Pregenerated sensors for XIAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025860Ensembl transcript IDs: ENSMUST00000026978.7, ENSMUST00000055483.10, ENSMUST00000115094.8, ENSMUST00000115095.9, ENSMUST00000224454.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAAAAGAGGGCACCAGAGCTACATGTGTCTTTGTCCATGTGGGTaGTGGGAACTGAACCTAAGTCCTCTGAAAAAGCAGCAAGTACTC | + |
|
Preference number: 1 (lower is better) Translates to: AKRGHQSYMCLCPCG*WELNLSPLKKQQVL Trigger: GAGTACTTGCTGCTTTTTCAGAGGACTTAGGTTCAGTTCCCAGCACCCACATGGACAAAGACACATGTAGCTCTGGTGCCCTCTTTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 90 bp | GAAGGCCAAAAGAGGGCACCAGAGCTACATGTGTCTTTGTCCATGTaGGTGCTGGGAACTGAACCTAAGTCCTCTGAAAAAGCAGCAAGT | + |
|
Preference number: 1 (lower is better) Translates to: EGQKRAPELHVSLSM*VLGTEPKSSEKAAS Trigger: ACTTGCTGCTTTTTCAGAGGACTTAGGTTCAGTTCCCAGCACCCACATGGACAAAGACACATGTAGCTCTGGTGCCCTCTTTTGGCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACCTCTCTCAGGGGTGGTaGTTCAGAGCCGGTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYLSQGW*FRAGYS Trigger: AGAATAACCGGCTCTGAATCACCACCCCTGAGAGAG...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGCTCTCTCAGGGGTGGTaGTTCAGAGCCGGTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: STHLTSTPNYRKRQKSRRLSQGW*FRAGYS Trigger: AGAATAACCGGCTCTGAATCACCACCCCTGAGAGAG...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGCACTAACCATGACCTaGCTGCTTTTATGCCCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYALTMT*LLLCPF Trigger: GAACGGGCATAAAAGCAGCCAGGTCATGGTTAGTGC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACTGTCCATGTGGGTGCTaGGAACTGAACCTAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYCPCGC*ELNLSP Trigger: AGGACTTAGGTTCAGTTCCCAGCACCCACATGGACA...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAACCTGGCTGCTTTTATaGCCGTTCTGGGGATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKTWLLL*PFWGSE Trigger: TTCAGATCCCCAGAACGGGCATAAAAGCAGCCAGGT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACACTGACCATGAGCTTTaGGGCATTCTCCTAGCTACT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYTDHEL*GILLAT Trigger: AGTAGCTAGGAGAATGCCCCAAAGCTCATGGTCAGT...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGGCCACATCAGCTCCATaGATTCAATTTCGCAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: STHLTSTPNYRKRQKSRRATSAP*IQFRNS Trigger: TGAGTTGCGAAATTGAATTCATGGAGCTGATGTGGC...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACCTTTATCCAGTATCTaGGGACTCAGAAGTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKPLSSI*GLRSPG Trigger: TCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAGCCACATCAGCTCCATaGATTCAATTTCGCAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKATSAP*IQFRNS Trigger: TGAGTTGCGAAATTGAATTCATGGAGCTGATGTGGC...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACTCTACCCACTTTCTTaGTTCTCTCATAGCAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKLYPLS*FSHSSD Trigger: GTCACTGCTATGAGAGAAGCAAGAAAGTGGGTAGAG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGGCATTGGTCTCCATTTaGAAACAGCAGATGCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: STHLTSTPNYRKRQKSRRALVSI*KQQMLM Trigger: CATTAGCATCTGCTGTTTCCAAATGGAGACCAATGC...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGCATTGGTCTCCATTTaGAAACAGCAGATGCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYALVSI*KQQMLM Trigger: CATTAGCATCTGCTGTTTCCAAATGGAGACCAATGC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACCAATTTCGCAACTCATaGAGACAAGAAAAGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYQFRNS*RQEKRS Trigger: AGACCTCTTTTCTTGTCTTCATGAGTTGCGAAATTG...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTAACAAACTACCTATATaGCTTGTACCTGAAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFNKLPI*LVPEVP Trigger: AGGCACTTCAGGTACAAGTCATATAGGTAGTTTGTT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACAAGTCTCCAATAATTTaGTTAGAGTTGGAGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYKSPII*LELECC Trigger: ACAGCACTCCAACTCTAATCAAATTATTGGAGACTT...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGATGTGACTAAAATGTaGAGTATTTCTCTACCCACT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYDVTKM*SISLPT Trigger: AGTGGGTAGAGAAATACTTCACATTTTAGTCACATC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAATCCATCACATCTCCATaGTTATACAGAACACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKSITSP*LYRTLH Trigger: ATGGAGTGTTCTGTATAAGCATGGAGATGTGATGGA...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTAACAAACTACCTATATaGCTTGTACCTGAAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTNKLPI*LVPEVP Trigger: AGGCACTTCAGGTACAAGTCATATAGGTAGTTTGTT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTAATGAACTGAGGCTCTaGGAACAAGAAAAGTGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFNELRL*EQEKCY Trigger: ATAACACTTTTCTTGTTCTCAGAGCCTCAGTTCATT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTCAATTTCGCAACTCATaGAGACAAGAAAAGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTQFRNS*RQEKRS Trigger: AGACCTCTTTTCTTGTCTTCATGAGTTGCGAAATTG...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAAAGTCTCCAATAATTTaGTTAGAGTTGGAGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKKSPII*LELECC Trigger: ACAGCACTCCAACTCTAATCAAATTATTGGAGACTT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAGATGTGACTAAAATGTaGAGTATTTCTCTACCCACT | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKDVTKM*SISLPT Trigger: AGTGGGTAGAGAAATACTTCACATTTTAGTCACATC...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAATGTCAAGCCTATTTTTaGCTAGTTCTTTCCTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKCQAYF*LVLSFT Trigger: AGTGAAGGAAAGAACTAGTCAAAAATAGGCTTGACA...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTTCCATCACATCTCCATaGTTATACAGAACACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTSITSP*LYRTLH Trigger: ATGGAGTGTTCTGTATAAGCATGGAGATGTGATGGA...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGAATCGAGTAAAACACTaGCTAAATGATACAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: STHLTSTPNYRKRQKSRRNRVKH*LNDTAD Trigger: ATCAGCTGTATCATTTAGCCAGTGTTTTACTCGATT...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACAATCGAGTAAAACACTaGCTAAATGATACAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYNRVKH*LNDTAD Trigger: ATCAGCTGTATCATTTAGCCAGTGTTTTACTCGATT...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTAAGTCTCCAATAATTTaGTTAGAGTTGGAGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTKSPII*LELECC Trigger: ACAGCACTCCAACTCTAATCAAATTATTGGAGACTT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCTCTCTCAGGGGTGGTaGTTCAGAGCCGGTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: WLLQNSRMNFIQQKTISTLSQGW*FRAGYS Trigger: AGAATAACCGGCTCTGAATCACCACCCCTGAGAGAG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTAATCGAGTAAAACACTaGCTAAATGATACAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTNRVKH*LNDTAD Trigger: ATCAGCTGTATCATTTAGCCAGTGTTTTACTCGATT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTCTTATGCAAAAGGCATaGAACATGCAGGTGATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: AAKVAVALSIQRAQNINLLMQKA*NMQVMN Trigger: ATTCATCACCTGCATGTTTCATGCCTTTTGCATAAG...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGGCCACATCAGCTCCATaGATTCAATTTCGCAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: WLLQNSRMNFIQQKTISTATSAP*IQFRNS Trigger: TGAGTTGCGAAATTGAATTCATGGAGCTGATGTGGC...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTAAGTCTCCAATAATTTaGTTAGAGTTGGAGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AAKVAVALSIQRAQNINLKSPII*LELECC Trigger: ACAGCACTCCAACTCTAATCAAATTATTGGAGACTT...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATCTTATGCAAAAGGCATaGAACATGCAGGTGATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDLMQKA*NMQVMN Trigger: ATTCATCACCTGCATGTTTCATGCCTTTTGCATAAG...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATTCCATCACATCTCCATaGTTATACAGAACACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDSITSP*LYRTLH Trigger: ATGGAGTGTTCTGTATAAGCATGGAGATGTGATGGA...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCAATTTCGCAACTCATaGAGACAAGAAAAGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: WLLQNSRMNFIQQKTISTQFRNS*RQEKRS Trigger: AGACCTCTTTTCTTGTCTTCATGAGTTGCGAAATTG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGTCCATCACATCTCCATaGTTATACAGAACACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: WLLQNSRMNFIQQKTISTSITSP*LYRTLH Trigger: ATGGAGTGTTCTGTATAAGCATGGAGATGTGATGGA...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGATAACTTGTGGATGTaGGTGGGCTCTCACCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYDNLWM*VGSHLP Trigger: GGGAAGGTGAGAGCCCACCAACATCCACAAGTTATC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGAGGCAGCAGATAACTaGTGGATGTTGGTGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYEAADN*WMLVGS Trigger: AGAGCCCACCAACATCCACAAGTTATCTGCTGCCTC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR GCA 72 bp | TCTACCCCTGCCTCCCAAATGCTGGGATTAAAGGAGTaGACTAACCATGACCTGGCTGCTTTTATGCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: STPASQMLGLKE*TNHDLAAFMPV Trigger: AACGGGCATAAAAGCAGCCAGGTCATGGTTAGTGCACTCCTTTAATCCCAGCATTTGGGAGGCAGGGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAATGCATGCAGCTAAGGTaGCAGTGGCACTTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKCMQLR*QWHFPF Trigger: GAATGGAAAGTGCCACTGCAACCTTAGCTGCATGCA...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | TCTGGGTGTAAGTGGTTACCTGCCATGTTACATGTGTaGAGGCAGCAGATAACTTGTGGATGTTGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGCKWLPAMLHV*RQQITCGCWWA Trigger: AGCCCACCAACATCCACAAGTTATCTGCTGCCTCCACACATGTAACATGGCAGGTAACCACTTACACCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTTGCATGCAGCTAAGGTaGCAGTGGCACTTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTCMQLR*QWHFPF Trigger: GAATGGAAAGTGCCACTGCAACCTTAGCTGCATGCA...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | TGCCATGTTACATGTGTGGAGGCAGCAGATAACTTGTaGATGTTGGTGGGCTCTCACCTTCCCACTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CHVTCVEAADNL*MLVGSHLPTLF Trigger: AAACAAAGTGGGAAGGTGAGAGCCCACCAACATCCACAAGTTATCTGCTGCCTCCACACATGTAACATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | GGTCTTCTCTCTTTTGTGTATGTGTCTGGGTGTAAGTaGTTACCTGCCATGTTACATGTGTGGAGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLLSFVYVSGCK*LPAMLHVWRQQ Trigger: CTGCTGCCTCCACACATGTAACATGGCAGGTAACCACTTACACCCAGACACATACACAAAAGAGAGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | CACCAGAGCTACATGTGTCTTTGTCCATGTGGGTGCTaGGAACTGAACCTAAGTCCTCTGAAAAAGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HQSYMCLCPCGC*ELNLSPLKKQQ Trigger: TTGCTGCTTTTTCAGAGGACTTAGGTTCAGTTCCCAGCACCCACATGGACAAAGACACATGTAGCTCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | AAGAGGGCACCAGAGCTACATGTGTCTTTGTCCATGTaGGTGCTGGGAACTGAACCTAAGTCCTCTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KRAPELHVSLSM*VLGTEPKSSEK Trigger: TTTTTCAGAGGACTTAGGTTCAGTTCCCAGCACCCACATGGACAAAGACACATGTAGCTCTGGTGCCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACTTGGTCTTCTCTCTTTaGTGTATGTGTCTGGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYLVFSL*CMCLGV Trigger: TACACCCAGACACATACACAAAAGAGAGAAGACCAA...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAAGCATTGGTCTCCATTaGGAAACAGCAGATGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKSIGLH*ETADAN Trigger: ATTAGCATCTGCTGTTTCCAAATGGAGACCAATGCT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAAACTACCTATATGACTaGTACCTGAAGTGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKNYLYD*YLKCLG Trigger: TCCAAGGCACTTCAGGTACAAGTCATATAGGTAGTT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACGGATCTGAATTCAGGTaGTCAAGCCTATTTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYGSEFR*SSLFLT Trigger: AGTCAAAAATAGGCTTGACAACCTGAATTCAGATCC...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACCTTGTGTTAACACTCTaGGTCTTCTCTCTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYLVLTL*VFSLLC Trigger: ACACAAAAGAGAGAAGACCAAGAGTGTTAACACAAG...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | GGCTACTCCATCTCTCCTCTTCCTTTATCCAGTATCTaGGGACTCAGAAGTCCAGGAAGACTTAGGTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GYSISPLPLSSI*GLRSPGRLRSN Trigger: ATTAGACCTAAGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATGGAGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACTACAGAACACTCCATTaGTTAAGCTTATGCAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYYRTLH*LSLCKR Trigger: CCTTTTGCATAAGCTTAACAAATGGAGTGTTCTGTA...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGTTAACTATATCTGTGTaGCCTTTCCATGTCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: STHLTSTPNYRKRQKSRRLTISV*PFHVST Trigger: TGTACTGACATGGAAAGGCAACACAGATATAGTTAA...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACACACTCACACACATCTaGATCAACACAGTAAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYTLTHI*INTVNN Trigger: GTTATTTACTGTGTTGATCAAGATGTGTGTGAGTGT...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACTTGTCAAGCCTATTTTaGACTAGTTCTTTCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYLSSLF*TSSFLH Trigger: GTGAAGGAAAGAACTAGTCAAAAATAGGCTTGACAA...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTTACAGAACACTCCATTaGTTAAGCTTATGCAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFYRTLH*LSLCKR Trigger: CCTTTTGCATAAGCTTAACAAATGGAGTGTTCTGTA...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAATTAACTATATCTGTGTaGCCTTTCCATGTCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKLTISV*PFHVST Trigger: TGTACTGACATGGAAAGGCAACACAGATATAGTTAA...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAACACTCACACACATCTaGATCAACACAGTAAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKTLTHI*INTVNN Trigger: GTTATTTACTGTGTTGATCAAGATGTGTGTGAGTGT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | CCTGTTTCATGTAGGCATTCTGGGATTACAGGTGCTTaGGCTAGTGCGCTCAGCTTTTTGTTTGTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PVSCRHSGITGA*ASALSFLFVLF Trigger: AAACAAAACAAACAAAAAGCTGAGCGCACTAGCCCAAGCACCTGTAATCCCAGAATGCCTACATGAAACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR GCA 72 bp | CTATATAGCTTCGGGCCAATCACCTTTCCTTTAAGTTaGCTCAACAATAAAATGAAGGTGGTGGTGGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYSFGPITFPLS*LNNKMKVVVVV Trigger: CACTACCACCACCACCTTCATTTTATTGTTGAGGCAACTTAAAGGAAAGGTGATTGGCCCGAAGCTATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTAACTACCTATATGACTaGTACCTGAAGTGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AAKVAVALSIQRAQNINLNYLYD*YLKCLG Trigger: TCCAAGGCACTTCAGGTACAAGTCATATAGGTAGTT...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTACACTCACACACATCTaGATCAACACAGTAAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: AAKVAVALSIQRAQNINLTLTHI*INTVNN Trigger: GTTATTTACTGTGTTGATCAAGATGTGTGTGAGTGT...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CCA 72 bp | AGCTTTAGTCTAAGATCTTCCATCAAGACAAAGCCATaGAGGATTCTAAGTTGTAGGATGAGAGTTAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SFSLRSSIKTKP*RILSCRMRVNT Trigger: AGTGTTAACTCTCATCCTACAACTTAGAATCCTCCATGGCTTTGTCTTGATGGAAGATCTTAGACTAAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGAGCATTGGTCTCCATTaGGAAACAGCAGATGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: WLLQNSRMNFIQQKTISTSIGLH*ETADAN Trigger: ATTAGCATCTGCTGTTTCCAAATGGAGACCAATGCT...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGAGCCAATTAAAGTCATaGGGCAGATTCCATCACATC | + |
|
Preference number: 3 (lower is better) Translates to: WLLQNSRMNFIQQKTISTSQLKS*GRFHHI Trigger: GATGTGATGGAATCTGCCCAATGACTTTAATTGGCT...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR TCA 72 bp | CCTAGGCTAAGGACTAGATTAAACAAACTACCTATATaGCTTGTACCTGAAGTGCCTTGGAAACAATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PRLRTRLNKLPI*LVPEVPWKQFL Trigger: TAAAAATTGTTTCCAAGGCACTTCAGGTACAAGTCATATAGGTAGTTTGTTTAATCTAGTCCTTAGCCTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR GCA 72 bp | TTAACTATATCTGTGTTGCCTTTCCATGTCAGTACATaGTGGTTAGATGGTAGTCTACCATTCAATATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTISVLPFHVST*WLDGSLPFNIF Trigger: AAAGATATTGAATGGTAGACTACCATCTAACCAGCATGTACTGACATGGAAAGGCAACACAGATATAGTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACTTGCCGCATGACAACTaGAACATTGCACGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYLPHDN*NIARCL Trigger: GAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAA...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGTTGCCGCATGACAACTaGAACATTGCACGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STHLTSTPNYRKRQKSRRLPHDN*NIARCL Trigger: GAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAA...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGGTGTCTTCCAACAGCTaGGTCTCCATACTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: STHLTSTPNYRKRQKSRRVSSNS*VSILPS Trigger: AGATGGCAGTATGGAGACTCAGCTGTTGGAAGACAC...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CAA 72 bp | ACCTGCCATGTTACATGTGTGGAGGCAGCAGATAACTaGTGGATGTTGGTGGGCTCTCACCTTCCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCHVTCVEAADN*WMLVGSHLPTL Trigger: CAAAGTGGGAAGGTGAGAGCCCACCAACATCCACAAGTTATCTGCTGCCTCCACACATGTAACATGGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTTTGCCGCATGACAACTaGAACATTGCACGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFLPHDN*NIARCL Trigger: GAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAA...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTGTGTCTTCCAACAGCTaGGTCTCCATACTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFVSSNS*VSILPS Trigger: AGATGGCAGTATGGAGACTCAGCTGTTGGAAGACAC...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | ATGTATACACACATGCATGCACCCCTGAAGGCCAAAAGAGGGCACCAGAGCTACCGGCCAGTTCTGAAATaGCTTCAATCTGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MYTHMHAPLKAKRGHQSYRPVLK*LQSGFF Trigger: GAAGAAGCCAGATTGAAGTCATTTCAGAACTGGCCG...GTAGCTCTGGTGCCCTCTTTTGGCCTTCAGGGGTGCATGCATGTGTGTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTGTGTCTTCCAACAGCTaGGTCTCCATACTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTVSSNS*VSILPS Trigger: AGATGGCAGTATGGAGACTCAGCTGTTGGAAGACAC...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGCGGGTATATGGTGTCTaGAATATCTACAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STHLTSTPNYRKRQKSRRRVYGV*NIYNLS Trigger: GGACAGGTTGTAGATATTTCAGACACCATATACCCG...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACGGCCAGTTCTGAAATaGCTTCAATCTGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKRPVLK*LQSGFF Trigger: GAAGAAGCCAGATTGAAGTCATTTCAGAACTGGCCG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTCCGTGCTTCATATTCTaGCATGGCTGGATTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFPCFIF*HGWISW Trigger: CCAAGAAATCCAGCCATGGCAGAATATGAAGCACGG...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACCGTGCTTCATATTCTaGCATGGCTGGATTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKPCFIF*HGWISW Trigger: CCAAGAAATCCAGCCATGGCAGAATATGAAGCACGG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACGGGTATATGGTGTCTaGAATATCTACAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKRVYGV*NIYNLS Trigger: GGACAGGTTGTAGATATTTCAGACACCATATACCCG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAACTGCTCCTTGTTAACTaGGGATGTCCATGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKLLLVN*GCPCSK Trigger: TTTGGAACATGGACATCCTCAGTTAACAAGGAGCAG...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTCTGCTCCTTGTTAACTaGGGATGTCCATGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFLLLVN*GCPCSK Trigger: TTTGGAACATGGACATCCTCAGTTAACAAGGAGCAG...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTGCTGAGTCTCCATACTaGCATCTATCTATTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTAESPY*HLSIAA Trigger: TGCGGCAATAGATAGATGGCAGTATGGAGACTCAGC...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTCTGCTCCTTGTTAACTaGGGATGTCCATGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTLLLVN*GCPCSK Trigger: TTTGGAACATGGACATCCTCAGTTAACAAGGAGCAG...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTTCCGTATTATCTTTCTaGGCACTCACAAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFSVLSF*ALTRSA Trigger: TGCAGATCTTGTGAGTGCTCAGAAAGATAATACGGA...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTCTGCCATCTATCTATTaGCGCATGACAACTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFLPSIY*RMTTET Trigger: TGTTTCAGTTGTCATGCGGCAATAGATAGATGGCAG...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAGGGACATTTGTCAACTaGTTCTGCACACTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKGTFVN*FCTLFT Trigger: TGTAAACAGTGTGCAGAAGCAGTTGACAAATGTCCC...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTGGGACATTTGTCAACTaGTTCTGCACACTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFGTFVN*FCTLFT Trigger: TGTAAACAGTGTGCAGAAGCAGTTGACAAATGTCCC...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTTCCGTATTATCTTTCTaGGCACTCACAAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTSVLSF*ALTRSA Trigger: TGCAGATCTTGTGAGTGCTCAGAAAGATAATACGGA...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTGGGACATTTGTCAACTaGTTCTGCACACTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTGTFVN*FCTLFT Trigger: TGTAAACAGTGTGCAGAAGCAGTTGACAAATGTCCC...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTTTGTACTGGCCATTTTaGATACCAGGATTTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFLYWPF*IPGFVD Trigger: GTCTACAAATCCTGGTATCCAAAATGGCCAGTACAA...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAATTGTACTGGCCATTTTaGATACCAGGATTTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKLYWPF*IPGFVD Trigger: GTCTACAAATCCTGGTATCCAAAATGGCCAGTACAA...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGTTTTCAGATTTGTACTaGCCATTTTGGATACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STHLTSTPNYRKRQKSRRFSDLY*PFWIPG Trigger: TCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAA...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTATATTCTGCCATGGCTaGATTTCTTGGAGAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFIFCHG*ISWRVC Trigger: ACAAACTCTCCAAGAAATCCAGCCATGGCAGAATAT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTCTTCATATTCTGCCATaGCTGGATTTCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTLHILP*LDFLES Trigger: ACTCTCCAAGAAATCCAGCCATGGCAGAATATGAAG...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTTTGCCGCATGACAACTaGAACATTGCACGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLLPHDN*NIARCL Trigger: GAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAA...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTGATAAATCTGCAATTTaGGGATATTCTCCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFDKSAI*GYSPVS Trigger: AGACACAGGAGAATATCCCCAAATTGCAGATTTATC...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTATATTCTGCCATGGCTaGATTTCTTGGAGAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTIFCHG*ISWRVC Trigger: ACAAACTCTCCAAGAAATCCAGCCATGGCAGAATAT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTCGGCCAGTTCTGAAATaGCTTCAATCTGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLRPVLK*LQSGFF Trigger: GAAGAAGCCAGATTGAAGTCATTTCAGAACTGGCCG...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAATCCTTATTGGTGTCTaGAAGTACAAAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKILIGV*KYKSSS Trigger: ACTAGAACTTTTGTACTTGCAGACACCAATAAGGAT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTAGGATTTGTAGACTGTaGAGCACCATTTTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFRICRL*STIFKI Trigger: TATTTTGAAAATGGTGCTGCACAGTCTACAAATCCT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAAGGATTTGTAGACTGTaGAGCACCATTTTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKRICRL*STIFKI Trigger: TATTTTGAAAATGGTGCTGCACAGTCTACAAATCCT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTCATCCAATAGGTATTTaGACCCTGGGTACCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLHPIGI*TLGTTS Trigger: CGAAGTGGTACCCAGGGTGCAAATACCTATTGGATG...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTATTCTTCATCCTTATTaGTGTCTGCAAGTACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFILHPY*CLQVQK Trigger: CTTTTGTACTTGCAGACACCAATAAGGATGAAGAAT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTGATAAATCTGCAATTTaGGGATATTCTCCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTDKSAI*GYSPVS Trigger: AGACACAGGAGAATATCCCCAAATTGCAGATTTATC...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CAA 72 bp | TTAGACGGAAACAGTGCTGTTAGCATTGGTCTCCATTaGGAAACAGCAGATGCTAATGGAATGCAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDGNSAVSIGLH*ETADANGMQCR Trigger: TCTGCATTGCATTCCATTAGCATCTGCTGTTTCCAAATGGAGACCAATGCTAACAGCACTGTTTCCGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CAA 72 bp | GATGTTCTTGTGTTAACACTCTTGGTCTTCTCTCTTTaGTGTATGTGTCTGGGTGTAAGTGGTTACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLVLTLLVFSL*CMCLGVSGYLP Trigger: TGGCAGGTAACCACTTACACCCAGACACATACACAAAAGAGAGAAGACCAAGAGTGTTAACACAAGAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTCTATCTATTGCCGCATaGCAACTGAAACATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLLSIAA*QLKHCT Trigger: CGTGCAATGTTTCAGTTGTCATGCGGCAATAGATAG...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATGTGTCTTCCAACAGCTaGGTCTCCATACTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDVSSNS*VSILPS Trigger: AGATGGCAGTATGGAGACTCAGCTGTTGGAAGACAC...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTAGGATTTGTAGACTGTaGAGCACCATTTTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTRICRL*STIFKI Trigger: TATTTTGAAAATGGTGCTGCACAGTCTACAAATCCT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTATTCTTCATCCTTATTaGTGTCTGCAAGTACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTILHPY*CLQVQK Trigger: CTTTTGTACTTGCAGACACCAATAAGGATGAAGAAT...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTTCCGTATTATCTTTCTaGGCACTCACAAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLSVLSF*ALTRSA Trigger: TGCAGATCTTGTGAGTGCTCAGAAAGATAATACGGA...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATCATCCAATAGGTATTTaGACCCTGGGTACCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDHPIGI*TLGTTS Trigger: CGAAGTGGTACCCAGGGTGCAAATACCTATTGGATG...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTGGGACATTTGTCAACTaGTTCTGCACACTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLGTFVN*FCTLFT Trigger: TGTAAACAGTGTGCAGAAGCAGTTGACAAATGTCCC...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTCTTCATATTCTGCCATaGCTGGATTTCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLLHILP*LDFLES Trigger: ACTCTCCAAGAAATCCAGCCATGGCAGAATATGAAG...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATCGGGTATATGGTGTCTaGAATATCTACAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDRVYGV*NIYNLS Trigger: GGACAGGTTGTAGATATTTCAGACACCATATACCCG...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATCTGCTCCTTGTTAACTaGGGATGTCCATGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDLLLVN*GCPCSK Trigger: TTTGGAACATGGACATCCTCAGTTAACAAGGAGCAG...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCATCCAATAGGTATTTaGACCCTGGGTACCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTHPIGI*TLGTTS Trigger: CGAAGTGGTACCCAGGGTGCAAATACCTATTGGATG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTATATTCTGCCATGGCTaGATTTCTTGGAGAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLIFCHG*ISWRVC Trigger: ACAAACTCTCCAAGAAATCCAGCCATGGCAGAATAT...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCGGGTATATGGTGTCTaGAATATCTACAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTRVYGV*NIYNLS Trigger: GGACAGGTTGTAGATATTTCAGACACCATATACCCG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATCTTCATATTCTGCCATaGCTGGATTTCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDLHILP*LDFLES Trigger: ACTCTCCAAGAAATCCAGCCATGGCAGAATATGAAG...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGTCCGTATTATCTTTCTaGGCACTCACAAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTSVLSF*ALTRSA Trigger: TGCAGATCTTGTGAGTGCTCAGAAAGATAATACGGA...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTATCCTTATTGGTGTCTaGAAGTACAAAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKVAVALSIQRAQNINLILIGV*KYKSSS Trigger: ACTAGAACTTTTGTACTTGCAGACACCAATAAGGAT...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATTTGTACTGGCCATTTTaGATACCAGGATTTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDLYWPF*IPGFVD Trigger: GTCTACAAATCCTGGTATCCAAAATGGCCAGTACAA...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATATATTCTGCCATGGCTaGATTTCTTGGAGAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDIFCHG*ISWRVC Trigger: ACAAACTCTCCAAGAAATCCAGCCATGGCAGAATAT...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCTTCATATTCTGCCATaGCTGGATTTCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTLHILP*LDFLES Trigger: ACTCTCCAAGAAATCCAGCCATGGCAGAATATGAAG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATGATAAATCTGCAATTTaGGGATATTCTCCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDDKSAI*GYSPVS Trigger: AGACACAGGAGAATATCCCCAAATTGCAGATTTATC...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATTTTTCAGATTTGTACTaGCCATTTTGGATACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDFSDLY*PFWIPG Trigger: TCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAA...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATATCCTTATTGGTGTCTaGAAGTACAAAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDILIGV*KYKSSS Trigger: ACTAGAACTTTTGTACTTGCAGACACCAATAAGGAT...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGTTTTCAGATTTGTACTaGCCATTTTGGATACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTFSDLY*PFWIPG Trigger: TCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAA...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| 3UTR CAA 72 bp | CTGATTTGGCTCCAACTAGATACAGTGTTTTGCCATTaGTATTTTACACTTAACTATATCTGTGTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIWLQLDTVFCH*YFTLNYICVAF Trigger: AAAGGCAACACAGATATAGTTAAGTGTAAAATACAAATGGCAAAACACTGTATCTAGTTGGAGCCAAATCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGAGGATTTGTAGACTGTaGAGCACCATTTTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNSRMNFIQQKTISTRICRL*STIFKI Trigger: TATTTTGAAAATGGTGCTGCACAGTCTACAAATCCT...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTCCCACAACAAAAGCATaGCACTTGATCATCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFPTTKA*HLIISP Trigger: GGGGCTGATGATCAAGTGCAATGCTTTTGTTGTGGG...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTCAAACCCAGATATGTCTACCCCTGCCTCCCAAATGCTGGGATTAAAATGACAACTGAAACATaGCACGGTGTCTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGFKPRYVYPCLPNAGIKMTTET*HGVSFT Trigger: GGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCAT...TTTAATCCCAGCATTTGGGAGGCAGGGGTAGACATATCTGGGTTTGAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTATGACAACTGAAACATaGCACGGTGTCTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFMTTET*HGVSFT Trigger: GGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCAT...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGTTTGTACTGGCCATTTaGGATACCAGGATTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: STHLTSTPNYRKRQKSRRFVLAI*DTRICR Trigger: TCTACAAATCCTGGTATCCAAAATGGCCAGTACAAA...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACCTCACCTCTACCCCTAACTACAGGAAGAGGCAAAAGTCTAGGAGGGCAATGAAGTTTGACTaGACTCATCCTCCGTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: STHLTSTPNYRKRQKSRRAMKFD*THPPYY Trigger: ATAATACGGAGGATGAGTCAAGTCAAACTTCATTGC...CCTCCTAGACTTTTGCCTCTTCCTGTAGTTAGGGGTAGAGGTGAGGTGAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGGTGATTCAGAGCCGGTTATTCTGTGACCTTCCGAGTGACCATTTTGCAATGAAGTTTGACTaGACTCATCCTCCGTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SGVVIQSRLFCDLPSDHFAMKFD*THPPYY Trigger: ATAATACGGAGGATGAGTCAAGTCAAACTTCATTGC...AAAATGGTCACTCGGAAGGTCACAGAATAACCGGCTCTGAATCACCACCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | CATCTCTCCTCTTCCTTTATCCAGTATCTGGGGACTCAGAAGTCCAGGAAGACTGCAATGAAGTTTGACTaGACTCATCCTCCGTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: HLSSSFIQYLGTQKSRKTAMKFD*THPPYY Trigger: ATAATACGGAGGATGAGTCAAGTCAAACTTCATTGC...AGTCTTCCTGGACTTCTGAGTCCCCAGATACTGGATAAAGGAAGAGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCCTGTACAGATACAAAATACACACAAGCTGATTTGGCTCCAACTAGATATGACAACTGAAACATaGCACGGTGTCTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FCPVQIQNTHKLIWLQLDMTTET*HGVSFT Trigger: GGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCAT...ATCTAGTTGGAGCCAAATCAGCTTGTGTGTATTTTGTATCTGTACAGGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGCCCACAACAAAAGCATaGCACTTGATCATCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLLQNSRMNFIQQKTISTPTTKA*HLIISP Trigger: GGGGCTGATGATCAAGTGCAATGCTTTTGTTGTGGG...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTACTTCAAAATTCTAGAATGAACTTTATACAGCAAAAGACCATCAGCACGATGACAACTGAAACATaGCACGGTGTCTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLLQNSRMNFIQQKTISTMTTET*HGVSFT Trigger: GGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCAT...CGTGCTGATGGTCTTTTGCTGTATAAAGTTCATTCTAGAATTTTGAAGTAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCTAAGGTTGCAGTGGCACTTTCCATTCAGAGAGCTCAAAATATAAATCTTGCAATGAAGTTTGACTaGACTCATCCTCCGTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: AAKVAVALSIQRAQNINLAMKFD*THPPYY Trigger: ATAATACGGAGGATGAGTCAAGTCAAACTTCATTGC...AAGATTTATATTTTGAGCTCTCTGAATGGAAAGTGCCACTGCAACCTTAGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||
| CDS TCA 72 bp | GCAATTTGGGGATATTCTCCTGTGTCTTCCAACAGCTaGGTCTCCATACTGCCATCTATCTATTGCCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: AIWGYSPVSSNS*VSILPSIYCRM Trigger: CATGCGGCAATAGATAGATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGAGAATATCCCCAAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 ENSMUST00000224454.2 |
||
| CDS CCA 72 bp | TCCAGTTCTCAAGAGATAATCAGCATGAGTCTCAGGTaGCCTGTCAGGGGCAAAAGGATTTCTATTTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSQEIISMSLR*PVRGKRISISH Trigger: GTGGGAAATAGAAATCCTTTTGCCCCTGACAGGCCACCTGAGACTCATGCTGATTATCTCTTGAGAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026978.7 ENSMUST00000055483.10 ENSMUST00000115094.8 ENSMUST00000115095.9 |
||