Pregenerated sensors for XKR8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037752Ensembl transcript IDs: ENSMUST00000045550.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTACCTTCTCCCAGAGCCTCTTCCAGGCCCCCACCTGCATCTCTaGAGCCTCCTTGGCTGTGAGCCAACCGCACCCCACAGTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KYLLPEPLPGPHLHL*SLLGCEPTAPHSPL Trigger: AAGAGGACTGTGGGGTGCGGTTGGCTCACAGCCAAGGAGGCTGCAGAGATGCAGGTGGGGGCCTGGAAGAGGCTCTGGGAGAAGGTACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 90 bp | AGTATAAGAAGTACCTTCTCCCAGAGCCTCTTCCAGGCCCCCACCTaGATCTCTGCAGCCTCCTTGGCTGTGAGCCAACCGCACCCCACA | + |
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Preference number: 1 (lower is better) Translates to: SIRSTFSQSLFQAPT*ISAASLAVSQPHPT Trigger: TGTGGGGTGCGGTTGGCTCACAGCCAAGGAGGCTGCAGAGATGCAGGTGGGGGCCTGGAAGAGGCTCTGGGAGAAGGTACTTCTTATACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 90 bp | CCCGGGGTTCCTTGCCCTCACAACCTAAAAGTCCCGCCTCTTTCCTaGCCAGCCAGCCCTGGGCAACTTTATTTCCCAATCACAGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PGVPCPHNLKVPPLS*PASPGQLYFPITAN Trigger: GTTGGCTGTGATTGGGAAATAAAGTTGCCCAGGGCTGGCTGGGCAGGAAAGAGGCGGGACTTTTAGGTTGTGAGGGCAAGGAACCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 90 bp | GGGCTAGGGAACCAGGAGCCAGGACGCCACCAATCACCTGAGAGGTaGGAACAACAAACAACCGAGTGTTTGCTGACAGCAGTTCCATCG | + |
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Preference number: 1 (lower is better) Translates to: GLGNQEPGRHQSPER*EQQTTECLLTAVPS Trigger: CGATGGAACTGCTGTCAGCAAACACTCGGTTGTTTGTTGTTCTCACCTCTCAGGTGATTGGTGGCGTCCTGGCTCCTGGTTCCCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 90 bp | TGGTATAAAGGTGGCCTGAGCATCAGGACACTGGAGGGACATACCTaGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: WYKGGLSIRTLEGHT*PHCLGVYPGSVQVG Trigger: GCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTATGTCCCTCCAGTGTCCTGATGCTCAGGCCACCTTTATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 90 bp | AGTCTACCCAGGATCTGTCCAGGTGGGCAGGGAAAGAAGCTAGAGTaGCAGGCAGTTCAGAAGCCAGGATGGTGTTCCCAGAACATAAAG | + |
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Preference number: 1 (lower is better) Translates to: SLPRICPGGQGKKLE*QAVQKPGWCSQNIK Trigger: CTTTATGTTCTGGGAACACCATCCTGGCTTCTGAACTGCCTGCCACTCTAGCTTCTTTCCCTGCCCACCTGGACAGATCCTGGGTAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 90 bp | CTAACCTCCCTGAGTCGACTTGCTAAGTCATCATTTCATCTCTGCTaGCCCAGACCCAACTGCGCAGTGAAATCCCTCTGCTTCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: LTSLSRLAKSSFHLC*PRPNCAVKSLCFQL Trigger: GAGTTGGAAGCAGAGGGATTTCACTGCGCAGTTGGGTCTGGGGCAGCAGAGATGAAATGATGACTTAGCAAGTCGACTCAGGGAGGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 90 bp | AGTTCTGCTAGCCGAATGATCAACCGGCTCGGGCTCACTAGCCCCTaGGTCTTGGGAAGCAAAATTAAGTCAAACCTATGCCCACATTTG | + |
|
Preference number: 1 (lower is better) Translates to: SSASRMINRLGLTSP*VLGSKIKSNLCPHL Trigger: CAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAGTGAGCCCGAGCCGGTTGATCATTCGGCTAGCAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 90 bp | GGTGCTTGTTTGGGTCACAGGTTATTTCACGTCCACACAAATAAATaGATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GACLGHRLFHVHTNK*MTARTIWVPALGPG Trigger: TCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCATTCATTTATTTGTGTGGACGTGAAATAACCTGTGACCCAAACAAGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 90 bp | AGGATGGTGTTCCCAGAACATAAAGTGCCTTTAGCATTTGTTGGTTaGAGTGAATGGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: RMVFPEHKVPLAFVG*SEWMGWGREEFSQN Trigger: ATTCTGGGAGAACTCTTCCCTACCCCATCCCATCCATTCACTTCAACCAACAAATGCTAAAGGCACTTTATGTTCTGGGAACACCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 90 bp | CTTGGCTGTGAGCCAACCGCACCCCACAGTCCTCTTACAGTGGGGTaGCTGTGCCACAGGGAACAGCATTCGCAGATTCCTTCTCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LGCEPTAPHSPLTVG*LCHREQHSQIPSPT Trigger: TGTTGGAGAAGGAATCTGCGAATGCTGTTCCCTGTGGCACAGCAACCCCACTGTAAGAGGACTGTGGGGTGCGGTTGGCTCACAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 90 bp | GAAGTGAATGGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTaGTGTCATCTAGAGCGGGCTAGGGAACCAGGAGCCAGGACGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EVNGWDGVGKSSPRI*CHLERAREPGARTP Trigger: TGGCGTCCTGGCTCCTGGTTCCCTAGCCCGCTCTAGATGACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCCATTCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCTGCTAGGTATAAAGGTGGCCTaGGCATCAGGACACTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QTCHPHPQVLFRLSTELLGIKVA*ASGHWR Trigger: CCTCCAGTGTCCTGATGCTCAGGCCACCTTTATACC...TAGCAGCTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGGGTCCTCTCAGACCAGATTGTGTGTCACAAAACAAGAGCAGGGTAGTACCCCACCTGCATCTCTaGAGCCTCCTTGGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AQGPLRPDCVSQNKSRVVPHLHL*SLLGCE Trigger: CTCACAGCCAAGGAGGCTGCAGAGATGCAGGTGGGG...TACTACCCTGCTCTTGTTTTGTGACACACAATCTGGTCTGAGAGGACCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTCAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGAGTGAATGGATGGGATaGGGTAGGGAAGAGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: APQTCHPHPQVLFRLSTESEWMG*GREEFS Trigger: GGAGAACTCTTCCCTACCCCATCCCATCCATTCACT...CTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 90 bp | GCTAGCCGAATGATCAACCGGCTCGGGCTCACTAGCCCCTGCGTCTaGGGAAGCAAAATTAAGTCAAACCTATGCCCACATTTGTATGCC | + |
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Preference number: 2 (lower is better) Translates to: ASRMINRLGLTSPCV*GSKIKSNLCPHLYA Trigger: GGCATACAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAGTGAGCCCGAGCCGGTTGATCATTCGGCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAGTGAATGGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTTGTGTAAAATGGCTTGCACATaGCTGGCCCGCCTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VEVNGWDGVGKSSPRILCKMACT*LARLVP Trigger: AGGGACAAGGCGGGCCAGTCATGTGCAAGCCATTTT...ACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCCATTCACTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CCA 90 bp | CAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCTGCTAGTTGAAGTGAATGGATaGGATGGGGTAGGGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QTCHPHPQVLFRLSTELLVEVNG*DGVGKS Trigger: ACTCTTCCCTACCCCATCCCATCCATTCACTTCAAC...TAGCAGCTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGTCGAGTGTGCTGAACGTTACCAAGGAGGAGTCAGTCTGTGCTGAGCATTCTCACCTCTCCATCTaGTTTTCTTTCAGTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: ELSSVLNVTKEESVCAEHSHLSI*FSFSTW Trigger: CCAAGTACTGAAAGAAAACCAGATGGAGAGGTGAGA...ATGCTCAGCACAGACTGACTCCTCCTTGGTAACGTTCAGCACACTCGACAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGCTGCAACTTCCACCCACAACATACATCCTCCCTCTCACCTCTCCATCTCTAGCCCCTGCGTCTTaGGAAGCAAAATTAAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: IKLQLPPTTYILPLTSPSLAPAS*EAKLSQ Trigger: TTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAG...AGATGGAGAGGTGAGAGGGAGGATGTATGTTGTGGGTGGAAGTTGCAGCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 90 bp | CATACATCCTCCCTCTCACCTCTCCATCTGGTTTTCTTTCAGTACTaGGTGCTTGTTTGGGTCACAGGTTATTTCACGTCCACACAAATA | + |
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Preference number: 2 (lower is better) Translates to: HTSSLSPLHLVFFQY*VLVWVTGYFTSTQI Trigger: TATTTGTGTGGACGTGAAATAACCTGTGACCCAAACAAGCACCAAGTACTGAAAGAAAACCAGATGGAGAGGTGAGAGGGAGGATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCCCTGCGTCTTGGGAAGCAAAATTAAGTCAAACCTATGCCCACATTTGTCTTAGTGGTACATACTaGTCTGGAGAATCTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: LAPASWEAKLSQTYAHICLSGTY*SGESHE Trigger: CTCATGAGATTCTCCAGACCAGTATGTACCACTAAG...ACAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | AGGCCCCCACCTGCATCTCTGCAGCCTCCTTGGCTGTaGGCCAACCGCACCCCACAGTCCTCTTACAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RPPPASLQPPWL*ANRTPQSSYSG Trigger: CCCACTGTAAGAGGACTGTGGGGTGCGGTTGGCTCACAGCCAAGGAGGCTGCAGAGATGCAGGTGGGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | AGTACCTTCTCCCAGAGCCTCTTCCAGGCCCCCACCTaGATCTCTGCAGCCTCCTTGGCTGTGAGCCAACCG | + |
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Preference number: 3 (lower is better) Translates to: STFSQSLFQAPT*ISAASLAVSQP Trigger: CGGTTGGCTCACAGCCAAGGAGGCTGCAGAGATGCAGGTGGGGGCCTGGAAGAGGCTCTGGGAGAAGGTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | AGGATCTGTCCAGGTGGGCAGGGAAAGAAGCTAGAGTaGCAGGCAGTTCAGAAGCCAGGATGGTGTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RICPGGQGKKLE*QAVQKPGWCSQ Trigger: CTGGGAACACCATCCTGGCTTCTGAACTGCCTGCCACTCTAGCTTCTTTCCCTGCCCACCTGGACAGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | GGTGGCCTGAGCATCAGGACACTGGAGGGACATACCTaGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GGLSIRTLEGHT*PHCLGVYPGSV Trigger: GACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTATGTCCCTCCAGTGTCCTGATGCTCAGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | CCACAGGTCCATAAGGCACTTGGTATAAAGGTGGCCTaGGCATCAGGACACTGGAGGGACATACCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PQVHKALGIKVA*ASGHWRDIPGL Trigger: GAGGCCAGGTATGTCCCTCCAGTGTCCTGATGCTCAGGCCACCTTTATACCAAGTGCCTTATGGACCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | AAGTCATCATTTCATCTCTGCTGCCCCAGACCCAACTaGGCAGTGAAATCCCTCTGCTTCCAACTCCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: KSSFHLCCPRPN*AVKSLCFQLPG Trigger: CCCGGGGAGTTGGAAGCAGAGGGATTTCACTGCGCAGTTGGGTCTGGGGCAGCAGAGATGAAATGATGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | GCTAGGGAACCAGGAGCCAGGACGCCACCAATCACCTaGGAGGTGAGAACAACAAACAACCGAGTGTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: AREPGARTPPIT*EVRTTNNRVFA Trigger: AGCAAACACTCGGTTGTTTGTTGTTCTCACCTCTCAGGTGATTGGTGGCGTCCTGGCTCCTGGTTCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | AACCAGGAGCCAGGACGCCACCAATCACCTGAGAGGTaGGAACAACAAACAACCGAGTGTTTGCTGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: NQEPGRHQSPER*EQQTTECLLTA Trigger: TGCTGTCAGCAAACACTCGGTTGTTTGTTGTTCTCACCTCTCAGGTGATTGGTGGCGTCCTGGCTCCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | AGCCGAATGATCAACCGGCTCGGGCTCACTAGCCCCTaGGTCTTGGGAAGCAAAATTAAGTCAAACCTATGC | + |
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Preference number: 3 (lower is better) Translates to: SRMINRLGLTSP*VLGSKIKSNLC Trigger: GCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAGTGAGCCCGAGCCGGTTGATCATTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | CTGAGTCGACTTGCTAAGTCATCATTTCATCTCTGCTaGCCCAGACCCAACTGCGCAGTGAAATCCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSRLAKSSFHLC*PRPNCAVKSLC Trigger: GCAGAGGGATTTCACTGCGCAGTTGGGTCTGGGGCAGCAGAGATGAAATGATGACTTAGCAAGTCGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR-3UTR CAA 90 bp | CAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCTGCTAACTAGCCCCTGCGTCTaGGGAAGCAAAATTAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: QTCHPHPQVLFRLSTELLTSPCV*GSKIKS Trigger: TGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAGT...TAGCAGCTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | CCTGACTCCCGGCTGGCCAAGTGTTCCCGGGATTTGTaGATGAGAGACACACACCATCTAACTTTGATATGC | + |
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Preference number: 3 (lower is better) Translates to: PDSRLAKCSRDL*MRDTHHLTLIC Trigger: GCATATCAAAGTTAGATGGTGTGTGTCTCTCATTCACAAATCCCGGGAACACTTGGCCAGCCGGGAGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | CATTTTGTTGGAGACAGGGTCTCATGTAGCCCAAGCTaGCCTCTGACATTGTCACTGAGGAGTCTGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: HFVGDRVSCSPS*PLTLSLRSLNS Trigger: GGAGTTCAGACTCCTCAGTGACAATGTCAGAGGCCAGCTTGGGCTACATGAGACCCTGTCTCCAACAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | CCCTGCTCAGTCACAAGTGCAGATTCTAGTGTTGGCTaGTTTCCAAACCCTGTAGTGCTTAGACCCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: PCSVTSADSSVG*FPNPVVLRPLT Trigger: AGTCAGGGGTCTAAGCACTACAGGGTTTGGAAACCAGCCAACACTAGAATCTGCACTTGTGACTGAGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | CAACAAACCACGCAGACTCCATGCTGCAGTCACTGCTaGAGTAGCTTACAGTCTATGCCTCAGTTTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QQTTQTPCCSHC*SSLQSMPQFLR Trigger: TCTGAGAAACTGAGGCATAGACTGTAAGCTACTTCAGCAGTGACTGCAGCATGGAGTCTGCGTGGTTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | AATGAGAGACACACACCATCTAACTTTGATATGCTCTaGCTAGCTCAGTGGCTGGACGTGTCTAACCCTCCG | + |
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Preference number: 3 (lower is better) Translates to: NERHTPSNFDML*LAQWLDVSNPP Trigger: CGGAGGGTTAGACACGTCCAGCCACTGAGCTAGTCAGAGCATATCAAAGTTAGATGGTGTGTGTCTCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | ACCAGGTGTTCTACATTCTGCCACATTTGGTCTGATTaGCCCCCACTAGCTTACAAGAGGGCTTTTTACCCA | + |
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Preference number: 3 (lower is better) Translates to: TRCSTFCHIWSD*PPLAYKRAFYP Trigger: TGGGTAAAAAGCCCTCTTGTAAGCTAGTGGGGGCCAATCAGACCAAATGTGGCAGAATGTAGAACACCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | ACCAACCAGGTGTTCTACATTCTGCCACATTTGGTCTaGTTGGCCCCCACTAGCTTACAAGAGGGCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: TNQVFYILPHLV*LAPTSLQEGFL Trigger: TAAAAAGCCCTCTTGTAAGCTAGTGGGGGCCAATCAGACCAAATGTGGCAGAATGTAGAACACCTGGTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | CCCTGCGTCTTGGGAAGCAAAATTAAGTCAAACCTATaGCCACATTTGTATGCCAGGGGTCTGTGTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: PCVLGSKIKSNL*PHLYARGLCQF Trigger: AAACTGACACAGACCCCTGGCATACAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CCA 72 bp | CCCTCTCACCTCTCCATCTGGTTTTCTTTCAGTACTTaGTGCTTGTTTGGGTCACAGGTTATTTCACGTCCA | + |
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Preference number: 3 (lower is better) Translates to: PSHLSIWFSFST*CLFGSQVISRP Trigger: TGGACGTGAAATAACCTGTGACCCAAACAAGCACCAAGTACTGAAAGAAAACCAGATGGAGAGGTGAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR GCA 72 bp | TCTCACCTCTCCATCTGGTTTTCTTTCAGTACTTGGTaGTTGTTTGGGTCACAGGTTATTTCACGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: SHLSIWFSFSTW*LFGSQVISRPH Trigger: GTGTGGACGTGAAATAACCTGTGACCCAAACAAGCACCAAGTACTGAAAGAAAACCAGATGGAGAGGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | TTCCCAGAACATAAAGTGCCTTTAGCATTTGTTGGTTaGAGTGAATGGATGGGATGGGGTAGGGAAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: FPEHKVPLAFVG*SEWMGWGREEF Trigger: GAACTCTTCCCTACCCCATCCCATCCATTCACTTCAACCAACAAATGCTAAAGGCACTTTATGTTCTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR TCA 72 bp | CTAGCTTACAAGAGGGCTTTTTACCCATTGTTCCAGTaGAGGAAATTAGAAGTTGTTTCTAGCTTCCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: LAYKRAFYPLFQ*RKLEVVSSFQR Trigger: CCTTTGGAAGCTAGAAACAACTTCTAATTTCCTTCACTGGAACAATGGGTAAAAAGCCCTCTTGTAAGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | TACCTGGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGCAGGGAGGCCCAGGCGTGGCTTaGAGGGAAGACAGGTACGCA | + |
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Preference number: 4 (lower is better) Translates to: YLASLFRSLPRICPGGQGGPGVA*REDRYA Trigger: TGCGTACCTGTCTTCCCTCCAAGCCACGCCTGGGCC...TCCCTGCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | TACCTGGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGCAGGGACACCAGTGTGAGCTGTaGCGTCGCCTCCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: YLASLFRSLPRICPGGQGHQCEL*RRLQEA Trigger: AGCTTCCTGGAGGCGACGCCACAGCTCACACTGGTG...TCCCTGCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | GCCCCTCAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCGATGGCACAGATTCTaGGCCCCAGCAGCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: APQTCHPHPQVLFRLSTERWHRF*APAAAG Trigger: ACCTGCTGCTGCTGGGGCCCAGAATCTGTGCCATCG...CTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 72 bp | GAGCCAACCGCACCCCACAGTCCTCTTACAGTGGGGTaGCTGTGCCACAGGGAACAGCATTCGCAGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: EPTAPHSPLTVG*LCHREQHSQIP Trigger: AGGAATCTGCGAATGCTGTTCCCTGTGGCACAGCAACCCCACTGTAAGAGGACTGTGGGGTGCGGTTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | GGAACCAGGAGCCAGGACGCCACCAATCACCTGAGAGGTGAGAACAACAAACAACCGAGCTGCAGCAGGTaGAGCAGAGCCAGGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GTRSQDATNHLRGENNKQPSCSR*SRARKG Trigger: TCCTTTCCTGGCTCTGCTGCACCTGCTGCAGCTCGG...TTGTTTGTTGTTCTCACCTCTCAGGTGATTGGTGGCGTCCTGGCTCCTGGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | ATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTCACTGGGCAGCCAGGTaGCGTGTGTCACCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: MTARTIWVPALGPGTFSSHWAAR*RVSPRR Trigger: CCTCCTGGGTGACACACGGCACCTGGCTGCCCAGTG...AGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | TACCTGGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGCAGGGAAATGGTGCAGCTCGGTaGGATCAGCTGTCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YLASLFRSLPRICPGGQGNGAAR*DQLSAR Trigger: TCTGGCTGACAGCTGATCCCACCGAGCTGCACCATT...TCCCTGCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | CAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCTGCTACGCGAGAGCTGCGAATaGTGCAGCTCGGTGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: QTCHPHPQVLFRLSTELLRESCE*CSSVGS Trigger: TGATCCCACCGAGCTGCACCATTCGCAGCTCTCGCG...TAGCAGCTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 72 bp | GGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTaGTGTCATCTAGAGCGGGCTAGGGAACCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GWDGVGKSSPRI*CHLERAREPGA Trigger: GGCTCCTGGTTCCCTAGCCCGCTCTAGATGACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | ATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTACTCCGGCCCAGGCGTaGCTTGGAGGGAAGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: MTARTIWVPALGPGTFSSTPAQA*LGGKTG Trigger: ACCTGTCTTCCCTCCAAGCCACGCCTGGGCCGGAGT...AGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | GCTCAGGGTCCTCTCAGACCAGATTGTGTGTCACAAAACAAGAGCAGGGTAGTAAGCAGCACCGAAGCTTaGCCCAGCAGGACCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: AQGPLRPDCVSQNKSRVVSSTEA*PSRTST Trigger: GGTACTGGTCCTGCTGGGCCAAGCTTCGGTGCTGCT...TACTACCCTGCTCTTGTTTTGTGACACACAATCTGGTCTGAGAGGACCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | GCCCCTCAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGTCTCCTGGTAGCACATaGACAGCCCTTGATGCATTC | + |
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Preference number: 4 (lower is better) Translates to: APQTCHPHPQVLFRLSTESPGST*TALDAF Trigger: GAATGCATCAAGGGCTGTCCATGTGCTACCAGGAGA...CTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | ATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTGCAATGAGATCCCACTaGGCAGCCAGGTGCCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: MTARTIWVPALGPGTFSSAMRSH*AARCRV Trigger: CACACGGCACCTGGCTGCCCAGTGGGATCTCATTGC...AGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | GCCCCTCAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGAAAGCTTCAGCATGCTaGTGTCCAGGGAGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APQTCHPHPQVLFRLSTEKASAC*CPGRES Trigger: ACTTTCTCTCCCTGGACATCAGCATGCTGAAGCTTT...CTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTGAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | TACCTGGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGCAGGGACAAGAAAGGATGAGCTaGTGCCAAACCACTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YLASLFRSLPRICPGGQGQERMS*CQTTGS Trigger: ACTACCAGTGGTTTGGCATCAGCTCATCCTTTCTTG...TCCCTGCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | CAAACCTGCCATCCCCATCCTCAAGTCCTCTTTAGGCTCAGTACGGAGCTGCTAAGGAGAAATAGAGGATaGGGGCCATTGTCACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTCHPHPQVLFRLSTELLRRNRG*GPLSPG Trigger: ACCGGGTGACAATGGCCCTCATCCTCTATTTCTCCT...TAGCAGCTCCGTACTGAGCCTAAAGAGGACTTGAGGATGGGGATGGCAGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | ATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTTCACCCAGGAGGTGGTaGCCAGCAGAACACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MTARTIWVPALGPGTFSSSPRRW*PAEHCH Trigger: GTGACAGTGTTCTGCTGGTCACCACCTCCTGGGTGA...AGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | GGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTTGTGTCATCTAGAGCGGAGGACTCCATTCAGCTaGACCTCCTCTGTCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GWDGVGKSSPRILCHLERRTPFS*TSSVRT Trigger: TGTCCTGACAGAGGAGGTGCAGCTGAATGGAGTCCT...CCGCTCTAGATGACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 72 bp | GACATTGTCACTGAGGAGTCTGAACTCCTGATGTCCTaGCCCAGACTGGTAGGTGTGTCACACTGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: DIVTEESELLMS*PRLVGVSHWLI Trigger: GATGAGCCAGTGTGACACACCTACCAGTCTGGGCAAGGACATCAGGAGTTCAGACTCCTCAGTGACAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | GAGCTGTCGAGTGTGCTGAACGTTACCAAGGAGGAGTCAGTCTGTGCTGAGCATGATGCCAAGAAAGGATaGGCTGATGCCAAACCACTG | + |
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Preference number: 4 (lower is better) Translates to: ELSSVLNVTKEESVCAEHDAKKG*ADAKPL Trigger: CAGTGGTTTGGCATCAGCTCATCCTTTCTTGGCATC...ATGCTCAGCACAGACTGACTCCTCCTTGGTAACGTTCAGCACACTCGACAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | CTAGCCCCTGCGTCTTGGGAAGCAAAATTAAGTCAAACCTATGCCCACATTTGTCACCCACATCAGCAATaGGATCCCACTGGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LAPASWEAKLSQTYAHICHPHQQ*DPTGQP Trigger: TGGCTGCCCAGTGGGATCTCATTGCTGATGTGGGTG...ACAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | CTAGCCCCTGCGTCTTGGGAAGCAAAATTAAGTCAAACCTATGCCCACATTTGTAGCCAGCTGAAGAGCTaGAGCAGCACCGAAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LAPASWEAKLSQTYAHICSQLKS*SSTEAW Trigger: CCAAGCTTCGGTGCTGCTGCAGCTCTTCAGCTGGCT...ACAAATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | GCTCAGGGTCCTCTCAGACCAGATTGTGTGTCACAAAACAAGAGCAGGGTAGTATCCGCCTGGCCATTCTaGAATACAATTGCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: AQGPLRPDCVSQNKSRVVSAWPF*NTIAST Trigger: GGTGCTGGCAATTGTATTGCAGAATGGCCAGGCGGA...TACTACCCTGCTCTTGTTTTGTGACACACAATCTGGTCTGAGAGGACCCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | GTTGAAGTGAATGGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTTGTGTAAGATGAAGATCAGGTaGATGACGGCCCGGCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: VEVNGWDGVGKSSPRILCKMKIR*MTARPR Trigger: TCGAGGCCGGGCCGTCATCCACCTGATCTTCATCTT...ACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCCATTCACTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| 3UTR CAA 72 bp | ATGATCAACCGGCTCGGGCTCACTAGCCCCTGCGTCTaGGGAAGCAAAATTAAGTCAAACCTATGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: MINRLGLTSPCV*GSKIKSNLCPH Trigger: ATGTGGGCATAGGTTTGACTTAATTTTGCTTCCCAAGACGCAGGGGCTAGTGAGCCCGAGCCGGTTGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CCA 90 bp | GTTGAAGTGAATGGATGGGATGGGGTAGGGAAGAGTTCTCCCAGAATCTTGTGTCAGGTCACACTCGGATaGCATCTCCTGGTAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VEVNGWDGVGKSSPRILCQVTLG*HLLVAH Trigger: ATGTGCTACCAGGAGATGCCATCCGAGTGTGACCTG...ACACAAGATTCTGGGAGAACTCTTCCCTACCCCATCCCATCCATTCACTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR TCA 90 bp | TACCTGGCCTCACTGTTTAGGAGTCTACCCAGGATCTGTCCAGGTGGGCAGGGAATAAAATTTGTGCCTTaGAGCCAGATCCAGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLASLFRSLPRICPGGQGIKFVP*SQIQNK Trigger: TTTGTTCTGGATCTGGCTTCAAGGCACAAATTTTAT...TCCCTGCCCACCTGGACAGATCCTGGGTAGACTCCTAAACAGTGAGGCCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR GCA 90 bp | ATGACTGCTAGAACTATCTGGGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTATTCTGCAATACAATTaGCAGCACCAGTGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MTARTIWVPALGPGTFSSILQYN*QHQCEL Trigger: CAGCTCACACTGGTGCTGGCAATTGTATTGCAGAAT...AGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACCCAGATAGTTCTAGCAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CAA 90 bp | GGTCCCAGCACTGGGACCTGGAACCTTTTCTTCTGCCCCTGGAGCCTCTCTCCTCGGCCCAGGCGTGGCTaGGAGGGAAGACAGGTACGC | + |
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Preference number: 5 (lower is better) Translates to: GPSTGTWNLFFCPWSLSPRPRRG*EGRQVR Trigger: GCGTACCTGTCTTCCCTCCAAGCCACGCCTGGGCCG...AGGAGAGAGGCTCCAGGGGCAGAAGAAAAGGTTCCAGGTCCCAGTGCTGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS TCA 90 bp | GCGAATGGTGCAGCTCGGTGGGATCAGCTGTCAGCCAGAGCCAGCTaGAGAGCTGCAGCAGCACCGAAGCTTGGCCCAGCAGGACCAGTA | + |
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Preference number: 5 (lower is better) Translates to: ANGAARWDQLSARAS*RAAAAPKLGPAGPV Trigger: TACTGGTCCTGCTGGGCCAAGCTTCGGTGCTGCTGCAGCTCTTCAGCTGGCTCTGGCTGACAGCTGATCCCACCGAGCTGCACCATTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS TCA 90 bp | GCTGTGGCGTCGCCTCCAGGAAGCTCTCGAAAAGCTTCAGCATGCTaGTGTCCAGGGAGAGAAAGTCTGCGTAGGCCAGGTCACACTCGG | + |
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Preference number: 5 (lower is better) Translates to: AVASPPGSSRKASAC*CPGRESLRRPGHTR Trigger: CCGAGTGTGACCTGGCCTACGCAGACTTTCTCTCCCTGGACATCAGCATGCTGAAGCTTTTCGAGAGCTTCCTGGAGGCGACGCCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS-3UTR CAA 90 bp | ATAAAGCTGCAACTTCCACCCACAACATACATCCTCCCTCTCACCTCTCCATCTCAGCAGCACCGAAGCTaGGCCCAGCAGGACCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IKLQLPPTTYILPLTSPSQQHRS*AQQDQY Trigger: GTACTGGTCCTGCTGGGCCAAGCTTCGGTGCTGCTG...AGATGGAGAGGTGAGAGGGAGGATGTATGTTGTGGGTGGAAGTTGCAGCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS GCA 72 bp | AGCAGAGCCAGGAAAGGACGCGAGAGCTGCGAATGGTaGAGCTCGGTGGGATCAGCTGTCAGCCAGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRARKGRESCEW*SSVGSAVSQSQ Trigger: CTGGCTCTGGCTGACAGCTGATCCCACCGAGCTGCACCATTCGCAGCTCTCGCGTCCTTTCCTGGCTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS GCA 72 bp | AGCAGGTGCAGCAGAGCCAGGAAAGGACGCGAGAGCTaGGAATGGTGCAGCTCGGTGGGATCAGCTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRCSRARKGRES*EWCSSVGSAVS Trigger: GCTGACAGCTGATCCCACCGAGCTGCACCATTCGCAGCTCTCGCGTCCTTTCCTGGCTCTGCTGCACCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS CCA 72 bp | CTCCTATTGTCACCCACATCAGCAATGAGATCCCACTaGGCAGCCAGGTGCCGTGTGTCACCCAGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSPTSAMRSH*AARCRVSPRRW Trigger: CCACCTCCTGGGTGACACACGGCACCTGGCTGCCCAGTGGGATCTCATTGCTGATGTGGGTGACAATAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS CCA 72 bp | GGAGAGAAAGTCTGCGTAGGCCAGGTCACACTCGGATaGCATCTCCTGGTAGCACATGGACAGCCCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GEKVCVGQVTLG*HLLVAHGQPLM Trigger: CATCAAGGGCTGTCCATGTGCTACCAGGAGATGCCATCCGAGTGTGACCTGGCCTACGCAGACTTTCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS TCA 72 bp | TCGCCTCCAGGAAGCTCTCGAAAAGCTTCAGCATGCTaGTGTCCAGGGAGAGAAAGTCTGCGTAGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPPGSSRKASAC*CPGRESLRRPG Trigger: ACCTGGCCTACGCAGACTTTCTCTCCCTGGACATCAGCATGCTGAAGCTTTTCGAGAGCTTCCTGGAGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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| CDS CAA 72 bp | GCAAAGCCAGTCCCAGGAAGAAGCAGGCTCCTCCTATaGTCACCCACATCAGCAATGAGATCCCACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: AKPVPGRSRLLL*SPTSAMRSHWA Trigger: TGCCCAGTGGGATCTCATTGCTGATGTGGGTGACAATAGGAGGAGCCTGCTTCTTCCTGGGACTGGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045550.5 |
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