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Pregenerated sensors for XLR3B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073125

Ensembl transcript IDs: ENSMUST00000101486.5

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGAGACCTCATATATAATATCCCTGATGATCCCATACTACATGTaGGATAAATTCCACAAACAAAACATTCTAAGTTACTCCTATCCA +
Preference number: 1 (lower is better)
Translates to: HETSYIISLMIPYYM*DKFHKQNILSYSYP
Trigger: TGGATAGGAGTAACTTAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGGTCTCGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
3UTR GCA 72 bp CTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTaGACTGCTGTCACACAAATCCCAGGGTTTATTTGG +
Preference number: 3 (lower is better)
Translates to: LYPRAGVPYRHI*TAVTQIPGFIW
Trigger: CCAAATAAACCCTGGGATTTGTGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
3UTR GCA 72 bp CCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTaGTGTCACACAAATCCCAGGGTTTATTTGGATTTA +
Preference number: 3 (lower is better)
Translates to: PEGWSSLQTYLH*CHTNPRVYLDL
Trigger: TAAATCCAAATAAACCCTGGGATTTGTGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CCA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACAACTGCACCTGGGTTCTaGCTGTCATCTGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTTAPGF*LSSEER
Trigger: TCTCTCCTCAGATGACAGCCAGAACCCAGGTGCAGT...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CCA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACATGCCAGCAGTGTCAGTaGCCTTCCTTTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTCQQCQ*PSFFCL
Trigger: CAAGCAGAAAAAGGAAGGCCACTGACACTGCTGGCA...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CCA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACACCTGTTTTTCCTTCCTaGCCTGTTGCCTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTPVFPS*PVASLF
Trigger: GAACAGAGAGGCAACAGGCCAGGAAGGAAAAACAGG...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CCA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACAGCAGCAGTCTTTTGCTaGTTATGCAGCATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTAAVFC*LCSIRS
Trigger: ACTTCTGATGCTGCATAACCAGCAAAAGACTGCTGC...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CCA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACATGCCTCTCTTCACAGTaGGTTTTCAGAACATCCTTA +
Preference number: 4 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTCLSSQ*VFRTSL
Trigger: TAAGGATGTTCTGAAAACCCACTGTGAAGAGAGGCA...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CAA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACACATCTGAGGAGAGATTaGGATCCATCCTTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTHLRRD*DPSLSA
Trigger: GGCACTCAAGGATGGATCCAAATCTCTCCTCAGATG...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CAA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACAAGGAGCAGCAGTCTTTaGCTGGTTATGCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTRSSSL*LVMQHQ
Trigger: CTGATGCTGCATAACCAGCAAAAGACTGCTGCTCCT...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS TCA 90 bp GACCAAATCCTGTTTTTCCTTCCTGGCCTGTTGCCTCTCTGTTCCTaGGGAAATAATGTCCTCCCTACCAGCATCAAGGACTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: DQILFFLPGLLPLCS*GNNVLPTSIKDFSV
Trigger: AACAGAGAAGTCCTTGATGCTGGTAGGGAGGACATTATTTCCTCAGGAACAGAGAGGCAACAGGCCAGGAAGGAAAAACAGGATTTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS-3UTR CAA 90 bp CATCTCTACCCGAGGGCTGGAGTTCCCTACAGACATATTTGCACTGCTGTCACATGGCTCTTCGAATTCTaGGACCAAATCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: HLYPRAGVPYRHICTAVTWLFEF*DQILFF
Trigger: GAAAAACAGGATTTGGTCCAAGAATTCGAAGAGCCA...TGTGACAGCAGTGCAAATATGTCTGTAGGGAACTCCAGCCCTCGGGTAGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS GCA 90 bp TCTTCGAATTCTTGGACCAAATCCTGTTTTTCCTTCCTGGCCTGTTaGCTCTCTGTTCCTGAGGAAATAATGTCCTCCCTACCAGCATCA +
Preference number: 5 (lower is better)
Translates to: SSNSWTKSCFSFLAC*LSVPEEIMSSLPAS
Trigger: TGATGCTGGTAGGGAGGACATTATTTCCTCAGGAACAGAGAGGCAACAGGCCAGGAAGGAAAAACAGGATTTGGTCCAAGAATTCGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS TCA 90 bp AGAATCCCTCAGTACCTCCAGTTTCTCCAAGTATTTTTCACACAGTaGTTTAAATTCCTTCATTCTGTTCTTCTGAAGAGTGAGACTTTC +
Preference number: 5 (lower is better)
Translates to: RIPQYLQFLQVFFTQ*FKFLHSVLLKSETF
Trigger: GAAAGTCTCACTCTTCAGAAGAACAGAATGAAGGAATTTAAATCACTGTGTGAAAAATACTTGGAGAAACTGGAGGTACTGAGGGATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS GCA 72 bp CATCTGAGGAGAGATTTGGATCCATCCTTGAGTGCCTaGCAGCAGTGTCAGTGGCCTTCCTTTTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: HLRRDLDPSLSA*QQCQWPSFFCL
Trigger: CAAGCAGAAAAAGGAAGGCCACTGACACTGCTGGCAGGCACTCAAGGATGGATCCAAATCTCTCCTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS CAA 72 bp GCAGCAGTCTTTTGCTGGTTATGCAGCATCAGAAGTTaGATTTCCAAGGTGGCTATGAGACGTCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: AAVFCWLCSIRS*ISKVAMRRLSS
Trigger: AGAGCTGAGACGTCTCATAGCCACCTTGGAAATCAAACTTCTGATGCTGCATAACCAGCAAAAGACTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS CAA 90 bp TTCTCTGTTTTCCTGAAGAACTTTGTTAGGTGGCTCTTCGAATTCTaGGACCAAATCCTGTTTTTCCTTCCTGGCCTGTTGCCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: FSVFLKNFVRWLFEF*DQILFFLPGLLPLC
Trigger: ACAGAGAGGCAACAGGCCAGGAAGGAAAAACAGGATTTGGTCCAAGAATTCGAAGAGCCACCTAACAAAGTTCTTCAGGAAAACAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS CAA 72 bp TTCCTGAAGAACTTTGTTAGGTGGCTCTTCGAATTCTaGGACCAAATCCTGTTTTTCCTTCCTGGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: FLKNFVRWLFEF*DQILFFLPGLL
Trigger: CAACAGGCCAGGAAGGAAAAACAGGATTTGGTCCAAGAATTCGAAGAGCCACCTAACAAAGTTCTTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS CAA 72 bp CTCTCTTCACAGTGGGTTTTCAGAACATCCTTAATTTaGACCTCCATGGCACTGAAAGATGAGGTCATGATC +
Preference number: 6 (lower is better)
Translates to: LSSQWVFRTSLI*TSMALKDEVMI
Trigger: GATCATGACCTCATCTTTCAGTGCCATGGAGGTCAAAATTAAGGATGTTCTGAAAACCCACTGTGAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5
CDS CAA 72 bp CTTCTGAAGAGTGAGACTTTCATGAATAAACTTCTGTaGCTCCATAAACATATTAGAGAGTGTTTCGGCATG +
Preference number: 6 (lower is better)
Translates to: LLKSETFMNKLL*LHKHIRECFGM
Trigger: CATGCCGAAACACTCTCTAATATGTTTATGGAGCAACAGAAGTTTATTCATGAAAGTCTCACTCTTCAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101486.5