Pregenerated sensors for XKR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042631Ensembl transcript IDs: ENSMUST00000037235.7
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCCAAGTGCACCTCCCAAGCAGAGGCACCCCACCCTTCATATTaGTGTCAGCCCTCACTCCTCAGGGTTCTCTATCCTCCCAACACC | + |
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Preference number: 1 (lower is better) Translates to: PPKCTSQAEAPHPSY*CQPSLLRVLYPPNT Trigger: GGTGTTGGGAGGATAGAGAACCCTGAGGAGTGAGGGCTGACAGCAATATGAAGGGTGGGGTGCCTCTGCTTGGGAGGTGCACTTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CCA 90 bp | GCACCAGTTGATGCCCTGTGCCCTGGTCCAGGGGAACTTAGAGAATaGGCCACAGGGCTTAAAACGAGGCCTAGAGCCTCCACAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: APVDALCPGPGELRE*ATGLKTRPRASTGL Trigger: CAACCCTGTGGAGGCTCTAGGCCTCGTTTTAAGCCCTGTGGCCCATTCTCTAAGTTCCCCTGGACCAGGGCACAGGGCATCAACTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CCA 90 bp | AATGGGCCACAGGGCTTAAAACGAGGCCTAGAGCCTCCACAGGGTTaGTTGCCCTCTCCCCTAAGGGATCCTAATGGTGGGACCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: NGPQGLKRGLEPPQG*LPSPLRDPNGGTIL Trigger: AAGAATGGTCCCACCATTAGGATCCCTTAGGGGAGAGGGCAACCAACCCTGTGGAGGCTCTAGGCCTCGTTTTAAGCCCTGTGGCCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR TCA 90 bp | CCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTaGAAAACCAGACTCAACACTGTGGTCAATGTGGGGTCAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: PFLDPKIYSHLAWWP*KTRLNTVVNVGSVK Trigger: CTTGACTGACCCCACATTGACCACAGTGTTGAGTCTGGTTTTTCAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CAA 90 bp | TCCTCCCAAGTGCACCTCCCAAGCAGAGGCACCCCACCCTTCATATaGCTGTCAGCCCTCACTCCTCAGGGTTCTCTATCCTCCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: SSQVHLPSRGTPPFI*LSALTPQGSLSSQH Trigger: GTGTTGGGAGGATAGAGAACCCTGAGGAGTGAGGGCTGACAGCAATATGAAGGGTGGGGTGCCTCTGCTTGGGAGGTGCACTTGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR TCA 90 bp | TCTAATCCTCCTCCCGTCCAGTTTCCCTTCCTACAGGAACTGTGCCAACCCTGTAGGGGTAGCACCAGTTaGTGCCCTGTGCCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SNPPPVQFPFLQELCQPCRGSTS*CPVPWS Trigger: GGACCAGGGCACAGGGCATCAACTGGTGCTACCCCT...ACAGGGTTGGCACAGTTCCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR GCA 90 bp | TCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCCAGTTGATGCCCTGTaGCCTGGTCCAGGGGAACTT | + |
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Preference number: 2 (lower is better) Translates to: SLLRVLYPPNTCAVRPPSPVDAL*PGPGEL Trigger: AAGTTCCCCTGGACCAGGGCACAGGGCATCAACTGG...ACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR CCA 90 bp | CCTCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAACACTGTGGTCAATGTaGGGTCAGTCAAGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PHSSGFSILPTPALSDPQTLWSM*GQSSLS Trigger: GGACAGGCTTGACTGACCCCACATTGACCACAGTGT...TTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATAGAGCTCCTCCCAAGTGCTCCCCTCCCACCACATaGCAGCCCTTCCCCCACACT | + |
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Preference number: 2 (lower is better) Translates to: TFHLRGLDFIHNRAPPKCSPPTT*QPFPHT Trigger: AGTGTGGGGGAAGGGCTGCCATGTGGTGGGAGGGGA...GCACTTGGGAGGAGCTCTATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGAACTTAGAGAATGGGCCACAGGGCTTAAAACGAGGCCTAGAGCCTCCACCAGACTCAACACTGTaGTCAATGTGGGGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QGNLENGPQGLKRGLEPPPDSTL*SMWGQS Trigger: TGACTGACCCCACATTGACCACAGTGTTGAGTCTGG...TGGAGGCTCTAGGCCTCGTTTTAAGCCCTGTGGCCCATTCTCTAAGTTCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR CCA 90 bp | TCTAATCCTCCTCCCGTCCAGTTTCCCTTCCTACAGGAACTGTGCCAACCCTGTTGGTGGGACCATTCTTaGATCCAAAGATCTATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SNPPPVQFPFLQELCQPCWWDHS*IQRSIP Trigger: GGGAATAGATCTTTGGATCCAAGAATGGTCCCACCA...ACAGGGTTGGCACAGTTCCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CCA 72 bp | GATGCCCTGTGCCCTGGTCCAGGGGAACTTAGAGAATaGGCCACAGGGCTTAAAACGAGGCCTAGAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: DALCPGPGELRE*ATGLKTRPRAS Trigger: GGAGGCTCTAGGCCTCGTTTTAAGCCCTGTGGCCCATTCTCTAAGTTCCCCTGGACCAGGGCACAGGGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR GCA 72 bp | TGCACCTCCCAAGCAGAGGCACCCCACCCTTCATATTaGTGTCAGCCCTCACTCCTCAGGGTTCTCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: CTSQAEAPHPSY*CQPSLLRVLYP Trigger: AGGATAGAGAACCCTGAGGAGTGAGGGCTGACAGCAATATGAAGGGTGGGGTGCCTCTGCTTGGGAGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR-3UTR CAA 90 bp | GACCCATCTGCACATCTAGAACAAATGGCACCTTGTGACCTTTCACCTGAGGGGCCTCCACAGGGTTGGTaGCCCTCTCCCCTAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: DPSAHLEQMAPCDLSPEGPPQGW*PSPLRD Trigger: ATCCCTTAGGGGAGAGGGCAACCAACCCTGTGGAGG...CCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTTCTAGATGTGCAGATGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CCA 72 bp | GGCCCTGAAAAACCAGACTCAACACTGTGGTCAATGTaGGGTCAGTCAAGCCTGTCCCTTTTGGGAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GPEKPDSTLWSM*GQSSLSLLGGR Trigger: TCTGCCTCCCAAAAGGGACAGGCTTGACTGACCCCACATTGACCACAGTGTTGAGTCTGGTTTTTCAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR GCA 72 bp | GGTCTAGACTTCATCCATAATAGAGCTCCTCCCAAGTaGACCTCCCAAGCAGAGGCACCCCACCCTTCATAT | + |
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Preference number: 3 (lower is better) Translates to: GLDFIHNRAPPK*TSQAEAPHPSY Trigger: ATATGAAGGGTGGGGTGCCTCTGCTTGGGAGGTGCACTTGGGAGGAGCTCTATTATGGATGAAGTCTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR TCA 72 bp | GATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTaGAAAACCAGACTCAACACTGTGGTCAATGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DPKIYSHLAWWP*KTRLNTVVNVG Trigger: CCCCACATTGACCACAGTGTTGAGTCTGGTTTTTCAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGAGATCCCCTCCCACCACATGGCAGCCCTTCCCCCACACTCCCTGAGCGCTGTCCTTGGTGCTaGCGGCGGGTCCCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SQRDPLPPHGSPSPTLPERCPWC*RRVPGS Trigger: GGACCCCGGGACCCGCCGTCAGCACCAAGGACAGCG...CTCAGGGAGTGTGGGGGAAGGGCTGCCATGTGGTGGGAGGGGATCTCTTTGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | CTCCCACCACATGGCAGCCCTTCCCCCACACTCCCTGAGGGGTACTTGGGCCCCGAAGATGCAGCCAGGTaGCTGGGGACCCAGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: LPPHGSPSPTLPEGYLGPEDAAR*LGTQHG Trigger: CCCATGCTGGGTCCCCAGGCACCTGGCTGCATCTTC...GGGGCCCAAGTACCCCTCAGGGAGTGTGGGGGAAGGGCTGCCATGTGGTGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | TACTTGGGCCCCGGGCAGTGCCTTCTTTCTTGTAGGCCCACCAGGGATGATGTGCCAGCTGCGGCGCGCTaGGCAGGAAGGTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YLGPGQCLLSCRPTRDDVPAAAR*AGRSPA Trigger: TGCTGGAGACCTTCCTGCGCAGCGCGCCGCAGCTGG...CACATCATCCCTGGTGGGCCTACAAGAAAGAAGGCACTGCCCGGGGCCCAAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCCCCCAGCTGCACGACCAGTaGGGGCAGCAGCACGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSGFSILPTPALSDPQVPQLHDQ*GQQHEE Trigger: CTCTTCGTGCTGCTGCCCTCACTGGTCGTGCAGCTG...GGGGACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | CCTCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAACCAGCAGGCTGAGCTaGAGTACCAGCTGCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PHSSGFSILPTPALSDPQTSRLS*STSCGA Trigger: CGCGCCGCAGCTGGTACTGCAGCTCAGCCTGCTGGT...TTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCCCACTCCAGTGCCAGAATaGTCTTCCGGAGCCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LLRVLYPPNTCAVRPPSPTPVPE*SSGAGG Trigger: ACCGCCGGCTCCGGAAGACCATTCTGGCACTGGAGT...GGGACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TACTTGGGCCCCGGGCAGTGCCTTCTTTCTTGTAGGCCCACCAGGGATGATGTGACCTTGGCGGACTTGTaGTGGCATCAGCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: YLGPGQCLLSCRPTRDDVTLADL*WHQLEG Trigger: GCCCTCCAGCTGATGCCATCACAAGTCCGCCAAGGT...CACATCATCCCTGGTGGGCCTACAAGAAAGAAGGCACTGCCCGGGGCCCAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | TCTAATCCTCCTCCCGTCCAGTTTCCCTTCCTACAGGAACTGTGCCAACCCTGTCCGCGCCAGCGGCTCTaGAGTCCCAGGTATAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SNPPPVQFPFLQELCQPCPRQRL*SPRYRA Trigger: CGCCCTATACCTGGGACTGCAGAGCCGCTGGCGCGG...ACAGGGTTGGCACAGTTCCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | CCCCAACTCATTCTACACCCACCACAGCTTTCTCCATCTTTCTCAAAGAGATCCAGCGGCGGCGGTAGGTaGCGGCCGAGGATGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: PQLILHPPQLSPSFSKRSSGGGR*RPRMVR Trigger: CCGCACCATCCTCGGCCGGCACCTACCGCCGCCGCT...GGATCTCTTTGAGAAAGATGGAGAAAGCTGTGGTGGGTGTAGAATGAGTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGTCGCTCACCTCCCACTaGGACCCCGTCCCGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGTILGSKDLFPLSLVALSLTSH*DPVPLS Trigger: ACTGAGCGGGACGGGGTCGCAGTGGGAGGTGAGCGA...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | GACCCATCTGCACATCTAGAACAAATGGCACCTTGTGACCTTTCACCTGAGGGGATGCAGCCAGGTGCCTaGGGACCCAGCATGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: DPSAHLEQMAPCDLSPEGMQPGA*GPSMGP Trigger: CGGCCCCATGCTGGGTCCCCAGGCACCTGGCTGCAT...CCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTTCTAGATGTGCAGATGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | CTCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCTCTCAGCACCTTCTaGTACGATGCCAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTPQGSLSSQHLRCQTPKSLSTF*YDARVQ Trigger: CTGGACCCTGGCATCGTACCAGAAGGTGCTGAGAGA...CTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| 3UTR CAA 72 bp | GTGCACCTCCCAAGCAGAGGCACCCCACCCTTCATATaGCTGTCAGCCCTCACTCCTCAGGGTTCTCTATCC | + |
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Preference number: 4 (lower is better) Translates to: VHLPSRGTPPFI*LSALTPQGSLS Trigger: GGATAGAGAACCCTGAGGAGTGAGGGCTGACAGCAATATGAAGGGTGGGGTGCCTCTGCTTGGGAGGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | GACCCATCTGCACATCTAGAACAAATGGCACCTTGTGACCTTTCACCTGAGGGGCGAACCAGCGGAAGCTaGGCAGCTGCACGACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DPSAHLEQMAPCDLSPEGRTSGS*AAARPV Trigger: CACTGGTCGTGCAGCTGCTCAGCTTCCGCTGGTTCG...CCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTTCTAGATGTGCAGATGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCGGCGGTCAATAAAATaGGCATCCCACGCTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLLRVLYPPNTCAVRPPSRRSIK*ASHAGY Trigger: GTACCCAGCGTGGGATGCTCATTTTATTGACCGCCG...ACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | ACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCCTCTCCAGCAGCACGATaGAGTAGTAGAGGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: TPQGSLSSQHLRCQTPKSSPAAR*SSRGSH Trigger: GTGTGACCCTCTACTACTGCATCGTGCTGCTGGAGA...GGACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | TCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCAAGGGAGGCAGAGATaGAGAGAGCCGTCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SLLRVLYPPNTCAVRPPSQGRQR*REPSAV Trigger: AACTGCTGACGGCTCTCTCCATCTCTGCCTCCCTTG...ACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TCTAATCCTCCTCCCGTCCAGTTTCCCTTCCTACAGGAACTGTGCCAACCCTGTGCAAGTCAATCCGAATaGCAGGCCCCTCTGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SNPPPVQFPFLQELCQPCASQSE*QAPLSA Trigger: TGCGGACAGAGGGGCCTGTCATTCGGATTGACTTGC...ACAGGGTTGGCACAGTTCCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | ACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATAGAGCTCCTCCCAAGTGCCCAGCCACAGGTCGGTaGCGCCGTCGGAGAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: TFHLRGLDFIHNRAPPKCPATGR*RRRRRT Trigger: TGTTCTTCTCCGACGGCGCCACCGACCTGTGGCTGG...GCACTTGGGAGGAGCTCTATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | TCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTAAGTCTGTCTCGCCCTaGATGACCCAGAAGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: SLLRVLYPPNTCAVRPPSKSVSP*MTQKVM Trigger: CATGACCTTCTGGGTCATCCAGGGCGAGACAGACTT...ACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGAAACCGGGTCGCACCTaGAAGACAGGCAGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GGTILGSKDLFPLSLVALKPGRT*KTGSVG Trigger: CCCTACACTGCCTGTCTTCCAGGTGCGACCCGGTTT...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | CCTGAAAAACCAGACTCAACACTGTGGTCAATGTGGGGTCAGTCAAGCCTGTCCCACTGTCCTTGGTGCTaGTGGCGGCTCCGACTATGT | + |
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Preference number: 4 (lower is better) Translates to: PEKPDSTLWSMWGQSSLSHCPWC*WRLRLC Trigger: ACATAGTCGGAGCCGCCATCAGCACCAAGGACAGTG...GGACAGGCTTGACTGACCCCACATTGACCACAGTGTTGAGTCTGGTTTTTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | ACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATAGAGCTCCTCCCAAGTGCCCGAGTTGCAGGAGGTaGACGAGGGTCTGCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TFHLRGLDFIHNRAPPKCPSCRR*TRVCSS Trigger: GCTACTGCAGACCCTCGTTCACCTCCTGCAACTCGG...GCACTTGGGAGGAGCTCTATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGTTCGTGCCGCAATGGTaGACAGGTGCCACAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: GGTILGSKDLFPLSLVALFVPQW*TGATAL Trigger: AAGTGCTGTGGCACCTGTTCACCATTGCGGCACGAA...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | AACAAATGGCACCTTGTGACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATCAAGGGGCGAGCCACTaGCGTGGGAGGCAAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: NKWHLVTFHLRGLDFIHNQGASH*RGRQTG Trigger: CCCGGTTTGCCTCCCACGCCAGTGGCTCGCCCCTTG...ATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | CTCACTCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGATGAGCATCCCACGCTaGGTACTTTTTCCTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LTPQGSLSSQHLRCQTPKMSIPR*VLFPRQ Trigger: TTGCCTAGGAAAAAGTACCCAGCGTGGGATGCTCAT...CTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | TCCTCAGGGTTCTCTATCCTCCCAACACCTGCGCTGTCAGACCCCCAAGTCCCCAGCAGAAGATGTAGATaGTACCCACCACCATATTGT | + |
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Preference number: 4 (lower is better) Translates to: SSGFSILPTPALSDPQVPSRRCR*YPPPYC Trigger: ACAATATGGTGGTGGGTATCATCTACATCTTCTGCT...GGGGACTTGGGGGTCTGACAGCGCAGGTGTTGGGAGGATAGAGAACCCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | ACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATAGAGCTCCTCCCAAGTGCAGTACCAGAAGCCAGTaGGCGCTGCGTTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TFHLRGLDFIHNRAPPKCSTRSQ*ALRSPA Trigger: TGCTGGAGAACGCAGCGCTCACTGGCTTCTGGTACT...GCACTTGGGAGGAGCTCTATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | TTAAGACCTTCCTCTAGAGGGCGCGACCCATCTGCACATCTAGAACAAATGGCAGAAGCCAGTGAGCGCTaGGTTCTCCAGCAGCACGAT | + |
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Preference number: 4 (lower is better) Translates to: LRPSSRGRDPSAHLEQMAEASER*VLQQHD Trigger: ATCGTGCTGCTGGAGAACGCAGCGCTCACTGGCTTC...TGCCATTTGTTCTAGATGTGCAGATGGGTCGCGCCCTCTAGAGGAAGGTCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | AGAGATTCCCCCAACTCATTCTACACCCACCACAGCTTTCTCCATCTTTCTCAACTTGGGAGGTGCCCATaGTCCTGTACTGCAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: RDSPNSFYTHHSFLHLSQLGRCP*SCTATG Trigger: CCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAG...TTGAGAAAGATGGAGAAAGCTGTGGTGGGTGTAGAATGAGTTGGGGGAATCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGGTCATGATGCACCAGTaGGCGACGATGAAAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTILGSKDLFPLSLVALVMMHQ*ATMKMP Trigger: TGGCATTTTCATCGTCGCCCACTGGTGCATCATGAC...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | CCTGAAAAACCAGACTCAACACTGTGGTCAATGTGGGGTCAGTCAAGCCTGTCCCGAAGAATACTCCAGTaGCAGAATGGTCTTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEKPDSTLWSMWGQSSLSRRILQ*QNGLPE Trigger: CTCCGGAAGACCATTCTGGCACTGGAGTATTCTTCG...GGACAGGCTTGACTGACCCCACATTGACCACAGTGTTGAGTCTGGTTTTTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | AACAAATGGCACCTTGTGACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATCCGCGCTACCTTCTTTaGTCCGGAAGGCGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKWHLVTFHLRGLDFIHNPRYLL*SGRRQH Trigger: GTGCTGTCGCCTTCCGGACCAAAGAAGGTAGCGCGG...ATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CCA 90 bp | CCCCAACTCATTCTACACCCACCACAGCTTTCTCCATCTTTCTCAAAGAGATCCACTGCAACCGGGGTGTaGCAGGCGAAGAATACTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQLILHPPQLSPSFSKRSTATGV*QAKNTP Trigger: TGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGT...GGATCTCTTTGAGAAAGATGGAGAAAGCTGTGGTGGGTGTAGAATGAGTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | AACAAATGGCACCTTGTGACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATCCACGCAGACCAGGATaGGCGAGTAGAAGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKWHLVTFHLRGLDFIHNPRRPG*ASRSQW Trigger: CCACTGACTTCTACTCGCTCATCCTGGTCTGCGTGG...ATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR TCA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGAGTAATAGACACACATaGAGAATATGCCCAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGTILGSKDLFPLSLVALSNRHT*RICPRQ Trigger: TTGCCTTGGGCATATTCTTCATGTGTGTCTATTACT...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR GCA 90 bp | AGAGATTCCCCCAACTCATTCTACACCCACCACAGCTTTCTCCATCTTTCTCAAAGTCAGTGGAAAAATTaGGGCTGGAGTACCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDSPNSFYTHHSFLHLSQSQWKN*GWSTRS Trigger: GCTTCTGGTACTCCAGCCGCAATTTTTCCACTGACT...TTGAGAAAGATGGAGAAAGCTGTGGTGGGTGTAGAATGAGTTGGGGGAATCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 90 bp | GAGCAGCGCGCACAGCACCCAGCAGCAGTCCCGCAGCTCGTAGCGTaGCCCCGGGCACCCCGCCTCCACCGGTCCCGGGCCCGCGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: EQRAQHPAAVPQLVA*PRAPRLHRSRARDP Trigger: GGGATCGCGGGCCCGGGACCGGTGGAGGCGGGGTGCCCGGGGCCACGCTACGAGCTGCGGGACTGCTGCTGGGTGCTGTGCGCGCTGCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | GAGCCGTCAGCAGTTCCGGCTCTCGGCCGCGGTGGACCAGCAGGCTaGGCTGCAGTACCAGCTGCGGCGCGCTGCGCAGGAAGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPSAVPALGRGGPAG*AAVPAAARCAGRSP Trigger: TGGAGACCTTCCTGCGCAGCGCGCCGCAGCTGGTACTGCAGCTCAGCCTGCTGGTCCACCGCGGCCGAGAGCCGGAACTGCTGACGGCTC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 90 bp | GTCAGCAGTTCCGGCTCTCGGCCGCGGTGGACCAGCAGGCTGAGCTaGAGTACCAGCTGCGGCGCGCTGCGCAGGAAGGTCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSSSGSRPRWTSRLS*STSCGALRRKVSSR Trigger: TCTGCTGGAGACCTTCCTGCGCAGCGCGCCGCAGCTGGTACTGCAGCTCAGCCTGCTGGTCCACCGCGGCCGAGAGCCGGAACTGCTGAC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 90 bp | TGCGACCCCGTCCCGCTCAGTGCCTGTAGTCCTCGGCAGAGACCTTaGCGGACTTGTGATGGCATCAGCTGGAGGGCCACAAGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CDPVPLSACSPRQRP*RTCDGISWRATRPW Trigger: CCAGGGCCTTGTGGCCCTCCAGCTGATGCCATCACAAGTCCGCCAAGGTCTCTGCCGAGGACTACAGGCACTGAGCGGGACGGGGTCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | CTCCCACCACATGGCAGCCCTTCCCCCACACTCCCTGAGGGGTACTTGGGCCCCCGGCTGCGGCCCTCCTaGACATTGAACCAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPHGSPSPTLPEGYLGPRLRPS*TLNQQK Trigger: CTTCTGCTGGTTCAATGTCAAGGAGGGCCGCAGCCG...GGGGCCCAAGTACCCCTCAGGGAGTGTGGGGGAAGGGCTGCCATGTGGTGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 90 bp | GTCAATCCGAATGACAGGCCCCTCTGTCCGCAAGGGGCGAGCCACTaGCGTGGGAGGCAAACCGGGTCGCACCTGGAAGACAGGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VNPNDRPLCPQGASH*RGRQTGSHLEDRQC Trigger: ACACTGCCTGTCTTCCAGGTGCGACCCGGTTTGCCTCCCACGCCAGTGGCTCGCCCCTTGCGGACAGAGGGGCCTGTCATTCGGATTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | CTCCCACCACATGGCAGCCCTTCCCCCACACTCCCTGAGGGGTACTTGGGCCCCGCCGCTTGTCATCTCTaGAGTCTCTCAGCACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPHGSPSPTLPEGYLGPAACHL*SLSAPS Trigger: AGAAGGTGCTGAGAGACTCAAGAGATGACAAGCGGC...GGGGCCCAAGTACCCCTCAGGGAGTGTGGGGGAAGGGCTGCCATGTGGTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 90 bp | GCAGCTCTTGGGAGGTGCCCATGCTCCTGTACTGCAACCGGGGTGTaGCAGGCGAAGAATACTCCAGTGCCAGAATGGTCTTCCGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AALGRCPCSCTATGV*QAKNTPVPEWSSGA Trigger: GGCTCCGGAAGACCATTCTGGCACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 90 bp | GTCTCATACTCCAGCAGCTCTTGGGAGGTGCCCATGCTCCTGTACTaGAACCGGGGTGTGGCAGGCGAAGAATACTCCAGTGCCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VSYSSSSWEVPMLLY*NRGVAGEEYSSARM Trigger: CATTCTGGCACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGCTGGAGTATGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | AGACACTGGCAAAGAGGGCAAAGGCCAGGGTTCGTGCCGCAATGGTaGACAGGTGCCACAGCACTTGGACAACAGCACCCTTGTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RHWQRGQRPGFVPQW*TGATALGQQHPCRT Trigger: TGTCCTACAAGGGTGCTGTTGTCCAAGTGCTGTGGCACCTGTTCACCATTGCGGCACGAACCCTGGCCTTTGCCCTCTTTGCCAGTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 90 bp | GTAGAGCTTGTAGACACTGGCAAAGAGGGCAAAGGCCAGGGTTCGTaGCGCAATGGTGAACAGGTGCCACAGCACTTGGACAACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VELVDTGKEGKGQGS*RNGEQVPQHLDNST Trigger: GGTGCTGTTGTCCAAGTGCTGTGGCACCTGTTCACCATTGCGGCACGAACCCTGGCCTTTGCCCTCTTTGCCAGTGTCTACAAGCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 90 bp | GTCAGTGGAAAAATTGCGGCTGGAGTACCAGAAGCCAGTGAGCGCTaGGTTCTCCAGCAGCACGATGCAGTAGTAGAGGGTCACACGACG | + |
|
Preference number: 5 (lower is better) Translates to: VSGKIAAGVPEASER*VLQQHDAVVEGHTT Trigger: CGTCGTGTGACCCTCTACTACTGCATCGTGCTGCTGGAGAACGCAGCGCTCACTGGCTTCTGGTACTCCAGCCGCAATTTTTCCACTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 90 bp | GCTCCTGTACTGCAACCGGGGTGTGGCAGGCGAAGAATACTCCAGTaGCAGAATGGTCTTCCGGAGCCGGCGGTCAATAAAATGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: APVLQPGCGRRRILQ*QNGLPEPAVNKMSI Trigger: GATGCTCATTTTATTGACCGCCGGCTCCGGAAGACCATTCTGGCACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGTCCGCGCTACCTTCTTaGGTCCGGAAGGCGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGTILGSKDLFPLSLVALSALPS*VRKATA Trigger: TGCTGTCGCCTTCCGGACCAAAGAAGGTAGCGCGGA...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | GGTGGGACCATTCTTGGATCCAAAGATCTATTCCCACTTAGCCTGGTGGCCCTGATACTCCAGCAGCTCTaGGGAGGTGCCCATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGTILGSKDLFPLSLVALILQQL*GGAHAP Trigger: AGGAGCATGGGCACCTCCCAAGAGCTGCTGGAGTAT...CAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCCAAGAATGGTCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | CCAGCATGGGGCCGTTGGGGTGCAAGAGACAGTAATAGACACACATaGAGAATATGCCCAAGGCAAAGCTGGAGGCTACCACGCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PAWGRWGARDSNRHT*RICPRQSWRLPRRP Trigger: TGGTCTGCGTGGTAGCCTCCAGCTTTGCCTTGGGCATATTCTTCATGTGTGTCTATTACTGTCTCTTGCACCCCAACGGCCCCATGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | AGTAGAAGTCAGTGGAAAAATTGCGGCTGGAGTACCAGAAGCCAGTaGGCGCTGCGTTCTCCAGCAGCACGATGCAGTAGTAGAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSQWKNCGWSTRSQ*ALRSPAARCSSRGS Trigger: TGACCCTCTACTACTGCATCGTGCTGCTGGAGAACGCAGCGCTCACTGGCTTCTGGTACTCCAGCCGCAATTTTTCCACTGACTTCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | AACAAATGGCACCTTGTGACCTTTCACCTGAGGGGTCTAGACTTCATCCATAATGCGACAGCACTGTCCTaGGTGCTGATGGCGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NKWHLVTFHLRGLDFIHNATALS*VLMAAP Trigger: CGGAGCCGCCATCAGCACCAAGGACAGTGCTGTCGC...ATTATGGATGAAGTCTAGACCCCTCAGGTGAAAGGTCACAAGGTGCCATTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | AGAATATGCCCAAGGCAAAGCTGGAGGCTACCACGCAGACCAGGATaGGCGAGTAGAAGTCAGTGGAAAAATTGCGGCTGGAGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RICPRQSWRLPRRPG*ASRSQWKNCGWSTR Trigger: TCTGGTACTCCAGCCGCAATTTTTCCACTGACTTCTACTCGCTCATCCTGGTCTGCGTGGTAGCCTCCAGCTTTGCCTTGGGCATATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 90 bp | TACTCCAGTGCCAGAATGGTCTTCCGGAGCCGGCGGTCAATAAAATaGGCATCCCACGCTGGGTACTTTTTCCTAGGCAAGTCAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YSSARMVFRSRRSIK*ASHAGYFFLGKSIR Trigger: TCGGATTGACTTGCCTAGGAAAAAGTACCCAGCGTGGGATGCTCATTTTATTGACCGCCGGCTCCGGAAGACCATTCTGGCACTGGAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | TCTAATCCTCCTCCCGTCCAGTTTCCCTTCCTACAGGAACTGTGCCAACCCTGTAAGTCAGTGGAAAAATaGCGGCTGGAGTACCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPPPVQFPFLQELCQPCKSVEK*RLEYQK Trigger: CTTCTGGTACTCCAGCCGCAATTTTTCCACTGACTT...ACAGGGTTGGCACAGTTCCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS-3UTR CAA 90 bp | AGAGATTCCCCCAACTCATTCTACACCCACCACAGCTTTCTCCATCTTTCTCAACAGGTGCCACAGCACTaGGACAACAGCACCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDSPNSFYTHHSFLHLSQQVPQH*DNSTLV Trigger: TACAAGGGTGCTGTTGTCCAAGTGCTGTGGCACCTG...TTGAGAAAGATGGAGAAAGCTGTGGTGGGTGTAGAATGAGTTGGGGGAATCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 72 bp | GCACAGCACCCAGCAGCAGTCCCGCAGCTCGTAGCGTaGCCCCGGGCACCCCGCCTCCACCGGTCCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQHPAAVPQLVA*PRAPRLHRSRA Trigger: GGCCCGGGACCGGTGGAGGCGGGGTGCCCGGGGCCACGCTACGAGCTGCGGGACTGCTGCTGGGTGCTGTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | AAGTGGCGCCGCAGCCGCTCCCCGCGCCAGCGGCTCTaGAGTCCCAGGTATAGGGCGCGCAGGTACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KWRRSRSPRQRL*SPRYRARRYLQ Trigger: CTGGAGGTACCTGCGCGCCCTATACCTGGGACTGCAGAGCCGCTGGCGCGGGGAGCGGCTGCGGCGCCACTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | CCGCGGTGGACCAGCAGGCTGAGCTGCAGTACCAGCTaGGGCGCGCTGCGCAGGAAGGTCTCCAGCAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: PRWTSRLSCSTS*GALRRKVSSRR Trigger: GCGTCTGCTGGAGACCTTCCTGCGCAGCGCGCCGCAGCTGGTACTGCAGCTCAGCCTGCTGGTCCACCGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | AGGCAGTGTAGGGGTCCCGGCTCGCTCACCTCCCACTaGGACCCCGTCCCGCTCAGTGCCTGTAGTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RQCRGPGSLTSH*DPVPLSACSPR Trigger: CCGAGGACTACAGGCACTGAGCGGGACGGGGTCGCAGTGGGAGGTGAGCGAGCCGGGACCCCTACACTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 72 bp | CAGGCCCCTCTGTCCGCAAGGGGCGAGCCACTGGCGTaGGAGGCAAACCGGGTCGCACCTGGAAGACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAPLSARGEPLA*EANRVAPGRQA Trigger: TGCCTGTCTTCCAGGTGCGACCCGGTTTGCCTCCCACGCCAGTGGCTCGCCCCTTGCGGACAGAGGGGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CAA 90 bp | GCCGAGGATGGTGCGGGCCGGGGGACCAGCTCCGCGCTACCTTCTTaGGTCCGGAAGGCGACAGCACTGTCCTTGGTGCTGATGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AEDGAGRGTSSALPS*VRKATALSLVLMAA Trigger: AGCCGCCATCAGCACCAAGGACAGTGCTGTCGCCTTCCGGACCAAAGAAGGTAGCGCGGAGCTGGTCCCCCGGCCCGCACCATCCTCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CAA 72 bp | GGTGCGGGCCGGGGGACCAGCTCCGCGCTACCTTCTTaGGTCCGGAAGGCGACAGCACTGTCCTTGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGRGTSSALPS*VRKATALSLVL Trigger: CAGCACCAAGGACAGTGCTGTCGCCTTCCGGACCAAAGAAGGTAGCGCGGAGCTGGTCCCCCGGCCCGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 72 bp | AATGACAGGCCCCTCTGTCCGCAAGGGGCGAGCCACTaGCGTGGGAGGCAAACCGGGTCGCACCTGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NDRPLCPQGASH*RGRQTGSHLED Trigger: GTCTTCCAGGTGCGACCCGGTTTGCCTCCCACGCCAGTGGCTCGCCCCTTGCGGACAGAGGGGCCTGTCATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 72 bp | GTCCCGCTCAGTGCCTGTAGTCCTCGGCAGAGACCTTaGCGGACTTGTGATGGCATCAGCTGGAGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VPLSACSPRQRP*RTCDGISWRAT Trigger: TGTGGCCCTCCAGCTGATGCCATCACAAGTCCGCCAAGGTCTCTGCCGAGGACTACAGGCACTGAGCGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CAA 90 bp | AGCTCCGCGCTACCTTCTTTGGTCCGGAAGGCGACAGCACTGTCCTaGGTGCTGATGGCGGCTCCGACTATGTCGCTGTCCTTGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSALPSLVRKATALS*VLMAAPTMSLSLVL Trigger: CAGCACCAAGGACAGCGACATAGTCGGAGCCGCCATCAGCACCAAGGACAGTGCTGTCGCCTTCCGGACCAAAGAAGGTAGCGCGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 72 bp | CTTTGGTCCGGAAGGCGACAGCACTGTCCTTGGTGCTaGTGGCGGCTCCGACTATGTCGCTGTCCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWSGRRQHCPWC*WRLRLCRCPWC Trigger: GCACCAAGGACAGCGACATAGTCGGAGCCGCCATCAGCACCAAGGACAGTGCTGTCGCCTTCCGGACCAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | TGGTCTCATACTCCAGCAGCTCTTGGGAGGTGCCCATaGTCCTGTACTGCAACCGGGGTGTGGCAGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSHTPAALGRCP*SCTATGVWQAK Trigger: CTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGCTGGAGTATGAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | TCCAGCAGCTCTTGGGAGGTGCCCATGCTCCTGTACTaGAACCGGGGTGTGGCAGGCGAAGAATACTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSWEVPMLLY*NRGVAGEEYSS Trigger: ACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CCA 72 bp | GGGAGGTGCCCATGCTCCTGTACTGCAACCGGGGTGTaGCAGGCGAAGAATACTCCAGTGCCAGAATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRCPCSCTATGV*QAKNTPVPEWS Trigger: AGACCATTCTGGCACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CAA 72 bp | CTACCTTCTTTGGTCCGGAAGGCGACAGCACTGTCCTaGGTGCTGATGGCGGCTCCGACTATGTCGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSLVRKATALS*VLMAAPTMSLS Trigger: GGACAGCGACATAGTCGGAGCCGCCATCAGCACCAAGGACAGTGCTGTCGCCTTCCGGACCAAAGAAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | GTAGACACTGGCAAAGAGGGCAAAGGCCAGGGTTCGTaGCGCAATGGTGAACAGGTGCCACAGCACTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VDTGKEGKGQGS*RNGEQVPQHLD Trigger: GTCCAAGTGCTGTGGCACCTGTTCACCATTGCGGCACGAACCCTGGCCTTTGCCCTCTTTGCCAGTGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | CTGCAACCGGGGTGTGGCAGGCGAAGAATACTCCAGTaGCAGAATGGTCTTCCGGAGCCGGCGGTCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQPGCGRRRILQ*QNGLPEPAVNK Trigger: TTTATTGACCGCCGGCTCCGGAAGACCATTCTGGCACTGGAGTATTCTTCGCCTGCCACACCCCGGTTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS GCA 72 bp | ATACTGTGGTCTCATACTCCAGCAGCTCTTGGGAGGTaGCCATGCTCCTGTACTGCAACCGGGGTGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ILWSHTPAALGR*PCSCTATGVWQ Trigger: CTGCCACACCCCGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGCTGGAGTATGAGACCACAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS CAA 90 bp | AAAGGCCAGGGTTCGTGCCGCAATGGTGAACAGGTGCCACAGCACTaGGACAACAGCACCCTTGTAGGACAGAGGCCGCTTGTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: KGQGSCRNGEQVPQH*DNSTLVGQRPLVIS Trigger: AGAGATGACAAGCGGCCTCTGTCCTACAAGGGTGCTGTTGTCCAAGTGCTGTGGCACCTGTTCACCATTGCGGCACGAACCCTGGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 72 bp | CAGTGGAAAAATTGCGGCTGGAGTACCAGAAGCCAGTaGGCGCTGCGTTCTCCAGCAGCACGATGCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: QWKNCGWSTRSQ*ALRSPAARCSS Trigger: ACTACTGCATCGTGCTGCTGGAGAACGCAGCGCTCACTGGCTTCTGGTACTCCAGCCGCAATTTTTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 72 bp | CCAAGGCAAAGCTGGAGGCTACCACGCAGACCAGGATaGGCGAGTAGAAGTCAGTGGAAAAATTGCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRQSWRLPRRPG*ASRSQWKNCGW Trigger: CCAGCCGCAATTTTTCCACTGACTTCTACTCGCTCATCCTGGTCTGCGTGGTAGCCTCCAGCTTTGCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 72 bp | GCCAGAATGGTCTTCCGGAGCCGGCGGTCAATAAAATaGGCATCCCACGCTGGGTACTTTTTCCTAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ARMVFRSRRSIK*ASHAGYFFLGK Trigger: CTTGCCTAGGAAAAAGTACCCAGCGTGGGATGCTCATTTTATTGACCGCCGGCTCCGGAAGACCATTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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| CDS TCA 72 bp | GGCCGTTGGGGTGCAAGAGACAGTAATAGACACACATaGAGAATATGCCCAAGGCAAAGCTGGAGGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: GRWGARDSNRHT*RICPRQSWRLP Trigger: TGGTAGCCTCCAGCTTTGCCTTGGGCATATTCTTCATGTGTGTCTATTACTGTCTCTTGCACCCCAACGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037235.7 |
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