Pregenerated sensors for XKR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067813Ensembl transcript IDs: ENSMUST00000088542.4
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGGCTGGGGGTGCAACTCAGTGGTAGAATATTTACATAGCATGTaGAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: DGWGCNSVVEYLHSM*RPDPQQHKEEIILN Trigger: GTTTAAAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAATATTCTACCACTGAGTTGCACCCCCAGCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTCTCTCATTCACCATGTaGCATAACTCATTTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: IYIACAGLILSNTKKKLFLSFTM*HNSFQT Trigger: TGTCTGAAATGAGTTATGGCACATGGTGAATGAGAG...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTCATAAAATATTACTATaGTCTCATTCACCATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IYIACAGLILSNTKKKLFHKILL*SHSPCA Trigger: GGCACATGGTGAATGAGAGCATAGTAATATTTTATG...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| 3UTR CCA 72 bp | CTCAACACTCAAGACTTTTGGAACCAGCGAGATGGCTaGGGGTGCAACTCAGTGGTAGAATATTTACATAGC | + |
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Preference number: 3 (lower is better) Translates to: LNTQDFWNQRDG*GCNSVVEYLHS Trigger: GCTATGTAAATATTCTACCACTGAGTTGCACCCCCAGCCATCTCGCTGGTTCCAAAAGTCTTGAGTGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| 3UTR GCA 72 bp | GGGTGCAACTCAGTGGTAGAATATTTACATAGCATGTaGAGGCCTGATCCTCAGCAACACAAAGAAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: GCNSVVEYLHSM*RPDPQQHKEEI Trigger: AATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAATATTCTACCACTGAGTTGCACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR TCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTCATAGAGCTGGAGAATaGGTTGCGGGCAGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFHRAGE*VAGSLP Trigger: TGGAAGGCTGCCCGCAACTCATTCTCCAGCTCTATG...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR TCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTCCTGTCGCTGTGTTTaGAAACCACATGGTAACCCG | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFSCRCV*KPHGNP Trigger: CGGGTTACCATGTGGTTTTCAAACACAGCGACAGGA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR GCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTGGTGGCCATGTCTATTaGTTCTTTGTGAGGATCCGT | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFGGHVY*FFVRIR Trigger: ACGGATCCTCACAAAGAAGCAATAGACATGGCCACC...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTGCATGCTCAAGTCGGTaGCCATGTCTATTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFACSSR*PCLLLL Trigger: AAGAAGCAATAGACATGGCCACCGACTTGAGCATGC...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR TCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTCAAACCAATACCTTGTaGAAACTCCTCCTTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFQTNTL*KLLLAS Trigger: GCTTGCAAGGAGGAGTTTTCACAAGGTATTGGTTTG...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR TCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTGTAAAAGAGATACATaGGTTTGGGCCAGAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFCKRDT*VWARVL Trigger: GAGGACTCTGGCCCAAACTCATGTATCTCTTTTACA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR TCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTTGATAGTCAACAGTTaGCCAAGAAATAGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFLIVNS*PRNSTA Trigger: TGCTGTGCTATTTCTTGGTCAACTGTTGACTATCAA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR GCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTACAATCTCTCTGAGGTaGTTTTCCATCAGTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFTISLR*FSISFI Trigger: GATGAAACTGATGGAAAAGCACCTCAGAGAGATTGT...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTACATATTGTCCATCATaGAAGTACCTAACAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFTYCPS*KYLTDR Trigger: CCTATCTGTTAGGTACTTCCATGATGGACAATATGT...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CCA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTATAATAACAAGACATTaGGCATTTGGTATTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IYIACAGLILSNTKKKLFIITRH*AFGILP Trigger: GGGCAGAATACCAAATGCCCAATGTCTTGTTATTAT...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS TCA 90 bp | AGCCTGAGCATGCTCAAGTCGGTGGCCATGTCTATTGCTTCTTTGTaGGGATCCGTTTGCTCCTCCATAAAATTACTCTTCCTGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLSMLKSVAMSIASL*GSVCSSIKLLFLSL Trigger: CAGCGACAGGAAGAGTAATTTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACCGACTTGAGCATGCTCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS GCA 90 bp | GGTCTCAAACAGCCTGAGCATGCTCAAGTCGGTGGCCATGTCTATTaGTTCTTTGTGAGGATCCGTTTGCTCCTCCATAAAATTACTCTT | + |
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Preference number: 5 (lower is better) Translates to: GLKQPEHAQVGGHVY*FFVRIRLLLHKITL Trigger: AAGAGTAATTTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACCGACTTGAGCATGCTCAGGCTGTTTGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTGAGCTGGAGAATGAGTaGCGGGCAGCCTTCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFELENE*RAAFQV Trigger: TACCTGGAAGGCTGCCCGCAACTCATTCTCCAGCTC...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTGCACTGACTTAAATTaGCCTGGCCACACTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFCTDLN*PGHTPE Trigger: TTCTGGAGTGTGGCCAGGCAAATTTAAGTCAGTGCA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTCAAGACATTGGGCATTaGGTATTCTGCCCCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFQDIGH*VFCPLI Trigger: TATCAAGGGGCAGAATACCAAATGCCCAATGTCTTG...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTAACACCAAGAACATATaGTCCATCATGGAAGTACCT | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFNTKNI*SIMEVP Trigger: AGGTACTTCCATGATGGACAATATGTTCTTGGTGTT...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTTTGTGAGGATCCGTTaGCTCCTCCATAAAATTACT | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFFVRIR*LLHKIT Trigger: AGTAATTTTATGGAGGAGCAAACGGATCCTCACAAA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS-3UTR CAA 90 bp | ATTTACATAGCATGTGCAGGCCTGATCCTCAGCAACACAAAGAAGAAATTATTTTATAATAACAAGACATaGGGCATTTGGTATTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: IYIACAGLILSNTKKKLFYNNKT*GIWYSA Trigger: GGCAGAATACCAAATGCCCAATGTCTTGTTATTATA...AAATAATTTCTTCTTTGTGTTGCTGAGGATCAGGCCTGCACATGCTATGTAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS TCA 72 bp | GTTGCGGGCAGCCTTCCAGGTAGGTCTCAAACAGCCTaGGCATGCTCAAGTCGGTGGCCATGTCTATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VAGSLPGRSQTA*ACSSRWPCLLL Trigger: AAGCAATAGACATGGCCACCGACTTGAGCATGCTCAGGCTGTTTGAGACCTACCTGGAAGGCTGCCCGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS TCA 72 bp | CCTGGCCACACTCCAGAAAGGCATAGAGCTGGAGAATaGGTTGCGGGCAGCCTTCCAGGTAGGTCTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: PGHTPERHRAGE*VAGSLPGRSQT Trigger: TGTTTGAGACCTACCTGGAAGGCTGCCCGCAACTCATTCTCCAGCTCTATGCCTTTCTGGAGTGTGGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS CAA 90 bp | ATTTGCCTGGCCACACTCCAGAAAGGCATAGAGCTGGAGAATGAGTaGCGGGCAGCCTTCCAGGTAGGTCTCAAACAGCCTGAGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: ICLATLQKGIELENE*RAAFQVGLKQPEHA Trigger: AGCATGCTCAGGCTGTTTGAGACCTACCTGGAAGGCTGCCCGCAACTCATTCTCCAGCTCTATGCCTTTCTGGAGTGTGGCCAGGCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS GCA 72 bp | CAGCCTGAGCATGCTCAAGTCGGTGGCCATGTCTATTaGTTCTTTGTGAGGATCCGTTTGCTCCTCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: QPEHAQVGGHVY*FFVRIRLLLHK Trigger: TTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACCGACTTGAGCATGCTCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS TCA 72 bp | GAAATAGCACAGCAGGAAACCATGATGACCATGCACTaGCTTAAATTTGCCTGGCCACACTCCAGAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: EIAQQETMMTMH*LKFAWPHSRKA Trigger: TGCCTTTCTGGAGTGTGGCCAGGCAAATTTAAGTCAGTGCATGGTCATCATGGTTTCCTGCTGTGCTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS CAA 72 bp | GGTGGCCATGTCTATTGCTTCTTTGTGAGGATCCGTTaGCTCCTCCATAAAATTACTCTTCCTGTCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GGHVYCFFVRIR*LLHKITLPVAV Trigger: CACAGCGACAGGAAGAGTAATTTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS CAA 90 bp | GCTCAAGTCGGTGGCCATGTCTATTGCTTCTTTGTGAGGATCCGTTaGCTCCTCCATAAAATTACTCTTCCTGTCGCTGTGTTTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: AQVGGHVYCFFVRIR*LLHKITLPVAVFEN Trigger: GTTTTCAAACACAGCGACAGGAAGAGTAATTTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACCGACTTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS TCA 72 bp | ATGCTCAAGTCGGTGGCCATGTCTATTGCTTCTTTGTaGGGATCCGTTTGCTCCTCCATAAAATTACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MLKSVAMSIASL*GSVCSSIKLLF Trigger: GAAGAGTAATTTTATGGAGGAGCAAACGGATCCTCACAAAGAAGCAATAGACATGGCCACCGACTTGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS CCA 72 bp | CTCAAGGTTAAAACACCAAGAACATATTGTCCATCATaGAAGTACCTAACAGATAGGACAATGTCTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: LKVKTPRTYCPS*KYLTDRTMSAT Trigger: AGTTGCAGACATTGTCCTATCTGTTAGGTACTTCCATGATGGACAATATGTTCTTGGTGTTTTAACCTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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| CDS CCA 72 bp | TCTCTGAGGTGCTTTTCCATCAGTTTCATCAAGTTGTaGTTCTACATTTCTATTTGGGTGAAAATTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: SLRCFSISFIKL*FYISIWVKISI Trigger: TATGGAAATTTTCACCCAAATAGAAATGTAGAACCACAACTTGATGAAACTGATGGAAAAGCACCTCAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088542.4 |
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