRALPPAARHCSG*QNFPTH Trigger: GTGTGTGGGGAAGTTTTGCCAGCCTGAGCAGTGACG...TGCTGCTGGTGGGAGAGCCCTCGGATCCCTGATCCAGGGCCTAGAAGAAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTCCCTGCATCCCCTCTTTAAAGCAGAATTaGACTACCACAGCTCCAGGG	+
Preference number: 2 (lower is better) Translates to: PPAAASQTCLAAGCPCIPSLKQN*TTTAPG Trigger: CCCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGA...GGGGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	TGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACGTCGAATGGGGAGCAAGCTaGGTCCACAGTGTTCTCAGG	+
Preference number: 2 (lower is better) Translates to: CLVPWGQGERVLVPHDDVEWGAS*VHSVLR Trigger: CCTGAGAACACTGTGGACCCAGCTTGCTCCCCATTC...GACGTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	AGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCCACAGCCGTCTTCCTGTTTaGTTCTTCTGCTCTGGGCTC	+
Preference number: 2 (lower is better) Translates to: RAQCQFPEEVIRVGGRGHSRLPV*FFCSGL Trigger: GAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCT...GTGGCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTCCCTGCATCCCCGGGTTTTCATGTTACTaGAGATCCATTTCACACCCA	+
Preference number: 2 (lower is better) Translates to: PPAAASQTCLAAGCPCIPGFSCY*RSISHP Trigger: TGGGTGTGAAATGGATCTTCAGTAACATGAAAACCC...GGGGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	GGAAAGCAGGGGTCTCTTACCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTGTCCTGTCCTCCTATTTaGCTGAGAACTCGAGTTGGA	+
Preference number: 2 (lower is better) Translates to: GKQGSLTERGSMAAPTSVSCPPI*LRTRVG Trigger: TCCAACTCGAGTTCTCAGCCAAATAGGAGGACAGGA...CACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGGTAAGAGACCCCTGCTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	TTCCCTTCCACCACCCGCTCTCAATCTGTCTTCTACTTTGGGGAGCATCTCTACTCACAGATAGGGCACTaGACCCAGGAAGGTGGCGGC	+
Preference number: 2 (lower is better) Translates to: FPSTTRSQSVFYFGEHLYSQIGH*TQEGGG Trigger: GCCGCCACCTTCCTGGGTCCAGTGCCCTATCTGTGA...GTAGAGATGCTCCCCAAAGTAGAAGACAGATTGAGAGCGGGTGGTGGAAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGCAGGCGGAGTCCTaGGTAATAGCTGGAGGGAGG	+
Preference number: 2 (lower is better) Translates to: LAFSFISTQSPTLCPPFIRQAES*VIAGGR Trigger: CCTCCCTCCAGCTATTACTCAGGACTCCGCCTGCCT...GATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	AGCTGGGCTTTCCCTAAACCCTTTGTCTATGCAGAGGGCTCTAGCAGGACCTTACAGGGGCTGAATGCTTaGACTCCAGCTCTGCCTCTC	+
Preference number: 2 (lower is better) Translates to: SWAFPKPFVYAEGSSRTLQGLNA*TPALPL Trigger: GAGAGGCAGAGCTGGAGTTCAAGCATTCAGCCCCTG...TAAGGTCCTGCTAGAGCCCTCTGCATAGACAAAGGGTTTAGGGAAAGCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	AGCAGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCGGATCCCAGCTTGCTTaGTCTTCTAGCTGTTTCTCT	+
Preference number: 2 (lower is better) Translates to: SRAQCQFPEEVIRVGGRGGSQLA*SSSCFS Trigger: AGAGAAACAGCTAGAAGATCAAGCAAGCTGGGATCC...GCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	TTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCGGACAACGATCTCCTTaGCTCCTGCACTTTCCTCCT	+
Preference number: 2 (lower is better) Translates to: FISTQSPTLCPPFIRTSCGQRSP*LLHFPP Trigger: AGGAGGAAAGTGCAGGAGCCAAGGAGATCGTTGTCC...GCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	AGCTGGGCTTTCCCTAAACCCTTTGTCTATGCAGAGGGCTCTAGCAGGACCTTAGCTCTGCCTCTCCCTTaGCTGTGCCTAGCATTCTCT	+
Preference number: 2 (lower is better) Translates to: SWAFPKPFVYAEGSSRTLALPLP*LCLAFS Trigger: AGAGAATGCTAGGCACAGTCAAGGGAGAGGCAGAGC...TAAGGTCCTGCTAGAGCCCTCTGCATAGACAAAGGGTTTAGGGAAAGCCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCGTCCTGAGTAATAGCTaGAGGGAGGGGACCCAACCC	+
Preference number: 2 (lower is better) Translates to: LAFSFISTQSPTLCPPFIVLSNS*REGTQP Trigger: GGGTTGGGTCCCCTCCCTCCAGCTATTACTCAGGAC...GATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	TTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTTTTCATGTTACTaGAGATCCATTTCACACCCA	+
Preference number: 2 (lower is better) Translates to: FIRTSCSLPASYLGDKGNGFSCY*RSISHP Trigger: TGGGTGTGAAATGGATCTTCAGTAACATGAAAACCC...GTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	AGCAGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCGGGTTTTCATGTTACTaGAGATCCATTTCACACCCA	+
Preference number: 2 (lower is better) Translates to: SRAQCQFPEEVIRVGGRGGFSCY*RSISHP Trigger: TGGGTGTGAAATGGATCTTCAGTAACATGAAAACCC...GCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	GAAAGCAGGGGTCTCTTACCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTGGAGTATCCTAAGGCCTTaGAGAGATCATCAATTCTAC	+
Preference number: 2 (lower is better) Translates to: ESRGLLPKGGPWLHPPLWSILRP*RDHQFY Trigger: GTAGAATTGATGATCTCTCCAAGGCCTTAGGATACT...CCACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGGTAAGAGACCCCTGCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTCCCTGCATCCCCTTTCATTCAGGAAAATaGGCATTAGGTAACACATTC	+
Preference number: 2 (lower is better) Translates to: PPAAASQTCLAAGCPCIPFHSGK*ALGNTF Trigger: GAATGTGTTACCTAATGCCCATTTTCCTGAATGAAA...GGGGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CAA 90 bp	CACCACCGTCATCACTTTTGGTCTGAGGTCGGTGCTGTCTTTGTCTaGTCCTTCCTGTCCTCCTATTTGGCTGAGAACTCGAGTTGGACA	+
Preference number: 2 (lower is better) Translates to: HHRHHFWSEVGAVFV*SFLSSYLAENSSWT Trigger: TGTCCAACTCGAGTTCTCAGCCAAATAGGAGGACAGGAAGGACAAGACAAAGACAGCACCGACCTCAGACCAAAAGTGATGACGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CAA 90 bp	CTGCACACCACCGTCATCACTTTTGGTCTGAGGTCGGTGCTGTCTTaGTCTTGTCCTTCCTGTCCTCCTATTTGGCTGAGAACTCGAGTT	+
Preference number: 2 (lower is better) Translates to: LHTTVITFGLRSVLS*SCPSCPPIWLRTRV Trigger: AACTCGAGTTCTCAGCCAAATAGGAGGACAGGAAGGACAAGACAAAGACAGCACCGACCTCAGACCAAAAGTGATGACGGTGGTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACAGTTGGAATGAGATTTaGTCAAACCCTTACAAGCCA	+
Preference number: 2 (lower is better) Translates to: PCLVPWGQGERVLVPHDDSWNEI*SNPYKP Trigger: TGGCTTGTAAGGGTTTGAGCAAATCTCATTCCAACT...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	CTTAAGATGTTCCCTTCCACCACCCGCTCTCAATCTGTCTTCTACTTTGGGGAGCCTGTTTGGTTCTTCTaGTCTGGGCTCTGCACTCTC	+
Preference number: 2 (lower is better) Translates to: LKMFPSTTRSQSVFYFGEPVWFF*SGLCTL Trigger: GAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGG...CTCCCCAAAGTAGAAGACAGATTGAGAGCGGGTGGTGGAAGGGAACATCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	TTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACAATACTGAAGAAACCTaGACAAATAGGACACTGTCC	+
Preference number: 2 (lower is better) Translates to: FIRTSCSLPASYLGDKGNNTEET*TNRTLS Trigger: GGACAGTGTCCTATTTGTGCAGGTTTCTTCAGTATT...GTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTGTCCTGAGTAATAGCTaGAGGGAGGGGACCCAACCC	+
Preference number: 2 (lower is better) Translates to: QLQGRHCGPTISNSWNEIVLSNS*REGTQP Trigger: GGGTTGGGTCCCCTCCCTCCAGCTATTACTCAGGAC...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CTTAAGAACCATGTGAGTAGGAAGAGGGTTTTCATGTTACTGAAGATCCATTTCTGGCGGCGAGCTCTCTaGGGAGGAGACCCACAGCAC	+
Preference number: 2 (lower is better) Translates to: LKNHVSRKRVFMLLKIHFWRRAL*GGDPQH Trigger: GTGCTGTGGGTCTCCTCCCCAGAGAGCTCGCCGCCA...GAAATGGATCTTCAGTAACATGAAAACCCTCTTCCTACTCACATGGTTCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CTCTTTTCTTCTAGGCCCTGGATCAGGGATCCGAGGGCTCTCCCACCAGCAGCATTTCATTCAGGAAAATaGGCATTAGGTAACACATTC	+
Preference number: 2 (lower is better) Translates to: LFSSRPWIRDPRALPPAAFHSGK*ALGNTF Trigger: GAATGTGTTACCTAATGCCCATTTTCCTGAATGAAA...TGCTGCTGGTGGGAGAGCCCTCGGATCCCTGATCCAGGGCCTAGAAGAAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATAAGGCAGGCGGAGTCCTaGGTAATAGCTGGAGGGAGG	+
Preference number: 2 (lower is better) Translates to: LRPWRDHQFYQRSSKGKIRQAES*VIAGGR Trigger: CCTCCCTCCAGCTATTACTCAGGACTCCGCCTGCCT...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATTGAACTACCACTTGGTTCTTCTGCTCTaGGCTCTGCACTCTCTGCAC	+
Preference number: 2 (lower is better) Translates to: PGEKGKRAQFFKAELNYHLVLLL*ALHSLH Trigger: GTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAA...GTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CAATCTGTCTTCTACTTTGGGGAGCATCTCTACTCCTTAGTGTTTGGTCCTGTTGGAGGGTCTTCAAGCTaGGCTTTCCCTAAACCCTTT	+
Preference number: 2 (lower is better) Translates to: QSVFYFGEHLYSLVFGPVGGSSS*AFPKPF Trigger: AAAGGGTTTAGGGAAAGCCCAGCTTGAAGACCCTCC...AACAGGACCAAACACTAAGGAGTAGAGATGCTCCCCAAAGTAGAAGACAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTGATCTCCTTGGCTCCTaGACTTTCCTCCTCTTCCTT	+
Preference number: 2 (lower is better) Translates to: IIYSLERNLSGSLKNHVSDLLGS*TFLLFL Trigger: AAGGAAGAGGAGGAAAGTGCAGGAGCCAAGGAGATC...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CAATTCTACCAAAGAAGTTCTAAGGGGAAAATATCCTTTGAGAATTGGGTACCAGAATGGGGAGCAAGCTaGGTCCACAGTGTTCTCAGG	+
Preference number: 2 (lower is better) Translates to: QFYQRSSKGKISFENWVPEWGAS*VHSVLR Trigger: CCTGAGAACACTGTGGACCCAGCTTGCTCCCCATTC...TGGTACCCAATTCTCAAAGGATATTTTCCCCTTAGAACTTCTTTGGTAGAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTAGTTGGAATGAGATTTaGTCAAACCCTTACAAGCCA	+
Preference number: 2 (lower is better) Translates to: QLQGRHCGPTISNSWNEISWNEI*SNPYKP Trigger: TGGCTTGTAAGGGTTTGAGCAAATCTCATTCCAACT...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR GCA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAAGTTGGAATGAGATTTaGTCAAACCCTTACAAGCCA	+
Preference number: 2 (lower is better) Translates to: HMMTSPGEKGKRAQFFKASWNEI*SNPYKP Trigger: TGGCTTGTAAGGGTTTGAGCAAATCTCATTCCAACT...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTAGTATCCTAAGGCCTTaGAGAGATCATCAATTCTAC	+
Preference number: 2 (lower is better) Translates to: QLQGRHCGPTISNSWNEISILRP*RDHQFY Trigger: GTAGAATTGATGATCTCTCCAAGGCCTTAGGATACT...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR TCA 90 bp	CACACTCAAGACTCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCGCCATTATTTCCCCCTaGCTGAGCCTCAGTTTTTCA	+
Preference number: 2 (lower is better) Translates to: HTQDSFTHLPKQHNFIIPAIISP*LSLSFS Trigger: TGAAAAACTGAGGCTCAGTCAGGGGGAAATAATGGC...GGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGAGTCTTGAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	CCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATTGAACTACCACAGTATCCTAAGGCCTTaGAGAGATCATCAATTCTAC	+
Preference number: 2 (lower is better) Translates to: PGEKGKRAQFFKAELNYHSILRP*RDHQFY Trigger: GTAGAATTGATGATCTCTCCAAGGCCTTAGGATACT...GTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CCA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTTTTCATTCAGGAAAATaGGCATTAGGTAACACATTC	+
Preference number: 2 (lower is better) Translates to: IIYSLERNLSGSLKNHVSFHSGK*ALGNTF Trigger: GAATGTGTTACCTAATGCCCATTTTCCTGAATGAAA...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	GGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTaGCAGCAGGCTGTCCCTGCATCCCCGGGGACTGGG	+
Preference number: 3 (lower is better) Translates to: GLSHQQQHPRLV*QQAVPASPGTG Trigger: CCCAGTCCCCGGGGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	AGGGCACTGGACCCAGGAAGGTGGCGGCGAGCTCTCTaGGGAGGAGACCCACAGCACGGACTCCGAGGAAGA	+
Preference number: 3 (lower is better) Translates to: RALDPGRWRRAL*GGDPQHGLRGR Trigger: TCTTCCTCGGAGTCCGTGCTGTGGGTCTCCTCCCCAGAGAGCTCGCCGCCACCTTCCTGGGTCCAGTGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTGGTTCTCCGTGGCTGTaGTTTGGGCTTACCACACTG	+
Preference number: 3 (lower is better) Translates to: APPCALPSSGPAALSLPRGSPWL*FGLTTL Trigger: CAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACC...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR TCA 72 bp	GGGTCCATGGCTGCACCCACCTCTGTGGGCAGGGGCTaGATGCTTGAACTCCAGCTCTGCCTCTCCCTTGAC	+
Preference number: 3 (lower is better) Translates to: GSMAAPTSVGRG*MLELQLCLSLD Trigger: GTCAAGGGAGAGGCAGAGCTGGAGTTCAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAGCCATGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 72 bp	CCATGGCTGCACCCACCTCTGTGGGCAGGGGCTGAATaGTTGAACTCCAGCTCTGCCTCTCCCTTGACTGTG	+
Preference number: 3 (lower is better) Translates to: PWLHPPLWAGAE*LNSSSASPLTV Trigger: CACAGTCAAGGGAGAGGCAGAGCTGGAGTTCAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 72 bp	CCTTCTGCCCACAGCCGTCTTCCTGTTTGGTTCTTCTaGTCTGGGCTCTGCACTCTCTGCACGGCTGGGACC	+
Preference number: 3 (lower is better) Translates to: PSAHSRLPVWFF*SGLCTLCTAGT Trigger: GGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCTGTGGGCAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 72 bp	TTACCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTaGGCAGGGGCTGAATGCTTGAACTCCAGCTCTGCC	+
Preference number: 3 (lower is better) Translates to: LPKGGPWLHPPL*AGAECLNSSSA Trigger: GGCAGAGCTGGAGTTCAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 72 bp	AGCCGTCTTCCTGTTTGGTTCTTCTGCTCTGGGCTCTaGACTCTCTGCACGGCTGGGACCTGGTTCTCCGTG	+
Preference number: 3 (lower is better) Translates to: SRLPVWFFCSGL*TLCTAGTWFSV Trigger: CACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 72 bp	TGCTCTGGGCTCTGCACTCTCTGCACGGCTGGGACCTaGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACT	+
Preference number: 3 (lower is better) Translates to: CSGLCTLCTAGT*FSVAVVWAYHT Trigger: AGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACCTCCGTGGCTGTTGTTaGGGCTTACCACACTGGCTG	+
Preference number: 3 (lower is better) Translates to: PCLVPWGQGERVLVPHDDLRGCC*GLPHWL Trigger: CAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAG...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CCA 72 bp	CAGTGTTCTCAGGCAGGCGGAGTCCTGAGTAATAGCTaGAGGGAGGGGACCCAACCCTTCTTAGCCACCAGA	+
Preference number: 3 (lower is better) Translates to: QCSQAGGVLSNS*REGTQPFLATR Trigger: TCTGGTGGCTAAGAAGGGTTGGGTCCCCTCCCTCCAGCTATTACTCAGGACTCCGCCTGCCTGAGAACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	CATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTaGGGACAAGGGGAACGGGTGTTAGTGCCACATGAT	+
Preference number: 3 (lower is better) Translates to: HQDQLLSPCLVP*GQGERVLVPHD Trigger: ATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	GTTCTTCTGCTCTGGGCTCTGCACTCTCTGCACGGCTaGGACCTGGTTCTCCGTGGCTGTTGTTTGGGCTTA	+
Preference number: 3 (lower is better) Translates to: VLLLWALHSLHG*DLVLRGCCLGL Trigger: TAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	TCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGCATAGTGACAAAGCCTaGACAACAGGAATGGGGAGC	+
Preference number: 3 (lower is better) Translates to: SSGPAALSLPRTLGTRGTHSDKA*TTGMGS Trigger: GCTCCCCATTCCTGTTGTCAAGGCTTTGTCACTATG...CGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACCATAGTGACAAAGCCTaGACAACAGGAATGGGGAGC	+
Preference number: 3 (lower is better) Translates to: PCLVPWGQGERVLVPHDDHSDKA*TTGMGS Trigger: GCTCCCCATTCCTGTTGTCAAGGCTTTGTCACTATG...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCAATCTGTCTTCTACTTaGGGGAGCATCTCTACTCCT	+
Preference number: 3 (lower is better) Translates to: LPKAPPCALPSSGPAALSNLSST*GSISTP Trigger: AGGAGTAGAGATGCTCCCCAAAGTAGAAGACAGATT...GGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	TTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCCAGCCGTCTTCCTGTTaGGTTCTTCTGCTCTGGGCT	+
Preference number: 3 (lower is better) Translates to: FISTQSPTLCPPFIRTSCQPSSC*VLLLWA Trigger: AGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCTG...GCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR GCA 72 bp	GCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTaGCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCT	+
Preference number: 3 (lower is better) Translates to: AFSFISTQSPTL*PPFIRTSCSLP Trigger: AGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	CAAGTTCAGACACGCACACATGGAGGGTCTTCAAGCTaGGCTTTCCCTAAACCCTTTGTCTATGCAGAGGGC	+
Preference number: 3 (lower is better) Translates to: QVQTRTHGGSSS*AFPKPFVYAEG Trigger: GCCCTCTGCATAGACAAAGGGTTTAGGGAAAGCCCAGCTTGAAGACCCTCCATGTGTGCGTGTCTGAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	AGCAGGGCCCAGTGTCAGTTCCCTGAAGAGGTGATTAGAGTAGGTGGTCGGGGCTTCTTTAAAGCAGAATaGAACTACCACAGCTCCAGG	+
Preference number: 3 (lower is better) Translates to: SRAQCQFPEEVIRVGGRGFFKAE*NYHSSR Trigger: CCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAA...GCCCCGACCACCTACTCTAATCACCTCTTCAGGGAACTGACACTGGGCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCGTTCTTCTATTTCTCTaGCTGAGAACTGTAATTCAC	+
Preference number: 3 (lower is better) Translates to: LPKAPPCALPSSGPAALSVLLFL*LRTVIH Trigger: GTGAATTACAGTTCTCAGCAAGAGAAATAGAAGAAC...GGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTACCAGGCCCAGCCCTTaGCTCTTTTCTTCTAGGCCC	+
Preference number: 3 (lower is better) Translates to: QLQGRHCGPTISNSWNEITRPSP*LFSSRP Trigger: GGGCCTAGAAGAAAAGAGCAAAGGGCTGGGCCTGGT...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	CCCTTCCACCACCCGCTCTCAATCTGTCTTCTACTTTaGGGAGCATCTCTACTCCTTAGTGTTTGGTCCTGT	+
Preference number: 3 (lower is better) Translates to: PFHHPLSICLLL*GASLLLSVWSC Trigger: ACAGGACCAAACACTAAGGAGTAGAGATGCTCCCCAAAGTAGAAGACAGATTGAGAGCGGGTGGTGGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR TCA 72 bp	TGTCTTTGTCTTGTCCTTCCTGTCCTCCTATTTGGCTaGGAACTCGAGTTGGACAACGATCTCCTTGGCTCC	+
Preference number: 3 (lower is better) Translates to: CLCLVLPVLLFG*ELELDNDLLGS Trigger: GGAGCCAAGGAGATCGTTGTCCAACTCGAGTTCTCAGCCAAATAGGAGGACAGGAAGGACAAGACAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCTTCTTTAAAGCAGAATaGAACTACCACAGCTCCAGG	+
Preference number: 3 (lower is better) Translates to: LAFSFISTQSPTLCPPFIFFKAE*NYHSSR Trigger: CCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAA...GATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR TCA 72 bp	AAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATTaGACTACCACAGCTCCAGGGGAGACACTGTGGTCC	+
Preference number: 3 (lower is better) Translates to: KKGSVHNSLKQN*TTTAPGETLWS Trigger: GGACCACAGTGTCTCCCCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTCATAGTGACAAAGCCTaGACAACAGGAATGGGGAGC	+
Preference number: 3 (lower is better) Translates to: IIYSLERNLSGSLKNHVSHSDKA*TTGMGS Trigger: GCTCCCCATTCCTGTTGTCAAGGCTTTGTCACTATG...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR CCA 72 bp	CAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTaGAATGAGATTTGCTCAAACCCTTACAAGCCATGC	+
Preference number: 3 (lower is better) Translates to: QGRHCGPTISNS*NEICSNPYKPC Trigger: GCATGGCTTGTAAGGGTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTAGGGGAAAATATCCTTaGAGAATTGGGTACCATAGT	+
Preference number: 3 (lower is better) Translates to: QLQGRHCGPTISNSWNEIRGKYP*RIGYHS Trigger: ACTATGGTACCCAATTCTCAAAGGATATTTTCCCCT...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	CCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATTGAACTACCACAGGGGAAAATATCCTTaGAGAATTGGGTACCATAGT	+
Preference number: 3 (lower is better) Translates to: PGEKGKRAQFFKAELNYHRGKYP*RIGYHS Trigger: ACTATGGTACCCAATTCTCAAAGGATATTTTCCCCT...GTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR GCA 72 bp	TGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTTaGTCAAACCCTTACAAGCCATGCCCAGAATCATCT	+
Preference number: 3 (lower is better) Translates to: CGPTISNSWNEI*SNPYKPCPESS Trigger: AGATGATTCTGGGCATGGCTTGTAAGGGTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
3UTR-3UTR CAA 90 bp	TTCATGTTACTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATTCTTTAAAGCAGAATaGAACTACCACAGCTCCAGG	+
Preference number: 3 (lower is better) Translates to: FMLLKIHFTPMRSKVSESFFKAE*NYHSSR Trigger: CCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAA...TGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAGTAACATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR TCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGATGTCCTGAGGGCAGCTaGGCCAGGGTCCCCTGTGAC	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGCPEGS*ARVPCD Trigger: GTCACAGGGGACCCTGGCTCAGCTGCCCTCAGGACA...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	GGAAAGCAGGGGTCTCTTACCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTGCAGCAGAAAGCACCATaGGGGCTGCCCGCCCCAGAG	+
Preference number: 4 (lower is better) Translates to: GKQGSLTERGSMAAPTSVQQKAP*GLPAPE Trigger: CTCTGGGGCGGGCAGCCCGCATGGTGCTTTCTGCTG...CACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGGTAAGAGACCCCTGCTTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR GCA 90 bp	CCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTGGGCAGGGGCTGAATGCTTGTTCTGCTCTGGGCTCTaGACTCTCTGCACGGCTGGG	+
Preference number: 4 (lower is better) Translates to: PKGGPWLHPPLWAGAECLFCSGL*TLCTAG Trigger: CCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAA...CAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTTTGGGCTTACCACACTaGCTGGAGGGGCCTTACGGG	+
Preference number: 4 (lower is better) Translates to: PRALPPAAASQTCLAAGCLGLPH*LEGPYG Trigger: CCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAA...ACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGACTGGACCCAGGAAGGTaGCGGCGAGCTCTCTGGGGA	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGLDPGR*RRALWG Trigger: TCCCCAGAGAGCTCGCCGCCACCTTCCTGGGTCCAG...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACCAGCAGAAAGCACCATaGGGGCTGCCCGCCCCAGAG	+
Preference number: 4 (lower is better) Translates to: PCLVPWGQGERVLVPHDDQQKAP*GLPAPE Trigger: CTCTGGGGCGGGCAGCCCGCATGGTGCTTTCTGCTG...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCTCACAGATAGGGCACTaGACCCAGGAAGGTGGCGGC	+
Preference number: 4 (lower is better) Translates to: LPKAPPCALPSSGPAALSSQIGH*TQEGGG Trigger: GCCGCCACCTTCCTGGGTCCAGTGCCCTATCTGTGA...GGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTAGGACTGATGACGTGTaGAAGGTTGGGAGCAGGTCA	+
Preference number: 4 (lower is better) Translates to: APPCALPSSGPAALSLPRRTDDV*KVGSRS Trigger: TGACCTGCTCCCAACCTTTCACACGTCATCAGTCCT...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	TCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGTTCTGCTCTGGGCTCTaGACTCTCTGCACGGCTGGG	+
Preference number: 4 (lower is better) Translates to: SSGPAALSLPRTLGTRGTFCSGL*TLCTAG Trigger: CCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGCAGAA...CGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAAAACATCCGGACCCCTaGGCGGTTCTTCCCCGACTT	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGKHPDP*AVLPRL Trigger: AAGTCGGGGAAGAACCGCTCAGGGGTCCGGATGTTT...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	AGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGGATCTCCTTGGCTCCTaGACTTTCCTCCTCTTCCTT	+
Preference number: 4 (lower is better) Translates to: SPTLCPPFIRTSCSLPASDLLGS*TFLLFL Trigger: AAGGAAGAGGAGGAAAGTGCAGGAGCCAAGGAGATC...CGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	ATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTCCCCTGTGACTGTCTaGGTTCAGCAAGTTCTCCAC	+
Preference number: 4 (lower is better) Translates to: IRTSCSLPASYLGDKGNGSPVTV*VQQVLH Trigger: GTGGAGAACTTGCTGAACCCAGACAGTCACAGGGGA...CCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	ATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGGCAGGTACATACGTCTaGGGATCGGGGAAGAATGTC	+
Preference number: 4 (lower is better) Translates to: IRTSCSLPASYLGDKGNGAGTYV*GSGKNV Trigger: GACATTCTTCCCCGATCCCCAGACGTATGTACCTGC...CCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR GCA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACTCCTCCTCTTCCTTCTaGCCACAGCCGTCTTCCTGT	+
Preference number: 4 (lower is better) Translates to: PCLVPWGQGERVLVPHDDSSSSF*PQPSSC Trigger: ACAGGAAGACGGCTGTGGGCAGAAGGAAGAGGAGGA...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	GACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGCTCTGAAATTTCCTTaGTGCTCGTCTGGGGATCGG	+
Preference number: 4 (lower is better) Translates to: DQLLSPCLVPWGQGERVLALKFP*CSSGDR Trigger: CCGATCCCCAGACGAGCACCAAGGAAATTTCAGAGC...TAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	GGATCCGAGGGCTCTCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGGCTTCAACATACCCTTaGGCTCTGAAATTTCCTTGG	+
Preference number: 4 (lower is better) Translates to: GSEGSPTSSSIPDLSGSRASTYP*ALKFPW Trigger: CCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGC...CCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGAGAGCCCTCGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR TCA 90 bp	CCGAAAGGGGGTCCATGGCTGCACCCACCTCTGTGGGCAGGGGCTGAATGCTTGGCTTCAACATACCCTTaGGCTCTGAAATTTCCTTGG	+
Preference number: 4 (lower is better) Translates to: PKGGPWLHPPLWAGAECLASTYP*ALKFPW Trigger: CCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGC...CAAGCATTCAGCCCCTGCCCACAGAGGTGGGTGCAGCCATGGACCCCCTTTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR TCA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTATATGGCCTTGTCCTTaGGAAATATCAACAGCAGGT	+
Preference number: 4 (lower is better) Translates to: APPCALPSSGPAALSLPRIWPCP*EISTAG Trigger: ACCTGCTGTTGATATTTCTCAAGGACAAGGCCATAT...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR GCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAATAGCTTATGGGCACTaGCCTCTCCAGCTGAAACTC	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGIAYGH*PLQLKL Trigger: GAGTTTCAGCTGGAGAGGGCAGTGCCCATAAGCTAT...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	TTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACCCTGTTTGGTTCTTCTaGTCTGGGCTCTGCACTCTC	+
Preference number: 4 (lower is better) Translates to: FIRTSCSLPASYLGDKGNPVWFF*SGLCTL Trigger: GAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGG...GTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	CCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACCCTGTTTGGTTCTTCTaGTCTGGGCTCTGCACTCTC	+
Preference number: 4 (lower is better) Translates to: PCLVPWGQGERVLVPHDDPVWFF*SGLCTL Trigger: GAGAGTGCAGAGCCCAGAGCAGAAGAACCAAACAGG...GTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	TCCCACCAGCAGCAGCATCCCAGACTTGTCTGGCAGCAGGCTGTCCCTGCATCCCTTCCCCACACACGCTaGCATGTTCTTCTATTTCTC	+
Preference number: 4 (lower is better) Translates to: SHQQQHPRLVWQQAVPASLPHTR*HVLLFL Trigger: GAGAAATAGAAGAACATGCCAGCGTGTGTGGGGAAG...GGATGCAGGGACAGCCTGCTGCCAGACAAGTCTGGGATGCTGCTGCTGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTAATACTGAAGAAACCTaGACAAATAGGACACTGTCC	+
Preference number: 4 (lower is better) Translates to: APPCALPSSGPAALSLPRNTEET*TNRTLS Trigger: GGACAGTGTCCTATTTGTGCAGGTTTCTTCAGTATT...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAGAAAATGACACCACATaGCTGATCTTCACAGGAGCC	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGENDTT*LIFTGA Trigger: GGCTCCTGTGAAGATCAGCCATGTGGTGTCATTTTC...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CTGAGAACTCGAGTTGGACAACGATCTCCTTGGCTCCTGCACTTTCCTCCTCTTCCGCCCCAGAGGCCCTaGCTGCAACTGCTTCAACAT	+
Preference number: 4 (lower is better) Translates to: LRTRVGQRSPWLLHFPPLPPQRP*LQLLQH Trigger: ATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGG...AAGAGGAGGAAAGTGCAGGAGCCAAGGAGATCGTTGTCCAACTCGAGTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGATCCTGTCCTCCTATTTaGCTGAGAACTCGAGTTGGA	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGSCPPI*LRTRVG Trigger: TCCAACTCGAGTTCTCAGCCAAATAGGAGGACAGGA...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	GACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTACTTCCCCACACACGCTaGCATGTTCTTCTATTTCTC	+
Preference number: 4 (lower is better) Translates to: DQLLSPCLVPWGQGERVLLPHTR*HVLLFL Trigger: GAGAAATAGAAGAACATGCCAGCGTGTGTGGGGAAG...TAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	TTCTTTAAAGCAGAATTGAACTACCACAGCTCCAGGGGAGACACTGTGGTCCAATGTCCTGAGGGCAGCTaGGCCAGGGTCCCCTGTGAC	+
Preference number: 4 (lower is better) Translates to: FFKAELNYHSSRGDTVVQCPEGS*ARVPCD Trigger: GTCACAGGGGACCCTGGCTCAGCTGCCCTCAGGACA...TTGGACCACAGTGTCTCCCCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAGCTTCAACATACCCTTaGGCTCTGAAATTTCCTTGG	+
Preference number: 4 (lower is better) Translates to: PSSGPAALSLPRTLGTRGASTYP*ALKFPW Trigger: CCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGC...TCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR GCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTCAGCAGAAAGCACCATaGGGGCTGCCCGCCCCAGAG	+
Preference number: 4 (lower is better) Translates to: QLQGRHCGPTISNSWNEIQQKAP*GLPAPE Trigger: CTCTGGGGCGGGCAGCCCGCATGGTGCTTTCTGCTG...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CCTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCCGCCCCAGAGGCCCTaGCTGCAACTGCTTCAACAT	+
Preference number: 4 (lower is better) Translates to: PSILFYFYPKPHPVPSLHPPQRP*LQLLQH Trigger: ATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGG...ATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCATGGCGGCGAGCTCTCTaGGGAGGAGACCCACAGCAC	+
Preference number: 4 (lower is better) Translates to: HMMTSPGEKGKRAQFFKAWRRAL*GGDPQH Trigger: GTGCTGTGGGTCTCCTCCCCAGAGAGCTCGCCGCCA...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	TTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCACTGCCCTCTCCAGCTaGAACTCCACTTTCAGTTGT	+
Preference number: 4 (lower is better) Translates to: FISTQSPTLCPPFIRTSCTALSS*NSTFSC Trigger: ACAACTGAAAGTGGAGTTTCAGCTGGAGAGGGCAGT...GCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	GGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTTGCTCAAACTGGCGGCGAGCTCTCTaGGGAGGAGACCCACAGCAC	+
Preference number: 4 (lower is better) Translates to: GRHCGPTISNSWNEICSNWRRAL*GGDPQH Trigger: GTGCTGTGGGTCTCCTCCCCAGAGAGCTCGCCGCCA...GTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CCTAGCATTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATTTGGTTCTTCTGCTCTaGGCTCTGCACTCTCTGCAC	+
Preference number: 4 (lower is better) Translates to: PSILFYFYPKPHPVPSLHLVLLL*ALHSLH Trigger: GTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAA...ATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAATGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCACAGGGGACCACGGGATaGGTTTTTGTGCCCATGAGC	+
Preference number: 4 (lower is better) Translates to: HMMTSPGEKGKRAQFFKAQGTTG*VFVPMS Trigger: GCTCATGGGCACAAAAACCCATCCCGTGGTCCCCTG...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	TTCCCTTCCACCACCCGCTCTCAATCTGTCTTCTACTTTGGGGAGCATCTCTACACATCTGTAGAGTTCTaGTTAAGCCCAGAGCTCCCA	+
Preference number: 4 (lower is better) Translates to: FPSTTRSQSVFYFGEHLYTSVEF*LSPELP Trigger: TGGGAGCTCTGGGCTTAACCAGAACTCTACAGATGT...GTAGAGATGCTCCCCAAAGTAGAAGACAGATTGAGAGCGGGTGGTGGAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	TTTCAGAGTCATCTGACTACATCTGAGACAGATACCCATGAAGAACACAGAAGGTTGGGCTTACCACACTaGCTGGAGGGGCCTTACGGG	+
Preference number: 4 (lower is better) Translates to: FQSHLTTSETDTHEEHRRLGLPH*LEGPYG Trigger: CCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAA...CCTTCTGTGTTCTTCATGGGTATCTGTCTCAGATGTAGTCAGATGACTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	GGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTTGCTCAAACAGAAGCTGGCTGGGGTaGGGGGCTCTCTCCACAAGT	+
Preference number: 4 (lower is better) Translates to: GRHCGPTISNSWNEICSNRSWLG*GALSTS Trigger: ACTTGTGGAGAGAGCCCCCCACCCCAGCCAGCTTCT...GTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
3UTR CAA 72 bp	CATCACTTTTGGTCTGAGGTCGGTGCTGTCTTTGTCTaGTCCTTCCTGTCCTCCTATTTGGCTGAGAACTCG	+
Preference number: 4 (lower is better) Translates to: HHFWSEVGAVFV*SFLSSYLAENS Trigger: CGAGTTCTCAGCCAAATAGGAGGACAGGAAGGACAAGACAAAGACAGCACCGACCTCAGACCAAAAGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
3UTR CAA 72 bp	ACCGTCATCACTTTTGGTCTGAGGTCGGTGCTGTCTTaGTCTTGTCCTTCCTGTCCTCCTATTTGGCTGAGA	+
Preference number: 4 (lower is better) Translates to: TVITFGLRSVLS*SCPSCPPIWLR Trigger: TCTCAGCCAAATAGGAGGACAGGAAGGACAAGACAAAGACAGCACCGACCTCAGACCAAAAGTGATGACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTGGACAACGATCTCCTTaGCTCCTGCACTTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: QLQGRHCGPTISNSWNEIGQRSP*LLHFPP Trigger: AGGAGGAAAGTGCAGGAGCCAAGGAGATCGTTGTCC...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTACTGCCCTCTCCAGCTaGAACTCCACTTTCAGTTGT	+
Preference number: 4 (lower is better) Translates to: QLQGRHCGPTISNSWNEITALSS*NSTFSC Trigger: ACAACTGAAAGTGGAGTTTCAGCTGGAGAGGGCAGT...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATCTGACTACAAACATCCGGACCCCTaGGCGGTTCTTCCCCGACTT	+
Preference number: 4 (lower is better) Translates to: LKIHFTPMRSKVSESSDYKHPDP*AVLPRL Trigger: AAGTCGGGGAAGAACCGCTCAGGGGTCCGGATGTTT...GTAGTCAGATGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGATCTCCTTGGCTCCTaGACTTTCCTCCTCTTCCTT	+
Preference number: 4 (lower is better) Translates to: HMMTSPGEKGKRAQFFKADLLGS*TFLLFL Trigger: AAGGAAGAGGAGGAAAGTGCAGGAGCCAAGGAGATC...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATTGAACTACCACGCTCTGAAATTTCCTTaGTGCTCGTCTGGGGATCGG	+
Preference number: 4 (lower is better) Translates to: PGEKGKRAQFFKAELNYHALKFP*CSSGDR Trigger: CCGATCCCCAGACGAGCACCAAGGAAATTTCAGAGC...GTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CTTAAGAACCATGTGAGTAGGAAGAGGGTTTTCATGTTACTGAAGATCCATTTCCCGCCCCAGAGGCCCTaGCTGCAACTGCTTCAACAT	+
Preference number: 4 (lower is better) Translates to: LKNHVSRKRVFMLLKIHFPPQRP*LQLLQH Trigger: ATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGG...GAAATGGATCTTCAGTAACATGAAAACCCTCTTCCTACTCACATGGTTCTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATAAGAAGCTGGCTGGGGTaGGGGGCTCTCTCCACAAGT	+
Preference number: 4 (lower is better) Translates to: LRPWRDHQFYQRSSKGKIRSWLG*GALSTS Trigger: ACTTGTGGAGAGAGCCCCCCACCCCAGCCAGCTTCT...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATATCACAGATAGGGCACTaGACCCAGGAAGGTGGCGGC	+
Preference number: 4 (lower is better) Translates to: LRPWRDHQFYQRSSKGKISQIGH*TQEGGG Trigger: GCCGCCACCTTCCTGGGTCCAGTGCCCTATCTGTGA...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	TTCTTTAAAGCAGAATTGAACTACCACAGCTCCAGGGGAGACACTGTGGTCCAAGAAAATGACACCACATaGCTGATCTTCACAGGAGCC	+
Preference number: 4 (lower is better) Translates to: FFKAELNYHSSRGDTVVQENDTT*LIFTGA Trigger: GGCTCCTGTGAAGATCAGCCATGTGGTGTCATTTTC...TTGGACCACAGTGTCTCCCCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	GGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTTGCTCAAACTCCCCTGTGACTGTCTaGGTTCAGCAAGTTCTCCAC	+
Preference number: 4 (lower is better) Translates to: GRHCGPTISNSWNEICSNSPVTV*VQQVLH Trigger: GTGGAGAACTTGCTGAACCCAGACAGTCACAGGGGA...GTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	AGAACACAGAAGGTCAAGGTCATATGGAACTCGTTAGTTTCACACTCAAGACTCAGCCGTCTTCCTGTTTaGTTCTTCTGCTCTGGGCTC	+
Preference number: 4 (lower is better) Translates to: RTQKVKVIWNSLVSHSRLSRLPV*FFCSGL Trigger: GAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCT...GAGTCTTGAGTGTGAAACTAACGAGTTCCATATGACCTTGACCTTCTGTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
3UTR CAA 72 bp	GAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAGAATaGAACTACCACAGCTCCAGGGGAGACACTGTGGTC	+
Preference number: 4 (lower is better) Translates to: EKGKRAQFFKAE*NYHSSRGDTVV Trigger: GACCACAGTGTCTCCCCTGGAGCTGTGGTAGTTCAATTCTGCTTTAAAGAATTGTGCACGCTTCCCTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR TCA 90 bp	CAGCTCCAGGGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTGGATATTTGGGATCCTaGGAGGAAAATGACACCACA	+
Preference number: 4 (lower is better) Translates to: QLQGRHCGPTISNSWNEIGYLGS*EENDTT Trigger: TGTGGTGTCATTTTCCTCTCAGGATCCCAAATATCC...AATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCCCTGGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	TCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCAGCCATTATTTCAGCCAGGGTCCCCTGTaGCTGTCTGGGTTCAGCAAG	+
Preference number: 4 (lower is better) Translates to: SFTHLPKQHNFIIPSHYFSQGPL*LSGFSK Trigger: CTTGCTGAACCCAGACAGTCACAGGGGACCCTGGCT...GAAATAATGGCTGGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATATCCTCCTCTTCCTTCTaGCCACAGCCGTCTTCCTGT	+
Preference number: 4 (lower is better) Translates to: LRPWRDHQFYQRSSKGKISSSSF*PQPSSC Trigger: ACAGGAAGACGGCTGTGGGCAGAAGGAAGAGGAGGA...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	CTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATCTGACTACATAGCTTATGGGCACTaGCCTCTCCAGCTGAAACTC	+
Preference number: 4 (lower is better) Translates to: LKIHFTPMRSKVSESSDYIAYGH*PLQLKL Trigger: GAGTTTCAGCTGGAGAGGGCAGTGCCCATAAGCTAT...GTAGTCAGATGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CACACTCAAGACTCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCGGTTCTTCCCCGACTTaGAGTCAGTGCGGGACATTA	+
Preference number: 4 (lower is better) Translates to: HTQDSFTHLPKQHNFIIPGSSPT*SQCGTL Trigger: TAATGTCCCGCACTGACTCCAAGTCGGGGAAGAACC...GGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGAGTCTTGAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTACATCTGTAGAGTTCTaGTTAAGCCCAGAGCTCCCA	+
Preference number: 4 (lower is better) Translates to: IIYSLERNLSGSLKNHVSTSVEF*LSPELP Trigger: TGGGAGCTCTGGGCTTAACCAGAACTCTACAGATGT...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CACACTCAAGACTCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCAGCCGTCTTCCTGTTTaGTTCTTCTGCTCTGGGCTC	+
Preference number: 4 (lower is better) Translates to: HTQDSFTHLPKQHNFIIPSRLPV*FFCSGL Trigger: GAGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCT...GGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGAGTCTTGAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATAGGACAACGATCTCCTTaGCTCCTGCACTTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: LRPWRDHQFYQRSSKGKIGQRSP*LLHFPP Trigger: AGGAGGAAAGTGCAGGAGCCAAGGAGATCGTTGTCC...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	GGGAGACACTGTGGTCCAACTATCTCAAATAGTTGGAATGAGATTTGCTCAAACATCCTGAGAGGAAAATaGCACCACATGGCTGATCTT	+
Preference number: 4 (lower is better) Translates to: GRHCGPTISNSWNEICSNILRGK*HHMADL Trigger: AAGATCAGCCATGTGGTGTCATTTTCCTCTCAGGAT...GTTTGAGCAAATCTCATTCCAACTATTTGAGATAGTTGGACCACAGTGTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTATCCTGAGAGGAAAATaGCACCACATGGCTGATCTT	+
Preference number: 4 (lower is better) Translates to: IIYSLERNLSGSLKNHVSILRGK*HHMADL Trigger: AAGATCAGCCATGTGGTGTCATTTTCCTCTCAGGAT...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CAATTCTACCAAAGAAGTTCTAAGGGGAAAATATCCTTTGAGAATTGGGTACCAAGGACTGATGACGTGTaGAAGGTTGGGAGCAGGTCA	+
Preference number: 4 (lower is better) Translates to: QFYQRSSKGKISFENWVPRTDDV*KVGSRS Trigger: TGACCTGCTCCCAACCTTTCACACGTCATCAGTCCT...TGGTACCCAATTCTCAAAGGATATTTTCCCCTTAGAACTTCTTTGGTAGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATCTGACTACCATACCCTTGAGCTCTaGAATTTCCTTGGTGCTCCA	+
Preference number: 4 (lower is better) Translates to: LKIHFTPMRSKVSESSDYHTLEL*NFLGAP Trigger: TGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATG...GTAGTCAGATGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CCA 90 bp	TTCATGTTACTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATTGGTTCTTCTGCTCTaGGCTCTGCACTCTCTGCAC	+
Preference number: 4 (lower is better) Translates to: FMLLKIHFTPMRSKVSESLVLLL*ALHSLH Trigger: GTGCAGAGAGTGCAGAGCCCAGAGCAGAAGAACCAA...TGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAGTAACATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR TCA 90 bp	CTAAGGCCTTGGAGAGATCATCAATTCTACCAAAGAAGTTCTAAGGGGAAAATAGGATATTTGGGATCCTaGGAGGAAAATGACACCACA	+
Preference number: 4 (lower is better) Translates to: LRPWRDHQFYQRSSKGKIGYLGS*EENDTT Trigger: TGTGGTGTCATTTTCCTCTCAGGATCCCAAATATCC...TATTTTCCCCTTAGAACTTCTTTGGTAGAATTGATGATCTCTCCAAGGCCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR GCA 90 bp	ATCATCTACTCCTTAGAAAGGAATCTCTCTGGCTCCCTTAAGAACCATGTGAGTAATACTGAAGAAACCTaGACAAATAGGACACTGTCC	+
Preference number: 4 (lower is better) Translates to: IIYSLERNLSGSLKNHVSNTEET*TNRTLS Trigger: GGACAGTGTCCTATTTGTGCAGGTTTCTTCAGTATT...ACTCACATGGTTCTTAAGGGAGCCAGAGAGATTCCTTTCTAAGGAGTAGATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CCA 90 bp	TCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCAGCCATTATTTCTCCTGTCCTCCTATTTaGCTGAGAACTCGAGTTGGA	+
Preference number: 4 (lower is better) Translates to: SFTHLPKQHNFIIPSHYFSCPPI*LRTRVG Trigger: TCCAACTCGAGTTCTCAGCCAAATAGGAGGACAGGA...GAAATAATGGCTGGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
3UTR CAA 72 bp	AATTCTACCAAAGAAGTTCTAAGGGGAAAATATCCTTaGAGAATTGGGTACCATAGTGACAAAGCCTTGACA	+
Preference number: 4 (lower is better) Translates to: NSTKEVLRGKYP*RIGYHSDKALT Trigger: TGTCAAGGCTTTGTCACTATGGTACCCAATTCTCAAAGGATATTTTCCCCTTAGAACTTCTTTGGTAGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS GCA 90 bp	ACTGGCTGGAGGGGCCTTACGGGCAGCAGAAAGCACCATGCGGGCTaGCCGCCCCAGAGGCCCTGGCTGCAACTGCTTCAACATACCCTT	+
Preference number: 5 (lower is better) Translates to: TGWRGLTGSRKHHAG*PPQRPWLQLLQHTL Trigger: AAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCATGGTGCTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CCA 90 bp	GGGACCTGGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACTGGCTaGAGGGGCCTTACGGGCAGCAGAAAGCACCATGCGGGCTGCCCG	+
Preference number: 5 (lower is better) Translates to: GTWFSVAVVWAYHTG*RGLTGSRKHHAGCP Trigger: CGGGCAGCCCGCATGGTGCTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CCA 90 bp	GGCTGGGACCTGGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACTaGCTGGAGGGGCCTTACGGGCAGCAGAAAGCACCATGCGGGCTG	+
Preference number: 5 (lower is better) Translates to: GWDLVLRGCCLGLPH*LEGPYGQQKAPCGL Trigger: CAGCCCGCATGGTGCTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CCA 90 bp	GCTCTGGGCTCTGCACTCTCTGCACGGCTGGGACCTGGTTCTCCGTaGCTGTTGTTTGGGCTTACCACACTGGCTGGAGGGGCCTTACGG	+
Preference number: 5 (lower is better) Translates to: ALGSALSARLGPGSP*LLFGLTTLAGGALR Trigger: CCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCCCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	GCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTCTCCGTGGCTGTTGTTaGGGCTTACCACACTGGCTG	+
Preference number: 5 (lower is better) Translates to: APPCALPSSGPAALSLPRLRGCC*GLPHWL Trigger: CAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAG...ACGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS TCA 90 bp	CTGCCCGCCCCAGAGGCCCTGGCTGCAACTGCTTCAACATACCCTTaGGCTCTGAAATTTCCTTGGTGCTCCAGGGGACCACGGGATGGG	+
Preference number: 5 (lower is better) Translates to: LPAPEALAATASTYP*ALKFPWCSRGPRDG Trigger: CCCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS CCA 90 bp	TGCACTCTCTGCACGGCTGGGACCTGGTTCTCCGTGGCTGTTGTTTaGGCTTACCACACTGGCTGGAGGGGCCTTACGGGCAGCAGAAAG	+
Preference number: 5 (lower is better) Translates to: CTLCTAGTWFSVAVV*AYHTGWRGLTGSRK Trigger: CTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS GCA 90 bp	GAAAGCACCATGCGGGCTGCCCGCCCCAGAGGCCCTGGCTGCAACTaGTTCAACATACCCTTGAGCTCTGAAATTTCCTTGGTGCTCGTC	+
Preference number: 5 (lower is better) Translates to: ESTMRAARPRGPGCN*FNIPLSSEISLVLV Trigger: GACGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCATGGTGCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS GCA 90 bp	GCAGCAGAAAGCACCATGCGGGCTGCCCGCCCCAGAGGCCCTGGCTaGAACTGCTTCAACATACCCTTGAGCTCTGAAATTTCCTTGGTG	+
Preference number: 5 (lower is better) Translates to: AAESTMRAARPRGPG*NCFNIPLSSEISLV Trigger: CACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCATGGTGCTTTCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS GCA 90 bp	GAAAGCACCATGCGGGCTGCCCGCCCCAGAGGCCCTGGCTGCAACTaGTTCAACATACCCTTGAGCTCTGAAATTTCCTTGGTGCTCCAG	+
Preference number: 5 (lower is better) Translates to: ESTMRAARPRGPGCN*FNIPLSSEISLVLQ Trigger: CTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCATGGTGCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS CCA 90 bp	GTCAGCCAGGGCCTAGGATCAGACTCCAGCACATCTGTAGAGTTCTaGTTAAGCCCAGAGCTCCCAGGGGCTGAGGGATCTACTACAGGG	+
Preference number: 5 (lower is better) Translates to: VSQGLGSDSSTSVEF*LSPELPGAEGSTTG Trigger: CCCTGTAGTAGATCCCTCAGCCCCTGGGAGCTCTGGGCTTAACCAGAACTCTACAGATGTGCTGGAGTCTGATCCTAGGCCCTGGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	AGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCTCTCTCCCTGCCTCGTGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTG	+
Preference number: 5 (lower is better) Translates to: SPTLCPPFIRTSCSLPASCFNIP*SSEISL Trigger: CAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCA...CGAGGCAGGGAGAGAGCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CAA 90 bp	TGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTGCCACATGATGACGTCCAGCCGTCTTCCTGTTaGGTTCTTCTGCTCTGGGCT	+
Preference number: 5 (lower is better) Translates to: CLVPWGQGERVLVPHDDVQPSSC*VLLLWA Trigger: AGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCTG...GACGTCATCATGTGGCACTAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS TCA 90 bp	GCTGAAACTCCACTTTCAGTTGTCCAGTCTTGTCCTGAGGGCAGCTaGGCCAGGGTCCCCTGTGACTGTCTGGGTTCAGCAAGTTCTCCA	+
Preference number: 5 (lower is better) Translates to: AETPLSVVQSCPEGS*ARVPCDCLGSASSP Trigger: TGGAGAACTTGCTGAACCCAGACAGTCACAGGGGACCCTGGCTCAGCTGCCCTCAGGACAAGACTGGACAACTGAAAGTGGAGTTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS TCA 90 bp	AGGAACGCACTCGTAGGAAGGCCAGGCCAAAGGACTGATGACGTGTaGAAGGTTGGGAGCAGGTCAATCGAAGTCGATCCCAGGACTCTC	+
Preference number: 5 (lower is better) Translates to: RNALVGRPGQRTDDV*KVGSRSIEVDPRTL Trigger: GAGAGTCCTGGGATCGACTTCGATTGACCTGCTCCCAACCTTTCACACGTCATCAGTCCTTTGGCCTGGCCTTCCTACGAGTGCGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS-3UTR CAA 90 bp	TTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCAGCTGCGGTTCTCCGTGGCTGTaGTTTGGGCTTACCACACTG	+
Preference number: 5 (lower is better) Translates to: FISTQSPTLCPPFIRTSCGSPWL*FGLTTL Trigger: CAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACC...GCAGCTGGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	TTCTCTTTTATTTCTACCCAAAGCCCCACCCTGTGCCCTCCCTTCATCAGGACCCAGCCGTCTTCCTGTTaGGTTCTTCTGCTCTGGGCT	+
Preference number: 5 (lower is better) Translates to: FSFISTQSPTLCPPFIRTQPSSC*VLLLWA Trigger: AGCCCAGAGCAGAAGAACCAAACAGGAAGACGGCTG...GGTCCTGATGAAGGGAGGGCACAGGGTGGGGCTTTGGGTAGAAATAAAAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106950.8
CDS CCA 90 bp	CCCTTGAGCTCTGAAATTTCCTTGGTGCTCCAGGGGACCACGGGATaGGTTTTTGTGCCCATGAGCTATATGGCCTTGTCCTTGAGAAAT	+
Preference number: 5 (lower is better) Translates to: PLSSEISLVLQGTTG*VFVPMSYMALSLRN Trigger: ATTTCTCAAGGACAAGGCCATATAGCTCATGGGCACAAAAACCCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CAA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCACTCCGTGGCTGTTGTTaGGGCTTACCACACTGGCTG	+
Preference number: 5 (lower is better) Translates to: HMMTSPGEKGKRAQFFKALRGCC*GLPHWL Trigger: CAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAG...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	GACCAGCTGCTCTCTCCCTGCCTCGTACCTTGGGGACAAGGGGAACGGGTGTTAGTTCTTCTATTTCTCTaGCTGAGAACTGTAATTCAC	+
Preference number: 5 (lower is better) Translates to: DQLLSPCLVPWGQGERVLVLLFL*LRTVIH Trigger: GTGAATTACAGTTCTCAGCAAGAGAAATAGAAGAAC...TAACACCCGTTCCCCTTGTCCCCAAGGTACGAGGCAGGGAGAGAGCAGCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CCA 90 bp	TGCTTCAACATACCCTTGAGCTCTGAAATTTCCTTGGTGCTCGTCTaGGGATCGGGGAAGAATGTCCTCCGGATAGAAGGATTAGTCAGC	+
Preference number: 5 (lower is better) Translates to: CFNIPLSSEISLVLV*GSGKNVLRIEGLVS Trigger: GCTGACTAATCCTTCTATCCGGAGGACATTCTTCCCCGATCCCCAGACGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS GCA 90 bp	GAAAGCACAGCCACAGTTTCCAACATCAATATAGCTTATGGGCACTaGCCTCTCCAGCTGAAACTCCACTTTCAGTTGTCCAGTCTTGTC	+
Preference number: 5 (lower is better) Translates to: ESTATVSNINIAYGH*PLQLKLHFQLSSLV Trigger: GACAAGACTGGACAACTGAAAGTGGAGTTTCAGCTGGAGAGGGCAGTGCCCATAAGCTATATTGATGTTGGAAACTGTGGCTGTGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CCA 90 bp	TCTGTAGGAAAGCACAGCCACAGTTTCCAACATCAATATAGCTTATaGGCACTGCCCTCTCCAGCTGAAACTCCACTTTCAGTTGTCCAG	+
Preference number: 5 (lower is better) Translates to: SVGKHSHSFQHQYSL*ALPSPAETPLSVVQ Trigger: CTGGACAACTGAAAGTGGAGTTTCAGCTGGAGAGGGCAGTGCCCATAAGCTATATTGATGTTGGAAACTGTGGCTGTGCTTTCCTACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS-3UTR CAA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAATGACGTGTGAAAGGTaGGGAGCAGGTCAATCGAAG	+
Preference number: 5 (lower is better) Translates to: HMMTSPGEKGKRAQFFKAMTCER*GAGQSK Trigger: CTTCGATTGACCTGCTCCCAACCTTTCACACGTCAT...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	CACACTCAAGACTCATTCACTCATCTTCCCAAACAGCATAACTTTATAATTCCCGGTTCTCCGTGGCTGTaGTTTGGGCTTACCACACTG	+
Preference number: 5 (lower is better) Translates to: HTQDSFTHLPKQHNFIIPGSPWL*FGLTTL Trigger: CAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACC...GGGAATTATAAAGTTATGCTGTTTGGGAAGATGAGTGAATGAGTCTTGAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	CTTAAGAACCATGTGAGTAGGAAGAGGGTTTTCATGTTACTGAAGATCCATTTCATGACGTGTGAAAGGTaGGGAGCAGGTCAATCGAAG	+
Preference number: 5 (lower is better) Translates to: LKNHVSRKRVFMLLKIHFMTCER*GAGQSK Trigger: CTTCGATTGACCTGCTCCCAACCTTTCACACGTCAT...GAAATGGATCTTCAGTAACATGAAAACCCTCTTCCTACTCACATGGTTCTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS-3UTR CAA 90 bp	CACATGATGACGTCTCCTGGGGAAAAAGGGAAGCGTGCACAATTCTTTAAAGCAATGAGCTATATGGCCTaGTCCTTGAGAAATATCAAC	+
Preference number: 5 (lower is better) Translates to: HMMTSPGEKGKRAQFFKAMSYMA*SLRNIN Trigger: GTTGATATTTCTCAAGGACAAGGCCATATAGCTCAT...TGCTTTAAAGAATTGTGCACGCTTCCCTTTTTCCCCAGGAGACGTCATCATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS-3UTR CAA 90 bp	CAATTCTACCAAAGAAGTTCTAAGGGGAAAATATCCTTTGAGAATTGGGTACCATGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTG	+
Preference number: 5 (lower is better) Translates to: QFYQRSSKGKISFENWVPCFNIP*SSEISL Trigger: CAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCA...TGGTACCCAATTCTCAAAGGATATTTTCCCCTTAGAACTTCTTTGGTAGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CAA 90 bp	TTCATGTTACTGAAGATCCATTTCACACCCATGAGAAGTAAAGTTTCAGAGTCATGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTG	+
Preference number: 5 (lower is better) Translates to: FMLLKIHFTPMRSKVSESCFNIP*SSEISL Trigger: CAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCA...TGACTCTGAAACTTTACTTCTCATGGGTGTGAAATGGATCTTCAGTAACATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS-3UTR CAA 90 bp	CTTAAGAACCATGTGAGTAGGAAGAGGGTTTTCATGTTACTGAAGATCCATTTCGTTCTTCTATTTCTCTaGCTGAGAACTGTAATTCAC	+
Preference number: 5 (lower is better) Translates to: LKNHVSRKRVFMLLKIHFVLLFL*LRTVIH Trigger: GTGAATTACAGTTCTCAGCAAGAGAAATAGAAGAAC...GAAATGGATCTTCAGTAACATGAAAACCCTCTTCCTACTCACATGGTTCTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 90 bp	GGCTCTGCACTCTCTGCACGGCTGGGACCTGGTTCTCCGTGGCTGTaGTTTGGGCTTACCACACTGGCTGGAGGGGCCTTACGGGCAGCA	+
Preference number: 6 (lower is better) Translates to: GSALSARLGPGSPWL*FGLTTLAGGALRAA Trigger: TGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 90 bp	CTGCACTCTCTGCACGGCTGGGACCTGGTTCTCCGTGGCTGTTGTTaGGGCTTACCACACTGGCTGGAGGGGCCTTACGGGCAGCAGAAA	+
Preference number: 6 (lower is better) Translates to: LHSLHGWDLVLRGCC*GLPHWLEGPYGQQK Trigger: TTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 90 bp	GCTGCCCGCCCCAGAGGCCCTGGCTGCAACTGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTGGTGCTCCAGGGGACCACGGGATGG	+
Preference number: 6 (lower is better) Translates to: AARPRGPGCNCFNIP*SSEISLVLQGTTGW Trigger: CCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS CAA 72 bp	CTCTCTGCACGGCTGGGACCTGGTTCTCCGTGGCTGTaGTTTGGGCTTACCACACTGGCTGGAGGGGCCTTA	+
Preference number: 6 (lower is better) Translates to: LSARLGPGSPWL*FGLTTLAGGAL Trigger: TAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAGGTCCCAGCCGTGCAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS GCA 72 bp	AGCACCATGCGGGCTGCCCGCCCCAGAGGCCCTGGCTaGAACTGCTTCAACATACCCTTGAGCTCTGAAATT	+
Preference number: 6 (lower is better) Translates to: STMRAARPRGPG*NCFNIPLSSEI Trigger: AATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCATGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS CCA 72 bp	TTCTCCGTGGCTGTTGTTTGGGCTTACCACACTGGCTaGAGGGGCCTTACGGGCAGCAGAAAGCACCATGCG	+
Preference number: 6 (lower is better) Translates to: FSVAVVWAYHTG*RGLTGSRKHHA Trigger: CGCATGGTGCTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CCA 72 bp	CTGGTTCTCCGTGGCTGTTGTTTGGGCTTACCACACTaGCTGGAGGGGCCTTACGGGCAGCAGAAAGCACCA	+
Preference number: 6 (lower is better) Translates to: LVLRGCCLGLPH*LEGPYGQQKAP Trigger: TGGTGCTTTCTGCTGCCCGTAAGGCCCCTCCAGCCAGTGTGGTAAGCCCAAACAACAGCCACGGAGAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 90 bp	TCACCATCTTTAAACATCCGGACCCCTGAGCGGTTCTTCCCCGACTaGGAGTCAGTGCGGGACATTAGCATGGTGGCAGGGAGCAGGGTG	+
Preference number: 6 (lower is better) Translates to: SPSLNIRTPERFFPD*ESVRDISMVAGSRV Trigger: CACCCTGCTCCCTGCCACCATGCTAATGTCCCGCACTGACTCCAAGTCGGGGAAGAACCGCTCAGGGGTCCGGATGTTTAAAGATGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS TCA 72 bp	TGTAGAGTTCTGGTTAAGCCCAGAGCTCCCAGGGGCTaGGGGATCTACTACAGGGTCAGCCAGAGAGCCCAG	+
Preference number: 6 (lower is better) Translates to: CRVLVKPRAPRG*GIYYRVSQRAQ Trigger: CTGGGCTCTCTGGCTGACCCTGTAGTAGATCCCTCAGCCCCTGGGAGCTCTGGGCTTAACCAGAACTCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS GCA 72 bp	ATGCGGGCTGCCCGCCCCAGAGGCCCTGGCTGCAACTaGTTCAACATACCCTTGAGCTCTGAAATTTCCTTG	+
Preference number: 6 (lower is better) Translates to: MRAARPRGPGCN*FNIPLSSEISL Trigger: CAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGGGCGGGCAGCCCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000142629.8
CDS CAA 72 bp	TTAAACATCCGGACCCCTGAGCGGTTCTTCCCCGACTaGGAGTCAGTGCGGGACATTAGCATGGTGGCAGGG	+
Preference number: 6 (lower is better) Translates to: LNIRTPERFFPD*ESVRDISMVAG Trigger: CCCTGCCACCATGCTAATGTCCCGCACTGACTCCAAGTCGGGGAAGAACCGCTCAGGGGTCCGGATGTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CCA 72 bp	GGCCTAGGATCAGACTCCAGCACATCTGTAGAGTTCTaGTTAAGCCCAGAGCTCCCAGGGGCTGAGGGATCT	+
Preference number: 6 (lower is better) Translates to: GLGSDSSTSVEF*LSPELPGAEGS Trigger: AGATCCCTCAGCCCCTGGGAGCTCTGGGCTTAACCAGAACTCTACAGATGTGCTGGAGTCTGATCCTAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 72 bp	CCCAGAGGCCCTGGCTGCAACTGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTGGTGCTCCAGGGGACC	+
Preference number: 6 (lower is better) Translates to: PRGPGCNCFNIP*SSEISLVLQGT Trigger: GGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS TCA 72 bp	CTCGTAGGAAGGCCAGGCCAAAGGACTGATGACGTGTaGAAGGTTGGGAGCAGGTCAATCGAAGTCGATCCC	+
Preference number: 6 (lower is better) Translates to: LVGRPGQRTDDV*KVGSRSIEVDP Trigger: GGGATCGACTTCGATTGACCTGCTCCCAACCTTTCACACGTCATCAGTCCTTTGGCCTGGCCTTCCTACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CAA 72 bp	GAAGGCCAGGCCAAAGGACTGATGACGTGTGAAAGGTaGGGAGCAGGTCAATCGAAGTCGATCCCAGGACTC	+
Preference number: 6 (lower is better) Translates to: EGQAKGLMTCER*GAGQSKSIPGL Trigger: GAGTCCTGGGATCGACTTCGATTGACCTGCTCCCAACCTTTCACACGTCATCAGTCCTTTGGCCTGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CAA 72 bp	CCCAGAGGCCCTGGCTGCAACTGCTTCAACATACCCTaGAGCTCTGAAATTTCCTTGGTGCTCGTCTGGGGA	+
Preference number: 6 (lower is better) Translates to: PRGPGCNCFNIP*SSEISLVLVWG Trigger: TCCCCAGACGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGGGCCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 90 bp	CCTGGCTGCAACTGCTTCAACATACCCTTGAGCTCTGAAATTTCCTaGGTGCTCCAGGGGACCACGGGATGGGTTTTTGTGCCCATGAGC	+
Preference number: 6 (lower is better) Translates to: PGCNCFNIPLSSEIS*VLQGTTGWVFVPMS Trigger: GCTCATGGGCACAAAAACCCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTTGCAGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS TCA 72 bp	AGTCAGGAAATCACCATCTTTAAACATCCGGACCCCTaGGCGGTTCTTCCCCGACTTGGAGTCAGTGCGGGA	+
Preference number: 6 (lower is better) Translates to: SQEITIFKHPDP*AVLPRLGVSAG Trigger: TCCCGCACTGACTCCAAGTCGGGGAAGAACCGCTCAGGGGTCCGGATGTTTAAAGATGGTGATTTCCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CCA 72 bp	TCTGAAATTTCCTTGGTGCTCCAGGGGACCACGGGATaGGTTTTTGTGCCCATGAGCTATATGGCCTTGTCC	+
Preference number: 6 (lower is better) Translates to: SEISLVLQGTTG*VFVPMSYMALS Trigger: GGACAAGGCCATATAGCTCATGGGCACAAAAACCCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS CCA 72 bp	ATACCCTTGAGCTCTGAAATTTCCTTGGTGCTCGTCTaGGGATCGGGGAAGAATGTCCTCCGGATAGAAGGA	+
Preference number: 6 (lower is better) Translates to: IPLSSEISLVLV*GSGKNVLRIEG Trigger: TCCTTCTATCCGGAGGACATTCTTCCCCGATCCCCAGACGAGCACCAAGGAAATTTCAGAGCTCAAGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 72 bp	AACTGCTTCAACATACCCTTGAGCTCTGAAATTTCCTaGGTGCTCGTCTGGGGATCGGGGAAGAATGTCCTC	+
Preference number: 6 (lower is better) Translates to: NCFNIPLSSEIS*VLVWGSGKNVL Trigger: GAGGACATTCTTCCCCGATCCCCAGACGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8
CDS CAA 72 bp	AACTGCTTCAACATACCCTTGAGCTCTGAAATTTCCTaGGTGCTCCAGGGGACCACGGGATGGGTTTTTGTG	+
Preference number: 6 (lower is better) Translates to: NCFNIPLSSEIS*VLQGTTGWVFV Trigger: CACAAAAACCCATCCCGTGGTCCCCTGGAGCACCAAGGAAATTTCAGAGCTCAAGGGTATGTTGAAGCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS GCA 72 bp	GCCACAGTTTCCAACATCAATATAGCTTATGGGCACTaGCCTCTCCAGCTGAAACTCCACTTTCAGTTGTCC	+
Preference number: 6 (lower is better) Translates to: ATVSNINIAYGH*PLQLKLHFQLS Trigger: GGACAACTGAAAGTGGAGTTTCAGCTGGAGAGGGCAGTGCCCATAAGCTATATTGATGTTGGAAACTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094130.4 ENSMUST00000106950.8 ENSMUST00000146450.8
CDS CAA 72 bp	TGGGTTTTTGTGCCCATGAGCTATATGGCCTTGTCCTaGAGAAATATCAACAGCAGGTACATACGTCTGGGG	+
Preference number: 6 (lower is better) Translates to: WVFVPMSYMALS*RNINSRYIRLG Trigger: CCCCAGACGTATGTACCTGCTGTTGATATTTCTCAAGGACAAGGCCATATAGCTCATGGGCACAAAAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142629.8
CDS CAA 72 bp	ACGGGATGGGTTTTTGTGCCCATGAGCTATATGGCCTaGTCCTTGAGAAATATCAACAGCAGGTACATACGT	+
Preference number: 6 (lower is better) Translates to: TGWVFVPMSYMA*SLRNINSRYIR Trigger: ACGTATGTACCTGCTGTTGATATTTCTCAAGGACAAGGCCATATAGCTCATGGGCACAAAAACCCATCCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142629.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu