Pregenerated sensors for XKR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035067Ensembl transcript IDs: ENSMUST00000119973.3, ENSMUST00000120820.3, ENSMUST00000176510.2, ENSMUST00000177500.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGATGGTGTCCAGGAACAATGGCCGACTCACCAGAAGCTCTCCTaGGCTCCCTCCCCCTTCCAGGCTGTCCTCTCTAACTGTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: EDGVQEQWPTHQKLS*APSPFQAVLSNCGP Trigger: GGGACCACAGTTAGAGAGGACAGCCTGGAAGGGGGAGGGAGCTCAGGAGAGCTTCTGGTGAGTCGGCCATTGTTCCTGGACACCATCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR GCA 90 bp | AGAGCAAGTGATGAGGACCACAAAGACTGGGCATCCATCCTTGCATaGCAATGTGCCCGCCCATGTGGGGCTGGTGAAGGAGCCCCAGCG | + |
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Preference number: 1 (lower is better) Translates to: RASDEDHKDWASILA*QCARPCGAGEGAPA Trigger: CGCTGGGGCTCCTTCACCAGCCCCACATGGGCGGGCACATTGGCATGCAAGGATGGATGCCCAGTCTTTGTGGTCCTCATCACTTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CCA 90 bp | AGGGAGCTGATCAAAGTCAGAGCAAGTGATGAGGACCACAAAGACTaGGCATCCATCCTTGCATGCCAATGTGCCCGCCCATGTGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RELIKVRASDEDHKD*ASILACQCARPCGA Trigger: AGCCCCACATGGGCGGGCACATTGGCATGCAAGGATGGATGCCCAGTCTTTGTGGTCCTCATCACTTGCTCTGACTTTGATCAGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CCA 90 bp | CACTGCAATAGATGCAGGAAAGCAAACCAGCTAACCAAAGCAGCATaGCAGGAATCCCACAGCCTGCCCAGGATAGTGAGAGGGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: HCNRCRKANQLTKAA*QESHSLPRIVRGPQ Trigger: CTGTGGCCCTCTCACTATCCTGGGCAGGCTGTGGGATTCCTGCCATGCTGCTTTGGTTAGCTGGTTTGCTTTCCTGCATCTATTGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR GCA 90 bp | CTGGATCTTCCCATGCCTGAGGCACACTGGGCTTCTGAGGCTCAGTaGATGGCAGTTGAGAAAGATTTCCTTGGCAACCACAATGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LDLPMPEAHWASEAQ*MAVEKDFLGNHNGS Trigger: ACTGCCATTGTGGTTGCCAAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCATGGGAAGATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR TCA 90 bp | CGGCAGTGTAGCAGAAGTCCAGCAGGTCCTGGAACCCCTTGTACTTaGTGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: RQCSRSPAGPGTPCT*CVYGPQEAMYLRHA Trigger: TGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACATCAAGTACAAGGGGTTCCAGGACCTGCTGGACTTCTGCTACACTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR TCA 90 bp | CAATTTTGCCATTACCATTCTGTGTGGAGGGCTCTCAGGACCAGGTaGCCGCACACGTCTAGAAATCGGATGACCTCAAAGCCACCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QFCHYHSVWRALRTR*PHTSRNRMTSKPPQ Trigger: TTGAGGTGGCTTTGAGGTCATCCGATTTCTAGACGTGTGCGGTCACCTGGTCCTGAGAGCCCTCCACACAGAATGGTAATGGCAAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
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| 3UTR CCA 90 bp | CAGAAGTCCAGCAGGTCCTGGAACCCCTTGTACTTGATGTGTTTATaGTCCACAGGAAGCCATGTACTTGAGGCATGCAGGACCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: QKSSRSWNPLYLMCL*STGSHVLEACRTLF Trigger: AAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACATCAAGTACAAGGGGTTCCAGGACCTGCTGGACTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR TCA 90 bp | CAGCTACCGAGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCAACTaGCAAACTCAAGAAGGATCACATACCAGAACGGCTGCAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: QLPSQNRRQRVSPPN*QTQEGSHTRTAARN Trigger: ATTCCTTGCAGCCGTTCTGGTATGTGATCCTTCTTGAGTTTGTCAGTTGGGAGGAGACACCCTTTGCCTTCTGTTCTGACTCGGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR GCA 90 bp | GTATCTCACACTCTGCTTCTGCCACTTGTCCTGCAGAATGGATTTTaGAGAGCCTGTCCACTTTCTCTAAGAGGCTTCCAGCTTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VSHTLLLPLVLQNGF*RACPLSLRGFQLVA Trigger: AGCCACAAGCTGGAAGCCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGTGTGAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CCA 90 bp | ATGCAGCGTATCTCACACTCTGCTTCTGCCACTTGTCCTGCAGAATaGATTTTGCAGAGCCTGTCCACTTTCTCTAAGAGGCTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: MQRISHSASATCPAE*ILQSLSTFSKRLPA Trigger: AGCTGGAAGCCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGTGTGAGATACGCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CCA 90 bp | CATACTCATAAGTCAACTCTGGATCTTCCCATGCCTGAGGCACACTaGGCTTCTGAGGCTCAGTGCATGGCAGTTGAGAAAGATTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HTHKSTLDLPMPEAH*ASEAQCMAVEKDFL Trigger: AAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCATGGGAAGATCCAGAGTTGACTTATGAGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR GCA 90 bp | CTGATCAATGATCCCTATGATCTAAGGAGCTCACACTGCAATAGATaGAGGAAAGCAAACCAGCTAACCAAAGCAGCATGGCAGGAATCC | + |
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Preference number: 1 (lower is better) Translates to: LINDPYDLRSSHCNR*RKANQLTKAAWQES Trigger: GGATTCCTGCCATGCTGCTTTGGTTAGCTGGTTTGCTTTCCTGCATCTATTGCAGTGTGAGCTCCTTAGATCATAGGGATCATTGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR GCA 90 bp | TACTTGATGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATaGAGGACCCTCTTTTCTTGTGGATGTGAAACCACAAGAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: YLMCLWSTGSHVLEA*RTLFSCGCETTRAV Trigger: GACAGCTCTTGTGGTTTCACATCCACAAGAAAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACATCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR TCA 90 bp | CATGTGGGTTTAAAAAGTTGGTCAACGGTTCTGGACAAATCTTGCTaGCACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: HVGLKSWSTVLDKSC*HRHFLYRSVSGSLQ Trigger: CTGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTGTCCAGAACCGTTGACCAACTTTTTAAACCCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CCA 90 bp | TATTGCTCTGTCCGTGCTTACAAGGCACTACTATTCAACTCACTATaGAATGAAGAGTCATCAATGAAAGGCACACCATGCAGCGTATCT | + |
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Preference number: 1 (lower is better) Translates to: YCSVRAYKALLFNSL*NEESSMKGTPCSVS Trigger: AGATACGCTGCATGGTGTGCCTTTCATTGATGACTCTTCATTCCATAGTGAGTTGAATAGTAGTGCCTTGTAAGCACGGACAGAGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR TCA 90 bp | TTTCCAGGTAGGAATTCTGTAGTCACTGCATTTAAGATTGTCACTTaGTGCTTTTTCTTCTCTTCAAAACTCCTGATCAATGATCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: FPGRNSVVTAFKIVT*CFFFSSKLLINDPY Trigger: ATAGGGATCATTGATCAGGAGTTTTGAAGAGAAGAAAAAGCATCAAGTGACAATCTTAAATGCAGTGACTACAGAATTCCTACCTGGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | AAGTCAGAGCAAGTGATGAGGACCACAAAGACTGGGCATCCATCCTaGCATGCCAATGTGCCCGCCCATGTGGGGCTGGTGAAGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSEQVMRTTKTGHPS*HANVPAHVGLVKEP Trigger: GGGCTCCTTCACCAGCCCCACATGGGCGGGCACATTGGCATGCAAGGATGGATGCCCAGTCTTTGTGGTCCTCATCACTTGCTCTGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGTCTTGCAGGCGGCGTTaGCCGCAACCAAACTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRSCRRR*PQPNLR Trigger: CCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGA...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGTCTTGCAGGCGGCGTTaGCCGCAACCAAACTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGSCRRR*PQPNLR Trigger: CCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGA...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAGCAGCATGGCAGGAATCCCACAGCCTGCCCAGGATAGTGAGAGGGCCAGCTCTCAGGACCAGGTaGCCGCACACGTCTAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TKAAWQESHSLPRIVRGPALRTR*PHTSRN Trigger: ATTTCTAGACGTGTGCGGTCACCTGGTCCTGAGAGC...TGGCCCTCTCACTATCCTGGGCAGGCTGTGGGATTCCTGCCATGCTGCTTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCCAGAGGCAGCTACCGAGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCCCATCTGTCCTTAGATaGACACTCTCCCACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: ASQRQLPSQNRRQRVSPPPSVLR*TLSHPH Trigger: GTGTGGGTGGGAGAGTGTTCATCTAAGGACAGATGG...GGGAGGAGACACCCTTTGCCTTCTGTTCTGACTCGGTAGCTGCCTCTGGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTGCCACTTGTCCTGCAGAATGGATTTTGCAGAGCCTGTCCACTTTCTCTCACCAGAAGCTCTCCTaGGCTCCCTCCCCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASATCPAEWILQSLSTFSHQKLS*APSPFQ Trigger: CTGGAAGGGGGAGGGAGCTCAGGAGAGCTTCTGGTG...AGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCCAGAGGCAGCTACCGAGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCACTTGTCCTGCAGAATaGATTTTGCAGAGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: ASQRQLPSQNRRQRVSPPTCPAE*ILQSLS Trigger: GGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGT...GGGAGGAGACACCCTTTGCCTTCTGTTCTGACTCGGTAGCTGCCTCTGGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | GGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGTTATATTTCTaGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGGGSVYWGKGGLYF*QAALTATKLKVPFS Trigger: TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCCTCCCTTCCCCCAATACACAGAACCACCACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| 3UTR-3UTR TCA 90 bp | GACAACATGAAATGCCTCATGTTCAGGGCATTCCAGCATTCTCCTCCCCTCCCTGACAGGGGACAGTCCTaGGACACACCTGTCACCTTA | + |
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Preference number: 2 (lower is better) Translates to: DNMKCLMFRAFQHSPPLPDRGQS*DTPVTL Trigger: TAAGGTGACAGGTGTGTCTCAGGACTGTCCCCTGTC...AGGGAGGGGAGGAGAATGCTGGAATGCCCTGAACATGAGGCATTTCATGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCGTTCAGCTGGCTTCCACATGGAGTTTCTCTACCTTTTTCCCGGAAGTGTAGCAGTGACTGCAGGTaGGGATGGTGTCCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: PAFSWLPHGVSLPFSRKCSSDCR*GWCPGT Trigger: TGTTCCTGGACACCATCCTCACCTGCAGTCACTGCT...ACACTTCCGGGAAAAAGGTAGAGAAACTCCATGTGGAAGCCAGCTGAACGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGCCAGAGGCAGCTACCGAGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCCTGCAGAATGGATTTTaGAGAGCCTGTCCACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ASQRQLPSQNRRQRVSPPLQNGF*RACPLS Trigger: AGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAG...GGGAGGAGACACCCTTTGCCTTCTGTTCTGACTCGGTAGCTGCCTCTGGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | ACTGGGCTTCTGAGGCTCAGTGCATGGCAGTTGAGAAAGATTTCCTaGGCAACCACAATGGCAGTGACCAGCACACTGAGAGGCCACATT | + |
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Preference number: 2 (lower is better) Translates to: TGLLRLSAWQLRKIS*ATTMAVTSTLRGHI Trigger: AATGTGGCCTCTCAGTGTGCTGGTCACTGCCATTGTGGTTGCCAAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCAGGGCCACAGAGAAGCTaGACGGCAGAGCTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QILLTQTLSLQECLWLSSGPQRS*TAELSP Trigger: TGGAGACAGCTCTGCCGTGCAGCTTCTCTGTGGCCC...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | CGTATCTCACACTCTGCTTCTGCCACTTGTCCTGCAGAATGGATTTaGCAGAGCCTGTCCACTTTCTCTAAGAGGCTTCCAGCTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RISHSASATCPAEWI*QSLSTFSKRLPACG Trigger: GCCACAAGCTGGAAGCCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGTGTGAGATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCAGCGTTCAGCTGGCTTCCACATGGAGTTTCTCTACCTTTTTCCCGGAACTAAGGAGCTCACACTaGAATAGATGCAGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPSVQLASTWSFSTFFPELRSSH*NRCRKA Trigger: TGCTTTCCTGCATCTATTGCAGTGTGAGCTCCTTAG...TTCCGGGAAAAAGGTAGAGAAACTCCATGTGGAAGCCAGCTGAACGCTGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCACTGAATTCCAGCAGGTaGAGGAGGCAGACGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QILLTQTLSLQECLWLSSLNSSR*RRQTKD Trigger: GTCCTTCGTCTGCCTCCTGCACCTGCTGGAATTCAG...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATGCAGGACCCTCTTTTTTAGATCTGCTCTGTaGAGGTCAGTCTGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MCLWSTGSHVLEACRTLFFRSAL*RSVCSP Trigger: TGGGCTGCAGACTGACCTTCACAGAGCAGATCTAAA...AAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCAGCGTATCTCACACTCTaGTTCTGCCACTTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QILLTQTLSLQECLWLSSAYLTL*FCHLSC Trigger: GCAGGACAAGTGGCAGAAGCAGAGTGTGAGATACGC...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCGTTCAGCTGGCTTCCACATGGAGTTTCTCTACCTTTTTCCCGGAAGTGTTCTAACTGTGGTCCCTaGAATCAGTTAGGACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: PAFSWLPHGVSLPFSRKCSNCGP*NQLGQF Trigger: AAACTGTCCTAACTGATTGCAGGGACCACAGTTAGA...ACACTTCCGGGAAAAAGGTAGAGAAACTCCATGTGGAAGCCAGCTGAACGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | GGCTCATGTGGGTTTAAAAAGTTGGTCAACGGTTCTGGACAAATCTaGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GSCGFKKLVNGSGQI*LTQTLSLQECLWLS Trigger: AGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTGTCCAGAACCGTTGACCAACTTTTTAAACCCACATGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTGCCACTTGTCCTGCAGAATGGATTTTGCAGAGCCTGTCCACTTTCTCTAGGGATCCAAGATTCTaGACATGCCATCACCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: ASATCPAEWILQSLSTFSRDPRF*TCHHQK Trigger: TTTTTGGTGATGGCATGTTCAGAATCTTGGATCCCT...AGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATGCAGGACCCTCTTTTCACACTGCAATAGATaGAGGAAAGCAAACCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: MCLWSTGSHVLEACRTLFSHCNR*RKANQL Trigger: TAGCTGGTTTGCTTTCCTGCATCTATTGCAGTGTGA...AAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCTTTGTTCTCTCAATCAGCACCAATCCCATAAATGATCTACACTTGGTGTTGGTGTGGCGGTGGTaGTGGTGGTTCTGTGTATTG | + |
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Preference number: 2 (lower is better) Translates to: LCFVLSISTNPINDLHLVLVWRW*WWFCVL Trigger: CAATACACAGAACCACCACCACCACCGCCACACCAA...CACCAAGTGTAGATCATTTATGGGATTGGTGCTGATTGAGAGAACAAAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
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| 3UTR-3UTR CCA 90 bp | GACAACATGAAATGCCTCATGTTCAGGGCATTCCAGCATTCTCCTCCCCTCCCTGTCACCTTACAAGTGTaGAGTTCCTTTACATACATT | + |
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Preference number: 2 (lower is better) Translates to: DNMKCLMFRAFQHSPPLPVTLQV*SSFTYI Trigger: AATGTATGTAAAGGAACTCCACACTTGTAAGGTGAC...AGGGAGGGGAGGAGAATGCTGGAATGCCCTGAACATGAGGCATTTCATGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR CAA 90 bp | GATAGTCTGCATAGGTTCAATGCGGGCTCATGTGGGTTTAAAAAGTaGGTCAACGGTTCTGGACAAATCTTGCTGACACAGACACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: DSLHRFNAGSCGFKK*VNGSGQILLTQTLS Trigger: AGAAAGTGTCTGTGTCAGCAAGATTTGTCCAGAACCGTTGACCAACTTTTTAAACCCACATGAGCCCGCATTGAACCTATGCAGACTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACTCTTCAACTGACAAGGAGGAGACAGGAAGAACGTGAAAACAGCCATCCTACAGACCTTGTGAGATaGTTTCCAGGTAGGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: LTLQLTRRRQEERENSHPTDLVR*FPGRNS Trigger: AGAATTCCTACCTGGAAATCATCTCACAAGGTCTGT...AGGATGGCTGTTTTCACGTTCTTCCTGTCTCCTCCTTGTCAGTTGAAGAGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATGCAGGACCCTCTTTTATGACAACATGAAATaGCTCATGTTCAGGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: MCLWSTGSHVLEACRTLFYDNMK*LMFRAF Trigger: GAATGCCCTGAACATGAGGCATTTCATGTTGTCATA...AAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCACTGGCTAATTCATTTTaGGTATATCAGATACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QILLTQTLSLQECLWLSSLANSF*VYQIPR Trigger: CCTGGGTATCTGATATACCCAAAATGAATTAGCCAG...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGTTCTGTGAGGAAACATaGCAGTACCTAAAGAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: VARQMLKWHIVSLQGAFWFCEET*QYLKKL Trigger: GAGTTTCTTTAGGTACTGTCATGTTTCCTCACAGAA...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| 3UTR-3UTR CCA 90 bp | TACATATTTCCAACATTCAATTTAGGGATCCAAGATTCTGAACATGCCATCACCAACACACTTAAAAGTTaGGGGAGGGCAGAGTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YIFPTFNLGIQDSEHAITNTLKS*GRAELG Trigger: CCCTAACTCTGCCCTCCCCCAACTTTTAAGTGTGTT...GGTGATGGCATGTTCAGAATCTTGGATCCCTAAATTGAATGTTGGAAATATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
||
| 3UTR CAA 90 bp | GCGTTTATGAACATCTCCTTTGATCTGCTTTTAGAATCTATCAAATaGGGTGTTTGGGAGTTTAATTCTCGTTTGTGTTTTGGTTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AFMNISFDLLLESIK*GVWEFNSRLCFGLV Trigger: AACCAAACCAAAACACAAACGAGAATTAAACTCCCAAACACCCAATTTGATAGATTCTAAAAGCAGATCAAAGGAGATGTTCATAAACGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| 3UTR TCA 72 bp | GTCCAGGAACAATGGCCGACTCACCAGAAGCTCTCCTaGGCTCCCTCCCCCTTCCAGGCTGTCCTCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VQEQWPTHQKLS*APSPFQAVLSN Trigger: GTTAGAGAGGACAGCCTGGAAGGGGGAGGGAGCTCAGGAGAGCTTCTGGTGAGTCGGCCATTGTTCCTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | CCAAGCAGGACCACTCTGAGGAGCTGGAAGGAACCATaGTGGAGTTACCCAGGAAGGATGAGCACGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSRTTLRSWKEP*WSYPGRMSTAV Trigger: CACTGCCGTGCTCATCCTTCCTGGGTAACTCCATCATGGTTCCTTCCAGCTCCTCAGAGTGGTCCTGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | CTCTGCACCCGACACCACCATCCATCTGTCCTTAGATaGACACTCTCCCACCCACACAGGGAAGGAAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LCTRHHHPSVLR*TLSHPHREGNP Trigger: TGGGTTTCCTTCCCTGTGTGGGTGGGAGAGTGTTCATCTAAGGACAGATGGATGGTGGTGTCGGGTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | CTTCTGTGTGGACTCAGGAGCCAAGCAGGACCACTCTaGGGAGCTGGAAGGAACCATGATGGAGTTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLCGLRSQAGPL*GAGRNHDGVTQ Trigger: CTGGGTAACTCCATCATGGTTCCTTCCAGCTCCTCAGAGTGGTCCTGCTTGGCTCCTGAGTCCACACAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | CCCATGCCTGAGGCACACTGGGCTTCTGAGGCTCAGTaGATGGCAGTTGAGAAAGATTTCCTTGGCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PMPEAHWASEAQ*MAVEKDFLGNH Trigger: GTGGTTGCCAAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCCAGAGGCAGCTACCGAGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCCTCTGCTTCTGCCACTaGTCCTGCAGAATGGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASQRQLPSQNRRQRVSPPLCFCH*SCRMDF Trigger: AAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAG...GGGAGGAGACACCCTTTGCCTTCTGTTCTGACTCGGTAGCTGCCTCTGGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | TCCTCACCGAAATCTGAGGATAGCAGTGACTGCAGGTaGGGATGGTGTCCAGGAACAATGGCCGACTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SSPKSEDSSDCR*GWCPGTMADSP Trigger: TGGTGAGTCGGCCATTGTTCCTGGACACCATCCTCACCTGCAGTCACTGCTATCCTCAGATTTCGGTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | GAGGCTTCCAGCTTGTGGCTGCAGACTTATGTGCAGTaGACAGCCTTCAAGTTGGAGGTCCCAATCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EASSLWLQTYVQ*TAFKLEVPITE Trigger: CTCAGTGATTGGGACCTCCAACTTGAAGGCTGTCCACTGCACATAAGTCTGCAGCCACAAGCTGGAAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | GCTTCCATACTCATAAGTCAACTCTGGATCTTCCCATaGCTGAGGCACACTGGGCTTCTGAGGCTCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASILISQLWIFP*LRHTGLLRLSA Trigger: TGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCATGGGAAGATCCAGAGTTGACTTATGAGTATGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | ATCAAAGTCAGAGCAAGTGATGAGGACCACAAAGACTaGGCATCCATCCTTGCATGCCAATGTGCCCGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IKVRASDEDHKD*ASILACQCARP Trigger: TGGGCGGGCACATTGGCATGCAAGGATGGATGCCCAGTCTTTGTGGTCCTCATCACTTGCTCTGACTTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | GGCTGCAGACTTATGTGCAGTGGACAGCCTTCAAGTTaGAGGTCCCAATCACTGAGGGAGCTGATCAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GCRLMCSGQPSS*RSQSLRELIKV Trigger: GACTTTGATCAGCTCCCTCAGTGATTGGGACCTCCAACTTGAAGGCTGTCCACTGCACATAAGTCTGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | TGCCTGAGGCACACTGGGCTTCTGAGGCTCAGTGCATaGCAGTTGAGAAAGATTTCCTTGGCAACCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: CLRHTGLLRLSA*QLRKISLATTM Trigger: CATTGTGGTTGCCAAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | AAGTCAACTCTGGATCTTCCCATGCCTGAGGCACACTaGGCTTCTGAGGCTCAGTGCATGGCAGTTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSTLDLPMPEAH*ASEAQCMAVEK Trigger: TTTCTCAACTGCCATGCACTGAGCCTCAGAAGCCCAGTGTGCCTCAGGCATGGGAAGATCCAGAGTTGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | TTTGTAGTGTTGGTGTTGTTGGTGTGGCGGTGGTGGTaGTGGTTCTGTGTATTGGGGGAAGGGAGGGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: FVVLVLLVWRWW*WFCVLGEGRVI Trigger: TATAACCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCAACACTACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| 3UTR CCA 72 bp | AGCAGGTCCTGGAACCCCTTGTACTTGATGTGTTTATaGTCCACAGGAAGCCATGTACTTGAGGCATGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRSWNPLYLMCL*STGSHVLEACR Trigger: CCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACATCAAGTACAAGGGGTTCCAGGACCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | AAGAAGAGGGGTGAACTACGTATTGATACTTCTGTGTaGACTCAGGAGCCAAGCAGGACCACTCTGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KKRGELRIDTSV*TQEPSRTTLRS Trigger: GCTCCTCAGAGTGGTCCTGCTTGGCTCCTGAGTCCACACAGAAGTATCAATACGTAGTTCACCCCTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | AGCAGAAGTCCAGCAGGTCCTGGAACCCCTTGTACTTaGTGTGTTTATGGTCCACAGGAAGCCATGTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRSPAGPGTPCT*CVYGPQEAMYL Trigger: CAAGTACATGGCTTCCTGTGGACCATAAACACATCAAGTACAAGGGGTTCCAGGACCTGCTGGACTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | ACTCTGCTTCTGCCACTTGTCCTGCAGAATGGATTTTaGAGAGCCTGTCCACTTTCTCTAAGAGGCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLLPLVLQNGF*RACPLSLRGFQ Trigger: CTGGAAGCCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | AGTCAGAACAGAAGGCAAAGGGTGTCTCCTCCCAACTaGCAAACTCAAGAAGGATCACATACCAGAACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SQNRRQRVSPPN*QTQEGSHTRTA Trigger: AGCCGTTCTGGTATGTGATCCTTCTTGAGTTTGTCAGTTGGGAGGAGACACCCTTTGCCTTCTGTTCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | ATCTCACACTCTGCTTCTGCCACTTGTCCTGCAGAATaGATTTTGCAGAGCCTGTCCACTTTCTCTAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISHSASATCPAE*ILQSLSTFSKR Trigger: CCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGTGTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | GATCCCTATGATCTAAGGAGCTCACACTGCAATAGATaGAGGAAAGCAAACCAGCTAACCAAAGCAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: DPYDLRSSHCNR*RKANQLTKAAW Trigger: CCATGCTGCTTTGGTTAGCTGGTTTGCTTTCCTGCATCTATTGCAGTGTGAGCTCCTTAGATCATAGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | CTATGGAATGAAGAGTCATCAATGAAAGGCACACCATaGAGCGTATCTCACACTCTGCTTCTGCCACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LWNEESSMKGTP*SVSHTLLLPLV Trigger: GACAAGTGGCAGAAGCAGAGTGTGAGATACGCTGCATGGTGTGCCTTTCATTGATGACTCTTCATTCCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTTTATGGTCCACAGGAAGCCATGTACTTGAGGCATGCAGGACCCTCTTTCTAACAAATGAGATTTaGAGTAGTGCAAGCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MCLWSTGSHVLEACRTLFLTNEI*SSASQR Trigger: CCTCTGGCTTGCACTACTCAAAATCTCATTTGTTAG...AAAGAGGGTCCTGCATGCCTCAAGTACATGGCTTCCTGTGGACCATAAACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | AACTCTTCAACTGACAAGGAGGAGACAGGAAGAACGTaGAAACAGCCATCCTTATTCCCTCGACACAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: NSSTDKEETGRT*KQPSLFPRHKH Trigger: GTGTTTGTGTCGAGGGAATAAGGATGGCTGTTTTCACGTTCTTCCTGTCTCCTCCTTGTCAGTTGAAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | CTCTGCAGACTTCAGGGGGAATTATTGCTCTGTCCGTaGTTACAAGGCACTACTATTCAACTCACTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCRLQGELLLCP*LQGTTIQLTME Trigger: TTCCATAGTGAGTTGAATAGTAGTGCCTTGTAAGCACGGACAGAGCAATAATTCCCCCTGAAGTCTGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | TTAAAAAGTTGGTCAACGGTTCTGGACAAATCTTGCTaGCACAGACACTTTCTCTACAGGAGTGTCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LKSWSTVLDKSC*HRHFLYRSVSG Trigger: GCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTGTCCAGAACCGTTGACCAACTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | CTTAAGAAAACCTCTGCAGACTTCAGGGGGAATTATTaGTCTGTCCGTGCTTACAAGGCACTACTATTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LKKTSADFRGNY*SVRAYKALLFN Trigger: GTTGAATAGTAGTGCCTTGTAAGCACGGACAGAGCAATAATTCCCCCTGAAGTCTGCAGAGGTTTTCTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | GTCCGTGCTTACAAGGCACTACTATTCAACTCACTATaGAATGAAGAGTCATCAATGAAAGGCACACCATGC | + |
|
Preference number: 3 (lower is better) Translates to: VRAYKALLFNSL*NEESSMKGTPC Trigger: GCATGGTGTGCCTTTCATTGATGACTCTTCATTCCATAGTGAGTTGAATAGTAGTGCCTTGTAAGCACGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | TGCTTACAAGGCACTACTATTCAACTCACTATGGAATaGAGAGTCATCAATGAAAGGCACACCATGCAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CLQGTTIQLTME*RVINERHTMQR Trigger: ACGCTGCATGGTGTGCCTTTCATTGATGACTCTTCATTCCATAGTGAGTTGAATAGTAGTGCCTTGTAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR GCA 72 bp | CTGATCAATGATCCCTATGATCTAAGGAGCTCACACTaGAATAGATGCAGGAAAGCAAACCAGCTAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LINDPYDLRSSH*NRCRKANQLTK Trigger: TTTGGTTAGCTGGTTTGCTTTCCTGCATCTATTGCAGTGTGAGCTCCTTAGATCATAGGGATCATTGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | AAACAGCCATCCTTATTCCCTCGACACAAACACCTCTaGTCTACAATAATGCCTGATTTTAAAAACTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: KQPSLFPRHKHL*STIMPDFKNWR Trigger: CCGCCAGTTTTTAAAATCAGGCATTATTGTAGATCAGAGGTGTTTGTGTCGAGGGAATAAGGATGGCTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CCA 72 bp | TTGGGTATATCAGATACCCAGGCCCAATCAATACTGTaGCTAGAACTGGCTAAAAGAAAACCTCTATTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LGISDTQAQSIL*LELAKRKPLLT Trigger: TGTCAATAGAGGTTTTCTTTTAGCCAGTTCTAGCCACAGTATTGATTGGGCCTGGGTATCTGATATACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR TCA 72 bp | CTGATTCTCTTTGATGGCGTTTATGAACATCTCCTTTaGTCTGCTTTTAGAATCTATCAAATTGGGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LILFDGVYEHLL*SAFRIYQIGCL Trigger: CAAACACCCAATTTGATAGATTCTAAAAGCAGATCAAAGGAGATGTTCATAAACGCCATCAAAGAGAATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACTGGTGGGCGTGACCTaGGTCCCCCGGTACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGLVGVT*VPRYPG Trigger: CCCTGGGTACCGGGGGACCCAGGTCACGCCCACCAG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGCAGGGGGCAAAGGGATaGCCCAGAGCAGCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGQGAKG*PRAARH Trigger: GTGCCGAGCTGCTCTGGGGCATCCCTTTGCCCCCTG...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGCGGAAGCTCAGGCTCTaGACCAGCAGCGACGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRRKLRL*TSSDGT Trigger: GGTGCCGTCGCTGCTGGTGCAGAGCCTGAGCTTCCG...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCCGGCTCTGGTGGGCGTaGCCTGGGTCCCCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFRLWWA*PGSPGT Trigger: GGTACCGGGGGACCCAGGTCACGCCCACCAGAGCCG...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGTGGTAAGGACGCCCTaGCGGGGTAGAGGGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGVVRTP*RGRGPH Trigger: ATGGGGCCCTCTACCCCGTCAGGGCGTCCTTACCAC...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGGCCATGGCGCACCAGTaGACCACCACGAAGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGAMAHQ*TTTKIP Trigger: CGGGATCTTCGTGGTGGTGCACTGGTGCGCCATGGC...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACAGGGGGCAAAGGGATaGCCCAGAGCAGCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGQGAKG*PRAARH Trigger: GTGCCGAGCTGCTCTGGGGCATCCCTTTGCCCCCTG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGCCTCGTCCAGGTTGTaGAGCTGGGCGAAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGASSRL*SWAKPT Trigger: GGTGGGCTTCGCCCAGCTGCACAACCTGGACGAGGC...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGCGGTACCCAGGGGTCTaGGGTGCCATAGGCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRRYPGV*GAIGST Trigger: TGTTGAGCCTATGGCACCTCAGACCCCTGGGTACCG...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGCGGTACCCAGGGGTCTaGGGTGCCATAGGCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGRYPGV*GAIGST Trigger: TGTTGAGCCTATGGCACCTCAGACCCCTGGGTACCG...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGTAGCGAATGCCCACTaGGGTGGGGGTGACGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRVANAH*GGGDVL Trigger: CAGTACGTCACCCCCACCGCAGTGGGCATTCGCTAC...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGCTCGGGATGAGATGGTaGAGAGGCGCCAGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGLGMRW*RGARRG Trigger: ACCTCTTCTGGCGCCTCTTCACCATCTCATCCCGAG...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCACGGCTCTGGTGGGCGTaGCCTGGGTCCCCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSRLWWA*PGSPGT Trigger: GGTACCGGGGGACCCAGGTCACGCCCACCAGAGCCG...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGCCCAGGGGTCTGAGGTaGCATAGGCTCAACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGPRGLR*HRLNIR Trigger: CCTGATGTTGAGCCTATGGCACCTCAGACCCCTGGG...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGTAGCGAATGCCCACTaGGGTGGGGGTGACGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGVANAH*GGGDVL Trigger: CAGTACGTCACCCCCACCGCAGTGGGCATTCGCTAC...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGAGCTGTAGCACCAGTTaGGGGGCGCTCTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGSCSTS*GALSRK Trigger: CTTTCTGGAGAGCGCCCCCCAACTGGTGCTACAGCT...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGCCCATCTGCAGCAGGTaGATGACCGACTGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRPICSR*MTDCQI Trigger: GATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGG...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACTCGGGATGAGATGGTaGAGAGGCGCCAGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGLGMRW*RGARRG Trigger: ACCTCTTCTGGCGCCTCTTCACCATCTCATCCCGAG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCGTGGTAAGGACGCCCTaGCGGGGTAGAGGGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFVVRTP*RGRGPH Trigger: ATGGGGCCCTCTACCCCGTCAGGGCGTCCTTACCAC...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACCCAGGGGTCTGAGGTaGCATAGGCTCAACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGPRGLR*HRLNIR Trigger: CCTGATGTTGAGCCTATGGCACCTCAGACCCCTGGG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGCTCCTGTCTACAAAGTaGGCATCCCAGGCCGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRLLSTK*ASQAGY Trigger: ATACCCGGCCTGGGATGCGCACTTTGTAGACAGGAG...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGGCAGGAGAAACCAAATAGAGAGAGAGCTTCTATGCCTTCATTTTTGGCTGGTGGGCGTGACCTaGGTCCCCCGGTACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRRNQIERELLCLHFWLVGVT*VPRYPG Trigger: CCCTGGGTACCGGGGGACCCAGGTCACGCCCACCAG...CCAAAAATGAAGGCATAGAAGCTCTCTCTCTATTTGGTTTCTCCTGCCCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| 3UTR CAA 72 bp | CAAGTGATGAGGACCACAAAGACTGGGCATCCATCCTaGCATGCCAATGTGCCCGCCCATGTGGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVMRTTKTGHPS*HANVPAHVGLV Trigger: CACCAGCCCCACATGGGCGGGCACATTGGCATGCAAGGATGGATGCCCAGTCTTTGTGGTCCTCATCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CAA 72 bp | GGGAGGGGCATGAGGCCCCTCTCCATCCCTCCAATTTaGCCATTACCATTCTGTGTGGAGGGCTCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGMRPLSIPPI*PLPFCVEGSQD Trigger: GTCCTGAGAGCCCTCCACACAGAATGGTAATGGCAAAATTGGAGGGATGGAGAGGGGCCTCATGCCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCGCCGTGAGGTCCTCCTaGTGTTCCGTCACGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFAVRSS*CSVTAL Trigger: CAGAGCCGTGACGGAACAGCAGGAGGACCTCACGGC...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GGGGCCACTGACAAGGGTACAGCTCTTCAGTCTCTGAAAACCTCCTCACCGAAAAGCCGTAGTCCCCCTTaGGGTAGTAGTCGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GATDKGTALQSLKTSSPKSRSPP*GSSRGP Trigger: TGGCCCTCGACTACTACCGCAAGGGGGACTACGGCT...TTTCGGTGAGGAGGTTTTCAGAGACTGAAGAGCTGTACCCTTGTCAGTGGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCAATTTTGCCATTACCATTCTGTGTGGAGGGCTCTCAGGACCAGGTGACCCACACCTGCCCCATCTaGAGCAGGTGGATGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPILPLPFCVEGSQDQVTHTCPI*SRWMTD Trigger: GTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTG...GGTCACCTGGTCCTGAGAGCCCTCCACACAGAATGGTAATGGCAAAATTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGGAGGCGCAGCATGTTaGCATCTGCATATTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRGGAAC*HLHIRT Trigger: TGTACGAATATGCAGATGTCAACATGCTGCGCCTCC...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAAGAGATAACTCGGGATaGGATGGTGAAGAGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGRDNSG*DGEEAP Trigger: TGGCGCCTCTTCACCATCTCATCCCGAGTTATCTCT...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGACAGGGCAGCGTCTCTaGACTGTTCTTCTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGTGQRL*TVLLDH Trigger: ATGATCCAGAAGAACAGTGCAGAGACGCTGCCCTGT...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACCCCTCTGTAACTCATaGTCTTCTTGTCGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGPLCNS*SSCRPW Trigger: CCAGGGACGACAAGAAGAGCATGAGTTACAGAGGGG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGTGGGGGTGACGTACTaGAGGATGTTAATAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRVGVTY*RMLIVL Trigger: GAGGACTATTAACATCCTGCAGTACGTCACCCCCAC...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAATTTTGCCATTACCATTCTGTGTGGAGGGCTCTCAGGACCAGGTGACAGGTGGATGACCGACTaGCAGATCCACACGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFAITILCGGLSGPGDRWMTD*QIHTER Trigger: CCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCT...GTCACCTGGTCCTGAGAGCCCTCCACACAGAATGGTAATGGCAAAATTGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
||
| CDS-3UTR CCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCATCCAGGTTGTGCAGCTaGGCGAAGCCCACCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSSRLCS*AKPTPT Trigger: CGTGGGGGTGGGCTTCGCCCAGCTGCACAACCTGGA...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGAGGCGCAGCATGTTaGCATCTGCATATTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGGGAAC*HLHIRT Trigger: TGTACGAATATGCAGATGTCAACATGCTGCGCCTCC...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCGTCCTCCTCGCCGCTaGCCACCGCCTCGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWRPPRR*PPPRPG Trigger: ACCTGGACGAGGCGGTGGGCAGCGGCGAGGAGGACG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCAGCTGTAGCACCAGTTaGGGGGCGCTCTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFSCSTS*GALSRK Trigger: CTTTCTGGAGAGCGCCCCCCAACTGGTGCTACAGCT...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | AATTTTGCCATTACCATTCTGTGTGGAGGGCTCTCAGGACCAGGTGACCGCACACCCATCTGCAGCAGGTaGATGACCGACTGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NFAITILCGGLSGPGDRTPICSR*MTDCQI Trigger: GATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGG...TGTGCGGTCACCTGGTCCTGAGAGCCCTCCACACAGAATGGTAATGGCAAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177500.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGGCAGGAGAAACCAAATAGAGAGAGAGCTTCTATGCCTTCATTTTTGGAGCCGTAGTCCCCCTTaGGGTAGTAGTCGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRRNQIERELLCLHFWSRSPP*GSSRGP Trigger: TGGCCCTCGACTACTACCGCAAGGGGGACTACGGCT...CCAAAAATGAAGGCATAGAAGCTCTCTCTCTATTTGGTTTCTCCTGCCCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | GATACCCAGGCCCAATCAATACTGTGGCTAGAACTGGCTAAAAGAAAACCTCTACGGAAGCTCAGGCTCTaGACCAGCAGCGACGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DTQAQSILWLELAKRKPLRKLRL*TSSDGT Trigger: GGTGCCGTCGCTGCTGGTGCAGAGCCTGAGCTTCCG...TAGAGGTTTTCTTTTAGCCAGTTCTAGCCACAGTATTGATTGGGCCTGGGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGCCACTTGTCCTGCAGAATGGATTTTGCAGAGCCTGTCCACTTTCTCTCCCATCTGCAGCAGGTaGATGACCGACTGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ASATCPAEWILQSLSTFSPICSR*MTDCQI Trigger: GATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGG...AGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCGAAGACACAACACAGTaGTGGCACGGCATAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFEDTTQ*WHGIGV Trigger: GACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTC...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCACACACCTGCCCCATCTaGAGCAGGTGGATGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QILLTQTLSLQECLWLSSHTCPI*SRWMTD Trigger: GTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTG...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGTCTGCACTGTTCTTCTaGATCATTATGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLVWRWWWWFCVLGEGRSALFF*IIMQSC Trigger: ACAGCTCTGCATAATGATCCAGAAGAACAGTGCAGA...CCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCGACACAACACAGTGCTaGCACGGCATAGGAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFDTTQC*HGIGVS Trigger: ACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTC...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGATCTTCTGGATCATTATaGAGAGCTGTAGCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGSSGSL*RAVAPV Trigger: AACTGGTGCTACAGCTCTGCATAATGATCCAGAAGA...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCACAGGGCAGCGTCTCTaGACTGTTCTTCTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFTGQRL*TVLLDH Trigger: ATGATCCAGAAGAACAGTGCAGAGACGCTGCCCTGT...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGGCCGTGAGGTCCTCCTaGTGTTCCGTCACGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWAVRSS*CSVTAL Trigger: CAGAGCCGTGACGGAACAGCAGGAGGACCTCACGGC...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCAGCAGTGGCAGATGTaGAGCGAGCTGCTCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWQQWQM*SELLSP Trigger: CGGCGAGAGCAGCTCGCTGCACATCTGCCACTGCTG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCAAGTCTGTCCCACCATaGATGATCCAGAAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLYFLQAALTATKLKVPFKSVPP*MIQKAM Trigger: CATGGCCTTCTGGATCATCCATGGTGGGACAGACTT...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGACGGGTATCGCTTTCTTaGCATGTCAATCTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGRVSLS*HVNLNQ Trigger: CTGATTAAGATTGACATGCCAAGAAAGCGATACCCG...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCAGAGGTGTTGCAGCAGTaGCAGATGTGCAGCGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QILLTQTLSLQECLWLSSEVLQQ*QMCSEL Trigger: CAGCTCGCTGCACATCTGCCACTGCTGCAACACCTC...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CAA 72 bp | TGGCTGCAGACTTATGTGCAGTGGACAGCCTTCAAGTaGGAGGTCCCAATCACTGAGGGAGCTGATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLQTYVQWTAFK*EVPITEGADQS Trigger: ACTTTGATCAGCTCCCTCAGTGATTGGGACCTCCAACTTGAAGGCTGTCCACTGCACATAAGTCTGCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| 3UTR CAA 72 bp | CTGAGGCTCAGTGCATGGCAGTTGAGAAAGATTTCCTaGGCAACCACAATGGCAGTGACCAGCACACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLSAWQLRKIS*ATTMAVTSTLR Trigger: TCTCAGTGTGCTGGTCACTGCCATTGTGGTTGCCAAGGAAATCTTTCTCAACTGCCATGCACTGAGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGCTTTGTTCTCTCAATCAGCACCAATCCCATAAATGATCTACACTTGGTGGCCATGGCGCACCAGTaGACCACCACGAAGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCFVLSISTNPINDLHLVAMAHQ*TTTKIP Trigger: CGGGATCTTCGTGGTGGTGCACTGGTGCGCCATGGC...CACCAAGTGTAGATCATTTATGGGATTGGTGCTGATTGAGAGAACAAAGCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGACTATCGTATAGTATaGGAACATTCGGTATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WCCWCGGGGGGSVYWGKGDYRIV*EHSVSS Trigger: ACTCGATACCGAATGTTCGCATACTATACGATAGTC...TCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCTTGCTGACACAGACACTTTCTCTACAGGAGTGTCTCTGGCTCTCTTCAAGCACGAGGAGGTGTTaGAGCAGTGGCAGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QILLTQTLSLQECLWLSSSTRRC*SSGRCA Trigger: TGCACATCTGCCACTGCTGCAACACCTCCTCGTGCT...TGAAGAGAGCCAGAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGGCAGGAGAAACCAAATAGAGAGAGAGCTTCTATGCCTTCATTTTTGGGACACAACACAGTGCTaGCACGGCATAGGAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGRRNQIERELLCLHFWDTTQC*HGIGVS Trigger: ACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTC...CCAAAAATGAAGGCATAGAAGCTCTCTCTCTATTTGGTTTCTCCTGCCCCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCACCCATGGGTCTCACTTaGAATACCGGCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSPMGLT*NTGRQV Trigger: TACTTGCCTGCCGGTATTCCAAGTGAGACCCATGGG...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| 3UTR CAA 72 bp | CACTCTGCTTCTGCCACTTGTCCTGCAGAATGGATTTaGCAGAGCCTGTCCACTTTCTCTAAGAGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSASATCPAEWI*QSLSTFSKRLP Trigger: TGGAAGCCTCTTAGAGAAAGTGGACAGGCTCTGCAAAATCCATTCTGCAGGACAAGTGGCAGAAGCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR GCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAGTGGGGGTGACGTACTaGAGGATGTTAATAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSVGVTY*RMLIVL Trigger: GAGGACTATTAACATCCTGCAGTACGTCACCCCCAC...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTCCTACATATTTCCAACATTCAATTTAGGGATCCAAGATTCTGAACATCGGAAGCTCAGGCTCTaGACCAGCAGCGACGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGSYIFPTFNLGIQDSEHRKLRL*TSSDGT Trigger: GGTGCCGTCGCTGCTGGTGCAGAGCCTGAGCTTCCG...ATGTTCAGAATCTTGGATCCCTAAATTGAATGTTGGAAATATGTAGGAGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176510.2 ENSMUST00000177500.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGAGGTGGATGACCGACTaGCAGATCCACACGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWRWMTD*QIHTER Trigger: CCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCT...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAAAGTCTGTCCCACCATaGATGATCCAGAAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSKSVPP*MIQKAM Trigger: CATGGCCTTCTGGATCATCCATGGTGGGACAGACTT...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAGAATCCCCAGGTACATaGTGCGGATATACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSESPGT*CGYTST Trigger: TGTGGAGGTATATCCGCACCATGTACCTGGGGATTC...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCTCCTGTCTACAAAGTaGGCATCCCAGGCCGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWLLSTK*ASQAGY Trigger: ATACCCGGCCTGGGATGCGCACTTTGTAGACAGGAG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGCTTTGTTCTCTCAATCAGCACCAATCCCATAAATGATCTACACTTGGTGGAGGTGTTGCAGCAGTaGCAGATGTGCAGCGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFVLSISTNPINDLHLVEVLQQ*QMCSEL Trigger: CAGCTCGCTGCACATCTGCCACTGCTGCAACACCTC...CACCAAGTGTAGATCATTTATGGGATTGGTGCTGATTGAGAGAACAAAGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTGTTTGTTTGTTTGTTTTGGAGAGGAGATTAGCTCTTCCTTCTCCACACACCTGCCCCATCTaGAGCAGGTGGATGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVCLFVLERRLALPSPHTCPI*SRWMTD Trigger: GTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTG...TGGAGAAGGAAGAGCTAATCTCCTCTCCAAAACAAACAAACAAACAAACAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGTCCCCAGGTACATGGTaGGGATATACCTCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWSPGTW*GYTSTP Trigger: AGGTGTGGAGGTATATCCGCACCATGTACCTGGGGA...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | TATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAATCTCTGCACTGTTCTTCTaGATCATTATGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLQAALTATKLKVPFSISALFF*IIMQSC Trigger: ACAGCTCTGCATAATGATCCAGAAGAACAGTGCAGA...GATTGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGGCAGGAGAAACCAAATAGAGAGAGAGCTTCTATGCCTTCATTTTTGGATCCCGAAATACAGCTaGAAGATGGAAGCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRRNQIERELLCLHFWIPKYS*KMEAKR Trigger: CCTCTTTGCTTCCATCTTCCAGCTGTATTTCGGGAT...CCAAAAATGAAGGCATAGAAGCTCTCTCTCTATTTGGTTTCTCCTGCCCCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCCCATGGGTCTCACTTaGAATACCGGCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWPMGLT*NTGRQV Trigger: TACTTGCCTGCCGGTATTCCAAGTGAGACCCATGGG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | TACATATTTCCAACATTCAATTTAGGGATCCAAGATTCTGAACATGCCATCACCAGGTGGATGACCGACTaGCAGATCCACACGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YIFPTFNLGIQDSEHAITRWMTD*QIHTER Trigger: CCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCT...GGTGATGGCATGTTCAGAATCTTGGATCCCTAAATTGAATGTTGGAAATATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176510.2 ENSMUST00000177500.2 |
||
| CDS-3UTR GCA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAGACTATCGTATAGTATaGGAACATTCGGTATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLQAALTATKLKVPFSDYRIV*EHSVSS Trigger: ACTCGATACCGAATGTTCGCATACTATACGATAGTC...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTGTTTGTTTGTTTGTTTTGGAGAGGAGATTAGCTCTTCCTTCTCCAAGCACGAGGAGGTGTTaGAGCAGTGGCAGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFVCLFVLERRLALPSPSTRRC*SSGRCA Trigger: TGCACATCTGCCACTGCTGCAACACCTCCTCGTGCT...TGGAGAAGGAAGAGCTAATCTCCTCTCCAAAACAAACAAACAAACAAACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| 3UTR CAA 72 bp | GGGTTTAAAAAGTTGGTCAACGGTTCTGGACAAATCTaGCTGACACAGACACTTTCTCTACAGGAGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFKKLVNGSGQI*LTQTLSLQECL Trigger: GAGACACTCCTGTAGAGAAAGTGTCTGTGTCAGCAAGATTTGTCCAGAACCGTTGACCAACTTTTTAAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTGTTTGTTTGTTTGTTTTGGAGAGGAGATTAGCTCTTCCTTCTCCAGAAGACACAACACAGTaGTGGCACGGCATAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLFVCLFVLERRLALPSPEDTTQ*WHGIGV Trigger: GACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTC...TGGAGAAGGAAGAGCTAATCTCCTCTCCAAAACAAACAAACAAACAAACAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGTCTTCTGGATCATTATaGAGAGCTGTAGCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VARQMLKWHIVSLQGAFWSSGSL*RAVAPV Trigger: AACTGGTGCTACAGCTCTGCATAATGATCCAGAAGA...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| 3UTR CAA 72 bp | GGCGTAAGGCAGTTGAAGGTTTTTGTTTGTTTTGTTTaGCTTTGCTTTGTTCTCTCAATCAGCACCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVRQLKVFVCFV*LCFVLSISTNP Trigger: GGGATTGGTGCTGATTGAGAGAACAAAGCAAAGCAAAACAAAACAAACAAAAACCTTCAACTGCCTTACGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CCA 90 bp | TGTTTGTTTGTTTGTTTGTTTGTTTTGGAGAGGAGATTAGCTCTTCCTTCTCCACGGGTATCGCTTTCTTaGCATGTCAATCTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLFVCLFVLERRLALPSPRVSLS*HVNLNQ Trigger: CTGATTAAGATTGACATGCCAAGAAAGCGATACCCG...TGGAGAAGGAAGAGCTAATCTCCTCTCCAAAACAAACAAACAAACAAACAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS GCA 90 bp | AGCGCAGGCAGGCGGAGCGGCAGCCCCAGTAGCACGAGGAGGTGTTaGAGCAGTGGCAGATGTGCAGCGAGCTGCTCTCGCCGGGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGRRSGSPSSTRRC*SSGRCAASCSRRAR Trigger: GCGAGCCCGGCGAGAGCAGCTCGCTGCACATCTGCCACTGCTGCAACACCTCCTCGTGCTACTGGGGCTGCCGCTCCGCCTGCCTGCGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS GCA 90 bp | TTAGAGCTCCACACCTGCCCCATCTGCAGCAGGTGGATGACCGACTaGCAGATCCACACGGAGAGGCGGCACAGACGCTGCGCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LELHTCPICSRWMTD*QIHTERRHRRCAPG Trigger: CCCGGGGGCGCAGCGTCTGTGCCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTGGAGCTCTAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176510.2 ENSMUST00000177500.2 |
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| CDS GCA 90 bp | CCAGCACGAAGAACAGGGTCAGCCCGAAGCAGCCGTAGTCCCCCTTaGGGTAGTAGTCGAGGGCCAGCCACAGGTCGGTACCCACGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PARRTGSARSSRSPP*GSSRGPATGRYPRP Trigger: GGGACGTGGGTACCGACCTGTGGCTGGCCCTCGACTACTACCGCAAGGGGGACTACGGCTGCTTCGGGCTGACCCTGTTCTTCGTGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000176510.2 |
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| CDS GCA 90 bp | ATATACCTCCACACCTGCCCCATCTGCAGCAGGTGGATGACCGACTaGCAGATCCACACGGAGAGGCGGCACAGACGCTGCGCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYLHTCPICSRWMTD*QIHTERRHRRCAPG Trigger: CCCGGGGGCGCAGCGTCTGTGCCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTGGAGGTATAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS GCA 90 bp | CTCACTTGGAATACCGGCAGGCAAGTATCAGCCGTGAGGTCCTCCTaGTGTTCCGTCACGGCTCTGGTGGGCGTGACCTGGGTCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LTWNTGRQVSAVRSS*CSVTALVGVTWVPR Trigger: CCGGGGGACCCAGGTCACGCCCACCAGAGCCGTGACGGAACAGCAGGAGGACCTCACGGCTGATACTTGCCTGCCGGTATTCCAAGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS CCA 90 bp | TACATGGTGCGGATATACCTCCACACCTGCCCCATCTGCAGCAGGTaGATGACCGACTGCCAGATCCACACGGAGAGGCGGCACAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: YMVRIYLHTCPICSR*MTDCQIHTERRHRR Trigger: GCGTCTGTGCCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTGGAGGTATATCCGCACCATGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS CCA 90 bp | CATGTCTTTTGCTTAGAGCTCCACACCTGCCCCATCTGCAGCAGGTaGATGACCGACTGCCAGATCCACACGGAGAGGCGGCACAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: HVFCLELHTCPICSR*MTDCQIHTERRHRR Trigger: GCGTCTGTGCCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTGGAGCTCTAAGCAAAAGACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176510.2 ENSMUST00000177500.2 |
||
| CDS GCA 90 bp | CAGCAGCTCATAGAGCAGAGGCCCATCTCGGTAGCGAATGCCCACTaGGGTGGGGGTGACGTACTGCAGGATGTTAATAGTCCTCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQLIEQRPISVANAH*GGGDVLQDVNSPPQ Trigger: CTGCGGAGGACTATTAACATCCTGCAGTACGTCACCCCCACCGCAGTGGGCATTCGCTACCGAGATGGGCCTCTGCTCTATGAGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGTTGGTGTGGCGGTGGTGGTGGTGGTTCTGTGTATTGGGGGAAGGGAGGGCCCCATGGGTCTCACTaGGAATACCGGCAGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CCWCGGGGGGSVYWGKGGPHGSH*EYRQAS Trigger: ACTTGCCTGCCGGTATTCCAAGTGAGACCCATGGGG...CCCTCCCTTCCCCCAATACACAGAACCACCACCACCACCGCCACACCAACAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGAAATTCAAGCCTTGTCTTTTCCTCTTTCCACAGACCACTAACCCCTTCCCTGCGGCGCGGCTTCTaGCCCAGCAGCGAGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGNSSLVFSSFHRPLTPSLRRGF*PSSERR Trigger: CCTGCGCTCGCTGCTGGGCAAGAAGCCGCGCCGCAG...GGAAGGGGTTAGTGGTCTGTGGAAAGAGGAAAAGACAAGGCTTGAATTTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176510.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCTGCGGCGCGGCTTCTaGCCCAGCAGCGAGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VARQMLKWHIVSLQGAFWLRRGF*PSSERR Trigger: CCTGCGCTCGCTGCTGGGCAAGAAGCCGCGCCGCAG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CAA 90 bp | CTTTGCTTTGTTCTCTCAATCAGCACCAATCCCATAAATGATCTACACTTGGTGACCGCCTCGTCCAGGTaGTGCAGCTGGGCGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCFVLSISTNPINDLHLVTASSR*CSWAKP Trigger: GGGCTTCGCCCAGCTGCACAACCTGGACGAGGCGGT...CACCAAGTGTAGATCATTTATGGGATTGGTGCTGATTGAGAGAACAAAGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS-3UTR CAA 90 bp | GGGTTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCAGGAGGCGCAGCATGTaGACATCTGCATATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLYFLQAALTATKLKVPFRRRSM*TSAYSY Trigger: GTACGAATATGCAGATGTCAACATGCTGCGCCTCCT...GAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS GCA 90 bp | CATGAGCGTAATCCCAGCCACAAAGCTAACGAAGACACAACACAGTaGTGGCACGGCATAGGAGTCAGTGCTCTCCGGATTTCTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HERNPSHKANEDTTQ*WHGIGVSALRISVK Trigger: TTTTACAGAAATCCGGAGAGCACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTCGTTAGCTTTGTGGCTGGGATTACGCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS CCA 90 bp | GAGCGTAATCCCAGCCACAAAGCTAACGAAGACACAACACAGTGCTaGCACGGCATAGGAGTCAGTGCTCTCCGGATTTCTGTAAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: ERNPSHKANEDTTQC*HGIGVSALRISVKI Trigger: TATTTTTACAGAAATCCGGAGAGCACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTCGTTAGCTTTGTGGCTGGGATTACGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CAA 90 bp | TTATATTTCTTGCAGGCGGCGTTGACCGCAACCAAACTTAAGGTCCCCTTCTCAAGGAGGCGCAGCATGTaGACATCTGCATATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LYFLQAALTATKLKVPFSRRRSM*TSAYSY Trigger: GTACGAATATGCAGATGTCAACATGCTGCGCCTCCT...TGAGAAGGGGACCTTAAGTTTGGTTGCGGTCAACGCCGCCTGCAAGAAATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS-3UTR CAA 90 bp | GTTGCTAGGCAAATGTTAAAATGGCACATAGTCAGCCTTCAAGGAGCTTTTTGGCCCCATGGGTCTCACTaGGAATACCGGCAGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VARQMLKWHIVSLQGAFWPHGSH*EYRQAS Trigger: ACTTGCCTGCCGGTATTCCAAGTGAGACCCATGGGG...CCAAAAAGCTCCTTGAAGGCTGACTATGTGCCATTTTAACATTTGCCTAGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS GCA 90 bp | AAGGAACGTCAAGGCAGCATTCTCGGTCAAGACTATCGTATAGTATaGGAACATTCGGTATCGAGTCCGCCCTTCCTTGACGTTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KERQGSILGQDYRIV*EHSVSSPPFLDVKP Trigger: TGGTTTAACGTCAAGGAAGGGCGGACTCGATACCGAATGTTCGCATACTATACGATAGTCTTGACCGAGAATGCTGCCTTGACGTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS GCA 72 bp | ACGATCCACAGGCAGTCAAGCCACGGCCGCTCCACCTaGGGCGACGCGGGCTGCGGTCGGCCGGCCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TIHRQSSHGRST*GDAGCGRPAEG Trigger: GCCCTCGGCCGGCCGACCGCAGCCCGCGTCGCCGCAGGTGGAGCGGCCGTGGCTTGACTGCCTGTGGATCGT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000176510.2 |
||
| CDS CCA 72 bp | TCGCCGCTGCCCACCGCCTCGTCCAGGTTGTGCAGCTaGGCGAAGCCCACCCCCACGCCACCGCCATCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SPLPTASSRLCS*AKPTPTPPPSD Trigger: ATCCGATGGCGGTGGCGTGGGGGTGGGCTTCGCCCAGCTGCACAACCTGGACGAGGCGGTGGGCAGCGGCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS TCA 72 bp | GGTCCTCCTGCTGTTCCGTCACGGCTCTGGTGGGCGTaGCCTGGGTCCCCCGGTACCCAGGGGTCTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPPAVPSRLWWA*PGSPGTQGSEV Trigger: CACCTCAGACCCCTGGGTACCGGGGGACCCAGGTCACGCCCACCAGAGCCGTGACGGAACAGCAGGAGGACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
||
| CDS GCA 72 bp | AGGCGGAGCGGCAGCCCCAGTAGCACGAGGAGGTGTTaGAGCAGTGGCAGATGTGCAGCGAGCTGCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSGSPSSTRRC*SSGRCAASCSR Trigger: GCGAGAGCAGCTCGCTGCACATCTGCCACTGCTGCAACACCTCCTCGTGCTACTGGGGCTGCCGCTCCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119973.3 |
||
| CDS GCA 72 bp | CACACCTGCCCCATCTGCAGCAGGTGGATGACCGACTaGCAGATCCACACGGAGAGGCGGCACAGACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HTCPICSRWMTD*QIHTERRHRRC Trigger: GCAGCGTCTGTGCCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119973.3 ENSMUST00000176510.2 ENSMUST00000177500.2 |
||
| CDS GCA 72 bp | AGAACAGGGTCAGCCCGAAGCAGCCGTAGTCCCCCTTaGGGTAGTAGTCGAGGGCCAGCCACAGGTCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RTGSARSSRSPP*GSSRGPATGRY Trigger: GTACCGACCTGTGGCTGGCCCTCGACTACTACCGCAAGGGGGACTACGGCTGCTTCGGGCTGACCCTGTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000176510.2 |
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| CDS CCA 72 bp | CGCCCTGACGGGGTAGAGGGCCCCATGGGTCTCACTTaGAATACCGGCAGGCAAGTATCAGCCGTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RPDGVEGPMGLT*NTGRQVSAVRS Trigger: GGACCTCACGGCTGATACTTGCCTGCCGGTATTCCAAGTGAGACCCATGGGGCCCTCTACCCCGTCAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS GCA 72 bp | AATACCGGCAGGCAAGTATCAGCCGTGAGGTCCTCCTaGTGTTCCGTCACGGCTCTGGTGGGCGTGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: NTGRQVSAVRSS*CSVTALVGVTW Trigger: CCAGGTCACGCCCACCAGAGCCGTGACGGAACAGCAGGAGGACCTCACGGCTGATACTTGCCTGCCGGTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS CCA 72 bp | TGCTTAGAGCTCCACACCTGCCCCATCTGCAGCAGGTaGATGACCGACTGCCAGATCCACACGGAGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: CLELHTCPICSR*MTDCQIHTERR Trigger: CCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCAGATGGGGCAGGTGTGGAGCTCTAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176510.2 ENSMUST00000177500.2 |
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| CDS TCA 72 bp | GTCTCACTTGGAATACCGGCAGGCAAGTATCAGCCGTaGGGTCCTCCTGCTGTTCCGTCACGGCTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VSLGIPAGKYQP*GPPAVPSRLWW Trigger: CCACCAGAGCCGTGACGGAACAGCAGGAGGACCTCACGGCTGATACTTGCCTGCCGGTATTCCAAGTGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS GCA 72 bp | ATAGAGCAGAGGCCCATCTCGGTAGCGAATGCCCACTaGGGTGGGGGTGACGTACTGCAGGATGTTAATAGT | + |
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Preference number: 6 (lower is better) Translates to: IEQRPISVANAH*GGGDVLQDVNS Trigger: ACTATTAACATCCTGCAGTACGTCACCCCCACCGCAGTGGGCATTCGCTACCGAGATGGGCCTCTGCTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS CCA 72 bp | GAGGAGACACAGGGCAGCGTCTCTGCACTGTTCTTCTaGATCATTATGCAGAGCTGTAGCACCAGTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: EETQGSVSALFF*IIMQSCSTSWG Trigger: CCCCCAACTGGTGCTACAGCTCTGCATAATGATCCAGAAGAACAGTGCAGAGACGCTGCCCTGTGTCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS CCA 72 bp | CCCAGCCACAAAGCTAACGAAGACACAACACAGTGCTaGCACGGCATAGGAGTCAGTGCTCTCCGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSHKANEDTTQC*HGIGVSALRIS Trigger: AGAAATCCGGAGAGCACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTCGTTAGCTTTGTGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS GCA 72 bp | AATCCCAGCCACAAAGCTAACGAAGACACAACACAGTaGTGGCACGGCATAGGAGTCAGTGCTCTCCGGATT | + |
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Preference number: 6 (lower is better) Translates to: NPSHKANEDTTQ*WHGIGVSALRI Trigger: AATCCGGAGAGCACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTCTTCGTTAGCTTTGTGGCTGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS GCA 72 bp | CAAGGCAGCATTCTCGGTCAAGACTATCGTATAGTATaGGAACATTCGGTATCGAGTCCGCCCTTCCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: QGSILGQDYRIV*EHSVSSPPFLD Trigger: GTCAAGGAAGGGCGGACTCGATACCGAATGTTCGCATACTATACGATAGTCTTGACCGAGAATGCTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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| CDS GCA 72 bp | AGACACAACACAGTGCTGGCACGGCATAGGAGTCAGTaGTCTCCGGATTTCTGTAAAAATACCAAAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: RHNTVLARHRSQ*SPDFCKNTKGT Trigger: CGTTCCTTTGGTATTTTTACAGAAATCCGGAGAGCACTGACTCCTATGCCGTGCCAGCACTGTGTTGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119973.3 ENSMUST00000120820.3 |
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