RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XIRP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079243

Ensembl transcript IDs: ENSMUST00000111635.4, ENSMUST00000213113.2, ENSMUST00000238557.3

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTCGAAGAGCTTCCGCAGGGCCTGCACATCCACGCTGCGAGATaGTTCCTTCTCCAGGGTTTGCACTTGGCTCAGGAGGCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: ALEELPQGLHIHAAR*FLLQGLHLAQEALE
Trigger: CTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp CCCATGACTCAGTCCTGGGGGAGCTCTGGGAGAGGTACCCAAGACTaGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTTGT +
Preference number: 1 (lower is better)
Translates to: PMTQSWGSSGRGTQD*WETEGLTGQPGGSC
Trigger: ACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAGCTCCCCCAGGACTGAGTCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp CATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTaGGTCTGCGTGCTGGGTGATGGTGGTGGAGGAAGTGAGGACTGT +
Preference number: 1 (lower is better)
Translates to: HGRSVQAELGSGVRQ*VCVLGDGGGGSEDC
Trigger: ACAGTCCTCACTTCCTCCACCACCATCACCCAGCACGCAGACCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 90 bp GCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGTGGAGTAACTaGCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGG +
Preference number: 1 (lower is better)
Translates to: ASARSLLSLEGLWSN*LSMGEVCRQSWGLG
Trigger: CCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TCTCCAGCCTCCTGGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGG +
Preference number: 1 (lower is better)
Translates to: SPASWRAGRSLLPGL*PLRDFSSCPQDGSR
Trigger: CCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TACCTGGCTCACCTGGCTTATGGTCTTGTCCTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCTTGGGCAGCCTCTGAGGTGGGTGGA +
Preference number: 1 (lower is better)
Translates to: YLAHLAYGLVLLLRL*QSLLRAWAASEVGG
Trigger: TCCACCCACCTCAGAGGCTGCCCAAGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TGCAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTGGGTCTGCGTGCTaGGTGATGGTGGTGGAGGAAGTGAGGACTGTATTCCCAAATTGG +
Preference number: 1 (lower is better)
Translates to: CRQSWGLGSVSGSAC*VMVVEEVRTVFPNW
Trigger: CCAATTTGGGAATACAGTCCTCACTTCCTCCACCACCATCACCCAGCACGCAGACCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp CCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTGGCCTGCTATTGTaGGAGCTTTGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTG +
Preference number: 1 (lower is better)
Translates to: PWSFQPEAGSPGLLL*ELCLTLGWLYLAHL
Trigger: CAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp GCTTTGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTGGCTTATaGTCTTGTCCTGCTTCTGAGGCTCTGGCAGAGCCTGCTAAGGGC +
Preference number: 1 (lower is better)
Translates to: ALSDPGLAIPGSPGL*SCPASEALAEPAKG
Trigger: GCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp GGTTGCTTCTGGCCCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTaGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTTGGCTATA +
Preference number: 1 (lower is better)
Translates to: GCFWPLELSARGRQS*PAIVGALSDPGLAI
Trigger: TATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTaGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: YPRLVGDRGAHWAAG*KLLQGVHVISASAR
Trigger: CCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp CTCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTaGGCAGCCGGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCA +
Preference number: 1 (lower is better)
Translates to: LWERYPRLVGDRGAH*AAGWKLLQGVHVIS
Trigger: TGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp GATGTGCAGGTTTGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATaGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGACCCTTCAGGGG +
Preference number: 1 (lower is better)
Translates to: DVQVWEALGVSFLEA*WIPLWRVLSLTLQG
Trigger: CCCCTGAAGGGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAACCTGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp CACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTaGCTATGGAGGGACACAGTGCAGGGTGACCCTCCAGCTCTAGGC +
Preference number: 1 (lower is better)
Translates to: HQGLRQPDSITKEKG*LWRDTVQGDPPALG
Trigger: GCCTAGAGCTGGAGGGTCACCCTGCACTGTGTCCCTCCATAGCCAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 90 bp TGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTaGGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGCATGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: CYRESMLSQLLPGHC*AWRGCGVTALAWEK
Trigger: CTTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTAAGAGCCTTGTGCACTGCTTCTTCG +
Preference number: 1 (lower is better)
Translates to: SFVVPCGWLLVGASD*RLDMELRALCTASS
Trigger: CGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 90 bp CTGCTCGGTCACTGTTCTCATGGCTCCATAGGACTTGGAGGTAGTTaGCCCAGTCTGGAATTCCAGAACATTCTTTGGCTGCCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: LLGHCSHGSIGLGGS*PSLEFQNILWLPCE
Trigger: CTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAACTACCTCCAAGTCCTATGGAGCCATGAGAACAGTGACCGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp ACTGAGACCTTGTTCACACTGGGATCTTTTGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCAGACTGGAGGCTAGACATGGAGCTA +
Preference number: 1 (lower is better)
Translates to: TETLFTLGSFVVPCG*LLVGASDWRLDMEL
Trigger: TAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAAGGTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 90 bp TGCTGGGTGATGGTGGTGGAGGAAGTGAGGACTGTATTCCCAAATTaGTCCATCTCCTCATACTGCTCGGTCACTGTTCTCATGGCTCCA +
Preference number: 1 (lower is better)
Translates to: CWVMVVEEVRTVFPN*SISSYCSVTVLMAP
Trigger: TGGAGCCATGAGAACAGTGACCGAGCAGTATGAGGAGATGGACCAATTTGGGAATACAGTCCTCACTTCCTCCACCACCATCACCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGGCAGGACGTTCACTaGTGCCTGGCCTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPGQDVH*CLASGL
Trigger: GAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCGGGGCCTGCTGGATaGAGTCCTCCTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PPALGNEVQAHMCECELGPGPAG*SPPGGG
Trigger: GCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGAGCATGGGAGAAGTGTaGAGGCAGAGCTGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPSMGEV*RQSWGL
Trigger: CAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGAGACTCGGGGCTCTaGCTGTTGCTGCTGGTTATC +
Preference number: 2 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPGDSGL*LLLLVI
Trigger: GATAACCAGCAGCAACAGCCAGAGCCCCGAGTCTCC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp CTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTaGGCTCAGGAGGCCCTGGAGCTCCTGATGGCTGCCCTGTGGACT +
Preference number: 2 (lower is better)
Translates to: LHIHAARCFLLQGLH*AQEALELLMAALWT
Trigger: AGTCCACAGGGCAGCCATCAGGAGCTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTA +
Preference number: 2 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPVGASD*RLDMEL
Trigger: TAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCAC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp GCTAGGCCTGGAAGCCATAGAGCTGAGTGGACGCTGATGAGCAGGTaGCTTCTGGCCCTTGGAGCTTTCAGCCAGAGGCAGGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: ARPGSHRAEWTLMSR*LLALGAFSQRQAVL
Trigger: CAGGACTGCCTGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCTTCCAGGCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTCTTTGGCTGCCCTGTaGGCACAGCGCCCTCGATGC +
Preference number: 2 (lower is better)
Translates to: QGVHVISASARSLLSLEGSLAAL*AQRPRC
Trigger: GCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGAGCTAAGAGCCTTGTaGACTGCTTCTTCGATGTCC +
Preference number: 2 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPELRAL*TASSMS
Trigger: GGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTC...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp CTTTCAGCCAGAGGCAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTaGTCTGACCCTGGGTTGGCTATACCTGGCTCACCTGGCTTATGG +
Preference number: 2 (lower is better)
Translates to: LSARGRQSWPAIVGA*SDPGLAIPGSPGLW
Trigger: CCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCTGGCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp AGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTaGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTG +
Preference number: 2 (lower is better)
Translates to: RLVGDRGAHWAAGWK*LQGVHVISASARSL
Trigger: CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGCCATAGAGCTGAGTaGACGCTGATGAGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGSHRAE*TLMSRL
Trigger: CAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAGTGGGTCTGCGTGCTaGGTGATGGTGGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QGVHVISASARSLLSLEGSGSAC*VMVVEE
Trigger: TTCCTCCACCACCATCACCCAGCACGCAGACCCACT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp CTTGTGGGAGCCTCAGACTGGAGGCTAGACATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATGTCCAGCAGCCTGGCTAGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LVGASDWRLDMELRA*CTASSMSSSLARVC
Trigger: ACAGACCCTAGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGATGTCTGACCCTGGGTTaGCTATACCTGGCTCACCTG +
Preference number: 2 (lower is better)
Translates to: SSLARVCSFSWATSVLTRCLTLG*LYLAHL
Trigger: CAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACA...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGTGTCTCCAGCCTCCTaGAGGGCAGGACGTTCACTG +
Preference number: 2 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESVSPAS*RAGRSL
Trigger: CAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGACAC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTCCTGGTGGTGGCCTTaGGTTGGGTGGTCAGGATCT +
Preference number: 2 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRSWWWP*VGWSGS
Trigger: AGATCCTGACCACCCAACTCAAGGCCACCACCAGGA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCAGGACGTTCACTGCTaGCTGGCCTCTGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLQDVHC*LASGLC
Trigger: GCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGGCTCCGGGGCCTGCTaGATGGAGTCCTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: GLEASGSFFVADWTEMKVGSGAC*MESSWW
Trigger: CCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCCAAAGGCCTGCTCCATaGAGGCCTCAGTCATGTGGG +
Preference number: 2 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESQRPAP*RPQSCG
Trigger: CCCACATGACTGAGGCCTCCATGGAGCAGGCCTTTG...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGTCTTGTCCTGCTTCTaGGGCTCTGGCAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTVLSCF*GSGRAC
Trigger: GCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGAC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGTTCCCCAAAGGCCTaGTCCATGGAGGCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: GWKLLQGVHVISASARSLSSPKA*SMEASV
Trigger: GACTGAGGCCTCCATGGAGCAGGCCTTTGGGGAACT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAAGAGCCTTGTGCACTaGTTCTTCGATGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGVHVISASARSLLSLEGKSLVH*FFDVQQ
Trigger: CTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGGGGGTTTCTTTCTTaGAAGCATGGTGGATTCCGC +
Preference number: 2 (lower is better)
Translates to: QGVHVISASARSLLSLEGWGFLS*KHGGFR
Trigger: GCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp GAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTaGCTCAGCCCCGGGTCCTCACCAGGGATTAAGGCAGCCAGATTC +
Preference number: 2 (lower is better)
Translates to: EPLVQSQTESSVMSS*LSPGSSPGIKAARF
Trigger: GAATCTGGCTGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAGGCCCTGGAGCTCCTaGTGGCTGCCCTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPERPWSS*WLPCGL
Trigger: GAGTCCACAGGGCAGCCATCAGGAGCTCCAGGGCCT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCT +
Preference number: 2 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTLLLRL*QSLLRA
Trigger: AGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTACTCCCCCTCCCAGCTaGGGTACGCCCTCGAAGAGC +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSTPPPS*GTPSKS
Trigger: GCTCTTCGAGGGCGTACCCCAGCTGGGAGGGGGAGT...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp TTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTGACCTGGCTGGAGCTTGTCTGTATG +
Preference number: 2 (lower is better)
Translates to: FLILSSGWLSAFSWV*TRGGSLTWLELVCM
Trigger: CATACAGACAAGCTCCAGCCAGGTCAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp TTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTaGAGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGCATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LLQGVHVISASARSL*SLEGLWSNCLSMGE
Trigger: TTCTCCCATGCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGGGAGCTCCTGATGGCTaGCCTGTGGACTCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPEGAPDG*PVDSQG
Trigger: CCCCTGAGAGTCCACAGGGCAGCCATCAGGAGCTCC...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGGCTCACCTGGCTTATaGTCTTGTCCTGCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: GWKLLQGVHVISASARSLGSPGL*SCPASE
Trigger: CTCAGAAGCAGGACAAGACCATAAGCCAGGTGAGCC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGTGTGCAGGCAGAGCTaGGGTCTGGGGTCCGTCAGT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSVCRQS*GLGSVS
Trigger: ACTGACGGACCCCAGACCCCAGCTCTGCCTGCACAC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 90 bp TGTCCCTCCCATCCGGCTTTCCTGTGGATGGCTGCTTTATGTTTCTaGCCTCTTTTCCAAGAACTAACAAGGCAAACAGCCCTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: CPSHPAFLWMAALCF*PLFQELTRQTALVS
Trigger: GCTCACGAGGGCTGTTTGCCTTGTTAGTTCTTGGAAAAGAGGCAAGAAACATAAAGCAGCCATCCACAGGAAAGCCGGATGGGAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGTCCGTCAGTGGGTCTaGGTGCTGGGTGATGGTGGT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSVRQWV*VLGDGG
Trigger: ACCACCATCACCCAGCACGCAGACCCACTGACGGAC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGGTTTGGGAGGCACTaGGGGTTTCTTTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: GWKLLQGVHVISASARSLRFGRH*GFLSWK
Trigger: CTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAACCT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTAGCCTGCTAAGGGCTTaGGCAGCCTCTGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSSLLRA*AASEVG
Trigger: ACCCACCTCAGAGGCTGCCCAAGCCCTTAGCAGGCT...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACGATGTCCAGCAGCCTaGCTAGGGTCTGTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTRCPAA*LGSVLS
Trigger: TGAAAGAACAGACCCTAGCCAGGCTGCTGGACATCG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: KLLQGVHVISASARSLLSVVPCG*LLVGAS
Trigger: TGAGGCTCCCACAAGCAGCCATCCACAGGGAACTAC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCA +
Preference number: 2 (lower is better)
Translates to: GLEASGSFFVADWTEMKVLLPGL*PLRDFS
Trigger: TGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACACGGTCACTGTTCTCATaGCTCCATAGGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTRSLFS*LHRTWR
Trigger: CCTCCAAGTCCTATGGAGCCATGAGAACAGTGACCG...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTCCTTCTCCAGGGTTTaGACTTGGCTCAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSSFSRV*TWLRRP
Trigger: GGGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGAGAGGAGGATCCTGTaGAGGGAGGAGAGACTTGTA +
Preference number: 2 (lower is better)
Translates to: KLLQGVHVISASARSLLSERRIL*REERLV
Trigger: TACAAGTCTCTCCTCCCTGCACAGGATCCTCCTCTC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATTAGATGTGCAGGTTTaGGAGGCACTGGGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTLDVQV*EALGVS
Trigger: AGAAACCCCCAGTGCCTCCCAAACCTGCACATCTAA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAGAGGCAGGCAGTCCTaGCCTGCTATTGTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPERGRQS*PAIVGA
Trigger: AGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGTTGCTTCTGGCCCTTaGAGCTTTCAGCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: GLEASGSFFVADWTEMKVVASGP*SFQPEA
Trigger: TGCCTCTGGCTGAAAGCTCCAAGGGCCAGAAGCAAC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGTGTGTATTTTTCCCTaGGATATAATGGCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGVCIFP*DIMASL
Trigger: CAGGGAAGCCATTATATCTCAGGGAAAAATACACAC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGTTCTTTGTAGCTGATTaGACTGAGATGAAAGTTGGA +
Preference number: 2 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGFFVAD*TEMKVG
Trigger: TCCAACTTTCATCTCAGTCCAATCAGCTACAAAGAA...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR TCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTGGTGGTGGAGGAAGTaGGGACTGTATTCCCAAATT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSWWWRK*GLYSQI
Trigger: AATTTGGGAATACAGTCCTCACTTCCTCCACCACCA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR GCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTGTTATCTCAGCTTCTaGCAGGTCACTGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSCYLSF*QVTVEP
Trigger: AGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTCTTGGAAGCATGGTaGATTCCGCTTTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSFLEAW*IPLWRV
Trigger: AACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GGCCAGGCTCGGCTCCTCTCAGTGTCTCCAGCCTCCTaGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: GQARLLSVSPAS*RAGRSLLPGLW
Trigger: CCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGAGGCTGGAGACACTGAGAGGAGCCGAGCCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp CAGTCCTGGGGGAGCTCTGGGAGAGGTACCCAAGACTaGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGT +
Preference number: 3 (lower is better)
Translates to: QSWGSSGRGTQD*WETEGLTGQPG
Trigger: ACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGAGCTCCCCCAGGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp AGCTGGGGTACGCCCTCGAAGAGCTTCCGCAGGGCCTaGACATCCACGCTGCGAGATGCTTCCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: SWGTPSKSFRRA*TSTLRDASFSR
Trigger: CCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGGGCGTACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp GGGCTGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTaGAGGCAGAGCTGGGGTCTGGGGTCCGTCAGTGGG +
Preference number: 3 (lower is better)
Translates to: GLWSNCLSMGEV*RQSWGLGSVSG
Trigger: CCCACTGACGGACCCCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp GAGCTTCCGCAGGGCCTGCACATCCACGCTGCGAGATaGTTCCTTCTCCAGGGTTTGCACTTGGCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: ELPQGLHIHAAR*FLLQGLHLAQE
Trigger: CTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp CCTCGAAGAGCTTCCGCAGGGCCTGCACATCCACGCTaGGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGC +
Preference number: 3 (lower is better)
Translates to: PRRASAGPAHPR*EMLPSPGFALG
Trigger: GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCCTGCGGAAGCTCTTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 72 bp GGAGACTCGGGGCTCTGGCTGTTGCTGCTGGTTATCTaGCCCCTGCTAGGCCTGGAAGCCATAGAGCTGAGT +
Preference number: 3 (lower is better)
Translates to: GDSGLWLLLLVI*PLLGLEAIELS
Trigger: ACTCAGCTCTATGGCTTCCAGGCCTAGCAGGGGTCAGATAACCAGCAGCAACAGCCAGAGCCCCGAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp CACCTGGCTTATGGTCTTGTCCTGCTTCTGAGGCTCTaGCAGAGCCTGCTAAGGGCTTGGGCAGCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: HLAYGLVLLLRL*QSLLRAWAASE
Trigger: CTCAGAGGCTGCCCAAGCCCTTAGCAGGCTCTGCCAGAGCCTCAGAAGCAGGACAAGACCATAAGCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp CTGACCCCTGCTAGGCCTGGAAGCCATAGAGCTGAGTaGACGCTGATGAGCAGGTTGCTTCTGGCCCTTGGA +
Preference number: 3 (lower is better)
Translates to: LTPARPGSHRAE*TLMSRLLLALG
Trigger: TCCAAGGGCCAGAAGCAACCTGCTCATCAGCGTCCACTCAGCTCTATGGCTTCCAGGCCTAGCAGGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp AGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTaGGCAGCCGGGTGGAAGTTGTTACAGGGAGTCCAT +
Preference number: 3 (lower is better)
Translates to: RYPRLVGDRGAH*AAGWKLLQGVH
Trigger: ATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCGCTTTGGAGGGTTTaGTCTCTGACCCTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: PPALGNEVQAHMCECELGPLWRV*SLTLQG
Trigger: CCCCTGAAGGGTCAGAGACAAAACCCTCCAAAGCGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCTGTGGATGGCTGCTaGTGGGAGCCTCAGACTGGA +
Preference number: 3 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWPVDGC*WEPQTG
Trigger: TCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 72 bp CAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTTGTCTaGCCCTGGGTTGGCTATACCTGGCTCACCTGGCTT +
Preference number: 3 (lower is better)
Translates to: QAVLACYCGSFV*PWVGYTWLTWL
Trigger: AAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp TCCTGGAGGGCAGGACGTTCACTGCTGCCTGGCCTCTaGCCTCTGCGTGATTTCTCATCTTGTCCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: SWRAGRSLLPGL*PLRDFSSCPQD
Trigger: ATCCTGAGGACAAGATGAGAAATCACGCAGAGGCCAGAGGCCAGGCAGCAGTGAACGTCCTGCCCTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp CTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGGGTaGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCT +
Preference number: 3 (lower is better)
Translates to: LVGDRGAHWAAG*KLLQGVHVISA
Trigger: AGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GAGCCTTGTGCACTGCTTCTTCGATGTCCAGCAGCCTaGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTG +
Preference number: 3 (lower is better)
Translates to: EPCALLLRCPAA*LGSVLSAGQPL
Trigger: CAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTaGAGGCTAGACATGGAGCTAAGAGCCTTGTGCACT +
Preference number: 3 (lower is better)
Translates to: VPCGWLLVGASD*RLDMELRALCT
Trigger: AGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGAGCTATTGTGCTTTaGTGGTGGGCTGGAGTCATT +
Preference number: 3 (lower is better)
Translates to: PPALGNEVQAHMCECELGGAIVL*WWAGVI
Trigger: AATGACTCCAGCCCACCACAAAAGCACAATAGCTCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp GTTGACCCAGTCTGGAATTCCAGAACATTCTTTGGCTaGCCTGTGAGCACAGCGCCCTCGATGCACATCTCC +
Preference number: 3 (lower is better)
Translates to: VDPVWNSRTFFG*PVSTAPSMHIS
Trigger: GGAGATGTGCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTTaGCTATACCTGGCTCACCTGGCTTATGGTCTTGTC +
Preference number: 3 (lower is better)
Translates to: GLLLWELCLTLG*LYLAHLAYGLV
Trigger: GACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 72 bp CAGTCTGGAATTCCAGAACATTCTTTGGCTGCCCTGTaGGCACAGCGCCCTCGATGCACATCTCCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: QSGIPEHSLAAL*AQRPRCTSPLS
Trigger: GGACAAAGGAGATGTGCATCGAGGGCGCTGTGCTCACAGGGCAGCCAAAGAATGTTCTGGAATTCCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp GAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTaGCAGGTCACTGTTGAGCCTGGAGGGGCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: EVVTGSPCYLSF*QVTVEPGGAVE
Trigger: CTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR GCA 72 bp TCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTaGTCAGCCCCGGGTCCTCACCAGGGATTAAGGCAG +
Preference number: 3 (lower is better)
Translates to: SNLKQRAVSCPV*SAPGPHQGLRQ
Trigger: CTGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GACCTTGTTCACACTGGGATCTTTTGTAGTTCCCTGTaGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: DLVHTGIFCSSL*MAACGSLRLEA
Trigger: AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGGTGGTGGCCTTGAGTaGGGTGGTCAGGATCTTCTG +
Preference number: 3 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTGGGLE*GGQDLL
Trigger: CAGAAGATCCTGACCACCCAACTCAAGGCCACCACC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCCTGGGGGTTTCTTTCTaGGAAGCATGGTGGATTCCG +
Preference number: 3 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESLGVSF*EAWWIP
Trigger: CGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAG...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATTCCTTCTCCAGGGTTaGCACTTGGCTCAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTFLLQG*HLAQEA
Trigger: GGCCTCCTGAGCCAAGTGCAAACCCTGGAGAAGGAA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp TGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATGGTaGATTCCGCTTTGGAGGGTTTTGTCTCTGACCCTT +
Preference number: 3 (lower is better)
Translates to: WEALGVSFLEAW*IPLWRVLSLTL
Trigger: AAGGGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp GTTTGGGAGGCACTGGGGGTTTCTTTCTTGGAAGCATaGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGACC +
Preference number: 3 (lower is better)
Translates to: VWEALGVSFLEA*WIPLWRVLSLT
Trigger: GGTCAGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCCAGTGCCTCCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp TTGTTCACACTGGGATCTTTTGTAGTTCCCTGTGGATaGCTGCTTGTGGGAGCCTCAGACTGGAGGCTAGAC +
Preference number: 3 (lower is better)
Translates to: LFTLGSFVVPCG*LLVGASDWRLD
Trigger: GTCTAGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGATCCCAGTGTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTTAGATGTGCAGGTTaGGGAGGCACTGGGGGTTTC +
Preference number: 3 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLLRCAG*GGTGGF
Trigger: GAAACCCCCAGTGCCTCCCAAACCTGCACATCTAAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTCCAGGGTTTGCACTaGGCTCAGGAGGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSLQGLH*AQEALE
Trigger: CTCCAGGGCCTCCTGAGCCAAGTGCAAACCCTGGAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTG +
Preference number: 3 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTAFSWV*TRGGSL
Trigger: CAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp TCAGGTCCTGTCCCTCCCATCCGGCTTTCCTGTGGATaGCTGCTTTATGTTTCTTGCCTCTTTTCCAAGAAC +
Preference number: 3 (lower is better)
Translates to: SGPVPPIRLSCG*LLYVSCLFSKN
Trigger: GTTCTTGGAAAAGAGGCAAGAAACATAAAGCAGCCATCCACAGGAAAGCCGGATGGGAGGGACAGGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CCA 72 bp TTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTaGCTATGGAGGGACACAGTGCAGGGTGACCCTCCA +
Preference number: 3 (lower is better)
Translates to: LRQPDSITKEKG*LWRDTVQGDPP
Trigger: TGGAGGGTCACCCTGCACTGTGTCCCTCCATAGCCAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 72 bp CTGGCTGGAGCTTGTCTGTATGGCTCTGCTACTGACTaGGACCTTGTTCACACTGGGATCTTTTGTAGTTCC +
Preference number: 3 (lower is better)
Translates to: LAGACLYGSATD*DLVHTGIFCSS
Trigger: GGAACTACAAAAGATCCCAGTGTGAACAAGGTCTCAGTCAGTAGCAGAGCCATACAGACAAGCTCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR TCA 72 bp CACTGTTCTCATGGCTCCATAGGACTTGGAGGTAGTTaGCCCAGTCTGGAATTCCAGAACATTCTTTGGCTG +
Preference number: 3 (lower is better)
Translates to: HCSHGSIGLGGS*PSLEFQNILWL
Trigger: CAGCCAAAGAATGTTCTGGAATTCCAGACTGGGTCAACTACCTCCAAGTCCTATGGAGCCATGAGAACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATG +
Preference number: 3 (lower is better)
Translates to: GLEASGSFFVADWTEMKVMELRA*CTASSM
Trigger: CATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCAT...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR-3UTR CAA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGGACTGTATTCCCAAATaGGTCCATCTCCTCATACTG +
Preference number: 3 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLDCIPK*VHLLIL
Trigger: CAGTATGAGGAGATGGACCAATTTGGGAATACAGTC...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGCAGGCCCTGGCAGCGTaGGTGGGTGGAGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPQALAA*VGGAGA
Trigger: AGCTCCAGCTCCACCCACTCACGCTGCCAGGGCCTG...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGGGTCACCAGGCCCTaGCAGCGTGAGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGRVTRP*QREWVE
Trigger: CTCCACCCACTCACGCTGCCAGGGCCTGGTGACCCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGCAGCCGGCCTCTCGTaGTCGCCAATGGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGAAGLS*SPMASS
Trigger: GCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGCTGGGGTCCTGGTTaGAGGCATCCAGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGGWGPG*RHPEVG
Trigger: CCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGACAGAAGTCAGGGCATaGAGCTGTCCCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPTEVRA*SCPLLS
Trigger: GGACAGCAGGGGACAGCTTCATGCCCTGACTTCTGT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACAGACCCTCTGGGGCTaGGGGATGAGGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRQTLWG*GMREGQ
Trigger: CTGTCCCTCCCTCATCCCTCAGCCCCAGAGGGTCTG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCGGAGCTCACTGGCTTaGCGCTGCTGCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGRSSLA*RCCWNL
Trigger: CAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCGGCTGCTGTCTCCTaGCTCTCTGGTGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGSAAVS*LSGVPW
Trigger: CCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCCACAGGCCAGCAGCTaGTGGAGCTCAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGPQASS*WSSGSM
Trigger: CATGGACCCTGAGCTCCAGCAGCTGCTGGCCTGTGG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGGACGCCGGAGCTCACTaGCTTGCCGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWDAGAH*LAAAAG
Trigger: TCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTC...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGLGQEG*DPEMAG
Trigger: TCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCCACCCGTTGCAGGTaGCCCACTTGGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWPTRCR*PTWTWS
Trigger: AGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGAGAGCCACCGAGTGGTaGCGACATCCCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWRATEW*RHPQPP
Trigger: TGGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCT...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGAGGATGCCTCCATGGTaGAGGATGCCGGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGRMPPW*RMPGVA
Trigger: TGCCACCCCCGGCATCCTGCACCATGGAGGCATCCT...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTGTGTTGCCTCCTCCTaGCCTCTCAGCGCATCCAGT +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGCVASS*PLSASS
Trigger: ACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCACCTCCTCCTTGGGTaGCACCTCTGCCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGHLLLG*HLCLCF
Trigger: GAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTGAGTGGGTGGAGCTaGAGCTGCCCAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRVSGWS*SCPAVS
Trigger: GGACACAGCTGGGCAGCTCCAGCTCCACCCACTCAC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCAGGCCAGCAGCTGCTaGAGCTCAGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGQASSC*SSGSMS
Trigger: AGACATGGACCCTGAGCTCCAGCAGCTGCTGGCCTG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTCCAGCTGCCCGAGATaGAGGTGGGCAGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGSSCPR*RWAGCG
Trigger: TCCACACCCTGCCCACCTCCATCTCGGGCAGCTGGA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCAGGGTCAGAGCCCTGTaGATGCCTGCTCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGRVRAL*MPAQNL
Trigger: CAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCT...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGGACAGGCATGGAGGTaGCTACAGGGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGGQAWR*LQGQSP
Trigger: AGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGCCCTCGGGCCTCCATaGGGATGCCTCCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGALGPP*GCLHGA
Trigger: TGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGTCCGGCGCAGCACTTaGCGGACGATCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGVRRST*RTILGS
Trigger: GCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGAC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGAGCCAGGTGAATTTATaGACAGAGCCTGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPSQVNL*TEPVGM
Trigger: CATCCCCACAGGCTCTGTGCATAAATTCACCTGGCT...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGSPVDA*SEPAGA
Trigger: TGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCT...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCCACATCGATGGTACTaGGGCTTCTACCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGPHRWY*GFYPAC
Trigger: ACACGCTGGGTAGAAGCCCCAGTACCATCGATGTGG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCCCCTGCCCTGGGCTTaGGAGCACATACTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWPLPWA*EHILGK
Trigger: CTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTATGATGCTCTCAGTTaGGGGGACCCTCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGYDALS*GDPLGL
Trigger: GAGTCCCAGAGGGTCCCCCCAACTGAGAGCATCATA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTCACTGGCTTGCCGCTaGTGCTGGAACTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGSLACR*CWNLEK
Trigger: CTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGWRRFL*GVVAAD
Trigger: GTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGGGGCGCCCCTGCCCTaGGCTTGGGAGCACATACTT +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLGAPLP*AWEHIL
Trigger: AAGTATGTGCTCCCAAGCCCAGGGCAGGGGCGCCCC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp AGAGGCAGGCAGTCCTGGCCTGCTATTGTGGGAGCTTaGTCTGACCCTGGGTTGGCTATACCTGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: RGRQSWPAIVGA*SDPGLAIPGSP
Trigger: AGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCAGGACTGCCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp GGAGACAGAGGGGCTCACTGGGCAGCCGGGTGGAAGTaGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GDRGAHWAAGWK*LQGVHVISASA
Trigger: GGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCCGGCTGCCCAGTGAGCCCCTCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCTTGGACCTGGTCTCTaGAAGCATCCAGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGLGPGL*KHPGVL
Trigger: CAAAACCCCTGGATGCTTTCAGAGACCAGGTCCAAG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCATGGTTGTCTGTGTTaGCTCCTCCTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWHGCLC*LLLASQ
Trigger: CTGAGAGGCCAGGAGGAGGCAACACAGACAACCATG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGCTCCATGGTGCAGGATaGCGGGGGTGGCATGCAAAG +
Preference number: 4 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRLHGAG*RGWHAK
Trigger: CTTTGCATGCCACCCCCGGCATCCTGCACCATGGAG...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCCCTGTCCTGTCTCTTaGATCACCAGCCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGPCPVS*ITSPVF
Trigger: AAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCCAGCTTTCTGGGGAATaGTGGGATCCTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGQLSGE*WDPGFT
Trigger: AGTGAAGCCAGGATCCCAGCATTCCCCAGAAAGCTG...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGVDHLQ*LRLKEP
Trigger: TGGCTCTTTGAGACGCAGCCATTGGAGATGATCCAC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLKTELP*PSGLHE
Trigger: CTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTTGGGAGCACATACTTaGCAAGACAGAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGLGAHT*QDRAPL
Trigger: CAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGGAATGCTGGGATCCTaGCTTCACTTCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRGMLGS*LHFQPQ
Trigger: CTGTGGCTGGAAGTGAAGCCAGGATCCCAGCATTCC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp GCCTCAGACTGGAGGCTAGACATGGAGCTAAGAGCCTaGTGCACTGCTTCTTCGATGTCCAGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASDWRLDMELRA*CTASSMSSSLA
Trigger: AGCCAGGCTGCTGGACATCGAAGAAGCAGTGCACAAGGCTCTTAGCTCCATGTCTAGCCTCCAGTCTGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTCGCCCTTCAGCTCCTaGATCTCTGAGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRSPFSS*ISERSS
Trigger: AGAGCTGCGCTCAGAGATTCAGGAGCTGAAGGGCGA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTTCTGGGGGACACCCTaGGACAGAGGCAACACCGAA +
Preference number: 4 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRFWGTP*DRGNTE
Trigger: TTCGGTGTTGCCTCTGTCTCAGGGTGTCCCCCAGAA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACCCACTGGATTGGTTTaGGGCTGGCAGAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRPTGLV*GWQRFS
Trigger: ACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTTGTCCCCTGCTGTCCTaGATAGCATATACCGGGGCG +
Preference number: 4 (lower is better)
Translates to: IFCSSLWMAACGSLRLEACPLLS*IAYTGA
Trigger: CGCCCCGGTATATGCTATGCAGGACAGCAGGGGACA...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTTCAGAGCCCTGTGGATaGCTGCTCAGAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IFCSSLWMAACGSLRLEASEPCG*LLRTCW
Trigger: CCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGA...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGGCAGGAGTGGATGCTTaGAGAACATCTTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGAGVDA*RTSWTG
Trigger: GCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGC...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGGCTGCTGCTGGAACTTaGAGAAGGTTTCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGAAAGT*RRFLWG
Trigger: CCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGC...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATC +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGLMLNI*ARRDEI
Trigger: GATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTCTCCAGCCGGAACCTaGCTGGTTTGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCVISHLVLRMALGLFLGSPAGT*LVCRCC
Trigger: GCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCAGGCTTTCTCCCACTaGATTGGTTTGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGQAFSH*IGLRLA
Trigger: TGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp TTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTTaGACGAGGGGTGGATCTCTGACCTGGCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LSSGWLSAFSWV*TRGGSLTWLEL
Trigger: AAGCTCCAGCCAGGTCAGAGATCCACCCCTCGTCAAAACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp GGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTaGAGCCTGGAGGGGCTGTGGAGTAACTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GVHVISASARSL*SLEGLWSNCLS
Trigger: GCTAAGGCAGTTACTCCACAGCCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTCCCACCGCAAACTGTaGAGGCTGTGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLSHRKL*RLCRSP
Trigger: AGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGA...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGTCCTTCTGGTCTTCCTaGGGCTGCCTTCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGSFWSS*GCLPFL
Trigger: CAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGA...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAAGGTGGCCTGGACGTTaGCACCTGACACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTRWPGR*HLTQVP
Trigger: GGGAACCTGTGTCAGGTGGCAACGTCCAGGCCACCT...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRASRPH*IALNLL
Trigger: GAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGCTCACCCTGCCCAATaGTGTCTAAGGGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESAHPAQ*CLREGS
Trigger: AGACCCTTCCCTTAGACAGCATTGGGCAGGGTGAGC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTAAGGGTTCTCTCGGCTaGTGTCTCCTGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LCVISHLVLRMALGLFLGKGSLG*CLLPLW
Trigger: CCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTT...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTTGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSCLLRT*WCRLWA
Trigger: GGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCA...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTCTGCCAGGGAGCCCATaGGACAGTTTTCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IFCSSLWMAACGSLRLEALPGSP*DSFQRA
Trigger: GGCTCTTTGAAAACTGTCCCATGGGCTCCCTGGCAG...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAATGAGGATGCCTCCATaGTGCAGGATGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTMRMPP*CRMPGV
Trigger: CACCCCCGGCATCCTGCACCATGGAGGCATCCTCAT...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGAGGTGGGCAGGGTGTaGATCCTGAGATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGEVGRV*ILRFSA
Trigger: AGCTGAGAATCTCAGGATCCACACCCTGCCCACCTC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LCVISHLVLRMALGLFLGCWCRL*ASAVAK
Trigger: TTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp TGGCCTGCTATTGTGGGAGCTTTGTCTGACCCTGGGTaGGCTATACCTGGCTCACCTGGCTTATGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WPAIVGALSDPG*AIPGSPGLWSC
Trigger: ACAAGACCATAAGCCAGGTGAGCCAGGTATAGCCAACCCAGGGTCAGACAAAGCTCCCACAATAGCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
3UTR CAA 72 bp GTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTaGCTCAGCCCCGGGTCCTCACCAGGGATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQSQTESSVMSS*LSPGSSPGIKA
Trigger: TGCCTTAATCCCTGGTGAGGACCCGGGGCTGAGCAAACTGGACATGACACTGCTCTCTGTTTGAGATTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLIQRIH*TSPSVG
Trigger: GCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGAT...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCCAGCTGTGTCCTCCTaGACCAGCAGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVPAVSS*TSSPCW
Trigger: CCAGCAGGGACTGCTGGTTCAGGAGGACACAGCTGG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGCAGGGTGTGGATCCTaGGATTCTCAGCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSAGCGS*DSQLPH
Trigger: ATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGC...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGCTTGGGTGGCACCTCTaGCTCTGTTTCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGLGWHL*LCFSFT
Trigger: GGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAG...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACC +
Preference number: 4 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLPATTS*RVIPRT
Trigger: GGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGCCCAAACATCCAGGTaGAGGACTGTGTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLAQTSR*RTVSQP
Trigger: AGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGGAACCTGGCTGGTTTaGAGGTGCTGCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSGTWLV*RCCSPE
Trigger: CTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTTGGTGTCCCATGGCCTaGAGAGCCTTTTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LCVISHLVLRMALGLFLGWCPMA*RAFWLF
Trigger: GAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCA...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGGCGCATCCAGTGGCTTaGTCTCAAACATCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRAHPVA*SQTSVW
Trigger: CCAGACAGATGTTTGAGACCAAGCCACTGGATGCGC...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCTCTCAAAGAGCTTTCTaGTTCCCTGTACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPALGNEVQAHMCECELGSQRAF*FPVHLQ
Trigger: CTGGAGATGTACAGGGAACCAGAAAGCTCTTTGAGA...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGACCTGGCTGGGGTCCTaGTTGAAGGCATCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLTWLGS*LKASRG
Trigger: ACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGT...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGAGATCCGGAGATGGCTaGAAGTCCTTCTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLRSGDG*KSFSST
Trigger: GGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCT...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp ATCTTTTGTAGTTCCCTGTGGATGGCTGCTTGTGGGAGCCTCAGACTGGAGGCTGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: IFCSSLWMAACGSLRLEADEIRR*LEVLLV
Trigger: GACGAGAAGGACTTCCAGCCATCTCCGGATCTCATC...AGCCTCCAGTCTGAGGCTCCCACAAGCAGCCATCCACAGGGAACTACAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QGVHVISASARSLLSLEGFLPLD*FEAGRD
Trigger: ATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLLSGVP*PAEPFG
Trigger: GCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGACCTTTCTGCCCAGCATaGCTGATATCCGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLARVCSFSWATSVLTRPFCPA*LISVFF
Trigger: GAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGG...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGCTGGACGTTGCCACCTaGCACAGGTTCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPELDVAT*HRFPGS
Trigger: GCTGCCAGGGAACCTGTGTCAGGTGGCAACGTCCAG...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGGAGGTTGTCCCCTCTaGTGCTCTCAGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSGGCPL*CSQLPG
Trigger: CCCTGGCAGCTGAGAGCATCAGAGGGGACAACCTCC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTAGCTCTAAAGGACTCTaGTCCTGGATAGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSSSKGL*SWIEGR
Trigger: CCGCCCCTCTATCCAGGAGCAGAGTCCTTTAGAGCT...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGCTGAAGGCTCACCCTaGCCAATGCTGTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTAEGSP*PMLSKG
Trigger: TCCCTTAGACAGCATTGGGCAGGGTGAGCCTTCAGC...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSGLLCL*SWPAAA
Trigger: TGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACC...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTCAGAACCTGCTGGTaGAGGCTTTGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVLRTCW*RLWASA
Trigger: CGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGCTTGCCGCTGCTGCTaGAACTTGGAGAAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GWKLLQGVHVISASARSLACRCC*NLEKVS
Trigger: AGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCCTCGGCATCCTGGATaGCGCATAGAGGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSPRHPG*RIEVPS
Trigger: AGACGGAACCTCTATGCGCCATCCAGGATGCCGAGG...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTCTCGTACCACATCGATaGTACTGGGGCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: LCVISHLVLRMALGLFLGLVPHR*YWGFYP
Trigger: TGGGTAGAAGCCCCAGTACCATCGATGTGGTACGAG...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCTGTCTCCTGCCTCTCTaGTGTCCCATGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSCLLPL*CPMACR
Trigger: TCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACA...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGCTTGCCGCTGCTaGTGGAACTTGGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSLACRC*WNLEKV
Trigger: AACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAG...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCCAGCAGCTGCACACTaGTTCTTTCAGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSPAAAH*FFQGPC
Trigger: GCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRFFLAS*NGAWAT
Trigger: TGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAA...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGAAAGGACTCTGCTCCTaGATAGAGGGGCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPEKGLCS*IEGREP
Trigger: GGGCTCCCGCCCCTCTATCCAGGAGCAGAGTCCTTT...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGAATCACCTCCTCCTTaGGTGGCACCTCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVESPPP*VAPLPL
Trigger: CAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSAGFRD*GPNIQV
Trigger: CACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGC...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCATAGAGGTTCCGTCTaGAACAGCTTCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLHRGSV*NSFTVF
Trigger: GAAGACGGTGAAGCTGTTTCAGACGGAACCTCTATG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCAGCTGGCCAGCAGCTaGACACTGCTTCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSQLASS*TLLLSG
Trigger: CCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCTACCTGCTCTCTGCTaGCAGAAGTCAGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVLPALC*QKSGHE
Trigger: TTCATGCCCTGACTTCTGTCAGCAGAGAGCAGGTAG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSNADSA*LPGDLE
Trigger: CTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTT...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTCACTGCATTGCTTTaGATCTCCTCCCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSLTALL*ISSRQA
Trigger: TGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVWKTSF*RDTCPE
Trigger: TTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCA...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR GCA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSIRFLP*FLQWSL
Trigger: CAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGAT...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCC +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVSQTSV*QLGHHP
Trigger: GGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGA...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp AAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCTGTTGCTCTTGTTGGTaGATCATCTCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: KLLQGVHVISASARSLLSCCSCW*IISNGC
Trigger: GCAGCCATTGGAGATGATCCACCAACAAGAGCAACA...GCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTGCCTGCAGAGCCTTTTaGCTGTTCTTCCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSACRAF*LFFLEV
Trigger: AACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGC...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGGCTTGCAGAACATCTTaGACAGGCATGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPEACRTS*TGMEVA
Trigger: AGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGC...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTCTTTCTGGGGAATGCTaGGATCCTGGCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSLSGEC*DPGFTS
Trigger: GGAAGTGAAGCCAGGATCCCAGCATTCCCCAGAAAG...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTCCTCATTTGGATGGTTaGTGTAGGAGCTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: GLEASGSFFVADWTEMKVPHLDG*CRSYLH
Trigger: ATGCAGGTAGCTCCTACACCAACCATCCAAATGAGG...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTTGGCTGTTCTTCCTaGAGGTTGTCCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSFGCSS*RLSPLM
Trigger: CATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR TCA 90 bp GTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCAGTGTCATGTCCAGTTTTCAAAGAGCCAGGTaGATTTATGCACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VFLEPLVQSQTESSVMSSFQRAR*IYAQSL
Trigger: CAGGCTCTGTGCATAAATTCACCTGGCTCTTTGAAA...ACTGGACATGACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS GCA 90 bp CAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTaGAGGATGCCGGGGGTGGCATGCAAAGTCCGAAGGGTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: QSSPGPRASMRMPPW*RMPGVACKVRRVLS
Trigger: CGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCCGGGACCTCCTTCTaGCCCGCCTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGSGTSF*PASRAW
Trigger: CCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS CCA 90 bp AGACAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATaGTGCAGGATGCCGGGGGTGGCATGCAAAGTCCGAAGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RQSSPGPRASMRMPP*CRMPGVACKVRRVL
Trigger: GAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CTGCCCTGGGCTTGGGAGCACATACTTGGCAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTGCAGGATGCC +
Preference number: 5 (lower is better)
Translates to: LPWAWEHILGKTELP*PSGLHEDASMVQDA
Trigger: GGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp CAAGGGAGATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTTaGAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGACC +
Preference number: 5 (lower is better)
Translates to: QGRSPESPAPGWGPG*RHPEVGSQRASEQT
Trigger: GGTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: GQAWRWLQGQSPVDA*SEPAGAGFGPQRLP
Trigger: TGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GCTCACTGGCTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGACCCTCTGGGGCTGAGGGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: AHWLAAAAGTWRRFL*GVVAADPLGLRDEG
Trigger: TCCCTCATCCCTCAGCCCCAGAGGGTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CCTGCTGGTCCACGTCTGTCCGGCGCAGCACTTGACGGACGATCCTaGGAAGCTCACCACACACCAGCTCCTCCTTCCGTATGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: PAGPRLSGAALDGRS*EAHHTPAPPSVCRG
Trigger: GCCCCTACATACGGAAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp AGGGGCTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTaGGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: RGSGACWMESSWWWP*VGWSGSSVTAAGRV
Trigger: TACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS GCA 90 bp GGGACCTCCTTCTTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAAGGAATCTCCACCCGGCTGCAGTAC +
Preference number: 5 (lower is better)
Translates to: GTSFLPASRAWKTSF*RDTCPEGISTRLQY
Trigger: GTACTGCAGCCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GCCTCCATGAGGATGCCTCCATGGTGCAGGATGCCGGGGGTGGCATaGAAAGTCCGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASMRMPPWCRMPGVA*KVRRVLSAAVSCLS
Trigger: AGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCTCATGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CCTGGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCCCTGATGGCCGGAGTCCCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PGLSAHPVAWSQTSV*QLGHHPLMAGVPPA
Trigger: AGCCGGAGGGACTCCGGCCATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTTaGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LRGLLDGVLLVVALS*VVRIFCHSSWESRR
Trigger: CCTCCTACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS TCA 90 bp TGGGAGTGCAGGCTGGCACCTGCTGGTTTAGATGTCAGGGTGTGGTaGGTTAGAGGGGCAGTCTTCAGGGAGGTGTCTGCTGCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: WECRLAPAGLDVRVW*VRGAVFREVSAARR
Trigger: CCTCCGGGCAGCAGACACCTCCCTGAAGACTGCCCCTCTAACTCACCACACCCTGACATCTAAACCAGCAGGTGCCAGCCTGCACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS GCA 90 bp TCTGTCTGCCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTaGTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGGGGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SVCLSPAGTWLVCRC*SPEPSAGFRDWGPN
Trigger: GTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTC +
Preference number: 5 (lower is better)
Translates to: EVATGSEPCGCLLRT*WCRLWASAVAKRRF
Trigger: GAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp TCTTGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATaGCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: SWTGMEVATGSEPCG*LLRTCWCRLWASAV
Trigger: AACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GCCAGTTCTCAAAGATCCAGCGCATACACTGAACATCGCCCTCAGTaGGCTCCTCCGAACCGAGGACCTCCGCCAGGTCCTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: ASSQRSSAYTEHRPQ*APPNRGPPPGPQPQ
Trigger: CTGTGGCTGAGGACCTGGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp CCAATGGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGCTCCTCCGAACCGAGGACCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PMASSRQFSKIQRIH*TSPSVGSSEPRTSA
Trigger: GGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp GCAGGTCCAGAACTTGGGTCTGTTGGCGGCTCCCACCGCAAACTGTaGAGGCTGTGCAGGTCTCCTTTGTCTATGCAGCTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AGPELGSVGGSHRKL*RLCRSPLSMQLASS
Trigger: GCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GCTCCCACCGCAAACTGTGAAGGCTGTGCAGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCACACTGCTTCTTTCAGGGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: APTANCEGCAGLLCL*SWPAAAHCFFQGPC
Trigger: GCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp ATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTaGCAAACGCAGATTCTGCATGGCTTCCTGGAGATCTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: MPAQNLLVQALGLSG*QTQILHGFLEIWSP
Trigger: GGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTaGAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATG +
Preference number: 5 (lower is better)
Translates to: ATGSEPCGCLLRTCW*RLWASAVAKRRFCM
Trigger: CATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CGGAACCTGGCTGGTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTaGGTTCAGAGATTGGGGCCCAAACATCCAGGTGCAGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: RNLAGLQVLLPRAFC*VQRLGPKHPGAGLC
Trigger: ACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGGTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: RRVLSAAVSCLSGVP*PAEPFGCSSWRLSP
Trigger: AGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GAGFGPQRLPNADSA*LPGDLEPQTLEGKQ
Trigger: TTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SEPCGCLLRTCWCRL*ASAVAKRRFCMASW
Trigger: CCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCTGGTGACCCACCCGTaGCAGGTGACCCACTTGGAC +
Preference number: 5 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWLVTHP*QVTHLD
Trigger: GTCCAAGTGGGTCACCTGCAACGGGTGGGTCACCAG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGCGGAACCTGGCTGGTTaGCAGGTGCTGCTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: QGVHVISASARSLLSLEGRNLAG*QVLLPR
Trigger: TCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCG...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTTGAGCCTGGAGGGGTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QGVHVISASARSLLSLEGCPAQH*TDDPGK
Trigger: CTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACA...CCCCTCCAGGCTCAACAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CCTCCAGCTCTAGGCAATGAGGTGCAGGCTCACATGTGTGAGTGTGAGCTGGGCGCCCTGTCCTGTCTCTaGCATCACCAGCCCCGTCTT +
Preference number: 5 (lower is better)
Translates to: PPALGNEVQAHMCECELGALSCL*HHQPRL
Trigger: AAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGC...GCCCAGCTCACACTCACACATGTGAGCCTGCACCTCATTGCCTAGAGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS GCA 90 bp ACATGTCTGTCTGTCTGCCTGTCTCCAGCCGGAACCTGGCTGGTTTaGAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGG +
Preference number: 5 (lower is better)
Translates to: TCLSVCLSPAGTWLV*RCCSPEPSAGFRDW
Trigger: CCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGACAGACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp TTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTGCCGAGATACCTaGCCGGAAGGAATCTCCACCCGGCTGCAGTACCTTACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LPASRAWKTSFCRDT*PEGISTRLQYLTGF
Trigger: AAAGCCTGTAAGGTACTGCAGCCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VCRCCSPEPSAGFRD*GPNIQVQDCVSALL
Trigger: GAGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TTGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCTCCAGGGCCTaGAAAACCTCTTTCTGCCGAGATACCTGCCCGGAAGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: LIVVSGTSFLPASRA*KTSFCRDTCPEGIS
Trigger: GGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GACCCTCTGGGACTCCTCAGTAGCAGGTCCAGAACTTGGGTCTGTTaGCGGCTCCCACCGCAAACTGTGAAGGCTGTGCAGGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: DPLGLLSSRSRTWVC*RLPPQTVKAVQVSF
Trigger: AAAGGAGACCTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCCCAGAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TGGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATaGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: WLPGDLEPQTLEGKQ*FLLVFLRLPSLSAQ
Trigger: CTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTTGGACAGGCATaGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: PQWQEWMLAEHLGQA*RWLQGQSPVDACSE
Trigger: TTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp TCTGGGAGAGGTACCCAAGACTGGTGGGAGACAGAGGGGCTCACTGGGCAGCCGCTCTTCTGTCCTCATTaGGATGGTTGGTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: SGRGTQDWWETEGLTGQPLFCPH*DGWCRS
Trigger: GCTCCTACACCAACCATCCAAATGAGGACAGAAGAG...CGGCTGCCCAGTGAGCCCCTCTGTCTCCCACCAGTCTTGGGTACCTCTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGSWLSV*PPPGLS
Trigger: TGAGAGGCCAGGAGGAGGCAACACAGACAACCATGA...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCCAGGTTCCCTCATGGTaGTCTGTGTTGCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGQVPSW*SVLPPP
Trigger: AGGAGGAGGCAACACAGACAACCATGAGGGAACCTG...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS TCA 90 bp GCAGCTTGGACATCACCCCCTGATGGCCGGAGTCCCTCCGGCTCCTaGTCTGAGCTGTTGGTAAAGGAGCCTTCCTCAAACTTTCGAGAG +
Preference number: 5 (lower is better)
Translates to: AAWTSPPDGRSPSGS*SELLVKEPSSNFRE
Trigger: CTCTCGAAAGTTTGAGGAAGGCTCCTTTACCAACAGCTCAGATCAGGAGCCGGAGGGACTCCGGCCATCAGGGGGTGATGTCCAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp CAGACCTCACTGCATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTaGCTTCGTGGATGGTGCCCTCGGCATCCTGGATGGCGCATAGAG +
Preference number: 5 (lower is better)
Translates to: QTSLHCFESPPDRQP*LRGWCPRHPGWRIE
Trigger: CTCTATGCGCCATCCAGGATGCCGAGGGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 90 bp GCTGGGATCCTGGCTTCACTTCCAGCCACAGGCCTGATGCTGCCTTaGGTAACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTTGG +
Preference number: 5 (lower is better)
Translates to: AGILASLPATGLMLP*VTPVAGVDACRTSW
Trigger: CCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGCAGCATCAGGCCTGTGGCTGGAAGTGAAGCCAGGATCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTGACTTCGTG +
Preference number: 5 (lower is better)
Translates to: GIQRSGLKEPASRPH*IALNLLPTGSLDFV
Trigger: CACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp TCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACCACATCGATGGTACTGGGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SKSHRVVPTSPATTS*RVIPRTTSMVLGLL
Trigger: TAGAAGCCCCAGTACCATCGATGTGGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TCCGAAGCTCAGGGTGGATGTGTTTGTAGAGACGCCGGAGCTCACTaGCTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SEAQGGCVCRDAGAH*LAAAAGTWRRFLWG
Trigger: CCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTCTCTACAAACACATCCACCCTGAGCTTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CACCTGACACAGGTTCCCTGGCAGCCGGCCTCTCGTGATCGCCAATaGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTGAA +
Preference number: 5 (lower is better)
Translates to: HLTQVPWQPASRDRQ*HLAASSQRSSAYTE
Trigger: TTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGCCAGGGAACCTGTGTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GAAGGACCACTTTTCCAGCTGCCCGAGATGGAGGTGGGCAGGGTGTaGATCCTGAGATTCTCAGCTGCCCCATCTCCATGGTGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: EGPLFQLPEMEVGRV*ILRFSAAPSPWWSL
Trigger: TAGACTCCACCATGGAGATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGCCCACCTCCATCTCGGGCAGCTGGAAAAGTGGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTaGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LWASAVAKRRFCMAS*RSGAPDPRGEAMVP
Trigger: AGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GTGGTGGCCTTGAGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTaGGAGAGTAGGAGGGGGAGGAACAGAGGCATTATGGGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: VVALSWVVRIFCHSS*ESRRGRNRGIMGVQ
Trigger: CTGCACTCCCATAATGCCTCTGTTCCTCCCCCTCCTACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp TGCACATCTCCTTTGTCCCAGCCTGATCCTGGATATCTCTCTGGTAGAGCAGGGGAGGTGGCCTGGACGTaGCCACCTGACACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: CTSPLSQPDPGYLSGRAGEVAWT*PPDTGS
Trigger: GGAACCTGTGTCAGGTGGCAACGTCCAGGCCACCTC...CCCTGCTCTACCAGAGAGATATCCAGGATCAGGCTGGGACAAAGGAGATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESGMDPR*IVVSGT
Trigger: GGTCCCGGAGACCACAATCAACCTGGGGTCCATCCC...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGGCCTGCAGAGCCTTTaGGCTGTTCTTCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SSLARVCSFSWATSVLTRGLQSL*AVLPGG
Trigger: ACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCC...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS TCA 90 bp ACACTATTGACTGCTAGTGCGCTCTCTGCGCCAGAAGTCAGGGCATaGAGCTGTCCCCTGCTGTCCTGCATAGCATATACCGGGGCGTCA +
Preference number: 5 (lower is better)
Translates to: TLLTASALSAPEVRA*SCPLLSCIAYTGAS
Trigger: TGACGCCCCGGTATATGCTATGCAGGACAGCAGGGGACAGCTTCATGCCCTGACTTCTGGCGCAGAGAGCGCACTAGCAGTCAATAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213113.2
CDS GCA 90 bp AGAGCGGACATCGCCAGGAATCACCTCCTCCTTGGGTGGCACCTCTaGCTCTGTTTCTCTTTCACCCTTCAGAGTGTCCAGGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: RADIARNHLLLGWHL*LCFSFTLQSVQGTG
Trigger: ACCTGTTCCCTGGACACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp TCCTCTGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATGGCTaGGTCTCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SSGFCCSCWWIISNG*VSKSHRVVPTSPAT
Trigger: GGTGGCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TTGTCTGTGTTGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTTaGTCTCAAACATCTGTCTGGCAGCTTGGACATCACCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: LSVLPPPGLSAHPVA*SQTSVWQLGHHPLM
Trigger: CATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TCGCTGATGCTGAACATCTGGGCCAGGAGGGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTCCACCTCGATCTCACGAATGGCATC +
Preference number: 5 (lower is better)
Translates to: SLMLNIWARRDEIRR*LEVLLVHLDLTNGI
Trigger: GATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CCAGAGTGTAGAGCGGACATCGCCAGGAATCACCTCCTCCTTGGGTaGCACCTCTGCCTCTGTTTCTCTTTCACCCTTCAGAGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: PECRADIARNHLLLG*HLCLCFSFTLQSVQ
Trigger: CTGGACACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCTACACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCGCTGCTGCTGGAACTaGGAGAAGGTTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWRCCWN*EKVSLG
Trigger: CCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGCCGGAGCTCACTGGCTaGCCGCTGCTGCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: GWKLLQGVHVISASARSLPELTG*PLLLEL
Trigger: AAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGG...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTGCCCCTGCCCTGGGCTaGGGAGCACATACTTGGCAA +
Preference number: 5 (lower is better)
Translates to: LCVISHLVLRMALGLFLGAPALG*GAHTWQ
Trigger: TTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGGC...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp TCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAGTCAGTTCCCCAAAGGAGGCCTGATGCTGCCTaGAGTAACCCCAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SVLSAGQPLYSPESVPQRRPDAA*SNPSGR
Trigger: CCTGCCACTGGGGTTACTCAAGGCAGCATCAGGCCT...CCTTTGGGGAACTGACTCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS GCA 90 bp TTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCTaGCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FEAGRDSVSKTCLSV*LSPAGTWLVCRCCS
Trigger: GGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCAGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp TTCCTCCTCTGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCACCGAGTGGTGCCGACATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: FLLWFLLLLLVDHLQ*LRLKEPPSGADIPS
Trigger: GCTGGGGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CCTGGACCCTTCCCCTCTTCCTCCTCTGGTTTCTGTTGCTCTTGTTaGTGGATCATCTCCAATGGCTGCGTCTCAAAGAGCCACCGAGTG +
Preference number: 5 (lower is better)
Translates to: PGPFPSSSSGFCCSC*WIISNGCVSKSHRV
Trigger: CACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAAGAGGGGAAGGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGAAGCGCATCCAGTGGCTaGGTCTCAAACATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SSLARVCSFSWATSVLTRSASSG*VSNICL
Trigger: CAGACAGATGTTTGAGACCAAGCCACTGGATGCGCT...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGG +
Preference number: 5 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSWLGSW*KASRGR
Trigger: CCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCA...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTGGAATCACCTCCTCCTaGGGTGGCACCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LCVISHLVLRMALGLFLGGITSS*GGTSAS
Trigger: AGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCC...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGGACTGTGTCTCAGCCTaGCTCACGGGGTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: GWKLLQGVHVISASARSLDCVSA*LTGSVT
Trigger: GGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTC...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGTCCTCACCAGGGATTAAGGCAGCCAGATTCCATAACCAAAGAAAAAGGCTGCTGCTGGTGCAGGCTTaGGGCCTCAGCGGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GSSPGIKAARFHNQRKRLLLVQA*GLSGCQ
Trigger: TTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAG...CAGCCTTTTTCTTTGGTTATGGAATCTGGCTGCCTTAATCCCTGGTGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS GCA 90 bp CCTAGTCTCAAAGAGCTTTCTGGTTCCCTGTACATCTCCAGTGGCTaGAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTCCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PSLKELSGSLYISSG*RFPHGCLCCLLLAS
Trigger: AGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAACCAGAAAGCTCTTTGAGACTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp AAGTCCTTCTCGTCCACCTCGATCTCACGAATGGCATCCAAAGGCTaGGTCTCAAAGATCCAACGAGTTGCACTGACATCCGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: KSFSSTSISRMASKG*VSKIQRVALTSGRA
Trigger: AGCCCTGCCGGATGTCAGTGCAACTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp CTCAGCCTTGCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTaGCAACTCGCTCATAGGGTAGGTCTCAAACAGCCAACGGATAGT +
Preference number: 5 (lower is better)
Translates to: LSLAHGVCDLRFSLL*QLAHRVGLKQPTDS
Trigger: ACTATCCGTTGGCTGTTTGAGACCTACCCTATGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GTCCAGGGAACAGGTTTCAAACAGATGTCGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATCCGGAGATGGCTGGAAGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VQGTGFKQMSLMLNI*ARRDEIRRWLEVLL
Trigger: GAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAACCTGTTCCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp GGGCCTGCACATCCACGCTGCGAGATGCTTCCTTCTCCAGGGTTTGCACTTGGCGGCAGAATCAGTGTTTaGTCCTCTGTTTATGTTCCC +
Preference number: 5 (lower is better)
Translates to: GPAHPRCEMLPSPGFALGGRISV*SSVYVP
Trigger: GGGAACATAAACAGAGGACAAAACACTGATTCTGCC...GCCAAGTGCAAACCCTGGAGAAGGAAGCATCTCGCAGCGTGGATGTGCAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTCTGTGCAGGTCTCCTTaGTCTATGCAGCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LCVISHLVLRMALGLFLGLCRSP*SMQLAS
Trigger: GCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAG...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp AGCAGCCTGGCTAGGGTCTGTTCTTTCAGCTGGGCAACCTCTGTACTCACCCGATTCCTGCAATGGAGCTaGGGCTACAGGTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: SSLARVCSFSWATSVLTRFLQWS*GYRFPI
Trigger: AATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAA...TCGGGTGAGTACAGAGGTTGCCCAGCTGAAAGAACAGACCCTAGCCAGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS TCA 90 bp TTTCAAACAGATGTCGCTGATGCTGAACATCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGAAGTCCTTCTCGTCCACCTCGATCT +
Preference number: 5 (lower is better)
Translates to: FQTDVADAEHLGQEG*DPEMAGSPSRPPRS
Trigger: AGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp GAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACAGAGAGCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: EAGTRVFLEPLVQSQTESSHWIG*RLAEIQ
Trigger: CTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGA...GCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp TGTGGAGTAACTGCCTTAGCATGGGAGAAGTGTGCAGGCAGAGCTGGGGTCTGGCTACAGGTTTCCCATTaGGAAGGACCACTTTTCCAG +
Preference number: 5 (lower is better)
Translates to: CGVTALAWEKCAGRAGVWLQVSH*EGPLFQ
Trigger: CTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAG...CCAGACCCCAGCTCTGCCTGCACACTTCTCCCATGCTAAGGCAGTTACTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS TCA 90 bp CACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTTaGGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: HPAAVPYRLSPTGLV*GWQRFSLKDMSVCL
Trigger: CAGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp GGGGGTTTCTTTCTTGGAAGCATGGTGGATTCCGCTTTGGAGGGTTTTGTCTCTCTTGGGAGCACATACTaGGCAAGACAGAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GGFFLGSMVDSALEGFVSLGSTY*ARQSSP
Trigger: AGGGGAGCTCTGTCTTGCCAAGTATGTGCTCCCAAG...AGAGACAAAACCCTCCAAAGCGGAATCCACCATGCTTCCAAGAAAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS GCA 90 bp CCTTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACAGGTTTCCCATTTGGAAGGACCACT +
Preference number: 5 (lower is better)
Translates to: PFCPAWLISVFFLAS*NGAWATGFPFGRTT
Trigger: AGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp TGCCTTCCCTTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCCATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: CLPFLPSMADIRFLP*FLQWSLGYRFPIWK
Trigger: CTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 90 bp GAAGCAATGGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTaGCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: EAMVPSGLPEAAFPF*PAWLISVFFLASCN
Trigger: ATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp ATCTCCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ISTRLQYLTGFLPLD*FEAGRDSVSKTCLS
Trigger: AGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp AAGGAATCTCCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTaGATTGGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTC +
Preference number: 5 (lower is better)
Translates to: KESPPGCSTLQAFSH*IGLRLAEIQSQRHV
Trigger: GACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGGAGATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp GCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTTaGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AWLISVFFLASCNGA*ATGFPFGRTTFPAA
Trigger: GGCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 90 bp CTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATaGAGCTTGGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: LPSMADIRFLPCFLQ*SLGYRFPIWKDHFS
Trigger: GGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS-3UTR CAA 90 bp GATGAAGAGGCAGGCACCCGGGTTTTTCTGGAGCCTTTAGTCCAATCTCAAACATGTTCTTCCTGGAGGTaGTCCCCTCTGATGCTCTCA +
Preference number: 5 (lower is better)
Translates to: DEEAGTRVFLEPLVQSQTCSSWR*SPLMLS
Trigger: TGAGAGCATCAGAGGGGACAACCTCCAGGAAGAACA...TGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGGTGCCTGCCTCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGCTAGAAGCTTCCGGAAGCTTCTTTGTAGCTGATTGGACTGAGATGAAAGTTGGCAGGAGTGGATGCTaGCAGAACATCTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: GLEASGSFFVADWTEMKVGRSGC*QNILDR
Trigger: CCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCC...AACTTTCATCTCAGTCCAATCAGCTACAAAGAAGCTTCCGGAAGCTTCTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CTCTGCGTGATTTCTCATCTTGTCCTCAGGATGGCTCTCGGCCTTTTCTTGGGTAAGCATCCAGGGGTTTaGTTTCAAATAGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LCVISHLVLRMALGLFLGKHPGV*FQIARV
Trigger: CACTCTGGCTATTTGAAACAAAACCCCTGGATGCTT...ACCCAAGAAAAGGCCGAGAGCCATCCTGAGGACAAGATGAGAAATCACGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp CTATGTCCTGACCTAGGTGTGTATTTTTCCCTGAGATATAATGGCTTCCCTGAGTTGCAGGTGACCCACTaGGACCTGGTCTCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LCPDLGVYFSLRYNGFPELQVTH*DLVSES
Trigger: GCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAA...CTCAGGGAAGCCATTATATCTCAGGGAAAAATACACACCTAGGTCAGGACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS-3UTR CAA 90 bp GGGTGGAAGTTGTTACAGGGAGTCCATGTTATCTCAGCTTCTGCCAGGTCACTGTATCCGTTTTCTTCCTaGCTTCCTGCAATGGAGCTT +
Preference number: 5 (lower is better)
Translates to: GWKLLQGVHVISASARSLYPFSS*LPAMEL
Trigger: AAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATA...CAGTGACCTGGCAGAAGCTGAGATAACATGGACTCCCTGTAACAACTTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111635.4
CDS CCA 72 bp CCCTCCTCAAGGGAGATCCCCCGAATCACCCGCACCTaGCTGGGGTCCTGGTTGAAGGCATCCAGAGGTCGG +
Preference number: 6 (lower is better)
Translates to: PSSREIPRITRT*LGSWLKASRGR
Trigger: CCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTGAGGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp AGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTTaGCGGACGATCCTGGGAAGCTCACCACACACCAGC +
Preference number: 6 (lower is better)
Translates to: SPCWSTSVRRST*RTILGSSPHTS
Trigger: GCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CTTGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTTaGGGGGTGGTGGCGGCAGACCCTCTGGGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LAAAAGTWRRFL*GVVAADPLGLR
Trigger: CCTCAGCCCCAGAGGGTCTGCCGCCACCACCCCCCAAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp CAGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAGCTCACCACACACCAG +
Preference number: 6 (lower is better)
Translates to: QSLLVHVCPAQH*TDDPGKLTTHQ
Trigger: CTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp CAGGGGCTCCGGGGCCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTaGAGTTGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: QGLRGLLDGVLLVVA*SWVVRIFCHSSWES
Trigger: ACTCTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGGCCCCGGAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS CAA 90 bp TCAAGGGAGATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAGCGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SREIPRITRTWLGSW*KASRGRVSKSQRAD
Trigger: GTCTGCTCGCTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGATCTCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp CTGAACCAGCAGTCCCTGCTGGTCCACGTCTGTCCGGCGCAGCACTaGACGGACGATCCTGGGAAGCTCACCACACACCAGCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LNQQSLLVHVCPAQH*TDDPGKLTTHQLLL
Trigger: AAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGGACCAGCAGGGACTGCTGGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp GCCCTGTCCTGTCTCTTGCATCACCAGCCCCGTCTTTaGCACAGAGACTCCCAGGCCACAGGCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: ALSCLLHHQPRL*HRDSQATGQQL
Trigger: CAGCTGCTGGCCTGTGGCCTGGGAGTCTCTGTGTCAAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp AGGATGCCTCCATGGTGCAGGATGCCGGGGGTGGCATaGAAAGTCCGAAGGGTTCTCTCGGCTGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RMPPWCRMPGVA*KVRRVLSAAVS
Trigger: GGAGACAGCAGCCGAGAGAACCCTTCGGACTTTGCATGCCACCCCCGGCATCCTGCACCATGGAGGCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCCTaGTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: WRWLQGQSPVDA*SEPAGAGFGPQ
Trigger: CTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CAGCTCCTCCTTCCGTATGTAGGGGCGCCCCTGCCCTaGGCTTGGGAGCACATACTTGGCAAGACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: QLLLPYVGAPLP*AWEHILGKTEL
Trigger: GAGCTCTGTCTTGCCAAGTATGTGCTCCCAAGCCCAGGGCAGGGGCGCCCCTACATACGGAAGGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CCACGTCTGTCCGGCGCAGCACTTGACGGACGATCCTaGGAAGCTCACCACACACCAGCTCCTCCTTCCGTA +
Preference number: 6 (lower is better)
Translates to: PRLSGAALDGRS*EAHHTPAPPSV
Trigger: TACGGAAGGAGGAGCTGGTGTGTGGTGAGCTTCCCAGGATCGTCCGTCAAGTGCTGCGCCGGACAGACGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp ATCCCCCGAATCACCCGCACCTGGCTGGGGTCCTGGTaGAAGGCATCCAGAGGTCGGGTCTCAAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: IPRITRTWLGSW*KASRGRVSKSQ
Trigger: CTGGCTCTTTGAGACCCGACCTCTGGATGCCTTCAACCAGGACCCCAGCCAGGTGCGGGTGATTCGGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp GGCCCTGTCCTGTCTCTTGCATCACCAGCCCCGTCTTaGACACAGAGACTCCCAGGCCACAGGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GPVLSLASPAPS*TQRLPGHRPAA
Trigger: AGCTGCTGGCCTGTGGCCTGGGAGTCTCTGTGTCAAAGACGGGGCTGGTGATGCAAGAGACAGGACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp AGCCAGGTGAATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SQVNLCTEPVGMDPR*IVVSGTSFLPASRA
Trigger: GGCCCTGGAGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAATTCACCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp CTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTGCTaGTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTGG +
Preference number: 6 (lower is better)
Translates to: LSPAGTWLVCRC*SPEPSAGFRDW
Trigger: CCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TGCCTGTCTCCAGCCGGAACCTGGCTGGTTTGCAGGTaGTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: CLSPAGTWLVCR*CSPEPSAGFRD
Trigger: ATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACCAGCCAGGTTCCGGCTGGAGACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TTCTTGCCCGCCTCCAGGGCCTGGAAAACCTCTTTCTaGCGAGATACCTGCCCGGAAGGAATCTCCACCCGG +
Preference number: 6 (lower is better)
Translates to: FLPASRAWKTSF*RDTCPEGISTR
Trigger: CCGGGTGGAGATTCCTTCCGGGCAGGTATCTCGGCAGAAAGAGGTTTTCCAGGCCCTGGAGGCGGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp ACAGGGTCAGAGCCCTGTGGATGCCTGCTCAGAACCTaGTGGTGCAGGCTTTGGGCCTCAGCGGTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: TGSEPCGCLLRT*WCRLWASAVAK
Trigger: TTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGACCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CAAAGATCCAGCGCATACACTGAACATCGCCCTCAGTaGGCTCCTCCGAACCGAGGACCTCCGCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: QRSSAYTEHRPQ*APPNRGPPPGP
Trigger: AGGACCTGGCGGAGGTCCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CAGGTTCCCTGGCAGCCGGCCTCTCGTGATCGCCAATaGCATCTAGCCGCCAGTTCTCAAAGATCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: QVPWQPASRDRQ*HLAASSQRSSA
Trigger: TGCGCTGGATCTTTGAGAACTGGCGGCTAGATGCCATTGGCGATCACGAGAGGCCGGCTGCCAGGGAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CTCTCGGCTGCTGTCTCCTGCCTCTCTGGTGTCCCATaGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LSAAVSCLSGVP*PAEPFGCSSWR
Trigger: CCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CCGAAGGGTTCTCTCGGCTGCTGTCTCCTGCCTCTCTaGTGTCCCATGGCCTGCAGAGCCTTTTGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: PKGSLGCCLLPL*CPMACRAFWLF
Trigger: GAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAGGAGACAGCAGCCGAGAGAACCCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp CTCCAGTGGCTGCAGGTTCCCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LQWLQVPSWLSV*PPPGLSAHPVA
Trigger: AGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp TGTCACAAGCCCCTCACCCTCCTGGTGACCCACCCGTaGCAGGTGACCCACTTGGACCTGGTCTCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: CHKPLTLLVTHP*QVTHLDLVSES
Trigger: GCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGGGTCACCAGGAGGGTGAGGGGCTTGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp TGGCCTGCAGAGCCTTTTGGCTGTTCTTCCTGGAGGTaGTCCCCTCTGATGCTCTCAGCTGCCAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: WPAEPFGCSSWR*SPLMLSAAREP
Trigger: GGGCTCCCTGGCAGCTGAGAGCATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp GATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTaGCCAAACGCAGATTCTGCATGGCTTCCTGGAGATCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: DACSEPAGAGFGPQR*PNADSAWLPGDLEP
Trigger: GGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp GTCAGAGCCCTGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTaGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: VRALWMPAQNLLVQA*GLSGCQTQILHGFL
Trigger: CAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACAGGGCTCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp CACCGAGTGGTGCCGACATCCCCAGCCACCACTTCCTaGCGAGTGATACCTCGTACCACATCGATGGTACTG +
Preference number: 6 (lower is better)
Translates to: HRVVPTSPATTS*RVIPRTTSMVL
Trigger: CAGTACCATCGATGTGGTACGAGGTATCACTCGGCAGGAAGTGGTGGCTGGGGATGTCGGCACCACTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp AGGCTTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTaGATGGCTTCCTGGAGATCTGGAGCCCCAGACCCT +
Preference number: 6 (lower is better)
Translates to: RLWASAVAKRRF*MASWRSGAPDP
Trigger: AGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GGACTCCTCAGTAGCAGGTCCAGAACTTGGGTCTGTTaGCGGCTCCCACCGCAAACTGTGAAGGCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: GLLSSRSRTWVC*RLPPQTVKAVQ
Trigger: CTGCACAGCCTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GACCCTCTGGGACTCCTCAGTAGCAGGTCCAGAACTTaGGTCTGTTGGCGGCTCCCACCGCAAACTGTGAAG +
Preference number: 6 (lower is better)
Translates to: DPLGLLSSRSRT*VCWRLPPQTVK
Trigger: CTTCACAGTTTGCGGTGGGAGCCGCCAACAGACCCAAGTTCTGGACCTGCTACTGAGGAGTCCCAGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GAGGTGTCTGCTGCCCGGAGGCACTCAAGCGAGATTTaGGGCATCACTTTCCCCAGAGGTTCCCAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: EVSAARRHSSEI*GITFPRGSQAL
Trigger: AAGGGCTTGGGAACCTCTGGGGAAAGTGATGCCCCAAATCTCGCTTGAGTGCCTCCGGGCAGCAGACACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS CCA 72 bp CTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTTaGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LLDGVLLVVALS*VVRIFCHSSWE
Trigger: CTCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS CAA 72 bp GTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATaGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTC +
Preference number: 6 (lower is better)
Translates to: VLLPRAFCWVQR*GPKHPGAGLCL
Trigger: GAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp CCTGCTGGATGGAGTCCTCCTGGTGGTGGCCTTGAGTaGGGTGGTCAGGATCTTCTGTCACAGCAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: PAGWSPPGGGLE*GGQDLLSQQLG
Trigger: TCCCAGCTGCTGTGACAGAAGATCCTGACCACCCAACTCAAGGCCACCACCAGGAGGACTCCATCCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS CAA 90 bp GGTTTGCAGGTGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATaGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: GLQVLLPRAFCWVQR*GPKHPGAGLCLSLA
Trigger: AGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCACCTGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp CCTGTACATCTCCAGTGGCTGCAGGTTCCCTCATGGTTGTCTGTGTaGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: PVHLQWLQVPSWLSV*PPPGLSAHPVAWSQ
Trigger: TTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp AGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTGCATTGCTTaGAATCTCCTCCCGACAGGCAGCCTTGACTTCGTGGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: RSGLKEPASRPHCIA*NLLPTGSLDFVDGA
Trigger: GGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp GCCTTGAGTAACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTaGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCCCTGTGGATG +
Preference number: 6 (lower is better)
Translates to: ALSNPSGRSGCLQNI*DRHGGGYRVRALWM
Trigger: CATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp TCTAGCCGCCAGTTCTCAAAGATCCAGCGCATACACTaGACATCGCCCTCAGTGGGCTCCTCCGAACCGAGG +
Preference number: 6 (lower is better)
Translates to: SSRQFSKIQRIH*TSPSVGSSEPR
Trigger: CCTCGGTTCGGAGGAGCCCACTGAGGGCGATGTTCAGTGTATGCGCTGGATCTTTGAGAACTGGCGGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp ACATCACCCCCTGATGGCCGGAGTCCCTCCGGCTCCTaGTCTGAGCTGTTGGTAAAGGAGCCTTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: TSPPDGRSPSGS*SELLVKEPSSN
Trigger: GTTTGAGGAAGGCTCCTTTACCAACAGCTCAGATCAGGAGCCGGAGGGACTCCGGCCATCAGGGGGTGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp CTGCATTGCTTTGAATCTCCTCCCGACAGGCAGCCTTaGCTTCGTGGATGGTGCCCTCGGCATCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: LHCFESPPDRQP*LRGWCPRHPGW
Trigger: CCATCCAGGATGCCGAGGGCACCATCCACGAAGTCAAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp ATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTTaGTTGTGGTCTCCGGGACCTCCTTCTTGCCCGCCT +
Preference number: 6 (lower is better)
Translates to: IYAQSLWGWTPG*LWSPGPPSCPP
Trigger: AGGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GGCATCCAAAGGCTGCGTCTCAAAGATCCAACGAGTTaGACTGACATCCGGCAGGGCTCCCTCCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: GIQRLRLKDPTS*TDIRQGSLLKG
Trigger: TCCCTTGAGGAGGGAGCCCTGCCGGATGTCAGTGCAACTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TGCAGGTCTCCTTTGTCTATGCAGCTGGCCAGCAGCTaGACACTGCTTCTTTCAGGGGCCCTGCTGGTAAGC +
Preference number: 6 (lower is better)
Translates to: CRSPLSMQLASS*TLLLSGALLVS
Trigger: GCTTACCAGCAGGGCCCCTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp CAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTTaGCAAACGCAGATTCTGCATGGCTTCCTGGAGATC +
Preference number: 6 (lower is better)
Translates to: QNLLVQALGLSG*QTQILHGFLEI
Trigger: GATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TCAGCGCATCCAGTGGCTTGGTCTCAAACATCTGTCTaGCAGCTTGGACATCACCCCCTGATGGCCGGAGTC +
Preference number: 6 (lower is better)
Translates to: SAHPVAWSQTSV*QLGHHPLMAGV
Trigger: GACTCCGGCCATCAGGGGGTGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GCAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTCCTaGCCTCTCAGCGCATCCAGTGGCTTGGTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: AGSLMVVCVASS*PLSASSGLVSN
Trigger: GTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TTCCCTGTACATCTCCAGTGGCTGCAGGTTCCCTCATaGTTGTCTGTGTTGCCTCCTCCTGGCCTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: FPVHLQWLQVPS*LSVLPPPGLSA
Trigger: CGCTGAGAGGCCAGGAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CTGAACATCTGGGCCAGGAGGGATGAGATCCGGAGATaGCTGGAAGTCCTTCTCGTCCACCTCGATCTCACG +
Preference number: 6 (lower is better)
Translates to: LNIWARRDEIRR*LEVLLVHLDLT
Trigger: CGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TGCTGCTCCCCAGAGCCTTCTGCTGGGTTCAGAGATTaGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCA +
Preference number: 6 (lower is better)
Translates to: CCSPEPSAGFRD*GPNIQVQDCVS
Trigger: TGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCTGAACCCAGCAGAAGGCTCTGGGGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CTGCCTCTCTGGTGTCCCATGGCCTGCAGAGCCTTTTaGCTGTTCTTCCTGGAGGTTGTCCCCTCTGATGCT +
Preference number: 6 (lower is better)
Translates to: LPLWCPMACRAF*LFFLEVVPSDA
Trigger: AGCATCAGAGGGGACAACCTCCAGGAAGAACAGCCAAAAGGCTCTGCAGGCCATGGGACACCAGAGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCAATaGTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTT +
Preference number: 6 (lower is better)
Translates to: GDLEPQTLEGKQ*FLLVFLRLPSL
Trigger: AAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAACCATTGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TCAGCGGTTGCCAAACGCAGATTCTGCATGGCTTCCTaGAGATCTGGAGCCCCAGACCCTAGAGGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SAVAKRRFCMAS*RSGAPDPRGEA
Trigger: TGCTTCCCCTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TTTGGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATaGCTTCCTGGAGATCTGGAGCCCCAGACCCTAGAG +
Preference number: 6 (lower is better)
Translates to: FGPQRLPNADSA*LPGDLEPQTLE
Trigger: CTCTAGGGTCTGGGGCTCCAGATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TGTGGATGCCTGCTCAGAACCTGCTGGTGCAGGCTTTaGGCCTCAGCGGTTGCCAAACGCAGATTCTGCATG +
Preference number: 6 (lower is better)
Translates to: CGCLLRTCWCRL*ASAVAKRRFCM
Trigger: CATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGAGCAGGCATCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CAGGAGTGGATGCTTGCAGAACATCTTGGACAGGCATaGAGGTGGCTACAGGGTCAGAGCCCTGTGGATGCC +
Preference number: 6 (lower is better)
Translates to: QEWMLAEHLGQA*RWLQGQSPVDA
Trigger: GGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp AATTTATGCACAGAGCCTGTGGGGATGGACCCCAGGTaGATTGTGGTCTCCGGGACCTCCTTCTTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: NLCTEPVGMDPR*IVVSGTSFLPA
Trigger: GGCGGGCAAGAAGGAGGTCCCGGAGACCACAATCAACCTGGGGTCCATCCCCACAGGCTCTGTGCATAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp AACCCCAGTGGCAGGAGTGGATGCTTGCAGAACATCTaGGACAGGCATGGAGGTGGCTACAGGGTCAGAGCC +
Preference number: 6 (lower is better)
Translates to: NPSGRSGCLQNI*DRHGGGYRVRA
Trigger: GGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp AGAGATTGGGGCCCAAACATCCAGGTGCAGGACTGTGTCTCAGCCTaGCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: RDWGPNIQVQDCVSA*LTGSVTSDSRFSAN
Trigger: GTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTCCTGCACCTGGATGTTTGGGCCCCAATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp CCCTCGGCATCCTGGATGGCGCATAGAGGTTCCGTCTaGAACAGCTTCACCGTCTTCTTCACATCGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PSASWMAHRGSV*NSFTVFFTSPF
Trigger: GAAGGGCGATGTGAAGAAGACGGTGAAGCTGTTTCAGACGGAACCTCTATGCGCCATCCAGGATGCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp GATGTCGCTGATGCTGAACATCTGGGCCAGGAGGGATaGGATCCGGAGATGGCTGGAAGTCCTTCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: DVADAEHLGQEG*DPEMAGSPSRP
Trigger: TGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp TGCAGGACTGTGTCTCAGCCTTGCTCACGGGGTCTGTaGCCTCAGATTCTCGCTTCTCTGCCAACTCGCTCA +
Preference number: 6 (lower is better)
Translates to: CRTVSQPCSRGL*PQILASLPTRS
Trigger: TGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGCAAGGCTGAGACACAGTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp AGGCTGGCACCTGCTGGTTTAGATGTCAGGGTGTGGTaGGTTAGAGGGGCAGTCTTCAGGGAGGTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: RLAPAGLDVRVW*VRGAVFREVSA
Trigger: AGCAGACACCTCCCTGAAGACTGCCCCTCTAACTCACCACACCCTGACATCTAAACCAGCAGGTGCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS GCA 72 bp AGGTCGGGTCTCAAAGAGCCAGCGAGCAGACCTCACTaGATTGCTTTGAATCTCCTCCCGACAGGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: RSGLKEPASRPH*IALNLLPTGSL
Trigger: AAGGCTGCCTGTCGGGAGGAGATTCAAAGCAATGCAGTGAGGTCTGCTCGCTGGCTCTTTGAGACCCGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GGAGGTGGGCAGGGTGTGGATCCTGAGATTCTCAGCTaGCCCATCTCCATGGTGGAGTCTAATGGGGTAACA +
Preference number: 6 (lower is better)
Translates to: GGGQGVDPEILS*PISMVESNGVT
Trigger: TGTTACCCCATTAGACTCCACCATGGAGATGGGGCAGCTGAGAATCTCAGGATCCACACCCTGCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GATGCTGCCTTGAGTAACCCCAGTGGCAGGAGTGGATaGTTGCAGAACATCTTGGACAGGCATGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: DAALSNPSGRSG*LQNILDRHGGG
Trigger: GCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCACTCCTGCCACTGGGGTTACTCAAGGCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GACTGCTTTGTTGTCCCCACTGACCTTTCTGGGGAATaGTGGGATCCTGGCTTCACTTCCAGCCACAGGCCT +
Preference number: 6 (lower is better)
Translates to: DCFVVPTDLSGE*WDPGFTSSHRP
Trigger: AGGCCTGTGGCTGGAAGTGAAGCCAGGATCCCAGCATTCCCCAGAAAGGTCAGTGGGGACAACAAAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238557.3
CDS CCA 72 bp ACATCTGGGCCAGGAGGGATGAGATCCGGAGATGGCTaGAAGTCCTTCTCGTCCACCTCGATCTCACGAATG +
Preference number: 6 (lower is better)
Translates to: TSGPGGMRSGDG*KSFSSTSISRM
Trigger: CATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TGGATGCTTGCAGAACATCTTGGACAGGCATGGAGGTaGCTACAGGGTCAGAGCCCTGTGGATGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: WMLAEHLGQAWR*LQGQSPVDACS
Trigger: TGAGCAGGCATCCACAGGGCTCTGACCCTGTAGCCACCTCCATGCCTGTCCAAGATGTTCTGCAAGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp GGGATGAGGGAGGGACAGGTCCTCTTCTGTCCTCATTaGGATGGTTGGTGTAGGAGCTACCTGCATCTGGGC +
Preference number: 6 (lower is better)
Translates to: GMREGQVLFCPH*DGWCRSYLHLG
Trigger: GCCCAGATGCAGGTAGCTCCTACACCAACCATCCAAATGAGGACAGAAGAGGACCTGTCCCTCCCTCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp GTTGCCTCCTCCTGGCCTCTCAGCGCATCCAGTGGCTaGGTCTCAAACATCTGTCTGGCAGCTTGGACATCA +
Preference number: 6 (lower is better)
Translates to: VASSWPLSASSG*VSNICLAAWTS
Trigger: TGATGTCCAAGCTGCCAGACAGATGTTTGAGACCAAGCCACTGGATGCGCTGAGAGGCCAGGAGGAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp TCAGAACCTGCTGGTGCAGGCTTTGGGCCTCAGCGGTaGCCAAACGCAGATTCTGCATGGCTTCCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: SEPAGAGFGPQR*PNADSAWLPGD
Trigger: ATCTCCAGGAAGCCATGCAGAATCTGCGTTTGGCAACCGCTGAGGCCCAAAGCCTGCACCAGCAGGTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp CCTGGACCCTTCCCCTCTTCCTCCTCTGGTTTCTGTTaGTCTTGTTGGTGGATCATCTCCAATGGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: PGPFPSSSSGFC*SCWWIISNGCV
Trigger: GACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCAGAGGAGGAAGAGGGGAAGGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GCTCACGGGGTCTGTGACCTCAGATTCTCGCTTCTCTaGCAACTCGCTCATAGGGTAGGTCTCAAACAGCCA +
Preference number: 6 (lower is better)
Translates to: AHGVCDLRFSLL*QLAHRVGLKQP
Trigger: TGGCTGTTTGAGACCTACCCTATGAGCGAGTTGGCAGAGAAGCGAGAATCTGAGGTCACAGACCCCGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CTGTCCTGCATAGCATATACCGGGGCGTCAGAACCCTaGGACTGCTCGGCAGAATCAGTGTTTTGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSCIAYTGASEP*DCSAESVFCPL
Trigger: CAGAGGACAAAACACTGATTCTGCCGAGCAGTCCCAGGGTTCTGACGCCCCGGTATATGCTATGCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111635.4
ENSMUST00000213113.2
ENSMUST00000238557.3
CDS CAA 90 bp AATAGCCAGAGTGTAGAGCGGACATCGCCAGGAATCACCTCCTCCTaGGGTGGCACCTCTGCCTCTGTTTCTCTTTCACCCTTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: NSQSVERTSPGITSS*GGTSASVSLSPFRV
Trigger: CACTCTGAAGGGTGAAAGAGAAACAGAGGCAGAGGTGCCACCCAAGGAGGAGGTGATTCCTGGCGATGTCCGCTCTACACTCTGGCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp AGCTTCACCGTCTTCTTCACATCGCCCTTCAGCTCCTaGATCTCTGAGCGCAGCTCTAAAGGACTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SFTVFFTSPFSS*ISERSSKGLCS
Trigger: GGAGCAGAGTCCTTTAGAGCTGCGCTCAGAGATTCAGGAGCTGAAGGGCGATGTGAAGAAGACGGTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TTCTGTTGCTCTTGTTGGTGGATCATCTCCAATGGCTaGGTCTCAAAGAGCCACCGAGTGGTGCCGACATCC +
Preference number: 6 (lower is better)
Translates to: FCCSCWWIISNG*VSKSHRVVPTS
Trigger: GGATGTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GCAAACTGTGAAGGCTGTGCAGGTCTCCTTTGTCTATaGAGCTGGCCAGCAGCTGCACACTGCTTCTTTCAG +
Preference number: 6 (lower is better)
Translates to: ANCEGCAGLLCL*SWPAAAHCFFQ
Trigger: CTGAAAGAAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAAGGAGACCTGCACAGCCTTCACAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp GCTGGAAGTCCTTCTCGTCCACCTCGATCTCACGAATaGCATCCAAAGGCTGCGTCTCAAAGATCCAACGAG +
Preference number: 6 (lower is better)
Translates to: AGSPSRPPRSHE*HPKAASQRSNE
Trigger: CTCGTTGGATCTTTGAGACGCAGCCTTTGGATGCCATTCGTGAGATCGAGGTGGACGAGAAGGACTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp TGGTTTCTGTTGCTCTTGTTGGTGGATCATCTCCAATaGCTGCGTCTCAAAGAGCCACCGAGTGGTGCCGAC +
Preference number: 6 (lower is better)
Translates to: WFLLLLLVDHLQ*LRLKEPPSGAD
Trigger: GTCGGCACCACTCGGTGGCTCTTTGAGACGCAGCCATTGGAGATGATCCACCAACAAGAGCAACAGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp GTGGATGTGTTTGTAGAGACGCCGGAGCTCACTGGCTaGCCGCTGCTGCTGGAACTTGGAGAAGGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: VDVFVETPELTG*PLLLELGEGFF
Trigger: AAAGAAACCTTCTCCAAGTTCCAGCAGCAGCGGCAAGCCAGTGAGCTCCGGCGTCTCTACAAACACATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp CTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCCATTaGGAAGGACCACTTTTCCAGCTGCCCGAGATGGAG +
Preference number: 6 (lower is better)
Translates to: LPAMELGLQVSH*EGPLFQLPEME
Trigger: CTCCATCTCGGGCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp CCACCCGTTGCAGGTGACCCACTTGGACCTGGTCTCTaGAAGCATCCAGGGGTTTTGTTTCAAATAGCCAGA +
Preference number: 6 (lower is better)
Translates to: PPVAGDPLGPGL*KHPGVLFQIAR
Trigger: TCTGGCTATTTGAAACAAAACCCCTGGATGCTTTCAGAGACCAGGTCCAAGTGGGTCACCTGCAACGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS TCA 72 bp TTCCTGAGGCTGCCTTCCCTTTCTGCCCAGCATGGCTaGTATCCGTTTTCTTCCTTGCTTCCTGCAATGGAG +
Preference number: 6 (lower is better)
Translates to: FLRLPSLSAQHG*YPFSSLLPAME
Trigger: CTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp AAAGAGCTTTCTGGTTCCCTGTACATCTCCAGTGGCTaGAGGTTCCCTCATGGTTGTCTGTGTTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: KELSGSLYISSG*RFPHGCLCCLL
Trigger: GAGGAGGCAACACAGACAACCATGAGGGAACCTGCAGCCACTGGAGATGTACAGGGAACCAGAAAGCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp GTTCCTTCTGGTCTTCCTGAGGCTGCCTTCCCTTTCTaGCCAGCATGGCTGATATCCGTTTTCTTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: VPSGLPEAAFPF*PAWLISVFFLA
Trigger: AGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAAGGGAAGGCAGCCTCAGGAAGACCAGAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp ACAGGTTTCAAACAGATGTCGCTGATGCTGAACATCTaGGCCAGGAGGGATGAGATCCGGAGATGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: TGFKQMSLMLNI*ARRDEIRRWLE
Trigger: TTCCAGCCATCTCCGGATCTCATCCCTCCTGGCCCAGATGTTCAGCATCAGCGACATCTGTTTGAAACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp CCACCCGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTCTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: PPGCSTLQAFSHWIG*RLAEIQSQRHVCLS
Trigger: AGACAGACAGACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp TGCATAGCATATACCGGGGCGTCAGAACCCTGGGACTaGTCGGCAGAATCAGTGTTTTGTCCTCTGTTTATG +
Preference number: 6 (lower is better)
Translates to: CIAYTGASEPWD*SAESVFCPLFM
Trigger: CATAAACAGAGGACAAAACACTGATTCTGCCGAGCAGTCCCAGGGTTCTGACGCCCCGGTATATGCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111635.4
ENSMUST00000213113.2
ENSMUST00000238557.3
CDS GCA 72 bp TTTCTGCCCAGCATGGCTGATATCCGTTTTCTTCCTTaGTTCCTGCAATGGAGCTTGGGCTACAGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: FLPSMADIRFLP*FLQWSLGYRFP
Trigger: GGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGGGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp CGGCTGCAGTACCTTACAGGCTTTCTCCCACTGGATTaGTTTGAGGCTGGCAGAGATTCAGTCTCAAAGACA +
Preference number: 6 (lower is better)
Translates to: RLQYLTGFLPLD*FEAGRDSVSKT
Trigger: TGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 90 bp AGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTaGGGCTACAGGTTTCCCATTTGGAAGGACCACTTTTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SMADIRFLPCFLQWS*GYRFPIWKDHFSSC
Trigger: GCAGCTGGAAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS GCA 72 bp CCAGCATGGCTGATATCCGTTTTCTTCCTTGCTTCCTaGAATGGAGCTTGGGCTACAGGTTTCCCATTTGGA +
Preference number: 6 (lower is better)
Translates to: PAWLISVFFLAS*NGAWATGFPFG
Trigger: TCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATATCAGCCATGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CAA 72 bp TGCAGTACCTTACAGGCTTTCTCCCACTGGATTGGTTaGAGGCTGGCAGAGATTCAGTCTCAAAGACATGTC +
Preference number: 6 (lower is better)
Translates to: CSTLQAFSHWIG*RLAEIQSQRHV
Trigger: GACATGTCTTTGAGACTGAATCTCTGCCAGCCTCAAACCAATCCAGTGGGAGAAAGCCTGTAAGGTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3
CDS CCA 72 bp ATATCCGTTTTCTTCCTTGCTTCCTGCAATGGAGCTTaGGCTACAGGTTTCCCATTTGGAAGGACCACTTTT +
Preference number: 6 (lower is better)
Translates to: ISVFFLASCNGA*ATGFPFGRTTF
Trigger: AAAAGTGGTCCTTCCAAATGGGAAACCTGTAGCCCAAGCTCCATTGCAGGAAGCAAGGAAGAAAACGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111635.4
ENSMUST00000238557.3