Pregenerated sensors for XK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015342Ensembl transcript IDs: ENSMUST00000015486.7
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGGGTTGTTaGGTTTGGTGGCACGAACCTTCCCTGGCTGAGCCATCGCACATG | + |
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Preference number: 1 (lower is better) Translates to: SFLPPCRPQGWKLGC*VWWHEPSLAEPSHM Trigger: CATGTGCGATGGCTCAGCCAGGGAAGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATaGAAGTTGGGTTGTTGGGTTTGGTGGCACGAACCTTCCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: AVGTLSFLPPCRPQG*KLGCWVWWHEPSLA Trigger: AGCCAGGGAAGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 90 bp | GAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTaGGTTGTTGGGTTTGGTGGCACGAACCTTCCCTGGCTGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: ELFLSFHHVGPKDGS*VVGFGGTNLPWLSH Trigger: ATGGCTCAGCCAGGGAAGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 90 bp | ATGACGCTGAGAAGCAGTCCACAAAAGTGCATACCCACAATCCACTaGCTGAGACGCACTGGCACATGCAACCATGCCAATGCTGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: MTLRSSPQKCIPTIH*LRRTGTCNHANAVK Trigger: TTTTACAGCATTGGCATGGTTGCATGTGCCAGTGCGTCTCAGCCAGTGGATTGTGGGTATGCACTTTTGTGGACTGCTTCTCAGCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 90 bp | CATGCATACACACACCATAGTTTGCTTTTAGAAATCAGACAGCCGTaGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGA | + |
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Preference number: 1 (lower is better) Translates to: HAYTHHSLLLEIRQP*ELFLSFHHVGPKDG Trigger: TCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGCTGTCTGATTTCTAAAAGCAAACTATGGTGTGTGTATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 90 bp | ACCAGCTCAACTGAAACTTCAGGGATACTGTGTCAATCAATGAAATaGCCAGTGAGGATGCAAGAACAGAACAGAGTCAAATGCGAAACA | + |
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Preference number: 1 (lower is better) Translates to: TSSTETSGILCQSMK*PVRMQEQNRVKCET Trigger: TGTTTCGCATTTGACTCTGTTCTGTTCTTGCATCCTCACTGGCCATTTCATTGATTGACACAGTATCCCTGAAGTTTCAGTTGAGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 90 bp | GAACAAAGTTGTAAAATCCCTAGGAACCTATCCCAGCTATCATGGTaGCTCTTGTATAAAGCTATATTCAGTAGTAGTAAAGCATTAGGC | + |
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Preference number: 1 (lower is better) Translates to: EQSCKIPRNLSQLSW*LLYKAIFSSSKALG Trigger: GCCTAATGCTTTACTACTACTGAATATAGCTTTATACAAGAGTCACCATGATAGCTGGGATAGGTTCCTAGGGATTTTACAACTTTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 90 bp | CTCTTGTATAAAGCTATATTCAGTAGTAGTAAAGCATTAGGCTACTaGGACAACAGGCTAGGAACTAGAAAACGAGCATTTCTCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: LLYKAIFSSSKALGY*DNRLGTRKRAFLFI Trigger: AATGAAGAGAAATGCTCGTTTTCTAGTTCCTAGCCTGTTGTCTCAGTAGCCTAATGCTTTACTACTACTGAATATAGCTTTATACAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CAA 90 bp | GGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTaGGGTTGTTGGGTTTGGTGGCACGAACCTTCCCTGGCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GTLSFLPPCRPQGWK*GCWVWWHEPSLAEP Trigger: TGGCTCAGCCAGGGAAGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CAA 90 bp | AGTGTCAGAGTGGCGCTAATCTCACTCTCAAGGCATGACCTGAAATaGGAAATGGGTACCATCTCTCCCCTCAGTCACTGGAAAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SVRVALISLSRHDLK*EMGTISPLSHWKAS Trigger: TGAAGCTTTCCAGTGACTGAGGGGAGAGATGGTACCCATTTCCAATTTCAGGTCATGCCTTGAGAGTGAGATTAGCGCCACTCTGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGCCTTTGTCAGAGTACTaGCAATATTCTATCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLPLSEY*QYSIQP Trigger: GGGTTGGATAGAATATTGTCAGTACTCTGACAAAGG...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR GCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGCAGAACAGAGTCAAATaGGAAACAAACTGTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLQNRVK*ETNCGV Trigger: TACCCCACAGTTTGTTTCGCATTTGACTCTGTTCTG...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGAAGAGCATTTTGGGTTaGCCTAGGGATGTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLKSILG*PRDVLP Trigger: AGGAAGAACATCCCTAGGTCAACCCAAAATGCTCTT...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR GCA 90 bp | GCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGGTGAAATCGTGCCTTAGTCCCTaGGCAGGGCTCATGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: ACQSGYSWLCTKSLSEVKSCLSP*AGLMMC Trigger: ACACATCATGAGCCCTGCGCAGGGACTAAGGCACGA...TTTCACCTCACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR GCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGGCCCTTGAAACAAAATaGACATTGCATGCCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLALETK*TLHARV Trigger: CACTCTGGCATGCAATGTGCATTTTGTTTCAAGGGC...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | GCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGGTGAAACAGCTCACAGGGAACTaGCAGCTAACTTCGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ACQSGYSWLCTKSLSEVKQLTGN*QLTSCL Trigger: AAGGCACGAAGTTAGCTGTCAGTTCCCTGTGAGCTG...TTTCACCTCACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGCCAAATGTAGGCCCTTaGAACAAAATGCACATTGCA | + |
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Preference number: 2 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLPNVGP*NKMHIA Trigger: TGCAATGTGCATTTTGTTTCAAGGGCCTACATTTGG...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGGAAATGGGTACCATCTCTCCCCTCAGTCACTGGAAAGCTTCAAGGAATATGACCAGCTCAACTaGAACTTCAGGGATACTGTG | + |
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Preference number: 2 (lower is better) Translates to: EIGNGYHLSPQSLESFKEYDQLN*NFRDTV Trigger: CACAGTATCCCTGAAGTTTCAGTTGAGCTGGTCATA...TTCCTTGAAGCTTTCCAGTGACTGAGGGGAGAGATGGTACCCATTTCCAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGGAAATGGGTACCATCTCTCCCCTCAGTCACTGGAAAGCTTCAAGGAACTTCACATTAAAGACTaGAAACACCTGGTGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EIGNGYHLSPQSLESFKELHIKD*KHLVPV Trigger: TACAGGCACCAGGTGTTTTCAGTCTTTAATGTGAAG...TTCCTTGAAGCTTTCCAGTGACTGAGGGGAGAGATGGTACCCATTTCCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGGAAATGGGTACCATCTCTCCCCTCAGTCACTGGAAAGCTTCAAGGAAATGATGGGCTGCCTATaGATTCTCATACAGGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: EIGNGYHLSPQSLESFKEMMGCL*ILIQVN Trigger: GTTTACCTGTATGAGAATGCATAGGCAGCCCATCAT...TTCCTTGAAGCTTTCCAGTGACTGAGGGGAGAGATGGTACCCATTTCCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGTACTTGCTATGTATGTTCAACAGTTTTGTACCTCTGAGCAAGAAAAGAAAATGCACATTGCATaGCAGAGTGGCTACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: FPVLAMYVQQFCTSEQEKKMHIA*QSGYSW Trigger: CCAACTGTAGCCACTCTGGCATGCAATGTGCATTTT...CTTTTCTTGCTCAGAGGTACAAAACTGTTGAACATACATAGCAAGTACAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR CCA 90 bp | TGCACATTGCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGTGTCAATCAATGAAATaGCCAGTGAGGATGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: CTLHARVATVGYVQKVLVCQSMK*PVRMQE Trigger: TTCTTGCATCCTCACTGGCCATTTCATTGATTGACA...CACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGCAATGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 72 bp | CCACCATGTAGGCCCCAAGGATGGAAGTTGGGTTGTTaGGTTTGGTGGCACGAACCTTCCCTGGCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PPCRPQGWKLGC*VWWHEPSLAEP Trigger: TGGCTCAGCCAGGGAAGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR GCA 72 bp | TTTGAGTCAATGACGCTGAGAAGCAGTCCACAAAAGTaGATACCCACAATCCACTGGCTGAGACGCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: FESMTLRSSPQK*IPTIHWLRRTG Trigger: GCCAGTGCGTCTCAGCCAGTGGATTGTGGGTATGCACTTTTGTGGACTGCTTCTCAGCGTCATTGACTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 72 bp | ACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATaGAAGTTGGGTTGTTGGGTTTGGTGGCACGAACCT | + |
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Preference number: 3 (lower is better) Translates to: TLSFLPPCRPQG*KLGCWVWWHEP Trigger: AGGTTCGTGCCACCAAACCCAACAACCCAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR CAA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGCCCAAATGTAGGCCCTaGAAACAAAATGCACATTGC | + |
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Preference number: 3 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLPKCRP*KQNAHC Trigger: GCAATGTGCATTTTGTTTCAAGGGCCTACATTTGGG...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 72 bp | AAGTGTCAGAGTGGCGCTAATCTCACTCTCAAGGCATaGCCTGAAATTGGAAATGGGTACCATCTCTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: KCQSGANLTLKA*PEIGNGYHLSP Trigger: AGGGGAGAGATGGTACCCATTTCCAATTTCAGGTCATGCCTTGAGAGTGAGATTAGCGCCACTCTGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR GCA 72 bp | CTGGCTGAGACGCACTGGCACATGCAACCATGCCAATaGTGTAAAACAGATCCCAAGGAAATGCTGCATTTT | + |
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Preference number: 3 (lower is better) Translates to: LAETHWHMQPCQ*CKTDPKEMLHF Trigger: AAAATGCAGCATTTCCTTGGGATCTGTTTTACAGCATTGGCATGGTTGCATGTGCCAGTGCGTCTCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 72 bp | ACACACCATAGTTTGCTTTTAGAAATCAGACAGCCGTaGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: THHSLLLEIRQP*ELFLSFHHVGP Trigger: GGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGCTGTCTGATTTCTAAAAGCAAACTATGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 72 bp | GTACCAATGGATCCTAAAGTCCCAAATGTAGGCCCTTaGAACAAAATGCACATTGCATGCCAGAGTGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: VPMDPKVPNVGP*NKMHIACQSGY Trigger: GTAGCCACTCTGGCATGCAATGTGCATTTTGTTTCAAGGGCCTACATTTGGGACTTTAGGATCCATTGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR CAA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGAAATGTCCTGTATACTaGCATCAGGAAACAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLKCPVY*HQETDF Trigger: GAAATCTGTTTCCTGATGCAAGTATACAGGACATTT...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR GCA 72 bp | GCAAATGAACTGAGGTTAAAAGGCTTGTTTAAAACTTaGCTGGCACGCAAGGAAGGGAAAGATAGAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: ANELRLKGLFKT*LARKEGKDRGG Trigger: TCCACCTCTATCTTTCCCTTCCTTGCGTGCCAGGCAAGTTTTAAACAAGCCTTTTAACCTCAGTTCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR GCA 72 bp | AGTCCCAAATGTAGGCCCTTGAAACAAAATGCACATTaGATGCCAGAGTGGCTACAGTTGGTTATGTACAAA | + |
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Preference number: 3 (lower is better) Translates to: SPKCRPLKQNAH*MPEWLQLVMYK Trigger: TTTGTACATAACCAACTGTAGCCACTCTGGCATGCAATGTGCATTTTGTTTCAAGGGCCTACATTTGGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTGTACTTGCTATGTATGTTCAACAGTTTTGTACCTCTGAGCAAGAAAAGGTAGAGATCATAGCATaGCTTGCTGGCACCTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: FPVLAMYVQQFCTSEQEKVEIIA*LAGTFV Trigger: GACAAAGGTGCCAGCAAGCAATGCTATGATCTCTAC...CTTTTCTTGCTCAGAGGTACAAAACTGTTGAACATACATAGCAAGTACAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 72 bp | ACTGAAACTTCAGGGATACTGTGTCAATCAATGAAATaGCCAGTGAGGATGCAAGAACAGAACAGAGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: TETSGILCQSMK*PVRMQEQNRVK Trigger: TTTGACTCTGTTCTGTTCTTGCATCCTCACTGGCCATTTCATTGATTGACACAGTATCCCTGAAGTTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CCA 72 bp | AGGAAAAATATTTCAGGAAAGAAAACGGACGCTCTGTaGTTCAGAACCTTACTGAAATGTGTGCATACAAAA | + |
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Preference number: 3 (lower is better) Translates to: RKNISGKKTDAL*FRTLLKCVHTK Trigger: TTTTGTATGCACACATTTCAGTAAGGTTCTGAACCACAGAGCGTCCGTTTTCTTTCCTGAAATATTTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 72 bp | TGTAAAATCCCTAGGAACCTATCCCAGCTATCATGGTaGCTCTTGTATAAAGCTATATTCAGTAGTAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: CKIPRNLSQLSW*LLYKAIFSSSK Trigger: TTTACTACTACTGAATATAGCTTTATACAAGAGTCACCATGATAGCTGGGATAGGTTCCTAGGGATTTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR TCA 72 bp | AAATACTTCCAGATGAGAGAGAAATTATCCATTAGATaGAATGGTGTGGAGGACAAAACTGAGTATCTCATG | + |
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Preference number: 3 (lower is better) Translates to: KYFQMREKLSIR*NGVEDKTEYLM Trigger: CATGAGATACTCAGTTTTGTCCTCCACACCATTTCATCTAATGGATAATTTCTCTCTCATCTGGAAGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR GCA 72 bp | AACCATGCCAATGCTGTAAAACAGATCCCAAGGAAATaGTGCATTTTCAAGACAATCAATACTAAGCTTATT | + |
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Preference number: 3 (lower is better) Translates to: NHANAVKQIPRK*CIFKTINTKLI Trigger: AATAAGCTTAGTATTGATTGTCTTGAAAATGCAGCATTTCCTTGGGATCTGTTTTACAGCATTGGCATGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGCCACATGCGGTCCCCTaGGGAGCGGTAGGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLPHAVP*GAVGAA Trigger: AGCAGCACCTACCGCTCCGCAGGGGACCGCATGTGG...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR TCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGAGAGGACCAGGACGATaGCTCGGGTGGCAATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLRGPGR*LGWQSQ Trigger: TTGAGATTGCCACCCGAGTCATCGTCCTGGTCCTCT...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | GCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGGTGAAACGGAGCGGTAGGTGCTaGTCAAGTAGAGCGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: ACQSGYSWLCTKSLSEVKRSGRC*SSRAPP Trigger: CGGCGGCGCTCTACTTGAGCAGCACCTACCGCTCCG...TTTCACCTCACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | TGCACATTGCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGCAGCGTCAGCACCTaGCACATGCGGTCCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: CTLHARVATVGYVQKVLVSSVST*HMRSPA Trigger: CGCAGGGGACCGCATGTGGCAGGTGCTGACGCTGCT...CACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGCAATGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGGGAATGGGGAGCCACTaGACCAGAAAACGATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLGMGSH*TRKRSR Trigger: CCTGGATCGTTTTCTGGTGCAGTGGCTCCCCATTCC...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGTATGTTCTCAGGGAATaGGGAGCCACTGCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLYVLRE*GATAPE Trigger: TTCTGGTGCAGTGGCTCCCCATTCCCTGAGAACATA...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR TCA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGCGGCATAGAGTAAAGTaGGGAAGCAGAGCACGATGG | + |
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Preference number: 4 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLRHRVK*GSRARW Trigger: CCATCGTGCTCTGCTTCCTCACTTTACTCTATGCCG...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR TCA 90 bp | GCCGTGGGAACTCTTTCTTTCCTTCCACCATGTAGGCCCCAAGGATGGAAGTTGACCAGCAGAACATGTTaGTGCCGGCATAGAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: AVGTLSFLPPCRPQGWKLTSRTC*CRHRVK Trigger: CTTTACTCTATGCCGGCATCAACATGTTCTGCTGGT...CAACTTCCATCCTTGGGGCCTACATGGTGGAAGGAAAGAAAGAGTTCCCACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | AATTATAGGACAAGCCTGAATTATGAGGAGAATGAAGCCTACCTTCTGAGCAATCCGAGCTGGAGCAGGTaGATGAGCAGCGCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NYRTSLNYEENEAYLLSNPSWSR*MSSASG Trigger: CCCACTGGCGCTGCTCATGCACCTGCTCCAGCTCGG...ATTGCTCAGAAGGTAGGCTTCATTCTCCTCATAATTCAGGCTTGTCCTATAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | GAAATTGGAAATGGGTACCATCTCTCCCCTCAGTCACTGGAAAGCTTCAAGGAAGGCACACCTGAGAAGTaGCCTAAAGCTTTCCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: EIGNGYHLSPQSLESFKEGTPEK*PKAFRN Trigger: GTTTCGGAAAGCTTTAGGGCACTTCTCAGGTGTGCC...TTCCTTGAAGCTTTCCAGTGACTGAGGGGAGAGATGGTACCCATTTCCAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CCA 90 bp | TTCAGGGATACTGTGTCAATCAATGAAATGGCCAGTGAGGATGCAAGAACAGAAAGCTTGCCTTCTGCCTaGCCAACCTCTTTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FRDTVSINEMASEDARTESLPSA*PTSFST Trigger: GGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCT...TTCTGTTCTTGCATCCTCACTGGCCATTTCATTGATTGACACAGTATCCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | GCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGGTGAAAGTTGACGAGTATGACTaGCACCACCCAGATCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ACQSGYSWLCTKSLSEVKVDEYD*HHPDLQ Trigger: CTGAAGATCTGGGTGGTGGCAGTCATACTCGTCAAC...TTTCACCTCACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CCA 90 bp | TTCCCTGTACTTGCTATGTATGTTCAACAGTTTTGTACCTCTGAGCAAGAAAAGAGGCGGTACCAGTTCTaGGACTTGCTGATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FPVLAMYVQQFCTSEQEKRRYQF*DLLMSS Trigger: GGAGCTCATCAGCAAGTCCCAGAACTGGTACCGCCT...CTTTTCTTGCTCAGAGGTACAAAACTGTTGAACATACATAGCAAGTACAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| 3UTR CAA 72 bp | ACACCTGTCTTTATAAAGCGGGACCTGGGCGGGCCTTaGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TPVFIKRDLGGP*LCDSLSLLVSL Trigger: CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCGCTTTATAAAGACAGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR TCA 90 bp | TTCAGGGATACTGTGTCAATCAATGAAATGGCCAGTGAGGATGCAAGAACAGAATTGTCGATTTTCAGCTaGACAGCTGACCAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: FRDTVSINEMASEDARTELSIFS*TADQQN Trigger: GTTCTGCTGGTCAGCTGTTCAGCTGAAAATCGACAA...TTCTGTTCTTGCATCCTCACTGGCCATTTCATTGATTGACACAGTATCCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CCA 90 bp | TGCACATTGCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGAGCTTTCCGAAACACTaGAGGAGAAGAGCTTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CTLHARVATVGYVQKVLVSFPKH*RRRAFC Trigger: GCAAAAAGCTCTTCTCCTCCAGTGTTTCGGAAAGCT...CACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGCAATGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR TCA 90 bp | AATTATAGGACAAGCCTGAATTATGAGGAGAATGAAGCCTACCTTCTGAGCAATTTTCAGCTGAACAGCTaGCCAGCAGAACATGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: NYRTSLNYEENEAYLLSNFQLNS*PAEHVD Trigger: ATCAACATGTTCTGCTGGTCAGCTGTTCAGCTGAAA...ATTGCTCAGAAGGTAGGCTTCATTCTCCTCATAATTCAGGCTTGTCCTATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTACTTGCTATGTATGTTCAACAGTTTTGTACCTCTGAGCAAGAAAAGCCAGTAGTGATGTTCTaGTCCAAGACAGTTATATAC | + |
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Preference number: 4 (lower is better) Translates to: FPVLAMYVQQFCTSEQEKPVVMF*SKTVIY Trigger: GTATATAACTGTCTTGGAGCAGAACATCACTACTGG...CTTTTCTTGCTCAGAGGTACAAAACTGTTGAACATACATAGCAAGTACAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | GCAGCGTCAGCACCTGCCACATGCGGTCCCCTGCGGAGCGGTAGGTaGTGCTCAAGTAGAGCGCCGCCGCCGTCTCGGCCACGAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: AASAPATCGPLRSGR*CSSRAPPPSRPRTG Trigger: TCCTGTTCGTGGCCGAGACGGCGGCGGCGCTCTACTTGAGCAGCACCTACCGCTCCGCAGGGGACCGCATGTGGCAGGTGCTGACGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | GCGTCAGCACCTGCCACATGCGGTCCCCTGCGGAGCGGTAGGTGCTaGTCAAGTAGAGCGCCGCCGCCGTCTCGGCCACGAACAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: ASAPATCGPLRSGRC*SSRAPPPSRPRTGT Trigger: TGTTCCTGTTCGTGGCCGAGACGGCGGCGGCGCTCTACTTGAGCAGCACCTACCGCTCCGCAGGGGACCGCATGTGGCAGGTGCTGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 90 bp | AGGTGCATGAGCAGCGCCAGTGGGCGATCGCGGCTGAGGTCGCGGTaGACGAAGAGGAGCGTGAACTGCACCAGGGCGCAGGGCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: RCMSSASGRSRLRSR*TKRSVNCTRAQGIK Trigger: CTTGATGCCCTGCGCCCTGGTGCAGTTCACGCTCCTCTTCGTCCACCGCGACCTCAGCCGCGATCGCCCACTGGCGCTGCTCATGCACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 90 bp | GCCCGGCTGAATGCAGAACGGTGGGTAATCAGCTTGCCTTCTGCCTaGCCAACCTCTTTCTCCACCTCCTCTGAAAGGCCATCTTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: ARLNAERWVISLPSA*PTSFSTSSERPSFG Trigger: GCCAAAAGATGGCCTTTCAGAGGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATTCAGCCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 90 bp | CCTAGGAAAGCCTGTATCACTGATGCCCGGCTGAATGCAGAACGGTaGGTAATCAGCTTGCCTTCTGCCTGGCCAACCTCTTTCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: PRKACITDARLNAER*VISLPSAWPTSFST Trigger: GGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATTCAGCCGGGCATCAGTGATACAGGCTTTCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | GCTGGATTTTCTCCTCAGGGAGGACCAACAGGCACACCTGAGAAGTaGCCTAAAGCTTTCCGAAACACTGGAGGAGAAGAGCTTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: AGFSPQGGPTGTPEK*PKAFRNTGGEELFA Trigger: TGCAAAAAGCTCTTCTCCTCCAGTGTTTCGGAAAGCTTTAGGGCACTTCTCAGGTGTGCCTGTTGGTCCTCCCTGAGGAGAAAATCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS TCA 90 bp | AATCAGCTTGCCTTCTGCCTGGCCAACCTCTTTCTCCACCTCCTCTaGAAGGCCATCTTTTGGCATCTGTCGTTTCTTAGTGATGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: NQLAFCLANLFLHLL*KAIFWHLSFLSDAH Trigger: GTGAGCATCACTAAGAAACGACAGATGCCAAAAGATGGCCTTTCAGAGGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | TCAGTGGCCTCGGGGATCACTTTACTGGTAGTAGGCATTACATCTTaGTCTGTGCACGCCTTTAAGTCTGTGTCTATCCTTCCTACTGGC | + |
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Preference number: 5 (lower is better) Translates to: SVASGITLLVVGITS*SVHAFKSVSILPTG Trigger: GCCAGTAGGAAGGATAGACACAGACTTAAAGGCGTGCACAGAGCAAGATGTAATGCCTACTACCAGTAAAGTGATCCCCGAGGCCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CAA 90 bp | TGCACATTGCATGCCAGAGTGGCTACAGTTGGTTATGTACAAAAAGTCTTAGTGCGGTGGGTAATCAGCTaGCCTTCTGCCTGGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: CTLHARVATVGYVQKVLVRWVIS*PSAWPT Trigger: GGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCG...CACTAAGACTTTTTGTACATAACCAACTGTAGCCACTCTGGCATGCAATGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS-3UTR CAA 90 bp | CGGGACCTGGGCGGGCCTTTGTTGTGTGATAGTTTATCACTGCTAGTTAGTTTGGCCAGGGGTTTGACTTaGACCTCATACTCATCATAC | + |
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Preference number: 5 (lower is better) Translates to: RDLGGPLLCDSLSLLVSLARGLT*TSYSSY Trigger: GTATGATGAGTATGAGGTCAAAGTCAAACCCCTGGC...CAAACTAACTAGCAGTGATAAACTATCACACAACAAAGGCCCGCCCAGGTCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | AGCAGGGACAAGGTCATGATGAAGCATCTTCCAGTAGTGATGTTCTaGTCCAAGACAGTTATATACAGTTGTAGGGTCAGTTGTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRDKVMMKHLPVVMF*SKTVIYSCRVSCGA Trigger: TGCCCCACAACTGACCCTACAACTGTATATAACTGTCTTGGAGCAGAACATCACTACTGGAAGATGCTTCATCATGACCTTGTCCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 90 bp | AACACAAGCATGAAGAGAATGCCAGTGCAGTACCCAATAAGCAGCTaGAAGATCAACAGAGGCGCACACACATACATGTATATGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: NTSMKRMPVQYPISS*KINRGAHTYMYMSV Trigger: AACTGACATATACATGTATGTGTGTGCGCCTCTGTTGATCTTGCAGCTGCTTATTGGGTACTGCACTGGCATTCTCTTCATGCTTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | CCTGCCACATGCGGTCCCCTGCGGAGCGGTAGGTGCTaGTCAAGTAGAGCGCCGCCGCCGTCTCGGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: PATCGPLRSGRC*SSRAPPPSRPR Trigger: TCGTGGCCGAGACGGCGGCGGCGCTCTACTTGAGCAGCACCTACCGCTCCGCAGGGGACCGCATGTGGCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 72 bp | AGCAGCGCCAGTGGGCGATCGCGGCTGAGGTCGCGGTaGACGAAGAGGAGCGTGAACTGCACCAGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSASGRSRLRSR*TKRSVNCTRAQ Trigger: CTGCGCCCTGGTGCAGTTCACGCTCCTCTTCGTCCACCGCGACCTCAGCCGCGATCGCCCACTGGCGCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | GAAGAGCAGCGTCAGCACCTGCCACATGCGGTCCCCTaGGGAGCGGTAGGTGCTGCTCAAGTAGAGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: EEQRQHLPHAVP*GAVGAAQVERR Trigger: GCGGCGCTCTACTTGAGCAGCACCTACCGCTCCGCAGGGGACCGCATGTGGCAGGTGCTGACGCTGCTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 72 bp | CAAAAGACTTCACAACACCTGTACAGGGGCCCGAGCTaGAGCAGGTGCATGAGCAGCGCCAGTGGGCGATCG | + |
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Preference number: 6 (lower is better) Translates to: QKTSQHLYRGPS*SRCMSSASGRS Trigger: CGATCGCCCACTGGCGCTGCTCATGCACCTGCTCCAGCTCGGGCCCCTGTACAGGTGTTGTGAAGTCTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CAA 72 bp | GATGCCCGGCTGAATGCAGAACGGTGGGTAATCAGCTaGCCTTCTGCCTGGCCAACCTCTTTCTCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: DARLNAERWVIS*PSAWPTSFSTS Trigger: GGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATTCAGCCGGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 72 bp | GCCTGTATCACTGATGCCCGGCTGAATGCAGAACGGTaGGTAATCAGCTTGCCTTCTGCCTGGCCAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: ACITDARLNAER*VISLPSAWPTS Trigger: AGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATTCAGCCGGGCATCAGTGATACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CAA 90 bp | TGTATCACTGATGCCCGGCTGAATGCAGAACGGTGGGTAATCAGCTaGCCTTCTGCCTGGCCAACCTCTTTCTCCACCTCCTCTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: CITDARLNAERWVIS*PSAWPTSFSTSSER Trigger: CCTTTCAGAGGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATTCAGCCGGGCATCAGTGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 72 bp | AATGCAGAACGGTGGGTAATCAGCTTGCCTTCTGCCTaGCCAACCTCTTTCTCCACCTCCTCTGAAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NAERWVISLPSA*PTSFSTSSERP Trigger: TGGCCTTTCAGAGGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGCAAGCTGATTACCCACCGTTCTGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CCA 72 bp | CCTTTAAGTCTGTGTCTATCCTTCCTACTGGCTCGCTaGATTTTCTCCTCAGGGAGGACCAACAGGCACACC | + |
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Preference number: 6 (lower is better) Translates to: PLSLCLSFLLAR*IFSSGRTNRHT Trigger: GGTGTGCCTGTTGGTCCTCCCTGAGGAGAAAATCCAGCGAGCCAGTAGGAAGGATAGACACAGACTTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS TCA 72 bp | GCCTTCTGCCTGGCCAACCTCTTTCTCCACCTCCTCTaGAAGGCCATCTTTTGGCATCTGTCGTTTCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: AFCLANLFLHLL*KAIFWHLSFLS Trigger: ACTAAGAAACGACAGATGCCAAAAGATGGCCTTTCAGAGGAGGTGGAGAAAGAGGTTGGCCAGGCAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS TCA 72 bp | GACTTGCTGATGAGCTCCGGATTGTCGATTTTCAGCTaGACAGCTGACCAGCAGAACATGTTGATGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: DLLMSSGLSIFS*TADQQNMLMPA Trigger: TGCCGGCATCAACATGTTCTGCTGGTCAGCTGTTCAGCTGAAAATCGACAATCCGGAGCTCATCAGCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | GGGCCTTCTCTATGTTCTCAGGGAATGGGGAGCCACTaGACCAGAAAACGATCCAGGGATATAAGAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GPSLCSQGMGSH*TRKRSRDIRRS Trigger: GCTTCTTCTTATATCCCTGGATCGTTTTCTGGTGCAGTGGCTCCCCATTCCCTGAGAACATAGAGAAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CAA 90 bp | CTGCACCAGAAAACGATCCAGGGATATAAGAAGAAGCTGAAGAAGTaGACGAGTATGACTGCCACCACCCAGATCTTCAGGACAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LHQKTIQGYKKKLKK*TSMTATTQIFRTEV Trigger: TACCTCTGTCCTGAAGATCTGGGTGGTGGCAGTCATACTCGTCAACTTCTTCAGCTTCTTCTTATATCCCTGGATCGTTTTCTGGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | ATGAAGAGAATGCCAGTGCAGTACCCAATAAGCAGCTaGAAGATCAACAGAGGCGCACACACATACATGTAT | + |
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Preference number: 6 (lower is better) Translates to: MKRMPVQYPISS*KINRGAHTYMY Trigger: ATACATGTATGTGTGTGCGCCTCTGTTGATCTTGCAGCTGCTTATTGGGTACTGCACTGGCATTCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | TCGGGGATCACTTTACTGGTAGTAGGCATTACATCTTaGTCTGTGCACGCCTTTAAGTCTGTGTCTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: SGITLLVVGITS*SVHAFKSVSIL Trigger: AAGGATAGACACAGACTTAAAGGCGTGCACAGAGCAAGATGTAATGCCTACTACCAGTAAAGTGATCCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS CAA 72 bp | GCCAGGGGTTTGACTTTGACCTCATACTCATCATACTaGATTTTGATGGCTAAGATGTTGCAACGTAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: ARGLTLTSYSSY*ILMAKMLQRKA Trigger: CGCCTTACGTTGCAACATCTTAGCCATCAAAATCAAGTATGATGAGTATGAGGTCAAAGTCAAACCCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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| CDS GCA 72 bp | AAGGTCATGATGAAGCATCTTCCAGTAGTGATGTTCTaGTCCAAGACAGTTATATACAGTTGTAGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KVMMKHLPVVMF*SKTVIYSCRVS Trigger: ACTGACCCTACAACTGTATATAACTGTCTTGGAGCAGAACATCACTACTGGAAGATGCTTCATCATGACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015486.7 |
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