Pregenerated sensors for XIRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079243Ensembl transcript IDs: ENSMUST00000111635.4, ENSMUST00000213113.2, ENSMUST00000238557.3
Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCCCTCGAAGAGCTTCCGCAGGGCCTGCACATCCACGCTGCGAGATaGTTCCTTCTCCAGGGTTTGCACTTGGCTCAGGAGGCCCTGGAG | + |
Preference number: 1 (lower is better) Translates to: ALEELPQGLHIHAAR*FLLQGLHLAQEALE Trigger: CTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | CCCATGACTCAGTCCTGGGGGAGCTCTGGGAGAGGTACCCAAGACTaGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTTGT | + |
Preference number: 1 (lower is better) Translates to: PMTQSWGSSGRGTQD*WETEGLTGQPGGSC Trigger: ACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAGCTCCCCCAGGACTGAGTCATGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | CATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTaGGTCTGCGTGCTGGGTGATGGTGGTGGAGGAAGTGAGGACTGT | + |
Preference number: 1 (lower is better) Translates to: HGRSVQAELGSGVRQ*VCVLGDGGGGSEDC Trigger: ACAGTCCTCACTTCCTCCACCACCATCACCCAGCACGCAGACCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 90 bp | GCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGTGGAGTAACTaGCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGG | + |
Preference number: 1 (lower is better) Translates to: ASARSLLSLEGLWSN*LSMGEVCRQSWGLG Trigger: CCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TCTCCAGCCTCCTGGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGG | + |
Preference number: 1 (lower is better) Translates to: SPASWRAGRSLLPGL*PLRDFSSCPQDGSR Trigger: CCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TACCTGGCTCACCTGGCTTATGGTCTTGTCCTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCTTGGGCAGCCTCTGAGGTGGGTGGA | + |
Preference number: 1 (lower is better) Translates to: YLAHLAYGLVLLLRL*QSLLRAWAASEVGG Trigger: TCCACCCACCTCAGAGGCTGCCCAAGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCCAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TGCAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTGGGTCTGCGTGCTaGGTGATGGTGGTGGAGGAAGTGAGGACTGTATTCCCAAATTGG | + |
Preference number: 1 (lower is better) Translates to: CRQSWGLGSVSGSAC*VMVVEEVRTVFPNW Trigger: CCAATTTGGGAATACAGTCCTCACTTCCTCCACCACCATCACCCAGCACGCAGACCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | CCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTGGCCTGCTATTGTaGGAGCTTTGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTG | + |
Preference number: 1 (lower is better) Translates to: PWSFQPEAGSPGLLL*ELCLTLGWLYLAHL Trigger: CAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | GCTTTGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTGGCTTATaGTCTTGTCCTGCTTCTGAGGCTCTGGCAGAGCCTGCTAAGGGC | + |
Preference number: 1 (lower is better) Translates to: ALSDPGLAIPGSPGL*SCPASEALAEPAKG Trigger: GCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | GGTTGCTTCTGGCCCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTaGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTTGGCTATA | + |
Preference number: 1 (lower is better) Translates to: GCFWPLELSARGRQS*PAIVGALSDPGLAI Trigger: TATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTaGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGG | + |
Preference number: 1 (lower is better) Translates to: YPRLVGDRGAHWAAG*KLLQGVHVISASAR Trigger: CCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | CTCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTaGGCAGCCGGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCA | + |
Preference number: 1 (lower is better) Translates to: LWERYPRLVGDRGAH*AAGWKLLQGVHVIS Trigger: TGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | GATGTGCAGGTTTGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATaGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGACCCTTCAGGGG | + |
Preference number: 1 (lower is better) Translates to: DVQVWEALGVSFLEA*WIPLWRVLSLTLQG Trigger: CCCCTGAAGGGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAACCTGCACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | CACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTaGCTATGGAGGGACACAGTGCAGGGTGACCCTCCAGCTCTAGGC | + |
Preference number: 1 (lower is better) Translates to: HQGLRQPDSITKEKG*LWRDTVQGDPPALG Trigger: GCCTAGAGCTGGAGGGTCACCCTGCACTGTGTCCCTCCATAGCCAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 90 bp | TGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTaGGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGCATGGGAGAAG | + |
Preference number: 1 (lower is better) Translates to: CYRESMLSQLLPGHC*AWRGCGVTALAWEK Trigger: CTTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTAAGAGCCTTGTGCACTGCTTCTTCG | + |
Preference number: 1 (lower is better) Translates to: SFVVPCGWLLVGASD*RLDMELRALCTASS Trigger: CGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 90 bp | CTGCTCGGTCACTGTTCTCATGGCTCCATAGGACTTGGAGGTAGTTaGCCCAGTCTGGAATTCCAGAACATTCTTTGGCTGCCCTGTGAG | + |
Preference number: 1 (lower is better) Translates to: LLGHCSHGSIGLGGS*PSLEFQNILWLPCE Trigger: CTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAACTACCTCCAAGTCCTATGGAGCCATGAGAACAGTGACCGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | ACTGAGACCTTGTTCACACTGGGATCTTTTGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCAGACTGGAGGCTAGACATGGAGCTA | + |
Preference number: 1 (lower is better) Translates to: TETLFTLGSFVVPCG*LLVGASDWRLDMEL Trigger: TAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAAGGTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 90 bp | TGCTGGGTGATGGTGGTGGAGGAAGTGAGGACTGTATTCCCAAATTaGTCCATCTCCTCATACTGCTCGGTCACTGTTCTCATGGCTCCA | + |
Preference number: 1 (lower is better) Translates to: CWVMVVEEVRTVFPN*SISSYCSVTVLMAP Trigger: TGGAGCCATGAGAACAGTGACCGAGCAGTATGAGGAGATGGACCAATTTGGGAATACAGTCCTCACTTCCTCCACCACCATCACCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGGCAGGACGTTCACTaGTGCCTGGCCTCTGGCCTC | + |
Preference number: 2 (lower is better) Translates to: SGRGTQDWWETEGLTGQPGQDVH*CLASGL Trigger: GAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCGGGGCCTGCTGGATaGAGTCCTCCTGGTGGTGGC | + |
Preference number: 2 (lower is better) Translates to: PPALGNEVQAHMCECELGPGPAG*SPPGGG Trigger: GCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGAGCATGGGAGAAGTGTaGAGGCAGAGCTGGGGTCTG | + |
Preference number: 2 (lower is better) Translates to: SGRGTQDWWETEGLTGQPSMGEV*RQSWGL Trigger: CAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGAGACTCGGGGCTCTaGCTGTTGCTGCTGGTTATC | + |
Preference number: 2 (lower is better) Translates to: SGRGTQDWWETEGLTGQPGDSGL*LLLLVI Trigger: GATAACCAGCAGCAACAGCCAGAGCCCCGAGTCTCC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | CTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTaGGCTCAGGAGGCCCTGGAGCTCCTGATGGCTGCCCTGTGGACT | + |
Preference number: 2 (lower is better) Translates to: LHIHAARCFLLQGLH*AQEALELLMAALWT Trigger: AGTCCACAGGGCAGCCATCAGGAGCTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTA | + |
Preference number: 2 (lower is better) Translates to: SGRGTQDWWETEGLTGQPVGASD*RLDMEL Trigger: TAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCAC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | GCTAGGCCTGGAAGCCATAGAGCTGAGTGGACGCTGATGAGCAGGTaGCTTCTGGCCCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTG | + |
Preference number: 2 (lower is better) Translates to: ARPGSHRAEWTLMSR*LLALGAFSQRQAVL Trigger: CAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCTTCCAGGCCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTCTTTGGCTGCCCTGTaGGCACAGCGCCCTCGATGC | + |
Preference number: 2 (lower is better) Translates to: QGVHVISASARSLLSLEGSLAAL*AQRPRC Trigger: GCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGAGCTAAGAGCCTTGTaGACTGCTTCTTCGATGTCC | + |
Preference number: 2 (lower is better) Translates to: SGRGTQDWWETEGLTGQPELRAL*TASSMS Trigger: GGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | CTTTCAGCCAGAGGCAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTaGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTGGCTTATGG | + |
Preference number: 2 (lower is better) Translates to: LSARGRQSWPAIVGA*SDPGLAIPGSPGLW Trigger: CCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | AGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTaGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTG | + |
Preference number: 2 (lower is better) Translates to: RLVGDRGAHWAAGWK*LQGVHVISASARSL Trigger: CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGCCATAGAGCTGAGTaGACGCTGATGAGCAGGTTG | + |
Preference number: 2 (lower is better) Translates to: GPAHPRCEMLPSPGFALGSHRAE*TLMSRL Trigger: CAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAGTGGGTCTGCGTGCTaGGTGATGGTGGTGGAGGAA | + |
Preference number: 2 (lower is better) Translates to: QGVHVISASARSLLSLEGSGSAC*VMVVEE Trigger: TTCCTCCACCACCATCACCCAGCACGCAGACCCACT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | CTTGTGGGAGCCTCAGACTGGAGGCTAGACATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATGTCCAGCAGCCTGGCTAGGGTCTGT | + |
Preference number: 2 (lower is better) Translates to: LVGASDWRLDMELRA*CTASSMSSSLARVC Trigger: ACAGACCCTAGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGATGTCTGACCCTGGGTTaGCTATACCTGGCTCACCTG | + |
Preference number: 2 (lower is better) Translates to: SSLARVCSFSWATSVLTRCLTLG*LYLAHL Trigger: CAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACA...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGTGTCTCCAGCCTCCTaGAGGGCAGGACGTTCACTG | + |
Preference number: 2 (lower is better) Translates to: EAGTRVFLEPLVQSQTESVSPAS*RAGRSL Trigger: CAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGACAC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTCCTGGTGGTGGCCTTaGGTTGGGTGGTCAGGATCT | + |
Preference number: 2 (lower is better) Translates to: SVLSAGQPLYSPESVPQRSWWWP*VGWSGS Trigger: AGATCCTGACCACCCAACTCAAGGCCACCACCAGGA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCAGGACGTTCACTGCTaGCTGGCCTCTGGCCTCTGC | + |
Preference number: 2 (lower is better) Translates to: GSSPGIKAARFHNQRKRLQDVHC*LASGLC Trigger: GCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGGCTCCGGGGCCTGCTaGATGGAGTCCTCCTGGTGG | + |
Preference number: 2 (lower is better) Translates to: GLEASGSFFVADWTEMKVGSGAC*MESSWW Trigger: CCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCCAAAGGCCTGCTCCATaGAGGCCTCAGTCATGTGGG | + |
Preference number: 2 (lower is better) Translates to: EAGTRVFLEPLVQSQTESQRPAP*RPQSCG Trigger: CCCACATGACTGAGGCCTCCATGGAGCAGGCCTTTG...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGTCTTGTCCTGCTTCTaGGGCTCTGGCAGAGCCTGC | + |
Preference number: 2 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTVLSCF*GSGRAC Trigger: GCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGAC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGTTCCCCAAAGGCCTaGTCCATGGAGGCCTCAGTC | + |
Preference number: 2 (lower is better) Translates to: GWKLLQGVHVISASARSLSSPKA*SMEASV Trigger: GACTGAGGCCTCCATGGAGCAGGCCTTTGGGGAACT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAAGAGCCTTGTGCACTaGTTCTTCGATGTCCAGCAG | + |
Preference number: 2 (lower is better) Translates to: QGVHVISASARSLLSLEGKSLVH*FFDVQQ Trigger: CTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGGGGGTTTCTTTCTTaGAAGCATGGTGGATTCCGC | + |
Preference number: 2 (lower is better) Translates to: QGVHVISASARSLLSLEGWGFLS*KHGGFR Trigger: GCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | GAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTaGCTCAGCCCCGGGTCCTCACCAGGGATTAAGGCAGCCAGATTC | + |
Preference number: 2 (lower is better) Translates to: EPLVQSQTESSVMSS*LSPGSSPGIKAARF Trigger: GAATCTGGCTGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAGGCCCTGGAGCTCCTaGTGGCTGCCCTGTGGACTC | + |
Preference number: 2 (lower is better) Translates to: LCPDLGVYFSLRYNGFPERPWSS*WLPCGL Trigger: GAGTCCACAGGGCAGCCATCAGGAGCTCCAGGGCCT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCT | + |
Preference number: 2 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTLLLRL*QSLLRA Trigger: AGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTACTCCCCCTCCCAGCTaGGGTACGCCCTCGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSTPPPS*GTPSKS Trigger: GCTCTTCGAGGGCGTACCCCAGCTGGGAGGGGGAGT...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | TTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTGACCTGGCTGGAGCTTGTCTGTATG | + |
Preference number: 2 (lower is better) Translates to: FLILSSGWLSAFSWV*TRGGSLTWLELVCM Trigger: CATACAGACAAGCTCCAGCCAGGTCAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR CAA 90 bp | TTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTaGAGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGCATGGGAGAA | + |
Preference number: 2 (lower is better) Translates to: LLQGVHVISASARSL*SLEGLWSNCLSMGE Trigger: TTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR-3UTR GCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGGGAGCTCCTGATGGCTaGCCTGTGGACTCTCAGGGG | + |
Preference number: 2 (lower is better) Translates to: LCPDLGVYFSLRYNGFPEGAPDG*PVDSQG Trigger: CCCCTGAGAGTCCACAGGGCAGCCATCAGGAGCTCC...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGGCTCACCTGGCTTATaGTCTTGTCCTGCTTCTGAG | + |
Preference number: 2 (lower is better) Translates to: GWKLLQGVHVISASARSLGSPGL*SCPASE Trigger: CTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGTGTGCAGGCAGAGCTaGGGTCTGGGGTCCGTCAGT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSVCRQS*GLGSVS Trigger: ACTGACGGACCCCAGACCCCAGCTCTGCCTGCACAC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 90 bp | TGTCCCTCCCATCCGGCTTTCCTGTGGATGGCTGCTTTATGTTTCTaGCCTCTTTTCCAAGAACTAACAAGGCAAACAGCCCTCGTGAGC | + |
Preference number: 2 (lower is better) Translates to: CPSHPAFLWMAALCF*PLFQELTRQTALVS Trigger: GCTCACGAGGGCTGTTTGCCTTGTTAGTTCTTGGAAAAGAGGCAAGAAACATAAAGCAGCCATCCACAGGAAAGCCGGATGGGAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR-3UTR GCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGTCCGTCAGTGGGTCTaGGTGCTGGGTGATGGTGGT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSVRQWV*VLGDGG Trigger: ACCACCATCACCCAGCACGCAGACCCACTGACGGAC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGGTTTGGGAGGCACTaGGGGTTTCTTTCTTGGAAG | + |
Preference number: 2 (lower is better) Translates to: GWKLLQGVHVISASARSLRFGRH*GFLSWK Trigger: CTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAACCT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTAGCCTGCTAAGGGCTTaGGCAGCCTCTGAGGTGGGT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSSLLRA*AASEVG Trigger: ACCCACCTCAGAGGCTGCCCAAGCCCTTAGCAGGCT...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACGATGTCCAGCAGCCTaGCTAGGGTCTGTTCTTTCA | + |
Preference number: 2 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTRCPAA*LGSVLS Trigger: TGAAAGAACAGACCCTAGCCAGGCTGCTGGACATCG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCA | + |
Preference number: 2 (lower is better) Translates to: KLLQGVHVISASARSLLSVVPCG*LLVGAS Trigger: TGAGGCTCCCACAAGCAGCCATCCACAGGGAACTAC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCA | + |
Preference number: 2 (lower is better) Translates to: GLEASGSFFVADWTEMKVLLPGL*PLRDFS Trigger: TGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACGGTCACTGTTCTCATaGCTCCATAGGACTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTRSLFS*LHRTWR Trigger: CCTCCAAGTCCTATGGAGCCATGAGAACAGTGACCG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTCCTTCTCCAGGGTTTaGACTTGGCTCAGGAGGCCC | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSSFSRV*TWLRRP Trigger: GGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGAGAGGAGGATCCTGTaGAGGGAGGAGAGACTTGTA | + |
Preference number: 2 (lower is better) Translates to: KLLQGVHVISASARSLLSERRIL*REERLV Trigger: TACAAGTCTCTCCTCCCTGCACAGGATCCTCCTCTC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATTAGATGTGCAGGTTTaGGAGGCACTGGGGGTTTCT | + |
Preference number: 2 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTLDVQV*EALGVS Trigger: AGAAACCCCCAGTGCCTCCCAAACCTGCACATCTAA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAGAGGCAGGCAGTCCTaGCCTGCTATTGTGGGAGCT | + |
Preference number: 2 (lower is better) Translates to: LCPDLGVYFSLRYNGFPERGRQS*PAIVGA Trigger: AGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGTTGCTTCTGGCCCTTaGAGCTTTCAGCCAGAGGCA | + |
Preference number: 2 (lower is better) Translates to: GLEASGSFFVADWTEMKVVASGP*SFQPEA Trigger: TGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAAC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGTGTGTATTTTTCCCTaGGATATAATGGCTTCCCTG | + |
Preference number: 2 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGVCIFP*DIMASL Trigger: CAGGGAAGCCATTATATCTCAGGGAAAAATACACAC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGTTCTTTGTAGCTGATTaGACTGAGATGAAAGTTGGA | + |
Preference number: 2 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGFFVAD*TEMKVG Trigger: TCCAACTTTCATCTCAGTCCAATCAGCTACAAAGAA...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR TCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTGGTGGTGGAGGAAGTaGGGACTGTATTCCCAAATT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSWWWRK*GLYSQI Trigger: AATTTGGGAATACAGTCCTCACTTCCTCCACCACCA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR GCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTGTTATCTCAGCTTCTaGCAGGTCACTGTTGAGCCT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSCYLSF*QVTVEP Trigger: AGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTCTTGGAAGCATGGTaGATTCCGCTTTGGAGGGTT | + |
Preference number: 2 (lower is better) Translates to: VFLEPLVQSQTESSVMSSFLEAW*IPLWRV Trigger: AACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GGCCAGGCTCGGCTCCTCTCAGTGTCTCCAGCCTCCTaGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTGG | + |
Preference number: 3 (lower is better) Translates to: GQARLLSVSPAS*RAGRSLLPGLW Trigger: CCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGACACTGAGAGGAGCCGAGCCTGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | CAGTCCTGGGGGAGCTCTGGGAGAGGTACCCAAGACTaGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGT | + |
Preference number: 3 (lower is better) Translates to: QSWGSSGRGTQD*WETEGLTGQPG Trigger: ACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAGCTCCCCCAGGACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | AGCTGGGGTACGCCCTCGAAGAGCTTCCGCAGGGCCTaGACATCCACGCTGCGAGATGCTTCCTTCTCCAGG | + |
Preference number: 3 (lower is better) Translates to: SWGTPSKSFRRA*TSTLRDASFSR Trigger: CCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGGGCGTACCCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | GGGCTGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTaGAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTGGG | + |
Preference number: 3 (lower is better) Translates to: GLWSNCLSMGEV*RQSWGLGSVSG Trigger: CCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | GAGCTTCCGCAGGGCCTGCACATCCACGCTGCGAGATaGTTCCTTCTCCAGGGTTTGCACTTGGCTCAGGAG | + |
Preference number: 3 (lower is better) Translates to: ELPQGLHIHAAR*FLLQGLHLAQE Trigger: CTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | CCTCGAAGAGCTTCCGCAGGGCCTGCACATCCACGCTaGGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGC | + |
Preference number: 3 (lower is better) Translates to: PRRASAGPAHPR*EMLPSPGFALG Trigger: GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 72 bp | GGAGACTCGGGGCTCTGGCTGTTGCTGCTGGTTATCTaGCCCCTGCTAGGCCTGGAAGCCATAGAGCTGAGT | + |
Preference number: 3 (lower is better) Translates to: GDSGLWLLLLVI*PLLGLEAIELS Trigger: ACTCAGCTCTATGGCTTCCAGGCCTAGCAGGGGTCAGATAACCAGCAGCAACAGCCAGAGCCCCGAGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | CACCTGGCTTATGGTCTTGTCCTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCTTGGGCAGCCTCTGAG | + |
Preference number: 3 (lower is better) Translates to: HLAYGLVLLLRL*QSLLRAWAASE Trigger: CTCAGAGGCTGCCCAAGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | CTGACCCCTGCTAGGCCTGGAAGCCATAGAGCTGAGTaGACGCTGATGAGCAGGTTGCTTCTGGCCCTTGGA | + |
Preference number: 3 (lower is better) Translates to: LTPARPGSHRAE*TLMSRLLLALG Trigger: TCCAAGGGCCAGAAGCAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCTTCCAGGCCTAGCAGGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | AGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTaGGCAGCCGGGTGGAAGTTGTTACAGGGAGTCCAT | + |
Preference number: 3 (lower is better) Translates to: RYPRLVGDRGAH*AAGWKLLQGVH Trigger: ATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCGCTTTGGAGGGTTTaGTCTCTGACCCTTCAGGGG | + |
Preference number: 3 (lower is better) Translates to: PPALGNEVQAHMCECELGPLWRV*SLTLQG Trigger: CCCCTGAAGGGTCAGAGACAAAACCCTCCAAAGCGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCTGTGGATGGCTGCTaGTGGGAGCCTCAGACTGGA | + |
Preference number: 3 (lower is better) Translates to: CGVTALAWEKCAGRAGVWPVDGC*WEPQTG Trigger: TCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 72 bp | CAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTTGTCTaGCCCTGGGTTGGCTATACCTGGCTCACCTGGCTT | + |
Preference number: 3 (lower is better) Translates to: QAVLACYCGSFV*PWVGYTWLTWL Trigger: AAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | TCCTGGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCATCTTGTCCTCAGGAT | + |
Preference number: 3 (lower is better) Translates to: SWRAGRSLLPGL*PLRDFSSCPQD Trigger: ATCCTGAGGACAAGATGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | CTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTaGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCT | + |
Preference number: 3 (lower is better) Translates to: LVGDRGAHWAAG*KLLQGVHVISA Trigger: AGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GAGCCTTGTGCACTGCTTCTTCGATGTCCAGCAGCCTaGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTG | + |
Preference number: 3 (lower is better) Translates to: EPCALLLRCPAA*LGSVLSAGQPL Trigger: CAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTAAGAGCCTTGTGCACT | + |
Preference number: 3 (lower is better) Translates to: VPCGWLLVGASD*RLDMELRALCT Trigger: AGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGAGCTATTGTGCTTTaGTGGTGGGCTGGAGTCATT | + |
Preference number: 3 (lower is better) Translates to: PPALGNEVQAHMCECELGGAIVL*WWAGVI Trigger: AATGACTCCAGCCCACCACAAAAGCACAATAGCTCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | GTTGACCCAGTCTGGAATTCCAGAACATTCTTTGGCTaGCCTGTGAGCACAGCGCCCTCGATGCACATCTCC | + |
Preference number: 3 (lower is better) Translates to: VDPVWNSRTFFG*PVSTAPSMHIS Trigger: GGAGATGTGCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTTaGCTATACCTGGCTCACCTGGCTTATGGTCTTGTC | + |
Preference number: 3 (lower is better) Translates to: GLLLWELCLTLG*LYLAHLAYGLV Trigger: GACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 72 bp | CAGTCTGGAATTCCAGAACATTCTTTGGCTGCCCTGTaGGCACAGCGCCCTCGATGCACATCTCCTTTGTCC | + |
Preference number: 3 (lower is better) Translates to: QSGIPEHSLAAL*AQRPRCTSPLS Trigger: GGACAAAGGAGATGTGCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | GAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTaGCAGGTCACTGTTGAGCCTGGAGGGGCTGTGGAG | + |
Preference number: 3 (lower is better) Translates to: EVVTGSPCYLSF*QVTVEPGGAVE Trigger: CTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR GCA 72 bp | TCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTaGTCAGCCCCGGGTCCTCACCAGGGATTAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: SNLKQRAVSCPV*SAPGPHQGLRQ Trigger: CTGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GACCTTGTTCACACTGGGATCTTTTGTAGTTCCCTGTaGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCT | + |
Preference number: 3 (lower is better) Translates to: DLVHTGIFCSSL*MAACGSLRLEA Trigger: AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGGTGGTGGCCTTGAGTaGGGTGGTCAGGATCTTCTG | + |
Preference number: 3 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTGGGLE*GGQDLL Trigger: CAGAAGATCCTGACCACCCAACTCAAGGCCACCACC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCCTGGGGGTTTCTTTCTaGGAAGCATGGTGGATTCCG | + |
Preference number: 3 (lower is better) Translates to: EAGTRVFLEPLVQSQTESLGVSF*EAWWIP Trigger: CGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAG...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATTCCTTCTCCAGGGTTaGCACTTGGCTCAGGAGGCC | + |
Preference number: 3 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTFLLQG*HLAQEA Trigger: GGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
||
3UTR CCA 72 bp | TGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATGGTaGATTCCGCTTTGGAGGGTTTTGTCTCTGACCCTT | + |
Preference number: 3 (lower is better) Translates to: WEALGVSFLEAW*IPLWRVLSLTL Trigger: AAGGGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | GTTTGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATaGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGACC | + |
Preference number: 3 (lower is better) Translates to: VWEALGVSFLEA*WIPLWRVLSLT Trigger: GGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | TTGTTCACACTGGGATCTTTTGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCAGACTGGAGGCTAGAC | + |
Preference number: 3 (lower is better) Translates to: LFTLGSFVVPCG*LLVGASDWRLD Trigger: GTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTTAGATGTGCAGGTTaGGGAGGCACTGGGGGTTTC | + |
Preference number: 3 (lower is better) Translates to: GSSPGIKAARFHNQRKRLLRCAG*GGTGGF Trigger: GAAACCCCCAGTGCCTCCCAAACCTGCACATCTAAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTCCAGGGTTTGCACTaGGCTCAGGAGGCCCTGGAG | + |
Preference number: 3 (lower is better) Translates to: VFLEPLVQSQTESSVMSSLQGLH*AQEALE Trigger: CTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTG | + |
Preference number: 3 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTAFSWV*TRGGSL Trigger: CAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | TCAGGTCCTGTCCCTCCCATCCGGCTTTCCTGTGGATaGCTGCTTTATGTTTCTTGCCTCTTTTCCAAGAAC | + |
Preference number: 3 (lower is better) Translates to: SGPVPPIRLSCG*LLYVSCLFSKN Trigger: GTTCTTGGAAAAGAGGCAAGAAACATAAAGCAGCCATCCACAGGAAAGCCGGATGGGAGGGACAGGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CCA 72 bp | TTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTaGCTATGGAGGGACACAGTGCAGGGTGACCCTCCA | + |
Preference number: 3 (lower is better) Translates to: LRQPDSITKEKG*LWRDTVQGDPP Trigger: TGGAGGGTCACCCTGCACTGTGTCCCTCCATAGCCAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 72 bp | CTGGCTGGAGCTTGTCTGTATGGCTCTGCTACTGACTaGGACCTTGTTCACACTGGGATCTTTTGTAGTTCC | + |
Preference number: 3 (lower is better) Translates to: LAGACLYGSATD*DLVHTGIFCSS Trigger: GGAACTACAAAAGATCCCAGTGTGAACAAGGTCTCAGTCAGTAGCAGAGCCATACAGACAAGCTCCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR TCA 72 bp | CACTGTTCTCATGGCTCCATAGGACTTGGAGGTAGTTaGCCCAGTCTGGAATTCCAGAACATTCTTTGGCTG | + |
Preference number: 3 (lower is better) Translates to: HCSHGSIGLGGS*PSLEFQNILWL Trigger: CAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAACTACCTCCAAGTCCTATGGAGCCATGAGAACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATG | + |
Preference number: 3 (lower is better) Translates to: GLEASGSFFVADWTEMKVMELRA*CTASSM Trigger: CATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCAT...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR-3UTR CAA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGGACTGTATTCCCAAATaGGTCCATCTCCTCATACTG | + |
Preference number: 3 (lower is better) Translates to: GSSPGIKAARFHNQRKRLDCIPK*VHLLIL Trigger: CAGTATGAGGAGATGGACCAATTTGGGAATACAGTC...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGCAGGCCCTGGCAGCGTaGGTGGGTGGAGCTGGAGCT | + |
Preference number: 4 (lower is better) Translates to: SGRGTQDWWETEGLTGQPQALAA*VGGAGA Trigger: AGCTCCAGCTCCACCCACTCACGCTGCCAGGGCCTG...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGGGTCACCAGGCCCTaGCAGCGTGAGTGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGRVTRP*QREWVE Trigger: CTCCACCCACTCACGCTGCCAGGGCCTGGTGACCCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGCAGCCGGCCTCTCGTaGTCGCCAATGGCATCTAGC | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGAAGLS*SPMASS Trigger: GCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGCTGGGGTCCTGGTTaGAGGCATCCAGAGGTCGGG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGGWGPG*RHPEVG Trigger: CCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGACAGAAGTCAGGGCATaGAGCTGTCCCCTGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: SGRGTQDWWETEGLTGQPTEVRA*SCPLLS Trigger: GGACAGCAGGGGACAGCTTCATGCCCTGACTTCTGT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACAGACCCTCTGGGGCTaGGGGATGAGGGAGGGACAG | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRQTLWG*GMREGQ Trigger: CTGTCCCTCCCTCATCCCTCAGCCCCAGAGGGTCTG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCGGAGCTCACTGGCTTaGCGCTGCTGCTGGAACTTG | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGRSSLA*RCCWNL Trigger: CAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCGGCTGCTGTCTCCTaGCTCTCTGGTGTCCCATGG | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGSAAVS*LSGVPW Trigger: CCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCACAGGCCAGCAGCTaGTGGAGCTCAGGGTCCATG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGPQASS*WSSGSM Trigger: CATGGACCCTGAGCTCCAGCAGCTGCTGGCCTGTGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGACGCCGGAGCTCACTaGCTTGCCGCTGCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: CGVTALAWEKCAGRAGVWDAGAH*LAAAAG Trigger: TCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTC...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGLGQEG*DPEMAG Trigger: TCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCCACCCGTTGCAGGTaGCCCACTTGGACCTGGTCT | + |
Preference number: 4 (lower is better) Translates to: CGVTALAWEKCAGRAGVWPTRCR*PTWTWS Trigger: AGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGAGAGCCACCGAGTGGTaGCGACATCCCCAGCCACCA | + |
Preference number: 4 (lower is better) Translates to: CGVTALAWEKCAGRAGVWRATEW*RHPQPP Trigger: TGGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCT...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAGGATGCCTCCATGGTaGAGGATGCCGGGGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGRMPPW*RMPGVA Trigger: TGCCACCCCCGGCATCCTGCACCATGGAGGCATCCT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTGTGTTGCCTCCTCCTaGCCTCTCAGCGCATCCAGT | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGCVASS*PLSASS Trigger: ACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCACCTCCTCCTTGGGTaGCACCTCTGCCTCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGHLLLG*HLCLCF Trigger: GAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTGAGTGGGTGGAGCTaGAGCTGCCCAGCTGTGTCC | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRVSGWS*SCPAVS Trigger: GGACACAGCTGGGCAGCTCCAGCTCCACCCACTCAC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCAGGCCAGCAGCTGCTaGAGCTCAGGGTCCATGTCT | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGQASSC*SSGSMS Trigger: AGACATGGACCCTGAGCTCCAGCAGCTGCTGGCCTG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTCCAGCTGCCCGAGATaGAGGTGGGCAGGGTGTGGA | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGSSCPR*RWAGCG Trigger: TCCACACCCTGCCCACCTCCATCTCGGGCAGCTGGA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGGGTCAGAGCCCTGTaGATGCCTGCTCAGAACCTG | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGRVRAL*MPAQNL Trigger: CAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGACAGGCATGGAGGTaGCTACAGGGTCAGAGCCCT | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGGQAWR*LQGQSP Trigger: AGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGCCCTCGGGCCTCCATaGGGATGCCTCCATGGTGCA | + |
Preference number: 4 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGALGPP*GCLHGA Trigger: TGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGTCCGGCGCAGCACTTaGCGGACGATCCTGGGAAGC | + |
Preference number: 4 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGVRRST*RTILGS Trigger: GCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGAC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGAGCCAGGTGAATTTATaGACAGAGCCTGTGGGGATG | + |
Preference number: 4 (lower is better) Translates to: SGRGTQDWWETEGLTGQPSQVNL*TEPVGM Trigger: CATCCCCACAGGCTCTGTGCATAAATTCACCTGGCT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGSPVDA*SEPAGA Trigger: TGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCT...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCCACATCGATGGTACTaGGGCTTCTACCCAGCGTGT | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGPHRWY*GFYPAC Trigger: ACACGCTGGGTAGAAGCCCCAGTACCATCGATGTGG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCCCTGCCCTGGGCTTaGGAGCACATACTTGGCAAG | + |
Preference number: 4 (lower is better) Translates to: CGVTALAWEKCAGRAGVWPLPWA*EHILGK Trigger: CTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTATGATGCTCTCAGTTaGGGGGACCCTCTGGGACTC | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGYDALS*GDPLGL Trigger: GAGTCCCAGAGGGTCCCCCCAACTGAGAGCATCATA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTCACTGGCTTGCCGCTaGTGCTGGAACTTGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGSLACR*CWNLEK Trigger: CTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGAC | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGWRRFL*GVVAAD Trigger: GTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGGGGCGCCCCTGCCCTaGGCTTGGGAGCACATACTT | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLGAPLP*AWEHIL Trigger: AAGTATGTGCTCCCAAGCCCAGGGCAGGGGCGCCCC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | AGAGGCAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTaGTCTGACCCTGGGTTGGCTATACCTGGCTCACCT | + |
Preference number: 4 (lower is better) Translates to: RGRQSWPAIVGA*SDPGLAIPGSP Trigger: AGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | GGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTaGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCC | + |
Preference number: 4 (lower is better) Translates to: GDRGAHWAAGWK*LQGVHVISASA Trigger: GGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCTTGGACCTGGTCTCTaGAAGCATCCAGGGGTTTTG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGLGPGL*KHPGVL Trigger: CAAAACCCCTGGATGCTTTCAGAGACCAGGTCCAAG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCATGGTTGTCTGTGTTaGCTCCTCCTGGCCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: CGVTALAWEKCAGRAGVWHGCLC*LLLASQ Trigger: CTGAGAGGCCAGGAGGAGGCAACACAGACAACCATG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGCTCCATGGTGCAGGATaGCGGGGGTGGCATGCAAAG | + |
Preference number: 4 (lower is better) Translates to: SVLSAGQPLYSPESVPQRLHGAG*RGWHAK Trigger: CTTTGCATGCCACCCCCGGCATCCTGCACCATGGAG...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCCCTGTCCTGTCTCTTaGATCACCAGCCCCGTCTTT | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGPCPVS*ITSPVF Trigger: AAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCAGCTTTCTGGGGAATaGTGGGATCCTGGCTTCACT | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGQLSGE*WDPGFT Trigger: AGTGAAGCCAGGATCCCAGCATTCCCCAGAAAGCTG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: GPAHPRCEMLPSPGFALGVDHLQ*LRLKEP Trigger: TGGCTCTTTGAGACGCAGCCATTGGAGATGATCCAC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAG | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLKTELP*PSGLHE Trigger: CTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTTGGGAGCACATACTTaGCAAGACAGAGCTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGLGAHT*QDRAPL Trigger: CAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGGAATGCTGGGATCCTaGCTTCACTTCCAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRGMLGS*LHFQPQ Trigger: CTGTGGCTGGAAGTGAAGCCAGGATCCCAGCATTCC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | GCCTCAGACTGGAGGCTAGACATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATGTCCAGCAGCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: ASDWRLDMELRA*CTASSMSSSLA Trigger: AGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTCGCCCTTCAGCTCCTaGATCTCTGAGCGCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: SVLSAGQPLYSPESVPQRSPFSS*ISERSS Trigger: AGAGCTGCGCTCAGAGATTCAGGAGCTGAAGGGCGA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTTCTGGGGGACACCCTaGGACAGAGGCAACACCGAA | + |
Preference number: 4 (lower is better) Translates to: SVLSAGQPLYSPESVPQRFWGTP*DRGNTE Trigger: TTCGGTGTTGCCTCTGTCTCAGGGTGTCCCCCAGAA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACCCACTGGATTGGTTTaGGGCTGGCAGAGATTCAGT | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRPTGLV*GWQRFS Trigger: ACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTTGTCCCCTGCTGTCCTaGATAGCATATACCGGGGCG | + |
Preference number: 4 (lower is better) Translates to: IFCSSLWMAACGSLRLEACPLLS*IAYTGA Trigger: CGCCCCGGTATATGCTATGCAGGACAGCAGGGGACA...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTTCAGAGCCCTGTGGATaGCTGCTCAGAACCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: IFCSSLWMAACGSLRLEASEPCG*LLRTCW Trigger: CCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGA...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGGCAGGAGTGGATGCTTaGAGAACATCTTGGACAGGC | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGAGVDA*RTSWTG Trigger: GCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGC...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGGCTGCTGCTGGAACTTaGAGAAGGTTTCTTTGGGGG | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGAAAGT*RRFLWG Trigger: CCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGC...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATC | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGLMLNI*ARRDEI Trigger: GATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTCTCCAGCCGGAACCTaGCTGGTTTGCAGGTGCTGC | + |
Preference number: 4 (lower is better) Translates to: LCVISHLVLRMALGLFLGSPAGT*LVCRCC Trigger: GCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCAGGCTTTCTCCCACTaGATTGGTTTGAGGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGQAFSH*IGLRLA Trigger: TGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | TTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTGACCTGGCTGGAGCTT | + |
Preference number: 4 (lower is better) Translates to: LSSGWLSAFSWV*TRGGSLTWLEL Trigger: AAGCTCCAGCCAGGTCAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | GGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTaGAGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: GVHVISASARSL*SLEGLWSNCLS Trigger: GCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTCCCACCGCAAACTGTaGAGGCTGTGCAGGTCTCCT | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLSHRKL*RLCRSP Trigger: AGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGA...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGTCCTTCTGGTCTTCCTaGGGCTGCCTTCCCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGSFWSS*GCLPFL Trigger: CAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGA...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAAGGTGGCCTGGACGTTaGCACCTGACACAGGTTCCC | + |
Preference number: 4 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTRWPGR*HLTQVP Trigger: GGGAACCTGTGTCAGGTGGCAACGTCCAGGCCACCT...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTC | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRASRPH*IALNLL Trigger: GAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGCTCACCCTGCCCAATaGTGTCTAAGGGAAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: EAGTRVFLEPLVQSQTESAHPAQ*CLREGS Trigger: AGACCCTTCCCTTAGACAGCATTGGGCAGGGTGAGC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTAAGGGTTCTCTCGGCTaGTGTCTCCTGCCTCTCTGG | + |
Preference number: 4 (lower is better) Translates to: LCVISHLVLRMALGLFLGKGSLG*CLLPLW Trigger: CCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTT...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTTGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCC | + |
Preference number: 4 (lower is better) Translates to: GGFFLGSMVDSALEGFVSCLLRT*WCRLWA Trigger: GGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCA...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTCTGCCAGGGAGCCCATaGGACAGTTTTCAAAGAGCC | + |
Preference number: 4 (lower is better) Translates to: IFCSSLWMAACGSLRLEALPGSP*DSFQRA Trigger: GGCTCTTTGAAAACTGTCCCATGGGCTCCCTGGCAG...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAATGAGGATGCCTCCATaGTGCAGGATGCCGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTMRMPP*CRMPGV Trigger: CACCCCCGGCATCCTGCACCATGGAGGCATCCTCAT...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGAGGTGGGCAGGGTGTaGATCCTGAGATTCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGEVGRV*ILRFSA Trigger: AGCTGAGAATCTCAGGATCCACACCCTGCCCACCTC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAA | + |
Preference number: 4 (lower is better) Translates to: LCVISHLVLRMALGLFLGCWCRL*ASAVAK Trigger: TTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | TGGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTaGGCTATACCTGGCTCACCTGGCTTATGGTCTTGT | + |
Preference number: 4 (lower is better) Translates to: WPAIVGALSDPG*AIPGSPGLWSC Trigger: ACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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3UTR CAA 72 bp | GTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTaGCTCAGCCCCGGGTCCTCACCAGGGATTAAGGCA | + |
Preference number: 4 (lower is better) Translates to: VQSQTESSVMSS*LSPGSSPGIKA Trigger: TGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGC | + |
Preference number: 4 (lower is better) Translates to: GSSPGIKAARFHNQRKRLIQRIH*TSPSVG Trigger: GCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGAT...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCCAGCTGTGTCCTCCTaGACCAGCAGTCCCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVPAVSS*TSSPCW Trigger: CCAGCAGGGACTGCTGGTTCAGGAGGACACAGCTGG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGCAGGGTGTGGATCCTaGGATTCTCAGCTGCCCCAT | + |
Preference number: 4 (lower is better) Translates to: GGFFLGSMVDSALEGFVSAGCGS*DSQLPH Trigger: ATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGC...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGCTTGGGTGGCACCTCTaGCTCTGTTTCTCTTTCACC | + |
Preference number: 4 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGLGWHL*LCFSFT Trigger: GGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAG...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACC | + |
Preference number: 4 (lower is better) Translates to: GSSPGIKAARFHNQRKRLPATTS*RVIPRT Trigger: GGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGCCCAAACATCCAGGTaGAGGACTGTGTCTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLAQTSR*RTVSQP Trigger: AGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGGAACCTGGCTGGTTTaGAGGTGCTGCTCCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSGTWLV*RCCSPE Trigger: CTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTGGTGTCCCATGGCCTaGAGAGCCTTTTGGCTGTTC | + |
Preference number: 4 (lower is better) Translates to: LCVISHLVLRMALGLFLGWCPMA*RAFWLF Trigger: GAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGGCGCATCCAGTGGCTTaGTCTCAAACATCTGTCTGG | + |
Preference number: 4 (lower is better) Translates to: SVLSAGQPLYSPESVPQRAHPVA*SQTSVW Trigger: CCAGACAGATGTTTGAGACCAAGCCACTGGATGCGC...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTCTCAAAGAGCTTTCTaGTTCCCTGTACATCTCCAG | + |
Preference number: 4 (lower is better) Translates to: PPALGNEVQAHMCECELGSQRAF*FPVHLQ Trigger: CTGGAGATGTACAGGGAACCAGAAAGCTCTTTGAGA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGACCTGGCTGGGGTCCTaGTTGAAGGCATCCAGAGGT | + |
Preference number: 4 (lower is better) Translates to: GSSPGIKAARFHNQRKRLTWLGS*LKASRG Trigger: ACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGT...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGATCCGGAGATGGCTaGAAGTCCTTCTCGTCCACC | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLRSGDG*KSFSST Trigger: GGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTC | + |
Preference number: 4 (lower is better) Translates to: IFCSSLWMAACGSLRLEADEIRR*LEVLLV Trigger: GACGAGAAGGACTTCCAGCCATCTCCGGATCTCATC...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGAT | + |
Preference number: 4 (lower is better) Translates to: QGVHVISASARSLLSLEGFLPLD*FEAGRD Trigger: ATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: GSSPGIKAARFHNQRKRLLSGVP*PAEPFG Trigger: GCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACCTTTCTGCCCAGCATaGCTGATATCCGTTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: SSLARVCSFSWATSVLTRPFCPA*LISVFF Trigger: GAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGCTGGACGTTGCCACCTaGCACAGGTTCCCTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LCPDLGVYFSLRYNGFPELDVAT*HRFPGS Trigger: GCTGCCAGGGAACCTGTGTCAGGTGGCAACGTCCAG...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGGAGGTTGTCCCCTCTaGTGCTCTCAGCTGCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSGGCPL*CSQLPG Trigger: CCCTGGCAGCTGAGAGCATCAGAGGGGACAACCTCC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTAGCTCTAAAGGACTCTaGTCCTGGATAGAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: GGFFLGSMVDSALEGFVSSSKGL*SWIEGR Trigger: CCGCCCCTCTATCCAGGAGCAGAGTCCTTTAGAGCT...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGCTGAAGGCTCACCCTaGCCAATGCTGTCTAAGGGA | + |
Preference number: 4 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTAEGSP*PMLSKG Trigger: TCCCTTAGACAGCATTGGGCAGGGTGAGCCTTCAGC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: GGFFLGSMVDSALEGFVSGLLCL*SWPAAA Trigger: TGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACC...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTCAGAACCTGCTGGTaGAGGCTTTGGGCCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVLRTCW*RLWASA Trigger: CGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGCTTGCCGCTGCTGCTaGAACTTGGAGAAGGTTTCT | + |
Preference number: 4 (lower is better) Translates to: GWKLLQGVHVISASARSLACRCC*NLEKVS Trigger: AGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCCTCGGCATCCTGGATaGCGCATAGAGGTTCCGTCT | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSPRHPG*RIEVPS Trigger: AGACGGAACCTCTATGCGCCATCCAGGATGCCGAGG...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTCTCGTACCACATCGATaGTACTGGGGCTTCTACCCA | + |
Preference number: 4 (lower is better) Translates to: LCVISHLVLRMALGLFLGLVPHR*YWGFYP Trigger: TGGGTAGAAGCCCCAGTACCATCGATGTGGTACGAG...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCTGTCTCCTGCCTCTCTaGTGTCCCATGGCCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSCLLPL*CPMACR Trigger: TCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACA...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGCTTGCCGCTGCTaGTGGAACTTGGAGAAGGTT | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSLACRC*WNLEKV Trigger: AACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAG...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCCAGCAGCTGCACACTaGTTCTTTCAGGGGCCCTGC | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSPAAAH*FFQGPC Trigger: GCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACA | + |
Preference number: 4 (lower is better) Translates to: SVLSAGQPLYSPESVPQRFFLAS*NGAWAT Trigger: TGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAAAGGACTCTGCTCCTaGATAGAGGGGCGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: LCPDLGVYFSLRYNGFPEKGLCS*IEGREP Trigger: GGGCTCCCGCCCCTCTATCCAGGAGCAGAGTCCTTT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGAATCACCTCCTCCTTaGGTGGCACCTCTGCCTCTG | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVESPPP*VAPLPL Trigger: CAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSAGFRD*GPNIQV Trigger: CACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCATAGAGGTTCCGTCTaGAACAGCTTCACCGTCTTC | + |
Preference number: 4 (lower is better) Translates to: GSSPGIKAARFHNQRKRLHRGSV*NSFTVF Trigger: GAAGACGGTGAAGCTGTTTCAGACGGAACCTCTATG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCAGCTGGCCAGCAGCTaGACACTGCTTCTTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSQLASS*TLLLSG Trigger: CCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTACCTGCTCTCTGCTaGCAGAAGTCAGGGCATGAA | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVLPALC*QKSGHE Trigger: TTCATGCCCTGACTTCTGTCAGCAGAGAGCAGGTAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAG | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSNADSA*LPGDLE Trigger: CTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTT...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTCACTGCATTGCTTTaGATCTCCTCCCGACAGGCA | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSLTALL*ISSRQA Trigger: TGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAA | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVWKTSF*RDTCPE Trigger: TTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCA...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR GCA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTG | + |
Preference number: 4 (lower is better) Translates to: GGFFLGSMVDSALEGFVSIRFLP*FLQWSL Trigger: CAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGAT...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCC | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVSQTSV*QLGHHP Trigger: GGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGA...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCTGTTGCTCTTGTTGGTaGATCATCTCCAATGGCTGC | + |
Preference number: 4 (lower is better) Translates to: KLLQGVHVISASARSLLSCCSCW*IISNGC Trigger: GCAGCCATTGGAGATGATCCACCAACAAGAGCAACA...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGCCTGCAGAGCCTTTTaGCTGTTCTTCCTGGAGGTT | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSACRAF*LFFLEV Trigger: AACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGGCTTGCAGAACATCTTaGACAGGCATGGAGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: LCPDLGVYFSLRYNGFPEACRTS*TGMEVA Trigger: AGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGC...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTTTCTGGGGAATGCTaGGATCCTGGCTTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSLSGEC*DPGFTS Trigger: GGAAGTGAAGCCAGGATCCCAGCATTCCCCAGAAAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCCTCATTTGGATGGTTaGTGTAGGAGCTACCTGCAT | + |
Preference number: 4 (lower is better) Translates to: GLEASGSFFVADWTEMKVPHLDG*CRSYLH Trigger: ATGCAGGTAGCTCCTACACCAACCATCCAAATGAGG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTTGGCTGTTCTTCCTaGAGGTTGTCCCCTCTGATG | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSFGCSS*RLSPLM Trigger: CATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR TCA 90 bp | GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTTCAAAGAGCCAGGTaGATTTATGCACAGAGCCTG | + |
Preference number: 4 (lower is better) Translates to: VFLEPLVQSQTESSVMSSFQRAR*IYAQSL Trigger: CAGGCTCTGTGCATAAATTCACCTGGCTCTTTGAAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS GCA 90 bp | CAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTaGAGGATGCCGGGGGTGGCATGCAAAGTCCGAAGGGTTCTCTCG | + |
Preference number: 5 (lower is better) Translates to: QSSPGPRASMRMPPW*RMPGVACKVRRVLS Trigger: CGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCCGGGACCTCCTTCTaGCCCGCCTCCAGGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: GPAHPRCEMLPSPGFALGSGTSF*PASRAW Trigger: CCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS CCA 90 bp | AGACAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATaGTGCAGGATGCCGGGGGTGGCATGCAAAGTCCGAAGGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: RQSSPGPRASMRMPP*CRMPGVACKVRRVL Trigger: GAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CTGCCCTGGGCTTGGGAGCACATACTTGGCAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTGCAGGATGCC | + |
Preference number: 5 (lower is better) Translates to: LPWAWEHILGKTELP*PSGLHEDASMVQDA Trigger: GGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | CAAGGGAGATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTTaGAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGACC | + |
Preference number: 5 (lower is better) Translates to: QGRSPESPAPGWGPG*RHPEVGSQRASEQT Trigger: GGTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCA | + |
Preference number: 5 (lower is better) Translates to: GQAWRWLQGQSPVDA*SEPAGAGFGPQRLP Trigger: TGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GCTCACTGGCTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGACCCTCTGGGGCTGAGGGATGAGGGA | + |
Preference number: 5 (lower is better) Translates to: AHWLAAAAGTWRRFL*GVVAADPLGLRDEG Trigger: TCCCTCATCCCTCAGCCCCAGAGGGTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CCTGCTGGTCCACGTCTGTCCGGCGCAGCACTTGACGGACGATCCTaGGAAGCTCACCACACACCAGCTCCTCCTTCCGTATGTAGGGGC | + |
Preference number: 5 (lower is better) Translates to: PAGPRLSGAALDGRS*EAHHTPAPPSVCRG Trigger: GCCCCTACATACGGAAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | AGGGGCTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTaGGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGTA | + |
Preference number: 5 (lower is better) Translates to: RGSGACWMESSWWWP*VGWSGSSVTAAGRV Trigger: TACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS GCA 90 bp | GGGACCTCCTTCTTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAAGGAATCTCCACCCGGCTGCAGTAC | + |
Preference number: 5 (lower is better) Translates to: GTSFLPASRAWKTSF*RDTCPEGISTRLQY Trigger: GTACTGCAGCCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GCCTCCATGAGGATGCCTCCATGGTGCAGGATGCCGGGGGTGGCATaGAAAGTCCGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCT | + |
Preference number: 5 (lower is better) Translates to: ASMRMPPWCRMPGVA*KVRRVLSAAVSCLS Trigger: AGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CCTGGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCCCTGATGGCCGGAGTCCCTCCGGCT | + |
Preference number: 5 (lower is better) Translates to: PGLSAHPVAWSQTSV*QLGHHPLMAGVPPA Trigger: AGCCGGAGGGACTCCGGCCATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTTaGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGTAGGAGG | + |
Preference number: 5 (lower is better) Translates to: LRGLLDGVLLVVALS*VVRIFCHSSWESRR Trigger: CCTCCTACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS TCA 90 bp | TGGGAGTGCAGGCTGGCACCTGCTGGTTTAGATGTCAGGGTGTGGTaGGTTAGAGGGGCAGTCTTCAGGGAGGTGTCTGCTGCCCGGAGG | + |
Preference number: 5 (lower is better) Translates to: WECRLAPAGLDVRVW*VRGAVFREVSAARR Trigger: CCTCCGGGCAGCAGACACCTCCCTGAAGACTGCCCCTCTAACTCACCACACCCTGACATCTAAACCAGCAGGTGCCAGCCTGCACTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS GCA 90 bp | TCTGTCTGCCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTaGTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGGGGCCCAAAC | + |
Preference number: 5 (lower is better) Translates to: SVCLSPAGTWLVCRC*SPEPSAGFRDWGPN Trigger: GTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTC | + |
Preference number: 5 (lower is better) Translates to: EVATGSEPCGCLLRT*WCRLWASAVAKRRF Trigger: GAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | TCTTGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATaGCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTT | + |
Preference number: 5 (lower is better) Translates to: SWTGMEVATGSEPCG*LLRTCWCRLWASAV Trigger: AACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GCCAGTTCTCAAAGATCCAGCGCATACACTGAACATCGCCCTCAGTaGGCTCCTCCGAACCGAGGACCTCCGCCAGGTCCTCAGCCACAG | + |
Preference number: 5 (lower is better) Translates to: ASSQRSSAYTEHRPQ*APPNRGPPPGPQPQ Trigger: CTGTGGCTGAGGACCTGGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | CCAATGGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGCTCCTCCGAACCGAGGACCTCCGCC | + |
Preference number: 5 (lower is better) Translates to: PMASSRQFSKIQRIH*TSPSVGSSEPRTSA Trigger: GGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | GCAGGTCCAGAACTTGGGTCTGTTGGCGGCTCCCACCGCAAACTGTaGAGGCTGTGCAGGTCTCCTTTGTCTATGCAGCTGGCCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: AGPELGSVGGSHRKL*RLCRSPLSMQLASS Trigger: GCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GCTCCCACCGCAAACTGTGAAGGCTGTGCAGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCACACTGCTTCTTTCAGGGGCCCTGC | + |
Preference number: 5 (lower is better) Translates to: APTANCEGCAGLLCL*SWPAAAHCFFQGPC Trigger: GCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | ATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTaGCAAACGCAGATTCTGCATGGCTTCCTGGAGATCTGGAGCCCC | + |
Preference number: 5 (lower is better) Translates to: MPAQNLLVQALGLSG*QTQILHGFLEIWSP Trigger: GGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTaGAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATG | + |
Preference number: 5 (lower is better) Translates to: ATGSEPCGCLLRTCW*RLWASAVAKRRFCM Trigger: CATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CGGAACCTGGCTGGTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTaGGTTCAGAGATTGGGGCCCAAACATCCAGGTGCAGGACTGTGT | + |
Preference number: 5 (lower is better) Translates to: RNLAGLQVLLPRAFC*VQRLGPKHPGAGLC Trigger: ACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGGTTGTCCCCT | + |
Preference number: 5 (lower is better) Translates to: RRVLSAAVSCLSGVP*PAEPFGCSSWRLSP Trigger: AGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAA | + |
Preference number: 5 (lower is better) Translates to: GAGFGPQRLPNADSA*LPGDLEPQTLEGKQ Trigger: TTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: SEPCGCLLRTCWCRL*ASAVAKRRFCMASW Trigger: CCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCTGGTGACCCACCCGTaGCAGGTGACCCACTTGGAC | + |
Preference number: 5 (lower is better) Translates to: CGVTALAWEKCAGRAGVWLVTHP*QVTHLD Trigger: GTCCAAGTGGGTCACCTGCAACGGGTGGGTCACCAG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCGGAACCTGGCTGGTTaGCAGGTGCTGCTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: QGVHVISASARSLLSLEGRNLAG*QVLLPR Trigger: TCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAG | + |
Preference number: 5 (lower is better) Translates to: QGVHVISASARSLLSLEGCPAQH*TDDPGK Trigger: CTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGCCCTGTCCTGTCTCTaGCATCACCAGCCCCGTCTT | + |
Preference number: 5 (lower is better) Translates to: PPALGNEVQAHMCECELGALSCL*HHQPRL Trigger: AAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS GCA 90 bp | ACATGTCTGTCTGTCTGCCTGTCTCCAGCCGGAACCTGGCTGGTTTaGAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGG | + |
Preference number: 5 (lower is better) Translates to: TCLSVCLSPAGTWLV*RCCSPEPSAGFRDW Trigger: CCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGACAGACATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | TTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTGCCGAGATACCTaGCCGGAAGGAATCTCCACCCGGCTGCAGTACCTTACAGGCTTT | + |
Preference number: 5 (lower is better) Translates to: LPASRAWKTSFCRDT*PEGISTRLQYLTGF Trigger: AAAGCCTGTAAGGTACTGCAGCCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: VCRCCSPEPSAGFRD*GPNIQVQDCVSALL Trigger: GAGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TTGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCTCCAGGGCCTaGAAAACCTCTTTCTGCCGAGATACCTGCCCGGAAGGAATCTCC | + |
Preference number: 5 (lower is better) Translates to: LIVVSGTSFLPASRA*KTSFCRDTCPEGIS Trigger: GGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GACCCTCTGGGACTCCTCAGTAGCAGGTCCAGAACTTGGGTCTGTTaGCGGCTCCCACCGCAAACTGTGAAGGCTGTGCAGGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: DPLGLLSSRSRTWVC*RLPPQTVKAVQVSF Trigger: AAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCCCAGAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TGGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATaGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTGCCCAG | + |
Preference number: 5 (lower is better) Translates to: WLPGDLEPQTLEGKQ*FLLVFLRLPSLSAQ Trigger: CTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTTGGACAGGCATaGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAA | + |
Preference number: 5 (lower is better) Translates to: PQWQEWMLAEHLGQA*RWLQGQSPVDACSE Trigger: TTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGCTCTTCTGTCCTCATTaGGATGGTTGGTGTAGGAGC | + |
Preference number: 5 (lower is better) Translates to: SGRGTQDWWETEGLTGQPLFCPH*DGWCRS Trigger: GCTCCTACACCAACCATCCAAATGAGGACAGAAGAG...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCA | + |
Preference number: 5 (lower is better) Translates to: GPAHPRCEMLPSPGFALGSWLSV*PPPGLS Trigger: TGAGAGGCCAGGAGGAGGCAACACAGACAACCATGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCAGGTTCCCTCATGGTaGTCTGTGTTGCCTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: GPAHPRCEMLPSPGFALGQVPSW*SVLPPP Trigger: AGGAGGAGGCAACACAGACAACCATGAGGGAACCTG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS TCA 90 bp | GCAGCTTGGACATCACCCCCTGATGGCCGGAGTCCCTCCGGCTCCTaGTCTGAGCTGTTGGTAAAGGAGCCTTCCTCAAACTTTCGAGAG | + |
Preference number: 5 (lower is better) Translates to: AAWTSPPDGRSPSGS*SELLVKEPSSNFRE Trigger: CTCTCGAAAGTTTGAGGAAGGCTCCTTTACCAACAGCTCAGATCAGGAGCCGGAGGGACTCCGGCCATCAGGGGGTGATGTCCAAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | CAGACCTCACTGCATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTaGCTTCGTGGATGGTGCCCTCGGCATCCTGGATGGCGCATAGAG | + |
Preference number: 5 (lower is better) Translates to: QTSLHCFESPPDRQP*LRGWCPRHPGWRIE Trigger: CTCTATGCGCCATCCAGGATGCCGAGGGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 90 bp | GCTGGGATCCTGGCTTCACTTCCAGCCACAGGCCTGATGCTGCCTTaGGTAACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTTGG | + |
Preference number: 5 (lower is better) Translates to: AGILASLPATGLMLP*VTPVAGVDACRTSW Trigger: CCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGCAGCATCAGGCCTGTGGCTGGAAGTGAAGCCAGGATCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTGACTTCGTG | + |
Preference number: 5 (lower is better) Translates to: GIQRSGLKEPASRPH*IALNLLPTGSLDFV Trigger: CACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | TCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACCACATCGATGGTACTGGGGCTTCTA | + |
Preference number: 5 (lower is better) Translates to: SKSHRVVPTSPATTS*RVIPRTTSMVLGLL Trigger: TAGAAGCCCCAGTACCATCGATGTGGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TCCGAAGCTCAGGGTGGATGTGTTTGTAGAGACGCCGGAGCTCACTaGCTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTGGGGG | + |
Preference number: 5 (lower is better) Translates to: SEAQGGCVCRDAGAH*LAAAAGTWRRFLWG Trigger: CCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTCTCTACAAACACATCCACCCTGAGCTTCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CACCTGACACAGGTTCCCTGGCAGCCGGCCTCTCGTGATCGCCAATaGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTGAA | + |
Preference number: 5 (lower is better) Translates to: HLTQVPWQPASRDRQ*HLAASSQRSSAYTE Trigger: TTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGCCAGGGAACCTGTGTCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GAAGGACCACTTTTCCAGCTGCCCGAGATGGAGGTGGGCAGGGTGTaGATCCTGAGATTCTCAGCTGCCCCATCTCCATGGTGGAGTCTA | + |
Preference number: 5 (lower is better) Translates to: EGPLFQLPEMEVGRV*ILRFSAAPSPWWSL Trigger: TAGACTCCACCATGGAGATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGCCCACCTCCATCTCGGGCAGCTGGAAAAGTGGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTaGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATGGTTCCT | + |
Preference number: 5 (lower is better) Translates to: LWASAVAKRRFCMAS*RSGAPDPRGEAMVP Trigger: AGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GTGGTGGCCTTGAGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTaGGAGAGTAGGAGGGGGAGGAACAGAGGCATTATGGGAGTGCAG | + |
Preference number: 5 (lower is better) Translates to: VVALSWVVRIFCHSS*ESRRGRNRGIMGVQ Trigger: CTGCACTCCCATAATGCCTCTGTTCCTCCCCCTCCTACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGAGGTGGCCTGGACGTaGCCACCTGACACAGGTTCC | + |
Preference number: 5 (lower is better) Translates to: CTSPLSQPDPGYLSGRAGEVAWT*PPDTGS Trigger: GGAACCTGTGTCAGGTGGCAACGTCCAGGCCACCTC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACC | + |
Preference number: 5 (lower is better) Translates to: EAGTRVFLEPLVQSQTESGMDPR*IVVSGT Trigger: GGTCCCGGAGACCACAATCAACCTGGGGTCCATCCC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGGCCTGCAGAGCCTTTaGGCTGTTCTTCCTGGAGGT | + |
Preference number: 5 (lower is better) Translates to: SSLARVCSFSWATSVLTRGLQSL*AVLPGG Trigger: ACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS TCA 90 bp | ACACTATTGACTGCTAGTGCGCTCTCTGCGCCAGAAGTCAGGGCATaGAGCTGTCCCCTGCTGTCCTGCATAGCATATACCGGGGCGTCA | + |
Preference number: 5 (lower is better) Translates to: TLLTASALSAPEVRA*SCPLLSCIAYTGAS Trigger: TGACGCCCCGGTATATGCTATGCAGGACAGCAGGGGACAGCTTCATGCCCTGACTTCTGGCGCAGAGAGCGCACTAGCAGTCAATAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213113.2 |
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CDS GCA 90 bp | AGAGCGGACATCGCCAGGAATCACCTCCTCCTTGGGTGGCACCTCTaGCTCTGTTTCTCTTTCACCCTTCAGAGTGTCCAGGGAACAGGT | + |
Preference number: 5 (lower is better) Translates to: RADIARNHLLLGWHL*LCFSFTLQSVQGTG Trigger: ACCTGTTCCCTGGACACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | TCCTCTGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATGGCTaGGTCTCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGCCACC | + |
Preference number: 5 (lower is better) Translates to: SSGFCCSCWWIISNG*VSKSHRVVPTSPAT Trigger: GGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TTGTCTGTGTTGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTTaGTCTCAAACATCTGTCTGGCAGCTTGGACATCACCCCCTGATG | + |
Preference number: 5 (lower is better) Translates to: LSVLPPPGLSAHPVA*SQTSVWQLGHHPLM Trigger: CATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TCGCTGATGCTGAACATCTGGGCCAGGAGGGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTCCACCTCGATCTCACGAATGGCATC | + |
Preference number: 5 (lower is better) Translates to: SLMLNIWARRDEIRR*LEVLLVHLDLTNGI Trigger: GATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CCAGAGTGTAGAGCGGACATCGCCAGGAATCACCTCCTCCTTGGGTaGCACCTCTGCCTCTGTTTCTCTTTCACCCTTCAGAGTGTCCAG | + |
Preference number: 5 (lower is better) Translates to: PECRADIARNHLLLG*HLCLCFSFTLQSVQ Trigger: CTGGACACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCTACACTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCGCTGCTGCTGGAACTaGGAGAAGGTTTCTTTGGGG | + |
Preference number: 5 (lower is better) Translates to: CGVTALAWEKCAGRAGVWRCCWN*EKVSLG Trigger: CCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGCCGGAGCTCACTGGCTaGCCGCTGCTGCTGGAACTT | + |
Preference number: 5 (lower is better) Translates to: GWKLLQGVHVISASARSLPELTG*PLLLEL Trigger: AAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGG...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTGCCCCTGCCCTGGGCTaGGGAGCACATACTTGGCAA | + |
Preference number: 5 (lower is better) Translates to: LCVISHLVLRMALGLFLGAPALG*GAHTWQ Trigger: TTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGGC...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGAGGCCTGATGCTGCCTaGAGTAACCCCAGTGGCAGG | + |
Preference number: 5 (lower is better) Translates to: SVLSAGQPLYSPESVPQRRPDAA*SNPSGR Trigger: CCTGCCACTGGGGTTACTCAAGGCAGCATCAGGCCT...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS GCA 90 bp | TTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCTaGCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTGCTCC | + |
Preference number: 5 (lower is better) Translates to: FEAGRDSVSKTCLSV*LSPAGTWLVCRCCS Trigger: GGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | TTCCTCCTCTGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGC | + |
Preference number: 5 (lower is better) Translates to: FLLWFLLLLLVDHLQ*LRLKEPPSGADIPS Trigger: GCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CCTGGACCCTTCCCCTCTTCCTCCTCTGGTTTCTGTTGCTCTTGTTaGTGGATCATCTCCAATGGCTGCGTCTCAAAGAGCCACCGAGTG | + |
Preference number: 5 (lower is better) Translates to: PGPFPSSSSGFCCSC*WIISNGCVSKSHRV Trigger: CACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAAGAGGGGAAGGGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAAGCGCATCCAGTGGCTaGGTCTCAAACATCTGTCTG | + |
Preference number: 5 (lower is better) Translates to: SSLARVCSFSWATSVLTRSASSG*VSNICL Trigger: CAGACAGATGTTTGAGACCAAGCCACTGGATGCGCT...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGG | + |
Preference number: 5 (lower is better) Translates to: GGFFLGSMVDSALEGFVSWLGSW*KASRGR Trigger: CCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCA...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTGGAATCACCTCCTCCTaGGGTGGCACCTCTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: LCVISHLVLRMALGLFLGGITSS*GGTSAS Trigger: AGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCC...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGACTGTGTCTCAGCCTaGCTCACGGGGTCTGTGACC | + |
Preference number: 5 (lower is better) Translates to: GWKLLQGVHVISASARSLDCVSA*LTGSVT Trigger: GGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTGCTGGTGCAGGCTTaGGGCCTCAGCGGTTGCCAA | + |
Preference number: 5 (lower is better) Translates to: GSSPGIKAARFHNQRKRLLLVQA*GLSGCQ Trigger: TTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS GCA 90 bp | CCTAGTCTCAAAGAGCTTTCTGGTTCCCTGTACATCTCCAGTGGCTaGAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTCCTGGCCTCT | + |
Preference number: 5 (lower is better) Translates to: PSLKELSGSLYISSG*RFPHGCLCCLLLAS Trigger: AGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAACCAGAAAGCTCTTTGAGACTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | AAGTCCTTCTCGTCCACCTCGATCTCACGAATGGCATCCAAAGGCTaGGTCTCAAAGATCCAACGAGTTGCACTGACATCCGGCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: KSFSSTSISRMASKG*VSKIQRVALTSGRA Trigger: AGCCCTGCCGGATGTCAGTGCAACTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | CTCAGCCTTGCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTaGCAACTCGCTCATAGGGTAGGTCTCAAACAGCCAACGGATAGT | + |
Preference number: 5 (lower is better) Translates to: LSLAHGVCDLRFSLL*QLAHRVGLKQPTDS Trigger: ACTATCCGTTGGCTGTTTGAGACCTACCCTATGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GTCCAGGGAACAGGTTTCAAACAGATGTCGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATCCGGAGATGGCTGGAAGTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: VQGTGFKQMSLMLNI*ARRDEIRRWLEVLL Trigger: GAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAACCTGTTCCCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGGCAGAATCAGTGTTTaGTCCTCTGTTTATGTTCCC | + |
Preference number: 5 (lower is better) Translates to: GPAHPRCEMLPSPGFALGGRISV*SSVYVP Trigger: GGGAACATAAACAGAGGACAAAACACTGATTCTGCC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTCTGTGCAGGTCTCCTTaGTCTATGCAGCTGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: LCVISHLVLRMALGLFLGLCRSP*SMQLAS Trigger: GCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAG...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGATTCCTGCAATGGAGCTaGGGCTACAGGTTTCCCATT | + |
Preference number: 5 (lower is better) Translates to: SSLARVCSFSWATSVLTRFLQWS*GYRFPI Trigger: AATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAA...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS TCA 90 bp | TTTCAAACAGATGTCGCTGATGCTGAACATCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGAAGTCCTTCTCGTCCACCTCGATCT | + |
Preference number: 5 (lower is better) Translates to: FQTDVADAEHLGQEG*DPEMAGSPSRPPRS Trigger: AGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAG | + |
Preference number: 5 (lower is better) Translates to: EAGTRVFLEPLVQSQTESSHWIG*RLAEIQ Trigger: CTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGA...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCTACAGGTTTCCCATTaGGAAGGACCACTTTTCCAG | + |
Preference number: 5 (lower is better) Translates to: CGVTALAWEKCAGRAGVWLQVSH*EGPLFQ Trigger: CTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS TCA 90 bp | CACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTTaGGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCTG | + |
Preference number: 5 (lower is better) Translates to: HPAAVPYRLSPTGLV*GWQRFSLKDMSVCL Trigger: CAGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTCTTGGGAGCACATACTaGGCAAGACAGAGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: GGFFLGSMVDSALEGFVSLGSTY*ARQSSP Trigger: AGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAAG...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS GCA 90 bp | CCTTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACAGGTTTCCCATTTGGAAGGACCACT | + |
Preference number: 5 (lower is better) Translates to: PFCPAWLISVFFLAS*NGAWATGFPFGRTT Trigger: AGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | TGCCTTCCCTTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCCATTTGGAAG | + |
Preference number: 5 (lower is better) Translates to: CLPFLPSMADIRFLP*FLQWSLGYRFPIWK Trigger: CTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 90 bp | GAAGCAATGGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTaGCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAAT | + |
Preference number: 5 (lower is better) Translates to: EAMVPSGLPEAAFPF*PAWLISVFFLASCN Trigger: ATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | ATCTCCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCT | + |
Preference number: 5 (lower is better) Translates to: ISTRLQYLTGFLPLD*FEAGRDSVSKTCLS Trigger: AGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | AAGGAATCTCCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTaGATTGGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTC | + |
Preference number: 5 (lower is better) Translates to: KESPPGCSTLQAFSH*IGLRLAEIQSQRHV Trigger: GACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGGAGATTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | GCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTTaGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCCAGCTGCC | + |
Preference number: 5 (lower is better) Translates to: AWLISVFFLASCNGA*ATGFPFGRTTFPAA Trigger: GGCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 90 bp | CTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATaGAGCTTGGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCC | + |
Preference number: 5 (lower is better) Translates to: LPSMADIRFLPCFLQ*SLGYRFPIWKDHFS Trigger: GGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS-3UTR CAA 90 bp | GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATGTTCTTCCTGGAGGTaGTCCCCTCTGATGCTCTCA | + |
Preference number: 5 (lower is better) Translates to: DEEAGTRVFLEPLVQSQTCSSWR*SPLMLS Trigger: TGAGAGCATCAGAGGGGACAACCTCCAGGAAGAACA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGGCAGGAGTGGATGCTaGCAGAACATCTTGGACAGG | + |
Preference number: 5 (lower is better) Translates to: GLEASGSFFVADWTEMKVGRSGC*QNILDR Trigger: CCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTAAGCATCCAGGGGTTTaGTTTCAAATAGCCAGAGTG | + |
Preference number: 5 (lower is better) Translates to: LCVISHLVLRMALGLFLGKHPGV*FQIARV Trigger: CACTCTGGCTATTTGAAACAAAACCCCTGGATGCTT...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGTTGCAGGTGACCCACTaGGACCTGGTCTCTGAAAGC | + |
Preference number: 5 (lower is better) Translates to: LCPDLGVYFSLRYNGFPELQVTH*DLVSES Trigger: GCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAA...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS-3UTR CAA 90 bp | GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTATCCGTTTTCTTCCTaGCTTCCTGCAATGGAGCTT | + |
Preference number: 5 (lower is better) Translates to: GWKLLQGVHVISASARSLYPFSS*LPAMEL Trigger: AAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATA...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111635.4 |
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CDS CCA 72 bp | CCCTCCTCAAGGGAGATCCCCCGAATCACCCGCACCTaGCTGGGGTCCTGGTTGAAGGCATCCAGAGGTCGG | + |
Preference number: 6 (lower is better) Translates to: PSSREIPRITRT*LGSWLKASRGR Trigger: CCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTGAGGAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | AGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTTaGCGGACGATCCTGGGAAGCTCACCACACACCAGC | + |
Preference number: 6 (lower is better) Translates to: SPCWSTSVRRST*RTILGSSPHTS Trigger: GCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGACCCTCTGGGGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: LAAAAGTWRRFL*GVVAADPLGLR Trigger: CCTCAGCCCCAGAGGGTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | CAGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAGCTCACCACACACCAG | + |
Preference number: 6 (lower is better) Translates to: QSLLVHVCPAQH*TDDPGKLTTHQ Trigger: CTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | CAGGGGCTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTaGAGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGT | + |
Preference number: 6 (lower is better) Translates to: QGLRGLLDGVLLVVA*SWVVRIFCHSSWES Trigger: ACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS CAA 90 bp | TCAAGGGAGATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGAC | + |
Preference number: 6 (lower is better) Translates to: SREIPRITRTWLGSW*KASRGRVSKSQRAD Trigger: GTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | CTGAACCAGCAGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAGCTCACCACACACCAGCTCCTCCTT | + |
Preference number: 6 (lower is better) Translates to: LNQQSLLVHVCPAQH*TDDPGKLTTHQLLL Trigger: AAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACTGCTGGTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | GCCCTGTCCTGTCTCTTGCATCACCAGCCCCGTCTTTaGCACAGAGACTCCCAGGCCACAGGCCAGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: ALSCLLHHQPRL*HRDSQATGQQL Trigger: CAGCTGCTGGCCTGTGGCCTGGGAGTCTCTGTGTCAAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | AGGATGCCTCCATGGTGCAGGATGCCGGGGGTGGCATaGAAAGTCCGAAGGGTTCTCTCGGCTGCTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: RMPPWCRMPGVA*KVRRVLSAAVS Trigger: GGAGACAGCAGCCGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAG | + |
Preference number: 6 (lower is better) Translates to: WRWLQGQSPVDA*SEPAGAGFGPQ Trigger: CTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CAGCTCCTCCTTCCGTATGTAGGGGCGCCCCTGCCCTaGGCTTGGGAGCACATACTTGGCAAGACAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: QLLLPYVGAPLP*AWEHILGKTEL Trigger: GAGCTCTGTCTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGGCGCCCCTACATACGGAAGGAGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CCACGTCTGTCCGGCGCAGCACTTGACGGACGATCCTaGGAAGCTCACCACACACCAGCTCCTCCTTCCGTA | + |
Preference number: 6 (lower is better) Translates to: PRLSGAALDGRS*EAHHTPAPPSV Trigger: TACGGAAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | ATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: IPRITRTWLGSW*KASRGRVSKSQ Trigger: CTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | GGCCCTGTCCTGTCTCTTGCATCACCAGCCCCGTCTTaGACACAGAGACTCCCAGGCCACAGGCCAGCAGCT | + |
Preference number: 6 (lower is better) Translates to: GPVLSLASPAPS*TQRLPGHRPAA Trigger: AGCTGCTGGCCTGTGGCCTGGGAGTCTCTGTGTCAAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | AGCCAGGTGAATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCTCCAGGGCC | + |
Preference number: 6 (lower is better) Translates to: SQVNLCTEPVGMDPR*IVVSGTSFLPASRA Trigger: GGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAATTCACCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | CTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTaGTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGG | + |
Preference number: 6 (lower is better) Translates to: LSPAGTWLVCRC*SPEPSAGFRDW Trigger: CCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TGCCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTaGTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGAT | + |
Preference number: 6 (lower is better) Translates to: CLSPAGTWLVCR*CSPEPSAGFRD Trigger: ATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TTCTTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAAGGAATCTCCACCCGG | + |
Preference number: 6 (lower is better) Translates to: FLPASRAWKTSF*RDTCPEGISTR Trigger: CCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | ACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAA | + |
Preference number: 6 (lower is better) Translates to: TGSEPCGCLLRT*WCRLWASAVAK Trigger: TTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CAAAGATCCAGCGCATACACTGAACATCGCCCTCAGTaGGCTCCTCCGAACCGAGGACCTCCGCCAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: QRSSAYTEHRPQ*APPNRGPPPGP Trigger: AGGACCTGGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CAGGTTCCCTGGCAGCCGGCCTCTCGTGATCGCCAATaGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCA | + |
Preference number: 6 (lower is better) Translates to: QVPWQPASRDRQ*HLAASSQRSSA Trigger: TGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGCCAGGGAACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTCTCGGCTGCTGTCTCCTGCCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGG | + |
Preference number: 6 (lower is better) Translates to: LSAAVSCLSGVP*PAEPFGCSSWR Trigger: CCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CCGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCTaGTGTCCCATGGCCTGCAGAGCCTTTTGGCTGTTC | + |
Preference number: 6 (lower is better) Translates to: PKGSLGCCLLPL*CPMACRAFWLF Trigger: GAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | CTCCAGTGGCTGCAGGTTCCCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCT | + |
Preference number: 6 (lower is better) Translates to: LQWLQVPSWLSV*PPPGLSAHPVA Trigger: AGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | TGTCACAAGCCCCTCACCCTCCTGGTGACCCACCCGTaGCAGGTGACCCACTTGGACCTGGTCTCTGAAAGC | + |
Preference number: 6 (lower is better) Translates to: CHKPLTLLVTHP*QVTHLDLVSES Trigger: GCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGGGTCACCAGGAGGGTGAGGGGCTTGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | TGGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGGTaGTCCCCTCTGATGCTCTCAGCTGCCAGGGAGCCC | + |
Preference number: 6 (lower is better) Translates to: WPAEPFGCSSWR*SPLMLSAAREP Trigger: GGGCTCCCTGGCAGCTGAGAGCATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | GATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTaGCCAAACGCAGATTCTGCATGGCTTCCTGGAGATCTGGAGCCC | + |
Preference number: 6 (lower is better) Translates to: DACSEPAGAGFGPQR*PNADSAWLPGDLEP Trigger: GGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | GTCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTaGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTG | + |
Preference number: 6 (lower is better) Translates to: VRALWMPAQNLLVQA*GLSGCQTQILHGFL Trigger: CAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | CACCGAGTGGTGCCGACATCCCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACCACATCGATGGTACTG | + |
Preference number: 6 (lower is better) Translates to: HRVVPTSPATTS*RVIPRTTSMVL Trigger: CAGTACCATCGATGTGGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGGGGATGTCGGCACCACTCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | AGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTaGATGGCTTCCTGGAGATCTGGAGCCCCAGACCCT | + |
Preference number: 6 (lower is better) Translates to: RLWASAVAKRRF*MASWRSGAPDP Trigger: AGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GGACTCCTCAGTAGCAGGTCCAGAACTTGGGTCTGTTaGCGGCTCCCACCGCAAACTGTGAAGGCTGTGCAG | + |
Preference number: 6 (lower is better) Translates to: GLLSSRSRTWVC*RLPPQTVKAVQ Trigger: CTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GACCCTCTGGGACTCCTCAGTAGCAGGTCCAGAACTTaGGTCTGTTGGCGGCTCCCACCGCAAACTGTGAAG | + |
Preference number: 6 (lower is better) Translates to: DPLGLLSSRSRT*VCWRLPPQTVK Trigger: CTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCCCAGAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GAGGTGTCTGCTGCCCGGAGGCACTCAAGCGAGATTTaGGGCATCACTTTCCCCAGAGGTTCCCAAGCCCTT | + |
Preference number: 6 (lower is better) Translates to: EVSAARRHSSEI*GITFPRGSQAL Trigger: AAGGGCTTGGGAACCTCTGGGGAAAGTGATGCCCCAAATCTCGCTTGAGTGCCTCCGGGCAGCAGACACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTTaGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAG | + |
Preference number: 6 (lower is better) Translates to: LLDGVLLVVALS*VVRIFCHSSWE Trigger: CTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS CAA 72 bp | GTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATaGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTC | + |
Preference number: 6 (lower is better) Translates to: VLLPRAFCWVQR*GPKHPGAGLCL Trigger: GAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | CCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTaGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGA | + |
Preference number: 6 (lower is better) Translates to: PAGWSPPGGGLE*GGQDLLSQQLG Trigger: TCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS CAA 90 bp | GGTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATaGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTTGCT | + |
Preference number: 6 (lower is better) Translates to: GLQVLLPRAFCWVQR*GPKHPGAGLCLSLA Trigger: AGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | CCTGTACATCTCCAGTGGCTGCAGGTTCCCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAA | + |
Preference number: 6 (lower is better) Translates to: PVHLQWLQVPSWLSV*PPPGLSAHPVAWSQ Trigger: TTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | AGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTGCATTGCTTaGAATCTCCTCCCGACAGGCAGCCTTGACTTCGTGGATGGTGCC | + |
Preference number: 6 (lower is better) Translates to: RSGLKEPASRPHCIA*NLLPTGSLDFVDGA Trigger: GGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | GCCTTGAGTAACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTaGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATG | + |
Preference number: 6 (lower is better) Translates to: ALSNPSGRSGCLQNI*DRHGGGYRVRALWM Trigger: CATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | TCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGCTCCTCCGAACCGAGG | + |
Preference number: 6 (lower is better) Translates to: SSRQFSKIQRIH*TSPSVGSSEPR Trigger: CCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | ACATCACCCCCTGATGGCCGGAGTCCCTCCGGCTCCTaGTCTGAGCTGTTGGTAAAGGAGCCTTCCTCAAAC | + |
Preference number: 6 (lower is better) Translates to: TSPPDGRSPSGS*SELLVKEPSSN Trigger: GTTTGAGGAAGGCTCCTTTACCAACAGCTCAGATCAGGAGCCGGAGGGACTCCGGCCATCAGGGGGTGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | CTGCATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTaGCTTCGTGGATGGTGCCCTCGGCATCCTGGATGG | + |
Preference number: 6 (lower is better) Translates to: LHCFESPPDRQP*LRGWCPRHPGW Trigger: CCATCCAGGATGCCGAGGGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | ATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTTaGTTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCT | + |
Preference number: 6 (lower is better) Translates to: IYAQSLWGWTPG*LWSPGPPSCPP Trigger: AGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GGCATCCAAAGGCTGCGTCTCAAAGATCCAACGAGTTaGACTGACATCCGGCAGGGCTCCCTCCTCAAGGGA | + |
Preference number: 6 (lower is better) Translates to: GIQRLRLKDPTS*TDIRQGSLLKG Trigger: TCCCTTGAGGAGGGAGCCCTGCCGGATGTCAGTGCAACTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TGCAGGTCTCCTTTGTCTATGCAGCTGGCCAGCAGCTaGACACTGCTTCTTTCAGGGGCCCTGCTGGTAAGC | + |
Preference number: 6 (lower is better) Translates to: CRSPLSMQLASS*TLLLSGALLVS Trigger: GCTTACCAGCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | CAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTaGCAAACGCAGATTCTGCATGGCTTCCTGGAGATC | + |
Preference number: 6 (lower is better) Translates to: QNLLVQALGLSG*QTQILHGFLEI Trigger: GATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TCAGCGCATCCAGTGGCTTGGTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCCCTGATGGCCGGAGTC | + |
Preference number: 6 (lower is better) Translates to: SAHPVAWSQTSV*QLGHHPLMAGV Trigger: GACTCCGGCCATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GCAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTCCTaGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAAAC | + |
Preference number: 6 (lower is better) Translates to: AGSLMVVCVASS*PLSASSGLVSN Trigger: GTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TTCCCTGTACATCTCCAGTGGCTGCAGGTTCCCTCATaGTTGTCTGTGTTGCCTCCTCCTGGCCTCTCAGCG | + |
Preference number: 6 (lower is better) Translates to: FPVHLQWLQVPS*LSVLPPPGLSA Trigger: CGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTGAACATCTGGGCCAGGAGGGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTCCACCTCGATCTCACG | + |
Preference number: 6 (lower is better) Translates to: LNIWARRDEIRR*LEVLLVHLDLT Trigger: CGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCA | + |
Preference number: 6 (lower is better) Translates to: CCSPEPSAGFRD*GPNIQVQDCVS Trigger: TGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTGCCTCTCTGGTGTCCCATGGCCTGCAGAGCCTTTTaGCTGTTCTTCCTGGAGGTTGTCCCCTCTGATGCT | + |
Preference number: 6 (lower is better) Translates to: LPLWCPMACRAF*LFFLEVVPSDA Trigger: AGCATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATaGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTT | + |
Preference number: 6 (lower is better) Translates to: GDLEPQTLEGKQ*FLLVFLRLPSL Trigger: AAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTaGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCA | + |
Preference number: 6 (lower is better) Translates to: SAVAKRRFCMAS*RSGAPDPRGEA Trigger: TGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAG | + |
Preference number: 6 (lower is better) Translates to: FGPQRLPNADSA*LPGDLEPQTLE Trigger: CTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATG | + |
Preference number: 6 (lower is better) Translates to: CGCLLRTCWCRL*ASAVAKRRFCM Trigger: CATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CAGGAGTGGATGCTTGCAGAACATCTTGGACAGGCATaGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCC | + |
Preference number: 6 (lower is better) Translates to: QEWMLAEHLGQA*RWLQGQSPVDA Trigger: GGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | AATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCC | + |
Preference number: 6 (lower is better) Translates to: NLCTEPVGMDPR*IVVSGTSFLPA Trigger: GGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | AACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTaGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCC | + |
Preference number: 6 (lower is better) Translates to: NPSGRSGCLQNI*DRHGGGYRVRA Trigger: GGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | AGAGATTGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTaGCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTGCCAAC | + |
Preference number: 6 (lower is better) Translates to: RDWGPNIQVQDCVSA*LTGSVTSDSRFSAN Trigger: GTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | CCCTCGGCATCCTGGATGGCGCATAGAGGTTCCGTCTaGAACAGCTTCACCGTCTTCTTCACATCGCCCTTC | + |
Preference number: 6 (lower is better) Translates to: PSASWMAHRGSV*NSFTVFFTSPF Trigger: GAAGGGCGATGTGAAGAAGACGGTGAAGCTGTTTCAGACGGAACCTCTATGCGCCATCCAGGATGCCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | GATGTCGCTGATGCTGAACATCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGAAGTCCTTCTCGTCCA | + |
Preference number: 6 (lower is better) Translates to: DVADAEHLGQEG*DPEMAGSPSRP Trigger: TGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | TGCAGGACTGTGTCTCAGCCTTGCTCACGGGGTCTGTaGCCTCAGATTCTCGCTTCTCTGCCAACTCGCTCA | + |
Preference number: 6 (lower is better) Translates to: CRTVSQPCSRGL*PQILASLPTRS Trigger: TGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | AGGCTGGCACCTGCTGGTTTAGATGTCAGGGTGTGGTaGGTTAGAGGGGCAGTCTTCAGGGAGGTGTCTGCT | + |
Preference number: 6 (lower is better) Translates to: RLAPAGLDVRVW*VRGAVFREVSA Trigger: AGCAGACACCTCCCTGAAGACTGCCCCTCTAACTCACCACACCCTGACATCTAAACCAGCAGGTGCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS GCA 72 bp | AGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTCCCGACAGGCAGCCTT | + |
Preference number: 6 (lower is better) Translates to: RSGLKEPASRPH*IALNLLPTGSL Trigger: AAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GGAGGTGGGCAGGGTGTGGATCCTGAGATTCTCAGCTaGCCCATCTCCATGGTGGAGTCTAATGGGGTAACA | + |
Preference number: 6 (lower is better) Translates to: GGGQGVDPEILS*PISMVESNGVT Trigger: TGTTACCCCATTAGACTCCACCATGGAGATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGCCCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GATGCTGCCTTGAGTAACCCCAGTGGCAGGAGTGGATaGTTGCAGAACATCTTGGACAGGCATGGAGGTGGC | + |
Preference number: 6 (lower is better) Translates to: DAALSNPSGRSG*LQNILDRHGGG Trigger: GCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GACTGCTTTGTTGTCCCCACTGACCTTTCTGGGGAATaGTGGGATCCTGGCTTCACTTCCAGCCACAGGCCT | + |
Preference number: 6 (lower is better) Translates to: DCFVVPTDLSGE*WDPGFTSSHRP Trigger: AGGCCTGTGGCTGGAAGTGAAGCCAGGATCCCAGCATTCCCCAGAAAGGTCAGTGGGGACAACAAAGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238557.3 |
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CDS CCA 72 bp | ACATCTGGGCCAGGAGGGATGAGATCCGGAGATGGCTaGAAGTCCTTCTCGTCCACCTCGATCTCACGAATG | + |
Preference number: 6 (lower is better) Translates to: TSGPGGMRSGDG*KSFSSTSISRM Trigger: CATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TGGATGCTTGCAGAACATCTTGGACAGGCATGGAGGTaGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCA | + |
Preference number: 6 (lower is better) Translates to: WMLAEHLGQAWR*LQGQSPVDACS Trigger: TGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | GGGATGAGGGAGGGACAGGTCCTCTTCTGTCCTCATTaGGATGGTTGGTGTAGGAGCTACCTGCATCTGGGC | + |
Preference number: 6 (lower is better) Translates to: GMREGQVLFCPH*DGWCRSYLHLG Trigger: GCCCAGATGCAGGTAGCTCCTACACCAACCATCCAAATGAGGACAGAAGAGGACCTGTCCCTCCCTCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | GTTGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTaGGTCTCAAACATCTGTCTGGCAGCTTGGACATCA | + |
Preference number: 6 (lower is better) Translates to: VASSWPLSASSG*VSNICLAAWTS Trigger: TGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | TCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTaGCCAAACGCAGATTCTGCATGGCTTCCTGGAGAT | + |
Preference number: 6 (lower is better) Translates to: SEPAGAGFGPQR*PNADSAWLPGD Trigger: ATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | CCTGGACCCTTCCCCTCTTCCTCCTCTGGTTTCTGTTaGTCTTGTTGGTGGATCATCTCCAATGGCTGCGTC | + |
Preference number: 6 (lower is better) Translates to: PGPFPSSSSGFC*SCWWIISNGCV Trigger: GACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAAGAGGGGAAGGGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTaGCAACTCGCTCATAGGGTAGGTCTCAAACAGCCA | + |
Preference number: 6 (lower is better) Translates to: AHGVCDLRFSLL*QLAHRVGLKQP Trigger: TGGCTGTTTGAGACCTACCCTATGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CTGTCCTGCATAGCATATACCGGGGCGTCAGAACCCTaGGACTGCTCGGCAGAATCAGTGTTTTGTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: LSCIAYTGASEP*DCSAESVFCPL Trigger: CAGAGGACAAAACACTGATTCTGCCGAGCAGTCCCAGGGTTCTGACGCCCCGGTATATGCTATGCAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111635.4 ENSMUST00000213113.2 ENSMUST00000238557.3 |
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CDS CAA 90 bp | AATAGCCAGAGTGTAGAGCGGACATCGCCAGGAATCACCTCCTCCTaGGGTGGCACCTCTGCCTCTGTTTCTCTTTCACCCTTCAGAGTG | + |
Preference number: 6 (lower is better) Translates to: NSQSVERTSPGITSS*GGTSASVSLSPFRV Trigger: CACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCTACACTCTGGCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | AGCTTCACCGTCTTCTTCACATCGCCCTTCAGCTCCTaGATCTCTGAGCGCAGCTCTAAAGGACTCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: SFTVFFTSPFSS*ISERSSKGLCS Trigger: GGAGCAGAGTCCTTTAGAGCTGCGCTCAGAGATTCAGGAGCTGAAGGGCGATGTGAAGAAGACGGTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TTCTGTTGCTCTTGTTGGTGGATCATCTCCAATGGCTaGGTCTCAAAGAGCCACCGAGTGGTGCCGACATCC | + |
Preference number: 6 (lower is better) Translates to: FCCSCWWIISNG*VSKSHRVVPTS Trigger: GGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GCAAACTGTGAAGGCTGTGCAGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCACACTGCTTCTTTCAG | + |
Preference number: 6 (lower is better) Translates to: ANCEGCAGLLCL*SWPAAAHCFFQ Trigger: CTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | GCTGGAAGTCCTTCTCGTCCACCTCGATCTCACGAATaGCATCCAAAGGCTGCGTCTCAAAGATCCAACGAG | + |
Preference number: 6 (lower is better) Translates to: AGSPSRPPRSHE*HPKAASQRSNE Trigger: CTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | TGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCACCGAGTGGTGCCGAC | + |
Preference number: 6 (lower is better) Translates to: WFLLLLLVDHLQ*LRLKEPPSGAD Trigger: GTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | GTGGATGTGTTTGTAGAGACGCCGGAGCTCACTGGCTaGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTT | + |
Preference number: 6 (lower is better) Translates to: VDVFVETPELTG*PLLLELGEGFF Trigger: AAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTCTCTACAAACACATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | CTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCCATTaGGAAGGACCACTTTTCCAGCTGCCCGAGATGGAG | + |
Preference number: 6 (lower is better) Translates to: LPAMELGLQVSH*EGPLFQLPEME Trigger: CTCCATCTCGGGCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | CCACCCGTTGCAGGTGACCCACTTGGACCTGGTCTCTaGAAGCATCCAGGGGTTTTGTTTCAAATAGCCAGA | + |
Preference number: 6 (lower is better) Translates to: PPVAGDPLGPGL*KHPGVLFQIAR Trigger: TCTGGCTATTTGAAACAAAACCCCTGGATGCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS TCA 72 bp | TTCCTGAGGCTGCCTTCCCTTTCTGCCCAGCATGGCTaGTATCCGTTTTCTTCCTTGCTTCCTGCAATGGAG | + |
Preference number: 6 (lower is better) Translates to: FLRLPSLSAQHG*YPFSSLLPAME Trigger: CTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | AAAGAGCTTTCTGGTTCCCTGTACATCTCCAGTGGCTaGAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTC | + |
Preference number: 6 (lower is better) Translates to: KELSGSLYISSG*RFPHGCLCCLL Trigger: GAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAACCAGAAAGCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | GTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTaGCCAGCATGGCTGATATCCGTTTTCTTCCTTGCT | + |
Preference number: 6 (lower is better) Translates to: VPSGLPEAAFPF*PAWLISVFFLA Trigger: AGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | ACAGGTTTCAAACAGATGTCGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATCCGGAGATGGCTGGAA | + |
Preference number: 6 (lower is better) Translates to: TGFKQMSLMLNI*ARRDEIRRWLE Trigger: TTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | CCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCT | + |
Preference number: 6 (lower is better) Translates to: PPGCSTLQAFSHWIG*RLAEIQSQRHVCLS Trigger: AGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TGCATAGCATATACCGGGGCGTCAGAACCCTGGGACTaGTCGGCAGAATCAGTGTTTTGTCCTCTGTTTATG | + |
Preference number: 6 (lower is better) Translates to: CIAYTGASEPWD*SAESVFCPLFM Trigger: CATAAACAGAGGACAAAACACTGATTCTGCCGAGCAGTCCCAGGGTTCTGACGCCCCGGTATATGCTATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111635.4 ENSMUST00000213113.2 ENSMUST00000238557.3 |
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CDS GCA 72 bp | TTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCC | + |
Preference number: 6 (lower is better) Translates to: FLPSMADIRFLP*FLQWSLGYRFP Trigger: GGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | CGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACA | + |
Preference number: 6 (lower is better) Translates to: RLQYLTGFLPLD*FEAGRDSVSKT Trigger: TGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 90 bp | AGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTaGGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCCAGCTGC | + |
Preference number: 6 (lower is better) Translates to: SMADIRFLPCFLQWS*GYRFPIWKDHFSSC Trigger: GCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS GCA 72 bp | CCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACAGGTTTCCCATTTGGA | + |
Preference number: 6 (lower is better) Translates to: PAWLISVFFLAS*NGAWATGFPFG Trigger: TCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CAA 72 bp | TGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTC | + |
Preference number: 6 (lower is better) Translates to: CSTLQAFSHWIG*RLAEIQSQRHV Trigger: GACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |
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CDS CCA 72 bp | ATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTTaGGCTACAGGTTTCCCATTTGGAAGGACCACTTTT | + |
Preference number: 6 (lower is better) Translates to: ISVFFLASCNGA*ATGFPFGRTTF Trigger: AAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111635.4 ENSMUST00000238557.3 |