RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XDH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024066

Ensembl transcript IDs: ENSMUST00000024866.6, ENSMUST00000232783.2, ENSMUST00000233392.2, ENSMUST00000233621.2

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCGCCGGAATTCCACCATCCCACCAGGGGCGTCGGGGGCCAGGTaGAGCTCCTCTGCCAAGCCAGCACACACATCCTGCAGCAACTCC +
Preference number: 1 (lower is better)
Translates to: VRRNSTIPPGASGAR*SSSAKPAHTSCSNS
Trigger: GGAGTTGCTGCAGGATGTGTGTGCTGGCTTGGCAGAGGAGCTGCACCTGGCCCCCGACGCCCCTGGTGGGATGGTGGAATTCCGGCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp CTCGCGGTGATGATGTTCCCGCCAATGGACGCCACGGACTTGACCTaGTTGCCAGCAAACCAGCGCAGCTGCTCCATCACGCCTCTGAAC +
Preference number: 1 (lower is better)
Translates to: LAVMMFPPMDATDLT*LPANQRSCSITPLN
Trigger: GTTCAGAGGCGTGATGGAGCAGCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCATTGGCGGGAACATCATCACCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp GGATCTTCTCCGGAGTGGCGGGGCTGTCTAGCTGGAAGAGCTGTTTaGCGTTACTGTCTCCGTGCTGAGCTCGAGCTGCGCGGATGGCAT +
Preference number: 1 (lower is better)
Translates to: GSSPEWRGCLAGRAV*RYCLRAELELRGWH
Trigger: ATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp AATGTCATCACAGTACACAGCCTCCCCGGATGCCTGCATGTCTGCTaGCAGGTGAGGCATGGGCCTGCCCACCATGTCCTCCTCAGACTG +
Preference number: 1 (lower is better)
Translates to: NVITVHSLPGCLHVC*QVRHGPAHHVLLRL
Trigger: CAGTCTGAGGAGGACATGGTGGGCAGGCCCATGCCTCACCTGGCAGCAGACATGCAGGCATCCGGGGAGGCTGTGTACTGTGATGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp AACCAGCGCAGCTGCTCCATCACGCCTCTGAACACCTCTGTCCTCTaGTCTGGAAGTGTAGCAATCGCGTCCGCCAGGACACTTTCCACC +
Preference number: 1 (lower is better)
Translates to: NQRSCSITPLNTSVL*SGSVAIASARTLST
Trigger: GGTGGAAAGTGTCCTGGCGGACGCGATTGCTACACTTCCAGAGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGCAGCTGCGCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp ATGGACGCCACGGACTTGACCTGCTTGCCAGCAAACCAGCGCAGCTaGTCCATCACGCCTCTGAACACCTCTGTCCTCTGCTCTGGAAGT +
Preference number: 1 (lower is better)
Translates to: MDATDLTCLPANQRS*SITPLNTSVLCSGS
Trigger: ACTTCCAGAGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGCAGCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp CATGCAACGTACAGGGCGGCCTGTCTTGTATGCAGCCAAGGCCACTaGTGTGGATATCAGAGTGCTCCGGGTCTCCTTCCCTCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: HATYRAACLVCSQGH*CGYQSAPGLLPSKA
Trigger: GGCTTTGGAGGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCATACAAGACAGGCCGCCCTGTACGTTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GTCGCGGAGCAGGGATACTCTGAACTCAATGGGGATGCTGCCAAATaGAGGGATCTTGTAGGTACTGGGGCCACGAGTGTGCAGGCTCCC +
Preference number: 1 (lower is better)
Translates to: VAEQGYSELNGDAAK*RDLVGTGATSVQAP
Trigger: GGGAGCCTGCACACTCGTGGCCCCAGTACCTACAAGATCCCTGCATTTGGCAGCATCCCCATTGAGTTCAGAGTATCCCTGCTCCGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GATCGAAGAAGCCAGGAAAAGAGGTGGCTCGCCGACAGCCTTGGATaGATAGATGGCCCTCTTGTTGGGGCAGTCGCGGAGCAGGGATAC +
Preference number: 1 (lower is better)
Translates to: DRRSQEKRWLADSLG*IDGPLVGAVAEQGY
Trigger: GTATCCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCTATGCATCCAAGGCTGTCGGCGAGCCACCTCTTTTCCTGGCTTCTTCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp GCGCAGCTGCTCCATCACGCCTCTGAACACCTCTGTCCTCTGCTCTaGAAGTGTAGCAATCGCGTCCGCCAGGACACTTTCCACCAAGCT +
Preference number: 1 (lower is better)
Translates to: AQLLHHASEHLCPLL*KCSNRVRQDTFHQA
Trigger: AGCTTGGTGGAAAGTGTCCTGGCGGACGCGATTGCTACACTTCCAGAGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGCAGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp AGAAGATCGAAGAAGCCAGGAAAAGAGGTGGCTCGCCGACAGCCTTaGATGCATAGATGGCCCTCTTGTTGGGGCAGTCGCGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RRSKKPGKEVARRQP*MHRWPSCWGSRGAG
Trigger: CCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCTATGCATCCAAGGCTGTCGGCGAGCCACCTCTTTTCCTGGCTTCTTCGATCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp GAGTGTGCAGGCTCCCCTCGGGAGAGTAGTGCAGCTCCTCCATGGTaGAAAGACCAAGACCCTGGACAAATGCCCCTTCTACCTGTCCGA +
Preference number: 1 (lower is better)
Translates to: ECAGSPRESSAAPPW*KDQDPGQMPLLPVR
Trigger: TCGGACAGGTAGAAGGGGCATTTGTCCAGGGTCTTGGTCTTTTCACCATGGAGGAGCTGCACTACTCTCCCGAGGGGAGCCTGCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp CTCAGACTGACCCTTGGGCACCTCTTGGAAAAGCTGGACGTTAGCTaGAGGATCCTTCTGAAAGAGCAGGGTGGCGCTGGCAAAGGTGGG +
Preference number: 1 (lower is better)
Translates to: LRLTLGHLLEKLDVS*RILLKEQGGAGKGG
Trigger: CCCACCTTTGCCAGCGCCACCCTGCTCTTTCAGAAGGATCCTCCAGCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGGTCAGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp CGAAGAGCTCCATCTCGCCTGCCTCGCCTTTCGGCACGGCAATGGTaGAGTGGGTCTCCAGATAGAAGTGCTCCTGGCCACCAATATATA +
Preference number: 1 (lower is better)
Translates to: RRAPSRLPRLSARQW*SGSPDRSAPGHQYI
Trigger: TATATATTGGTGGCCAGGAGCACTTCTATCTGGAGACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGCTCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GGTTTTCATGGTGTTCTGTGTGCTCACGAAGAGCTCCATCTCGCCTaGCTCGCCTTTCGGCACGGCAATGGTGCAGTGGGTCTCCAGATA +
Preference number: 1 (lower is better)
Translates to: GFHGVLCAHEELHLA*LAFRHGNGAVGLQI
Trigger: TATCTGGAGACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGCTCTTCGTGAGCACACAGAACACCATGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp GCAACTCCTCATTCCAGGACTTGGACAGCTGCTTCGGAGTGGTCTTaGGGGCTGAGACAGTTCTGTCAGCCATCCCTCCAAAGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: ATPHSRTWTAASEWS*GLRQFCQPSLQSKG
Trigger: CCCTTTGCTTTGGAGGGATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp TTGGGCACCTCTTGGAAAAGCTGGACGTTAGCTGGAGGATCCTTCTaGAAGAGCAGGGTGGCGCTGGCAAAGGTGGGGTCCAGTTTACCA +
Preference number: 1 (lower is better)
Translates to: LGTSWKSWTLAGGSF*KSRVALAKVGSSLP
Trigger: TGGTAAACTGGACCCCACCTTTGCCAGCGCCACCCTGCTCTTTCAGAAGGATCCTCCAGCTAACGTCCAGCTTTTCCAAGAGGTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp GGGCTGTCTAGCTGGAAGAGCTGTTTGGCGTTACTGTCTCCGTGCTaGGCTCGAGCTGCGCGGATGGCATCTTTGATGGCAAAGAAGATC +
Preference number: 1 (lower is better)
Translates to: GLSSWKSCLALLSPC*ARAARMASLMAKKI
Trigger: GATCTTCTTTGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAGCTCTTCCAGCTAGACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GAAGAAGGTATGGTCCATCCAGACCGTTCTCTTGGTACCTCTAGATaGGAGGGTCAGCTTGGCTCGACTGGCCATGAGCACAGGGTTGAG +
Preference number: 1 (lower is better)
Translates to: EEGMVHPDRSLGTSR*EGQLGSTGHEHRVE
Trigger: CTCAACCCTGTGCTCATGGCCAGTCGAGCCAAGCTGACCCTCGCATCTAGAGGTACCAAGAGAACGGTCTGGATGGACCATACCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GCACACACATCCTGCAGCAACTCCTCATTCCAGGACTTGGACAGCTaGTTCGGAGTGGTCTTGAGGGCTGAGACAGTTCTGTCAGCCATC +
Preference number: 1 (lower is better)
Translates to: AHTSCSNSSFQDLDS*FGVVLRAETVLSAI
Trigger: GATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGCTGCAGGATGTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp GGGTGCTGGGCTTTGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTaGATCCAGGTCACACGTTCCCCTTCAAAACGCAACGTCTTCCGG +
Preference number: 1 (lower is better)
Translates to: GCWALRSSSSSMVET*IQVTRSPSKRNVFR
Trigger: CCGGAAGACGTTGCGTTTTGAAGGGGAACGTGTGACCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp TCTCTGTGTTTCCCACCACCAGCTTGGCATCAGGGTGCTGGGCTTTaGGGTCAAGCAGTTCCTCCATGGTTGAAACCTGGATCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: SLCFPPPAWHQGAGL*GQAVPPWLKPGSRS
Trigger: TGACCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp CTCATTCCAGGACTTGGACAGCTGCTTCGGAGTGGTCTTGAGGGCTaGGACAGTTCTGTCAGCCATCCCTCCAAAGCAAAGGGACAGTTC +
Preference number: 1 (lower is better)
Translates to: LIPGLGQLLRSGLEG*DSSVSHPSKAKGQF
Trigger: GAACTGTCCCTTTGCTTTGGAGGGATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp CATAGATGGCCCTCTTGTTGGGGCAGTCGCGGAGCAGGGATACTCTaGACTCAATGGGGATGCTGCCAAATGCAGGGATCTTGTAGGTAC +
Preference number: 1 (lower is better)
Translates to: HRWPSCWGSRGAGIL*TQWGCCQMQGSCRY
Trigger: GTACCTACAAGATCCCTGCATTTGGCAGCATCCCCATTGAGTTCAGAGTATCCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp GATTTACAGTTTTCTGGTGTTCCAGTGGCACACAGGGTGGTGAACTaGTCCACACAAGCGTTTCGGATCTTCTCCGGAGTGGCGGGGCTG +
Preference number: 1 (lower is better)
Translates to: DLQFSGVPVAHRVVN*STQAFRIFSGVAGL
Trigger: CAGCCCCGCCACTCCGGAGAAGATCCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTGTGCCACTGGAACACCAGAAAACTGTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GAGACAGTTCTGTCAGCCATCCCTCCAAAGCAAAGGGACAGTTCCTaGACTTCAGTGGTCCCTGGCTTGAACAGGACTCTCATGCCACTG +
Preference number: 1 (lower is better)
Translates to: ETVLSAIPPKQRDSS*TSVVPGLNRTLMPL
Trigger: CAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTTGGAGGGATGGCTGACAGAACTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp CTGGAAGAGCTGTTTGGCGTTACTGTCTCCGTGCTGAGCTCGAGCTaGGCGGATGGCATCTTTGATGGCAAAGAAGATCGAAGAAGCCAG +
Preference number: 1 (lower is better)
Translates to: LEELFGVTVSVLSSS*ADGIFDGKEDRRSQ
Trigger: CTGGCTTCTTCGATCTTCTTTGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAGCTCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp CATCCCTCCAAAGCAAAGGGACAGTTCCTGCACTTCAGTGGTCCCTaGCTTGAACAGGACTCTCATGCCACTGGTCACCTTGGCAATGTC +
Preference number: 1 (lower is better)
Translates to: HPSKAKGQFLHFSGP*LEQDSHATGHLGNV
Trigger: GACATTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTTGGAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp TGTACATGTTTTTCCTCCGTACCTCCTCTGCAGGCAGCCCACAGGTaGCAGCGACCTCACTCATCCAGTATTCTGCGATTAGCATCCCCT +
Preference number: 1 (lower is better)
Translates to: CTCFSSVPPLQAAHR*QRPHSSSILRLASP
Trigger: AGGGGATGCTAATCGCAGAATACTGGATGAGTGAGGTCGCTGTCACCTGTGGGCTGCCTGCAGAGGAGGTACGGAGGAAAAACATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp ACCAGGATTTACAGTTTTCTGGTGTTCCAGTGGCACACAGGGTGGTaGACTGATCCACACAAGCGTTTCGGATCTTCTCCGGAGTGGCGG +
Preference number: 1 (lower is better)
Translates to: TRIYSFLVFQWHTGW*TDPHKRFGSSPEWR
Trigger: CCGCCACTCCGGAGAAGATCCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTGTGCCACTGGAACACCAGAAAACTGTAAATCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp TCAATGCCTATCTCTGTGTTTCCCACCACCAGCTTGGCATCAGGGTaGTGGGCTTTGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTGG +
Preference number: 1 (lower is better)
Translates to: SMPISVFPTTSLASG*WALRSSSSSMVETW
Trigger: CCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGATAGGCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp ATGCCTATCTCTGTGTTTCCCACCACCAGCTTGGCATCAGGGTGCTaGGCTTTGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTGGATC +
Preference number: 1 (lower is better)
Translates to: MPISVFPTTSLASGC*ALRSSSSSMVETWI
Trigger: GATCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGATAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp CTCCAAAGCAAAGGGACAGTTCCTGCACTTCAGTGGTCCCTGGCTTaGACAGGACTCTCATGCCACTGGTCACCTTGGCAATGTCATCTT +
Preference number: 1 (lower is better)
Translates to: LQSKGTVPALQWSLA*TGLSCHWSPWQCHL
Trigger: AAGATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp ATTATACTCCGAGAGAGATCCTCACTGTTCCCGCCATTGCTGAAGTaGGCCACCTCCAGTGCCACTATAGTCCCAGTCTTCATGAAGCCC +
Preference number: 1 (lower is better)
Translates to: IILRERSSLFPPLLK*ATSSATIVPVFMKP
Trigger: GGGCTTCATGAAGACTGGGACTATAGTGGCACTGGAGGTGGCTCACTTCAGCAATGGCGGGAACAGTGAGGATCTCTCTCGGAGTATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp GAGATCCTCACTGTTCCCGCCATTGCTGAAGTGAGCCACCTCCAGTaGCACTATAGTCCCAGTCTTCATGAAGCCCACCTTGTATTTAGC +
Preference number: 1 (lower is better)
Translates to: EILTVPAIAEVSHLQ*HYSPSLHEAHLVFS
Trigger: GCTAAATACAAGGTGGGCTTCATGAAGACTGGGACTATAGTGGCACTGGAGGTGGCTCACTTCAGCAATGGCGGGAACAGTGAGGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp TCCTGCTGTAGGGGATCACAATGGACACCAATATCTCCTCTGGACTaGGCAGAGTCCTTCTATAGCCAGGGAAGAAGGTATGGTCCATCC +
Preference number: 1 (lower is better)
Translates to: SCCRGSQWTPISPLD*AESFYSQGRRYGPS
Trigger: GGATGGACCATACCTTCTTCCCTGGCTATAGAAGGACTCTGCTCAGTCCAGAGGAGATATTGGTGTCCATTGTGATCCCCTACAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTaGTGGCTTGGCAGATATAAGCTCTCTGAAGAAAGCATGCAGATC +
Preference number: 1 (lower is better)
Translates to: PLKTMSVQLRLQHGP*WLGRYKLSEESMQI
Trigger: GATCTGCATGCTTTCTTCAGAGAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CCA 90 bp ACCCTTCCTGCTGTAGGGGATCACAATGGACACCAATATCTCCTCTaGACTGAGCAGAGTCCTTCTATAGCCAGGGAAGAAGGTATGGTC +
Preference number: 1 (lower is better)
Translates to: TLPAVGDHNGHQYLL*TEQSPSIAREEGMV
Trigger: GACCATACCTTCTTCCCTGGCTATAGAAGGACTCTGCTCAGTCCAGAGGAGATATTGGTGTCCATTGTGATCCCCTACAGCAGGAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp TGGCAATTCTCTCCTGGACAGGATGCAGCTTCTTGGTGTTTCCTATaGCTTCCACAGTTGTCACAGCAACATGATGCAAGGAGCAGATGG +
Preference number: 1 (lower is better)
Translates to: WQFSPGQDAASWCFL*LPQLSQQHDARSRW
Trigger: CCATCTGCTCCTTGCATCATGTTGCTGTGACAACTGTGGAAGGCATAGGAAACACCAAGAAGCTGCATCCTGTCCAGGAGAGAATTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR CCA 90 bp ATACTCATGACAATACCAGGGGTACAGAACCCACACTGGGAACCATaGCTTTTGGCAATTCTCTCCTGGACAGGATGCAGCTTCTTGGTG +
Preference number: 1 (lower is better)
Translates to: ILMTIPGVQNPHWEP*LLAILSWTGCSFLV
Trigger: CACCAAGAAGCTGCATCCTGTCCAGGAGAGAATTGCCAAAAGCCATGGTTCCCAGTGTGGGTTCTGTACCCCTGGTATTGTCATGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR GCA 90 bp ATAAAGAAGATGAGGGAGCAATCGTCTGGTCCTTTGTTTGGCTCATaGAGCAGTTTGGGTTGTTTCCACTTCCTCCACAGCACCCACCAT +
Preference number: 1 (lower is better)
Translates to: IKKMREQSSGPLFGS*SSLGCFHFLHSTHH
Trigger: ATGGTGGGTGCTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCCCTCATCTTCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp GGGTTGAATAAAGAAGATGAGGGAGCAATCGTCTGGTCCTTTGTTTaGCTCATGCAGCAGTTTGGGTTGTTTCCACTTCCTCCACAGCAC +
Preference number: 1 (lower is better)
Translates to: GLNKEDEGAIVWSFV*LMQQFGLFPLPPQH
Trigger: GTGCTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCCCTCATCTTCTTTATTCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp GGAGTGTCTTTCAGCCTCAGCAACTCTGGGGGAAAGATGGGCTCTTaGGTGGGATCTAAAGGTTTGAAATCCTCCGGGTTGAATAAAGAA +
Preference number: 1 (lower is better)
Translates to: GVSFSLSNSGGKMGS*VGSKGLKSSGLNKE
Trigger: TTCTTTATTCAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGAGCCCATCTTTCCCCCAGAGTTGCTGAGGCTGAAAGACACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp CTGTTAAGCAGTCAATTTCTACTTCTGAGCAAGCCACCCCATAACTaGAGTAGTGGAAGGGGTTCCCAGAGTTTGTCTCAAAGCTGTAAC +
Preference number: 1 (lower is better)
Translates to: LLSSQFLLLSKPPHN*SSGRGSQSLSQSCN
Trigger: GTTACAGCTTTGAGACAAACTCTGGGAACCCCTTCCACTACTTCAGTTATGGGGTGGCTTGCTCAGAAGTAGAAATTGACTGCTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 90 bp CCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTaGTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTC +
Preference number: 1 (lower is better)
Translates to: PRITQNCHLGQQLPV*LLVCLQLMIWITIV
Trigger: GACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR GCA 90 bp TTTCACTCGGACTACAATTCTGTTGTCTGGAACACCCAACATCTTTaGAATAAAGCTCTGGGTTTTCATGGTGTTCTGTGTGCTCACGAA +
Preference number: 1 (lower is better)
Translates to: FHSDYNSVVWNTQHL*NKALGFHGVLCAHE
Trigger: TTCGTGAGCACACAGAACACCATGAAAACCCAGAGCTTTATTGCAAAGATGTTGGGTGTTCCAGACAACAGAATTGTAGTCCGAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 90 bp AAAGCCTCCACCCATTCTTTTCACTCGGACTACAATTCTGTTGTCTaGAACACCCAACATCTTTGCAATAAAGCTCTGGGTTTTCATGGT +
Preference number: 1 (lower is better)
Translates to: KASTHSFHSDYNSVV*NTQHLCNKALGFHG
Trigger: ACCATGAAAACCCAGAGCTTTATTGCAAAGATGTTGGGTGTTCCAGACAACAGAATTGTAGTCCGAGTGAAAAGAATGGGTGGAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 90 bp GGTTTGTTTGCAACTCATGATTTGGATCACAATTGTCCATTTTCTTaGAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCT +
Preference number: 1 (lower is better)
Translates to: GLFATHDLDHNCPFS*KCHPAESPWDVWKS
Trigger: AGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAGAAAATGGACAATTGTGATCCAAATCATGAGTTGCAAACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR TCA 90 bp AGTAGGGACATAATGCAAACCCTTGCTAACCTCATTTCAAATATGTaGTCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGC +
Preference number: 1 (lower is better)
Translates to: SRDIMQTLANLISNM*SKMDSELPRITQNC
Trigger: GCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATATTTGAAATGAGGTTAGCAAGGGTTTGCATTATGTCCCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 90 bp CTAGATGCGAGGGTCAGCTTGGCTCGACTGGCCATGAGCACAGGGTaGAGGTCAGAGATGGGGCTCGCGGTGATGATGTTCCCGCCAATG +
Preference number: 2 (lower is better)
Translates to: LDARVSLARLAMSTG*RSEMGLAVMMFPPM
Trigger: CATTGGCGGGAACATCATCACCGCGAGCCCCATCTCTGACCTCAACCCTGTGCTCATGGCCAGTCGAGCCAAGCTGACCCTCGCATCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp AAGAGCTCCATCTCGCCTGCCTCGCCTTTCGGCACGGCAATGGTGCAGTGGGTCAGGCCCATGTGCCACTaGGGTCAGTTCAAGGATCCA +
Preference number: 2 (lower is better)
Translates to: KSSISPASPFGTAMVQWVRPMCH*GQFKDP
Trigger: TGGATCCTTGAACTGACCTCAGTGGCACATGGGCCT...GACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp ATGTCCTCGTCTCGGTCCAGCATGCAACGTACAGGGCGGCCTGTCTaGTATGCAGCCAAGGCCACTGCTGTGGATATCAGAGTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: MSSSRSSMQRTGRPV*YAAKATAVDIRVLR
Trigger: CCGGAGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCATACAAGACAGGCCGCCCTGTACGTTGCATGCTGGACCGAGACGAGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp CCACTGCTGTGGATATCAGAGTGCTCCGGGTCTCCTTCCCTCCAAAGCCTCCACGCTCCATCACGCCTCTaGACACCTCTGTCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: PLLWISECSGSPSLQSLHAPSRL*TPLSSA
Trigger: AGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGC...GTGGAGGCTTTGGAGGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AGCATGGGCCCGCGTGCTGGTGACCAGCCTGAGGGACAGCTCATTCTCATAGCGCCTGCTGAGTCCCCATaGGATGTGTGGAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: SMGPRAGDQPEGQLILIAPAESP*DVWKSG
Trigger: TCCAGATTTCCACACATCCCATGGGGACTCAGCAGG...CGCTATGAGAATGAGCTGTCCCTCAGGCTGGTCACCAGCACGCGGGCCCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AGCATGGGCCCGCGTGCTGGTGACCAGCCTGAGGGACAGCTCATTCTCATAGCGCCAGGGAAGAAGGTATaGTCCATCCAGACCGTTCTC +
Preference number: 2 (lower is better)
Translates to: SMGPRAGDQPEGQLILIAPGKKV*SIQTVL
Trigger: GAGAACGGTCTGGATGGACCATACCTTCTTCCCTGG...CGCTATGAGAATGAGCTGTCCCTCAGGCTGGTCACCAGCACGCGGGCCCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp GGGCCTGCCCACCATGTCCTCCTCAGACTGACCCTTGGGCACCTCTaGGAAAAGCTGGACGTTAGCTGGAGGATCCTTCTGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GPAHHVLLRLTLGHL*EKLDVSWRILLKEQ
Trigger: CTGCTCTTTCAGAAGGATCCTCCAGCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACATGGTGGGCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp CAAGCGTTTCGGATCTTCTCCGGAGTGGCGGGGCTGTCTAGCTGGAAGAGCTGTGTGCTGAGCTCGAGCTaGGCGGATGGCATCTTTGAT +
Preference number: 2 (lower is better)
Translates to: QAFRIFSGVAGLSSWKSCVLSSS*ADGIFD
Trigger: ATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCAC...ACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCCGAAACGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp GCCAAGCCAGCACACACATCCTGCAGCAACTCCTCATTCCAGGACTaGGACAGCTGCTTCGGAGTGGTCTTGAGGGCTGAGACAGTTCTG +
Preference number: 2 (lower is better)
Translates to: AKPAHTSCSNSSFQD*DSCFGVVLRAETVL
Trigger: CAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGCTGCAGGATGTGTGTGCTGGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp GTTACTGTCTCCGTGCTGAGCTCGAGCTGCGCGGATGGCATCTTTGATGGCAAAACTGGGAGCTCGCTATaGACTCATCCCAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: VTVSVLSSSCADGIFDGKTGSSL*THPSTW
Trigger: CCAGGTGCTGGGATGAGTGCATAGCGAGCTCCCAGT...TTTGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp GTACAGCGGCAGAGGTTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTAGGCGATCATCACGGTGCATaGCCCACAGCCACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VQRQRFPWKAFSISSTVGDHHGA*PTATFS
Trigger: GGAGAAGGTGGCTGTGGGGCATGCACCGTGATGATC...GCCTACTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR CAA 90 bp TCAGTGGTCCCTGGCTTGAACAGGACTCTCATGCCACTGGTCACCTaGGCAATGTCATCTTCTCTCCTGGAGGCCTGCTTGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SVVPGLNRTLMPLVT*AMSSSLLEACLKAE
Trigger: CTCAGCCTTCAAGCAGGCCTCCAGGAGAGAAGATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp CCACTGCTGTGGATATCAGAGTGCTCCGGGTCTCCTTCCCTCCAAAGCCTCCACGGACATCCTCTGAGGTaGGGAAACAAACAAACCCTG +
Preference number: 2 (lower is better)
Translates to: PLLWISECSGSPSLQSLHGHPLR*GNKQTL
Trigger: CAGGGTTTGTTTGTTTCCTCACCTCAGAGGATGTCC...GTGGAGGCTTTGGAGGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCCTCAAAACTGCCACTTaGGCCAGCAGCTCCCCGTTT +
Preference number: 2 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLLKTAT*ASSSPF
Trigger: AAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAG...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 90 bp ATCTCTGTGTTTCCCACCACCAGCTTGGCATCAGGGTGCTGGGCTTaGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTGGATCCAGGTC +
Preference number: 2 (lower is better)
Translates to: ISVFPTTSLASGCWA*RSSSSSMVETWIQV
Trigger: GACCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCAAAATGCCATCCTGCTaGGTCCCCATGGGATGTGTG +
Preference number: 2 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLKMPSC*VPMGCV
Trigger: CACACATCCCATGGGGACTCAGCAGGATGGCATTTT...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp CAAGCGTTTCGGATCTTCTCCGGAGTGGCGGGGCTGTCTAGCTGGAAGAGCTGTTTCAAGGATCCAGGCTaGGCAGATGATCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: QAFRIFSGVAGLSSWKSCFKDPG*ADDQRK
Trigger: TTTCCTCTGATCATCTGCCCAGCCTGGATCCTTGAA...ACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCCGAAACGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTAGATGGCCCTCTTGTTaGGGCAGTCGCGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LENAILLSPHGMCGNLDTRWPSC*GSRGAG
Trigger: CCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCT...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp GGAGCAATCGTCTGGTCCTTTGTTTGGCTCATGCAGCAGTTTGGGTaGTTTCCACTTCCTCCACAGCACCCACCATCCTTGGCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: GAIVWSFVWLMQQFG*FPLPPQHPPSLAKV
Trigger: GACCTTTGCCAAGGATGGTGGGTGCTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp CCTCCAAAGCAAAGGGACAGTTCCTGCACTTCAGTGGTCCCTGGCTaGAACAGGACTCTCATGCCACTGGTCACCTTGGCAATGTCATCT +
Preference number: 2 (lower is better)
Translates to: PPKQRDSSCTSVVPG*NRTLMPLVTLAMSS
Trigger: AGATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp GGGACATCCTCTGAGGTGAGGAAACAAACAAACCCTGGCACCTTCTaGGCTTCTGAAGTGTCGATGGACATGATTTTAGCATGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GTSSEVRKQTNPGTF*ASEVSMDMILAWAR
Trigger: GCGGGCCCATGCTAAAATCATGTCCATCGACACTTCAGAAGCCAAGAAGGTGCCAGGGTTTGTTTGTTTCCTCACCTCAGAGGATGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp GCGGCAGAGGTTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTAGGCTCAGGGTGTGTACATACTCATaGCAATACCAGGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: AAEVSLEGILDLLDSRLRVCTYS*QYQGYR
Trigger: TCTGTACCCCTGGTATTGTCATGAGTATGTACACAC...CCTGAGCCTACTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR GCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAAGAATTACTCAAAACTaGCACTTGGGCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIRITQN*HLGQQL
Trigger: GAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp GAACGATCTTGTTCTGAAGGCGGTCATACTTGGAGATCATCACGGTGCATGCCCGGAATCCCTGGAGGATaGGTCTATAGCCTGTACAGC +
Preference number: 2 (lower is better)
Translates to: ERSCSEGGHTWRSSRCMPGIPGG*VYSLYS
Trigger: GCTGTACAGGCTATAGACCCATCCTCCAGGGATTCC...GGGCATGCACCGTGATGATCTCCAAGTATGACCGCCTTCAGAACAAGATCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR CCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTAGCACCCACCATCCTTaGCAAAGGTCCGGAATCCCT +
Preference number: 2 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLISTHHP*QRSGIP
Trigger: AGGGATTCCGGACCTTTGCCAAGGATGGTGGGTGCT...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp GGAGGATGGGTCTATAGCCTGTACAGCGGCAGAGGTTTCCTTGGAAGGCATTCTCCACACTGGGAACCATaGCTTTTGGCAATTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GGWVYSLYSGRGFLGRHSPHWEP*LLAILS
Trigger: GGAGAGAATTGCCAAAAGCCATGGTTCCCAGTGTGG...AGAATGCCTTCCAAGGAAACCTCTGCCGCTGTACAGGCTATAGACCCATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR TCA 90 bp GATCTCCTCGACAGTAGGCTCAGGCTTGTTTCGGAGCAGTGTGTACATACTCATGTTGTCACAGCAACATaGTGCAAGGAGCAGATGGGG +
Preference number: 2 (lower is better)
Translates to: DLLDSRLRLVSEQCVHTHVVTAT*CKEQMG
Trigger: CCCCATCTGCTCCTTGCATCATGTTGCTGTGACAAC...ATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGTCGAGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR GCA 90 bp AGCCTGTACAGCGGCAGAGGTTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTCTTGGTGTTTCCTATaGCTTCCACAGTTGTCACAG +
Preference number: 2 (lower is better)
Translates to: SLYSGRGFLGRHSRSPRQSWCFL*LPQLSQ
Trigger: CTGTGACAACTGTGGAAGGCATAGGAAACACCAAGA...CTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGCTGTACAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR CCA 90 bp TGGAATACAGCTCTTTCCATTATACTCCGAGAGAGATCCTCACTGTTCCCGCCACTCAAAACTGCCACTTaGGCCAGCAGCTCCCCGTTT +
Preference number: 2 (lower is better)
Translates to: WNTALSIILRERSSLFPPLKTAT*ASSSPF
Trigger: AAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAG...TGGCGGGAACAGTGAGGATCTCTCTCGGAGTATAATGGAAAGAGCTGTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGCAAGCAGTTCCTCCATaGTTGAAACCTGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVQAVPP*LKPGSR
Trigger: CCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTG...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTCCACCTGAACCATCTTaGTGTGAAGGCCTTGACCCA +
Preference number: 2 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLIPPEPS*CEGLDP
Trigger: TGGGTCAAGGCCTTCACACCAAGATGGTTCAGGTGG...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp TGTACAGCGGCAGAGGTTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTAGGTTGGCAATTCTCTCCTaGACAGGATGCAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: CTAAEVSLEGILDLLDSRLAILS*TGCSFL
Trigger: CAAGAAGCTGCATCCTGTCCAGGAGAGAATTGCCAA...CCTACTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR TCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTAGTGGTCTTGAGGGCTaGGACAGTTCTGTCAGCCAT +
Preference number: 2 (lower is better)
Translates to: LENAILLSPHGMCGNLDTSGLEG*DSSVSH
Trigger: ATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACT...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTCCTGCTGAGTCCCCATaGGATGTGTGGAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: LENAILLSPHGMCGNLDTPAESP*DVWKSG
Trigger: TCCAGATTTCCACACATCCCATGGGGACTCAGCAGG...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp CTCCAGTCTTTTCAGTATGGTCTGACAGGCTTCATAAATGGCCTGGCCATTGAGACCCTGGCACCTTCTTaGCTTCTGAAGTGTCGATGG +
Preference number: 2 (lower is better)
Translates to: LQSFQYGLTGFINGLAIETLAPS*LLKCRW
Trigger: CCATCGACACTTCAGAAGCCAAGAAGGTGCCAGGGT...CTCAATGGCCAGGCCATTTATGAAGCCTGTCAGACCATACTGAAAAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp GATCTCCTCGACAGTAGGCTCAGGCTTGTTTCGGAGCAGTGTGTACATACTCATGTACAGAACCCACACTaGGAACCATGGCTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: DLLDSRLRLVSEQCVHTHVQNPH*EPWLLA
Trigger: TGCCAAAAGCCATGGTTCCCAGTGTGGGTTCTGTAC...ATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGTCGAGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR CAA 90 bp AGCAACTCTGGGGGAAAGATGGGCTCTTGGGTGGGATCTAAAGGTTaGAAATCCTCCGGGTTGAATAAAGAAGATGAGGGAGCAATCGTC +
Preference number: 2 (lower is better)
Translates to: SNSGGKMGSWVGSKG*KSSGLNKEDEGAIV
Trigger: GACGATTGCTCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGAGCCCATCTTTCCCCCAGAGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp TTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTAGGCTCAGGCTaGTTTCGGAGCAGTGTGTACATACTCATGACAATACCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: FPWKAFSISSTVGSG*FRSSVYILMTIPGV
Trigger: TACCCCTGGTATTGTCATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR GCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTAGAATTACTCAAAACTaGCACTTGGGCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLIRITQN*HLGQQL
Trigger: GAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 90 bp TTAAATTTCATTTCAATGCCTATCTCTGTGTTTCCCACCACCAGCTaGGCATCAGGGTGCTGGGCTTTGAGGTCAAGCAGTTCCTCCATG +
Preference number: 2 (lower is better)
Translates to: LNFISMPISVFPTTS*ASGCWALRSSSSSM
Trigger: CATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGATAGGCATTGAAATGAAATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp CACAGCACCAATGATGTGCCCAACACAAGTAACCTCATCCTTCGCAAAGACAGTAAAACTCACCCTTCCTaGTGTAGGGGATCACAATGG +
Preference number: 2 (lower is better)
Translates to: HSTNDVPNTSNLILRKDSKTHPS*CRGSQW
Trigger: CCATTGTGATCCCCTACAGCAGGAAGGGTGAGTTTT...ACTGTCTTTGCGAAGGATGAGGTTACTTGTGTTGGGCACATCATTGGTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp AAGATGGGCTCTTGGGTGGGATCTAAAGGTTTGAAATCCTCCGGGTaGAATAAAGAAGATGAGGGAGCAATCGTCTGGTCCTTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: KMGSWVGSKGLKSSG*NKEDEGAIVWSFVW
Trigger: CCAAACAAAGGACCAGACGATTGCTCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGAGCCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACAGCACCAATGATGTaGCCAACACAAGTAACCTCA +
Preference number: 2 (lower is better)
Translates to: LENAILLSPHGMCGNLDTTAPMM*PTQVTS
Trigger: TGAGGTTACTTGTGTTGGGCACATCATTGGTGCTGT...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AAGACAGTTTCATCATTGAAAATGCCAGTTATGTTACTACCAGGGACATCCTCTTTCCCACCACCAGCTTaGCATCAGGGTGCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: KTVSSLKMPVMLLPGTSSFPPPA*HQGAGL
Trigger: AAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAA...AGAGGATGTCCCTGGTAGTAACATAACTGGCATTTTCAATGATGAAACTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AGGGACAGTGTTAGTGCTTGTCTCCGTTATATGGATCTTGGAAGTGGGGATTTTGGACTCTCATGCCACTaGTCACCTTGGCAATGTCAT +
Preference number: 2 (lower is better)
Translates to: RDSVSACLRYMDLGSGDFGLSCH*SPWQCH
Trigger: ATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCC...AAAATCCCCACTTCCAAGATCCATATAACGGAGACAAGCACTAACACTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR GCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACCCTTTGTTTGGCTCATaGAGCAGTTTGGGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHPLFGS*SSLGCF
Trigger: GAAACAACCCAAACTGCTGCATGAGCCAAACAAAGG...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTaGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGT +
Preference number: 2 (lower is better)
Translates to: TQNYSKLPLGPAAPR*LIGLFATHDLDHNC
Trigger: ACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 90 bp TGCCCAACACAAGTAACCTCATCCTTCGCAAAGACAGTTTCATCATaGAAAATGCCAGTTATGTTACTACCAGGGACATCCTCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: CPTQVTSSFAKTVSS*KMPVMLLPGTSSEV
Trigger: CACCTCAGAGGATGTCCCTGGTAGTAACATAACTGGCATTTTCAATGATGAAACTGTCTTTGCGAAGGATGAGGTTACTTGTGTTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AAGACAGTTTCATCATTGAAAATGCCAGTTATGTTACTACCAGGGACATCCTCTTCCATGGTTGAAACCTaGATCCAGGTCACACGTTCC +
Preference number: 2 (lower is better)
Translates to: KTVSSLKMPVMLLPGTSSSMVET*IQVTRS
Trigger: GGAACGTGTGACCTGGATCCAGGTTTCAACCATGGA...AGAGGATGTCCCTGGTAGTAACATAACTGGCATTTTCAATGATGAAACTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 90 bp ATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATaGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTCCATTTT +
Preference number: 2 (lower is better)
Translates to: ITQNCHLGQQLPVCL*VCLQLMIWITIVHF
Trigger: AAAATGGACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTAAAATGCCATCCTGCTaGGTCCCCATGGGATGTGTG +
Preference number: 2 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLKMPSC*VPMGCV
Trigger: CACACATCCCATGGGGACTCAGCAGGATGGCATTTT...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAAATTGTCCATTTTCTTaGAAATGCCATCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: KNGLRITQNYSKLPLGPANCPFS*KCHPAE
Trigger: CTCAGCAGGATGGCATTTTCAAGAAAATGGACAATT...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR CCA 90 bp AGGGACAGTGTTAGTGCTTGTCTCCGTTATATGGATCTTGGAAGTGGGGATTTTTTCTTTATAGCATCCTaGATTGTGATAATGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RDSVSACLRYMDLGSGDFFFIAS*IVIMAG
Trigger: TCCAGCCATTATCACAATCCAGGATGCTATAAAGAA...AAAATCCCCACTTCCAAGATCCATATAACGGAGACAAGCACTAACACTGTCCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR TCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTAATTGTCCATTTTCTTaGAAATGCCATCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLNCPFS*KCHPAE
Trigger: CTCAGCAGGATGGCATTTTCAAGAAAATGGACAATT...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR GCA 72 bp AATTCCACCATCCCACCAGGGGCGTCGGGGGCCAGGTaGAGCTCCTCTGCCAAGCCAGCACACACATCCTGC +
Preference number: 3 (lower is better)
Translates to: NSTIPPGASGAR*SSSAKPAHTSC
Trigger: GCAGGATGTGTGTGCTGGCTTGGCAGAGGAGCTGCACCTGGCCCCCGACGCCCCTGGTGGGATGGTGGAATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ACAGTACACAGCCTCCCCGGATGCCTGCATGTCTGCTaGCAGGTGAGGCATGGGCCTGCCCACCATGTCCTC +
Preference number: 3 (lower is better)
Translates to: TVHSLPGCLHVC*QVRHGPAHHVL
Trigger: GAGGACATGGTGGGCAGGCCCATGCCTCACCTGGCAGCAGACATGCAGGCATCCGGGGAGGCTGTGTACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp CCGGAGTGGCGGGGCTGTCTAGCTGGAAGAGCTGTTTaGCGTTACTGTCTCCGTGCTGAGCTCGAGCTGCGC +
Preference number: 3 (lower is better)
Translates to: PEWRGCLAGRAV*RYCLRAELELR
Trigger: GCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp AGCATGGGCCCGCGTGCTGGTGACCAGCCTGAGGGACAGCTCATTCTCATAGCGACGGACTTGACCTGCTaGCCAGCAAACCAGCGCAGC +
Preference number: 3 (lower is better)
Translates to: SMGPRAGDQPEGQLILIATDLTC*PANQRS
Trigger: GCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGT...CGCTATGAGAATGAGCTGTCCCTCAGGCTGGTCACCAGCACGCGGGCCCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ATGCCTGCATGTCTGCTGCCAGGTGAGGCATGGGCCTaGCCACCATGTCCTCCTCAGACTGACCCTTGGGCA +
Preference number: 3 (lower is better)
Translates to: MPACLLPGEAWA*PPCPPQTDPWA
Trigger: TGCCCAAGGGTCAGTCTGAGGAGGACATGGTGGGCAGGCCCATGCCTCACCTGGCAGCAGACATGCAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp GCGGGGAATGTCATCACAGTACACAGCCTCCCCGGATaGCTGCATGTCTGCTGCCAGGTGAGGCATGGGCCT +
Preference number: 3 (lower is better)
Translates to: AGNVITVHSLPG*LHVCCQVRHGP
Trigger: AGGCCCATGCCTCACCTGGCAGCAGACATGCAGGCATCCGGGGAGGCTGTGTACTGTGATGACATTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp CCATCTCGCCTGCCTCGCCTTTCGGCACGGCAATGGTaGAGTGGGTCTCCAGATAGAAGTGCTCCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: PSRLPRLSARQW*SGSPDRSAPGH
Trigger: GTGGCCAGGAGCACTTCTATCTGGAGACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp GCTCCATCTCGCCTGCCTCGCCTTTCGGCACGGCAATaGTGCAGTGGGTCTCCAGATAGAAGTGCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: APSRLPRLSARQ*CSGSPDRSAPG
Trigger: GCCAGGAGCACTTCTATCTGGAGACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp GGTGTTCTGTGTGCTCACGAAGAGCTCCATCTCGCCTaGCTCGCCTTTCGGCACGGCAATGGTGCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: GVLCAHEELHLA*LAFRHGNGAVG
Trigger: ACCCACTGCACCATTGCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGCTCTTCGTGAGCACACAGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp AGCCAGGAAAAGAGGTGGCTCGCCGACAGCCTTGGATaGATAGATGGCCCTCTTGTTGGGGCAGTCGCGGAG +
Preference number: 3 (lower is better)
Translates to: SQEKRWLADSLG*IDGPLVGAVAE
Trigger: CTCCGCGACTGCCCCAACAAGAGGGCCATCTATGCATCCAAGGCTGTCGGCGAGCCACCTCTTTTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp GTATGGTCTGACAGGCTTCATAAATGGCCTGGCCATTaGGGTCAGCGCTGGCAGAGGCAGCCGTGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: VWSDRLHKWPGH*GQRWQRQPWER
Trigger: CCTCTCCCACGGCTGCCTCTGCCAGCGCTGACCTCAATGGCCAGGCCATTTATGAAGCCTGTCAGACCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ACGGACTTGACCTGCTTGCCAGCAAACCAGCGCAGCTaGTCCATCACGCCTCTGAACACCTCTGTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: TDLTCLPANQRS*SITPLNTSVLC
Trigger: GCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGCAGCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ATGATGTTCCCGCCAATGGACGCCACGGACTTGACCTaGTTGCCAGCAAACCAGCGCAGCTGCTCCATCACG +
Preference number: 3 (lower is better)
Translates to: MMFPPMDATDLT*LPANQRSCSIT
Trigger: CGTGATGGAGCAGCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCATTGGCGGGAACATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp TACAGGGCGGCCTGTCTTGTATGCAGCCAAGGCCACTaGTGTGGATATCAGAGTGCTCCGGGTCTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: YRAACLVCSQGH*CGYQSAPGLLP
Trigger: GGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCATACAAGACAGGCCGCCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp CCACTGCTGTGGATATCAGAGTGCTCCGGGTCTCCTTCCCTCCAAAGCCTCCACACCCTTGGGCACCTCTaGGAAAAGCTGGACGTTAGC +
Preference number: 3 (lower is better)
Translates to: PLLWISECSGSPSLQSLHTLGHL*EKLDVS
Trigger: GCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGGT...GTGGAGGCTTTGGAGGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp AGCTGCTCCATCACGCCTCTGAACACCTCTGTCCTCTaGTCTGGAAGTGTAGCAATCGCGTCCGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: SCSITPLNTSVL*SGSVAIASART
Trigger: TGTCCTGGCGGACGCGATTGCTACACTTCCAGAGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp TGTATGCAGCCAAGGCCACTGCTGTGGATATCAGAGTaGTCCGGGTCTCCTTCCCTCCAAAGCCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: CMQPRPLLWISE*SGSPSLQSLHP
Trigger: TGGGTGGAGGCTTTGGAGGGAAGGAGACCCGGAGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ACCCTTGGGCACCTCTTGGAAAAGCTGGACGTTAGCTaGAGGATCCTTCTGAAAGAGCAGGGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: TLGHLLEKLDVS*RILLKEQGGAG
Trigger: GCCAGCGCCACCCTGCTCTTTCAGAAGGATCCTCCAGCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp CAAGCGTTTCGGATCTTCTCCGGAGTGGCGGGGCTGTCTAGCTGGAAGAGCTGTGGCTCATGCAGCAGTTaGGGTTGTTTCCACTTCCTC +
Preference number: 3 (lower is better)
Translates to: QAFRIFSGVAGLSSWKSCGSCSS*GCFHFL
Trigger: GAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCC...ACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCCGAAACGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp GTTACTGTCTCCGTGCTGAGCTCGAGCTGCGCGGATGGCATCTTTGATGGCAAATCAGGGTGCTGGGCTTaGAGGTCAAGCAGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VTVSVLSSSCADGIFDGKSGCWA*RSSSSS
Trigger: GGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGA...TTTGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp GGCTCCAAAGGAGATTCCCTCAGGCCCATGTGCCACTaGGGTCAGTTCAAGGATCCAGGCTGGGCAGATGAT +
Preference number: 3 (lower is better)
Translates to: GSKGDSLRPMCH*GQFKDPGWADD
Trigger: ATCATCTGCCCAGCCTGGATCCTTGAACTGACCTCAGTGGCACATGGGCCTGAGGGAATCTCCTTTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp TCTTGGAAAAGCTGGACGTTAGCTGGAGGATCCTTCTaGAAGAGCAGGGTGGCGCTGGCAAAGGTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: SWKSWTLAGGSF*KSRVALAKVGS
Trigger: GGACCCCACCTTTGCCAGCGCCACCCTGCTCTTTCAGAAGGATCCTCCAGCTAACGTCCAGCTTTTCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp GGCTCCCCTCGGGAGAGTAGTGCAGCTCCTCCATGGTaGAAAGACCAAGACCCTGGACAAATGCCCCTTCTA +
Preference number: 3 (lower is better)
Translates to: GSPRESSAAPPW*KDQDPGQMPLL
Trigger: TAGAAGGGGCATTTGTCCAGGGTCTTGGTCTTTTCACCATGGAGGAGCTGCACTACTCTCCCGAGGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp CCCTCTTGTTGGGGCAGTCGCGGAGCAGGGATACTCTaGACTCAATGGGGATGCTGCCAAATGCAGGGATCT +
Preference number: 3 (lower is better)
Translates to: PSCWGSRGAGIL*TQWGCCQMQGS
Trigger: AGATCCCTGCATTTGGCAGCATCCCCATTGAGTTCAGAGTATCCCTGCTCCGCGACTGCCCCAACAAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp AGCTGGAAGAGCTGTTTGGCGTTACTGTCTCCGTGCTaGGCTCGAGCTGCGCGGATGGCATCTTTGATGGCA +
Preference number: 3 (lower is better)
Translates to: SWKSCLALLSPC*ARAARMASLMA
Trigger: TGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAGCTCTTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ATGGTCCATCCAGACCGTTCTCTTGGTACCTCTAGATaGGAGGGTCAGCTTGGCTCGACTGGCCATGAGCAC +
Preference number: 3 (lower is better)
Translates to: MVHPDRSLGTSR*EGQLGSTGHEH
Trigger: GTGCTCATGGCCAGTCGAGCCAAGCTGACCCTCGCATCTAGAGGTACCAAGAGAACGGTCTGGATGGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp GTCCAGCATGCAACGTACAGGGCGGCCTGTCTTGTATaGAGCCAAGGCCACTGCTGTGGATATCAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: VQHATYRAACLV*SQGHCCGYQSA
Trigger: AGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCATACAAGACAGGCCGCCCTGTACGTTGCATGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp CTCCATCACGCCTCTGAACACCTCTGTCCTCTGCTCTaGAAGTGTAGCAATCGCGTCCGCCAGGACACTTTC +
Preference number: 3 (lower is better)
Translates to: LHHASEHLCPLL*KCSNRVRQDTF
Trigger: GAAAGTGTCCTGGCGGACGCGATTGCTACACTTCCAGAGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp GATCCTTCTGAAAGAGCAGGGTGGCGCTGGCAAAGGTaGGGTCCAGTTTACCACACATACCCTCAAGGTCCG +
Preference number: 3 (lower is better)
Translates to: DPSERAGWRWQR*GPVYHTYPQGP
Trigger: CGGACCTTGAGGGTATGTGTGGTAAACTGGACCCCACCTTTGCCAGCGCCACCCTGCTCTTTCAGAAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp GATTTTCACCCCTCTAGCGGCTCTGTGTGCATGTTCTaGGGTGTCAGCGACCACAGCACCAATGATGTGCCC +
Preference number: 3 (lower is better)
Translates to: DFHPSSGSVCMF*GVSDHSTNDVP
Trigger: GGGCACATCATTGGTGCTGTGGTCGCTGACACCCCAGAACATGCACACAGAGCCGCTAGAGGGGTGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ACTGATCCACACAAGCGTTTCGGATCTTCTCCGGAGTaGCGGGGCTGTCTAGCTGGAAGAGCTGTTTGGCGT +
Preference number: 3 (lower is better)
Translates to: TDPHKRFGSSPE*RGCLAGRAVWR
Trigger: ACGCCAAACAGCTCTTCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCCGAAACGCTTGTGTGGATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp AGCATGGGCCCGCGTGCTGGTGACCAGCCTGAGGGACAGCTCATTCTCATAGCGGTGGGATCTAAAGGTTaGAAATCCTCCGGGTTGAAT +
Preference number: 3 (lower is better)
Translates to: SMGPRAGDQPEGQLILIAVGSKG*KSSGLN
Trigger: ATTCAACCCGGAGGATTTCAAACCTTTAGATCCCAC...CGCTATGAGAATGAGCTGTCCCTCAGGCTGGTCACCAGCACGCGGGCCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp TTCCCACCACCAGCTTGGCATCAGGGTGCTGGGCTTTaGGGTCAAGCAGTTCCTCCATGGTTGAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: FPPPAWHQGAGL*GQAVPPWLKPG
Trigger: TCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp GGACTTGGACAGCTGCTTCGGAGTGGTCTTGAGGGCTaGGACAGTTCTGTCAGCCATCCCTCCAAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: GLGQLLRSGLEG*DSSVSHPSKAK
Trigger: CTTTGCTTTGGAGGGATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp CGAGAGAGATCCTCACTGTTCCCGCCATTGCTGAAGTaGGCCACCTCCAGTGCCACTATAGTCCCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: RERSSLFPPLLK*ATSSATIVPVF
Trigger: GAAGACTGGGACTATAGTGGCACTGGAGGTGGCTCACTTCAGCAATGGCGGGAACAGTGAGGATCTCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp CTGTCAGCCATCCCTCCAAAGCAAAGGGACAGTTCCTaGACTTCAGTGGTCCCTGGCTTGAACAGGACTCTC +
Preference number: 3 (lower is better)
Translates to: LSAIPPKQRDSS*TSVVPGLNRTL
Trigger: GAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTTGGAGGGATGGCTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp TCCTGCAGCAACTCCTCATTCCAGGACTTGGACAGCTaGTTCGGAGTGGTCTTGAGGGCTGAGACAGTTCTG +
Preference number: 3 (lower is better)
Translates to: SCSNSSFQDLDS*FGVVLRAETVL
Trigger: CAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGCTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp AGGTCCGGAATCCCTGGAGGATGGGTCTATAGCCTGTACAGCGGCAGAGGTTTCATGCAGCAGTTTGGGTaGTTTCCACTTCCTCCACAG +
Preference number: 3 (lower is better)
Translates to: RSGIPGGWVYSLYSGRGFMQQFG*FPLPPQ
Trigger: CTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCAT...GAAACCTCTGCCGCTGTACAGGCTATAGACCCATCCTCCAGGGATTCCGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp GAACCATGGCTTTTGGCAATTCTCTCCTGGACAGGATGCAGCTTCTTGGTGTTTTCTCCACAGCCAAGCTaGGTCCCGCACAGCCCCACT +
Preference number: 3 (lower is better)
Translates to: EPWLLAILSWTGCSFLVFSPQPS*VPHSPT
Trigger: AGTGGGGCTGTGCGGGACCAAGCTTGGCTGTGGAGA...AAACACCAAGAAGCTGCATCCTGTCCAGGAGAGAATTGCCAAAAGCCATGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR TCA 72 bp AAAGGGACAGTTCCTGCACTTCAGTGGTCCCTGGCTTaGACAGGACTCTCATGCCACTGGTCACCTTGGCAA +
Preference number: 3 (lower is better)
Translates to: KGTVPALQWSLA*TGLSCHWSPWQ
Trigger: TTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ATCTCTGTGTTTCCCACCACCAGCTTGGCATCAGGGTaGTGGGCTTTGAGGTCAAGCAGTTCCTCCATGGTT +
Preference number: 3 (lower is better)
Translates to: ISVFPTTSLASG*WALRSSSSSMV
Trigger: AACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp CCCTTCTTTGTACATGTTTTTCCTCCGTACCTCCTCTaGAGGCAGCCCACAGGTGACAGCGACCTCACTCAT +
Preference number: 3 (lower is better)
Translates to: PFFVHVFPPYLL*RQPTGDSDLTH
Trigger: ATGAGTGAGGTCGCTGTCACCTGTGGGCTGCCTGCAGAGGAGGTACGGAGGAAAAACATGTACAAAGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp CAGGGATACTCTGAACTCAATGGGGATGCTGCCAAATaGAGGGATCTTGTAGGTACTGGGGCCACGAGTGTG +
Preference number: 3 (lower is better)
Translates to: QGYSELNGDAAK*RDLVGTGATSV
Trigger: CACACTCGTGGCCCCAGTACCTACAAGATCCCTGCATTTGGCAGCATCCCCATTGAGTTCAGAGTATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp CTGTTTGGCGTTACTGTCTCCGTGCTGAGCTCGAGCTaGGCGGATGGCATCTTTGATGGCAAAGAAGATCGA +
Preference number: 3 (lower is better)
Translates to: LFGVTVSVLSSS*ADGIFDGKEDR
Trigger: TCGATCTTCTTTGCCATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCACGGAGACAGTAACGCCAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp GATGGCAAAGAAGATCGAAGAAGCCAGGAAAAGAGGTaGCTCGCCGACAGCCTTGGATGCATAGATGGCCCT +
Preference number: 3 (lower is better)
Translates to: DGKEDRRSQEKR*LADSLGCIDGP
Trigger: AGGGCCATCTATGCATCCAAGGCTGTCGGCGAGCCACCTCTTTTCCTGGCTTCTTCGATCTTCTTTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp GAAGCCCACCTTGTATTTAGCCAGGAAGGGATGTCTGCCACCAGTTATGAGCATATGGACGCCACGGACTaGACCTGCTTGCCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: EAHLVFSQEGMSATSYEHMDATD*TCLPAN
Trigger: GTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCAT...ATGCTCATAACTGGTGGCAGACATCCCTTCCTGGCTAAATACAAGGTGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp TCCCTGTTGAATTTCTCCACTTCCATCTTGCGAGCCTaGTACTGGGAGCTCGCTATGCACTCATCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: SLLNFSTSILRA*YWELAMHSSQH
Trigger: GTGCTGGGATGAGTGCATAGCGAGCTCCCAGTATCAGGCTCGCAAGATGGAAGTGGAGAAATTCAACAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp TTTTCTGGTGTTCCAGTGGCACACAGGGTGGTGAACTaGTCCACACAAGCGTTTCGGATCTTCTCCGGAGTG +
Preference number: 3 (lower is better)
Translates to: FSGVPVAHRVVN*STQAFRIFSGV
Trigger: CACTCCGGAGAAGATCCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTGTGCCACTGGAACACCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp GTCACCTTGGCAATGTCATCTTCTCTCCTGGAGGCCTaGTTGAAGGCTGAGAAAAACTCACCCTTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: VTLAMSSSLLEA*LKAEKNSPFLL
Trigger: CAGCAGGAAGGGTGAGTTTTTCTCAGCCTTCAAGCAGGCCTCCAGGAGAGAAGATGACATTGCCAAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp TTCAGCCTCAGCAACTCTGGGGGAAAGATGGGCTCTTaGGTGGGATCTAAAGGTTTGAAATCCTCCGGGTTG +
Preference number: 3 (lower is better)
Translates to: FSLSNSGGKMGS*VGSKGLKSSGL
Trigger: CAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGAGCCCATCTTTCCCCCAGAGTTGCTGAGGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp AAAGCAAAGGGACAGTTCCTGCACTTCAGTGGTCCCTaGCTTGAACAGGACTCTCATGCCACTGGTCACCTT +
Preference number: 3 (lower is better)
Translates to: KAKGQFLHFSGP*LEQDSHATGHL
Trigger: AAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ACAATACCAGGGGTACAGAACCCACACTGGGAACCATaGCTTTTGGCAATTCTCTCCTGGACAGGATGCAGC +
Preference number: 3 (lower is better)
Translates to: TIPGVQNPHWEP*LLAILSWTGCS
Trigger: GCTGCATCCTGTCCAGGAGAGAATTGCCAAAAGCCATGGTTCCCAGTGTGGGTTCTGTACCCCTGGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR CAA 90 bp AGCATGGGCCCGCGTGCTGGTGACCAGCCTGAGGGACAGCTCATTCTCATAGCGTGCTTATTGGTTTGTTaGCAACTCATGATTTGGATC +
Preference number: 3 (lower is better)
Translates to: SMGPRAGDQPEGQLILIACLLVC*QLMIWI
Trigger: GATCCAAATCATGAGTTGCAAACAAACCAATAAGCA...CGCTATGAGAATGAGCTGTCCCTCAGGCTGGTCACCAGCACGCGGGCCCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATTACTACGGTATGCACTaGACATTCCGAGGAATCAGG +
Preference number: 3 (lower is better)
Translates to: TMSVQLRLQHGPWWLGRYYYGMH*TFRGIR
Trigger: CCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTA...ATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp CACACATCCTGCAGCAACTCCTCATTCCAGGACTTGGACAGCTGCTTCGGAGTGCTCCCCGTTTGCTTATaGGTTTGTTTGCAACTCATG +
Preference number: 3 (lower is better)
Translates to: HTSCSNSSFQDLDSCFGVLPVCL*VCLQLM
Trigger: CATGAGTTGCAAACAAACCAATAAGCAAACGGGGAG...CACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGCTGCAGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTTCAGTGGTCCCTGGCTaGAACAGGACTCTCATGCCA +
Preference number: 3 (lower is better)
Translates to: LENAILLSPHGMCGNLDTSVVPG*NRTLMP
Trigger: TGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGA...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp TGGAATACAGCTCTTTCCATTATACTCCGAGAGAGATCCTCACTGTTCCCGCCATGCTTCGGAGTGGTCTaGAGGGCTGAGACAGTTCTG +
Preference number: 3 (lower is better)
Translates to: WNTALSIILRERSSLFPPCFGVV*RAETVL
Trigger: CAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCA...TGGCGGGAACAGTGAGGATCTCTCTCGGAGTATAATGGAAAGAGCTGTATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp AATGTCATCTTCTCTCCTGGAGGCCTGCTTGAAGGCTaGGAAAAACTCACCCTTCCTGCTGTAGGGGATCAC +
Preference number: 3 (lower is better)
Translates to: NVIFSPGGLLEG*EKLTLPAVGDH
Trigger: GTGATCCCCTACAGCAGGAAGGGTGAGTTTTTCTCAGCCTTCAAGCAGGCCTCCAGGAGAGAAGATGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp TACAGTTTTCTGGTGTTCCAGTGGCACACAGGGTGGTaGACTGATCCACACAAGCGTTTCGGATCTTCTCCG +
Preference number: 3 (lower is better)
Translates to: YSFLVFQWHTGW*TDPHKRFGSSP
Trigger: CGGAGAAGATCCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTGTGCCACTGGAACACCAGAAAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp ATGAGGGAGCAATCGTCTGGTCCTTTGTTTGGCTCATaGAGCAGTTTGGGTTGTTTCCACTTCCTCCACAGC +
Preference number: 3 (lower is better)
Translates to: MREQSSGPLFGS*SSLGCFHFLHS
Trigger: GCTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp TGTTCTGGGGTGTCAGCGACCACAGCACCAATGATGTaGCCAACACAAGTAACCTCATCCTTCGCAAAGACA +
Preference number: 3 (lower is better)
Translates to: CSGVSATTAPMM*PTQVTSSFAKT
Trigger: TGTCTTTGCGAAGGATGAGGTTACTTGTGTTGGGCACATCATTGGTGCTGTGGTCGCTGACACCCCAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTaGCTTGGCAGATATAAGCTCTCTGAAGAAAGCATG +
Preference number: 3 (lower is better)
Translates to: MSVQLRLQHGPW*LGRYKLSEESM
Trigger: CATGCTTTCTTCAGAGAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CCA 72 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTaGTGGCTTGGCAGATATAAGCTCTCTGAAGAAAGC +
Preference number: 3 (lower is better)
Translates to: TMSVQLRLQHGP*WLGRYKLSEES
Trigger: GCTTTCTTCAGAGAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CCA 72 bp GCTTTGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTaGATCCAGGTCACACGTTCCCCTTCAAAACGCAAC +
Preference number: 3 (lower is better)
Translates to: ALRSSSSSMVET*IQVTRSPSKRN
Trigger: GTTGCGTTTTGAAGGGGAACGTGTGACCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATCTCCCCGTTTGCTTATaGGTTTGTTTGCAACTCATG +
Preference number: 3 (lower is better)
Translates to: TMSVQLRLQHGPWWLGRYLPVCL*VCLQLM
Trigger: CATGAGTTGCAAACAAACCAATAAGCAAACGGGGAG...ATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR TCA 72 bp CATGATGCAAGGAGCAGATGGGGGTCAAGCAGGCATTaGCGGAAAAATGAACGATCTTGTTCTGAAGGCGGT +
Preference number: 3 (lower is better)
Translates to: HDARSRWGSSRH*RKNERSCSEGG
Trigger: ACCGCCTTCAGAACAAGATCGTTCATTTTTCCGTCAATGCCTGCTTGACCCCCATCTGCTCCTTGCATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR GCA 72 bp TCTCCTGGACAGGATGCAGCTTCTTGGTGTTTCCTATaGCTTCCACAGTTGTCACAGCAACATGATGCAAGG +
Preference number: 3 (lower is better)
Translates to: SPGQDAASWCFL*LPQLSQQHDAR
Trigger: CCTTGCATCATGTTGCTGTGACAACTGTGGAAGGCATAGGAAACACCAAGAAGCTGCATCCTGTCCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR CCA 72 bp GCTGTAGGGGATCACAATGGACACCAATATCTCCTCTaGACTGAGCAGAGTCCTTCTATAGCCAGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: AVGDHNGHQYLL*TEQSPSIAREE
Trigger: TTCTTCCCTGGCTATAGAAGGACTCTGCTCAGTCCAGAGGAGATATTGGTGTCCATTGTGATCCCCTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp AGGGGATCACAATGGACACCAATATCTCCTCTGGACTaGGCAGAGTCCTTCTATAGCCAGGGAAGAAGGTAT +
Preference number: 3 (lower is better)
Translates to: RGSQWTPISPLD*AESFYSQGRRY
Trigger: ATACCTTCTTCCCTGGCTATAGAAGGACTCTGCTCAGTCCAGAGGAGATATTGGTGTCCATTGTGATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp TCCGGGTTGAATAAAGAAGATGAGGGAGCAATCGTCTaGTCCTTTGTTTGGCTCATGCAGCAGTTTGGGTTG +
Preference number: 3 (lower is better)
Translates to: SGLNKEDEGAIV*SFVWLMQQFGL
Trigger: CAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCCCTCATCTTCTTTATTCAACCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp TTTTCAGATCCTCACGGACCAGGATTTACAGTTTTCTaGTGTTCCAGTGGCACACAGGGTGGTGAACTGATC +
Preference number: 3 (lower is better)
Translates to: FSDPHGPGFTVF*CSSGTQGGELI
Trigger: GATCAGTTCACCACCCTGTGTGCCACTGGAACACCAGAAAACTGTAAATCCTGGTCCGTGAGGATCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp AAAAATGAACGATCTTGTTCTGAAGGCGGTCATACTTaGAGATCATCACGGTGCATGCCCCACAGCCACCTT +
Preference number: 3 (lower is better)
Translates to: KNERSCSEGGHT*RSSRCMPHSHL
Trigger: AAGGTGGCTGTGGGGCATGCACCGTGATGATCTCCAAGTATGACCGCCTTCAGAACAAGATCGTTCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR CCA 72 bp ATACTCATGACAATACCAGGGGTACAGAACCCACACTaGGAACCATGGCTTTTGGCAATTCTCTCCTGGACA +
Preference number: 3 (lower is better)
Translates to: ILMTIPGVQNPH*EPWLLAILSWT
Trigger: TGTCCAGGAGAGAATTGCCAAAAGCCATGGTTCCCAGTGTGGGTTCTGTACCCCTGGTATTGTCATGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR-3UTR CAA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTCAACAGTTCTCCCTGTaGAATTTCTCCACTTCCATC +
Preference number: 3 (lower is better)
Translates to: LENAILLSPHGMCGNLDTQQFSL*NFSTSI
Trigger: GATGGAAGTGGAGAAATTCAACAGGGAGAACTGTTG...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp ACAGTAGGCTCAGGCTTGTTTCGGAGCAGTGTGTACATACTCATGACAATACCACTATGCCTTCCACAGTaGTCACAGCAACATGATGCA +
Preference number: 3 (lower is better)
Translates to: TVGSGLFRSSVYILMTIPLCLPQ*SQQHDA
Trigger: TGCATCATGTTGCTGTGACAACTGTGGAAGGCATAG...TGGTATTGTCATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
3UTR GCA 72 bp ACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTaGTTATTGGTTTGTTTGCAACTCATGATTTGGATC +
Preference number: 3 (lower is better)
Translates to: TQNCHLGQQLPV*LLVCLQLMIWI
Trigger: GATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CCA 72 bp AAAGAAGATGAGGGAGCAATCGTCTGGTCCTTTGTTTaGCTCATGCAGCAGTTTGGGTTGTTTCCACTTCCT +
Preference number: 3 (lower is better)
Translates to: KEDEGAIVWSFV*LMQQFGLFPLP
Trigger: AGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGACGATTGCTCCCTCATCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp GTAACCTCATCCTTCGCAAAGACAGTTTCATCATTGAAAATGCCAGTTATGTTAACTCAAAACTGCCACTaGGGCCAGCAGCTCCCCGTT +
Preference number: 3 (lower is better)
Translates to: VTSSFAKTVSSLKMPVMLTQNCH*GQQLPV
Trigger: AACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGT...TAACATAACTGGCATTTTCAATGATGAAACTGTCTTTGCGAAGGATGAGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR-3UTR CAA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTTTGAAATCCTCCGGGTaGAATAAAGAAGATGAGGGA +
Preference number: 3 (lower is better)
Translates to: LENAILLSPHGMCGNLDTLKSSG*NKEDEG
Trigger: TCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAA...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR TCA 72 bp AGTCAATTTCTACTTCTGAGCAAGCCACCCCATAACTaGAGTAGTGGAAGGGGTTCCCAGAGTTTGTCTCAA +
Preference number: 3 (lower is better)
Translates to: SQFLLLSKPPHN*SSGRGSQSLSQ
Trigger: TTGAGACAAACTCTGGGAACCCCTTCCACTACTTCAGTTATGGGGTGGCTTGCTCAGAAGTAGAAATTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTaGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTT +
Preference number: 3 (lower is better)
Translates to: TQNYPELLKTAT*ASSSPFAYWFV
Trigger: AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR TCA 72 bp GCAACTCATGATTTGGATCACAATTGTCCATTTTCTTaGAAATGCCATCCTGCTGAGTCCCCATGGGATGTG +
Preference number: 3 (lower is better)
Translates to: ATHDLDHNCPFS*KCHPAESPWDV
Trigger: CACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAGAAAATGGACAATTGTGATCCAAATCATGAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CCA 72 bp GTTGTTCTTTATAGCATCCTGGATTGTGATAATGGCTaGAAGGTCTTCATAGGTGATTTTCACCCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: VVLYSILDCDNG*KVFIGDFHPSS
Trigger: GCTAGAGGGGTGAAAATCACCTATGAAGACCTTCCAGCCATTATCACAATCCAGGATGCTATAAAGAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CCA 72 bp ACCCATTCTTTTCACTCGGACTACAATTCTGTTGTCTaGAACACCCAACATCTTTGCAATAAAGCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: THSFHSDYNSVV*NTQHLCNKALG
Trigger: ACCCAGAGCTTTATTGCAAAGATGTTGGGTGTTCCAGACAACAGAATTGTAGTCCGAGTGAAAAGAATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR GCA 72 bp GACTACAATTCTGTTGTCTGGAACACCCAACATCTTTaGAATAAAGCTCTGGGTTTTCATGGTGTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: DYNSVVWNTQHL*NKALGFHGVLC
Trigger: ACACAGAACACCATGAAAACCCAGAGCTTTATTGCAAAGATGTTGGGTGTTCCAGACAACAGAATTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp GCGGTGATGATGTTCCCGCCAATGGACGCCACGGACTaGACCTGCTTGCCAGCAAACCAGCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AVMMFPPMDATD*TCLPANQRSCS
Trigger: GGAGCAGCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCATTGGCGGGAACATCATCACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp AGGGTCAGCTTGGCTCGACTGGCCATGAGCACAGGGTaGAGGTCAGAGATGGGGCTCGCGGTGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: RVSLARLAMSTG*RSEMGLAVMMF
Trigger: GAACATCATCACCGCGAGCCCCATCTCTGACCTCAACCCTGTGCTCATGGCCAGTCGAGCCAAGCTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR GCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCGGTGAGGCATGGGCCTaGCCACCATGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLGEAWA*PPCPPQ
Trigger: CTGAGGAGGACATGGTGGGCAGGCCCATGCCTCACC...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCACAGCCTCCCCGGATaGCTGCATGTCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWHSLPG*LHVCCQ
Trigger: CTGGCAGCAGACATGCAGGCATCCGGGGAGGCTGTG...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGAGATGGCCCTCTTGTTaGGGCAGTCGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWRWPSC*GSRGAG
Trigger: CCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCT...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAAAATGGCCTGGCCATTaGGGTCAGCGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIKWPGH*GQRWQR
Trigger: CCTCTGCCAGCGCTGACCTCAATGGCCAGGCCATTT...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCGGATGCCTGCATGTCTaGTGCCAGGTGAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLGCLHV*CQVRHG
Trigger: CCCATGCCTCACCTGGCAGCAGACATGCAGGCATCC...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTCTGGGGCCACGAGTGTaGAGGCTCCCCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGLGPRV*RLPSGE
Trigger: CTCTCCCGAGGGGAGCCTGCACACTCGTGGCCCCAG...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp TTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTACTGGGGCCACGAGTGTaGAGGCTCCCCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPRITQNCHLGQQLPVCLLGPRV*RLPSGE
Trigger: CTCTCCCGAGGGGAGCCTGCACACTCGTGGCCCCAG...TAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAGGATCTTCTCCGGAGTaGCGGGGCTGTCTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIGSSPE*RGCLAG
Trigger: TCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCC...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGCTCCATCACGCCTCTaGACACCTCTGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLKTMSVQLRLQHGPWWLAPSRL*TPLSSA
Trigger: AGCAGAGGACAGAGGTGTTCAGAGGCGTGATGGAGC...AAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGAGCTCCATCTCGCCTaGCTCGCCTTTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLIELHLA*LAFRHG
Trigger: GCCGTGCCGAAAGGCGAGGCAGGCGAGATGGAGCTC...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGCGTCTCGGTCCAGCATaGAACGTACAGGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVRLGPA*NVQGGL
Trigger: CAGGCCGCCCTGTACGTTGCATGCTGGACCGAGACG...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAACTGGGAGCTCGCTATaGACTCATCCCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQITGSSL*THPSTW
Trigger: CCAGGTGCTGGGATGAGTGCATAGCGAGCTCCCAGT...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp ACCGTTCTCTTGGTACCTCTAGATGCGAGGGTCAGCTaGGCTCGACTGGCCATGAGCACAGGGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TVLLVPLDARVS*ARLAMSTGLRS
Trigger: TGACCTCAACCCTGTGCTCATGGCCAGTCGAGCCAAGCTGACCCTCGCATCTAGAGGTACCAAGAGAACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp GCACACACATCCTGCAGCAACTCCTCATTCCAGGACTaGGACAGCTGCTTCGGAGTGGTCTTGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AHTSCSNSSFQD*DSCFGVVLRAE
Trigger: CTCAGCCCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGAGTTGCTGCAGGATGTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp TCTCGGTCCAGCATGCAACGTACAGGGCGGCCTGTCTaGTATGCAGCCAAGGCCACTGCTGTGGATATCAGA +
Preference number: 4 (lower is better)
Translates to: SRSSMQRTGRPV*YAAKATAVDIR
Trigger: TCTGATATCCACAGCAGTGGCCTTGGCTGCATACAAGACAGGCCGCCCTGTACGTTGCATGCTGGACCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp AGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTATGTCTGCTGCCAGGTaGGGCATGGGCCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: RITQNCHLGQQLPVCLLVMSAAR*GMGLPT
Trigger: GGTGGGCAGGCCCATGCCTCACCTGGCAGCAGACAT...AACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAGTCTGCCACCAGTTATaGGCATGTCCTCGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIVCHQL*ACPRLG
Trigger: ACCGAGACGAGGACATGCTCATAACTGGTGGCAGAC...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATACACAGGGTGGTGAACTaGTCCACACAAGCGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIHRVVN*STQAFR
Trigger: CCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTG...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATGGCGCTGGCAAAGGTaGGGTCCAGTTTACCACACA +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIWRWQR*GPVYHT
Trigger: TGTGTGGTAAACTGGACCCCACCTTTGCCAGCGCCA...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
3UTR CAA 72 bp TTTCCCACCACCAGCTTGGCATCAGGGTGCTGGGCTTaGAGGTCAAGCAGTTCCTCCATGGTTGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: FPTTSLASGCWA*RSSSSSMVETW
Trigger: CCAGGTTTCAACCATGGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp CCAGGGAAGAAGGTATGGTCCATCCAGACCGTTCTCTaGGTACCTCTAGATGCGAGGGTCAGCTTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: PGKKVWSIQTVL*VPLDARVSLAR
Trigger: TCGAGCCAAGCTGACCCTCGCATCTAGAGGTACCAAGAGAACGGTCTGGATGGACCATACCTTCTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp CCTGGCTTGAACAGGACTCTCATGCCACTGGTCACCTaGGCAATGTCATCTTCTCTCCTGGAGGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLNRTLMPLVT*AMSSSLLEACL
Trigger: CAAGCAGGCCTCCAGGAGAGAAGATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp CAAAGGGACAGTTCCTGCACTTCAGTGGTCCCTGGCTaGAACAGGACTCTCATGCCACTGGTCACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QRDSSCTSVVPG*NRTLMPLVTLA
Trigger: TGCCAAGGTGACCAGTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCGGCCTGCTTGAAGGCTaGGAAAAACTCACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLGLLEG*EKLTLP
Trigger: AGGAAGGGTGAGTTTTTCTCAGCCTTCAAGCAGGCC...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTCCGCCATTGCTGAAGTaGGCCACCTCCAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGPPLLK*ATSSAT
Trigger: AGTGGCACTGGAGGTGGCTCACTTCAGCAATGGCGG...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp AGCAATCGCGTCCGCCAGGACACTTTCCACCAAGCTAAGGGGGCAAGCGGCTCCTCTCCACCACCTTTTTaGCATTCACAAAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SNRVRQDTFHQAKGASGSSPPPF*HSQRRP
Trigger: TGGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGA...GGAGCCGCTTGCCCCCTTAGCTTGGTGGAAAGTGTCCTGGCGGACGCGATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR GCA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTTCTCCACTTCCATCTTaGGAGCCTGATACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLKTMSVQLRLQHGPWWLSPLPS*EPDTGS
Trigger: GCTCCCAGTATCAGGCTCGCAAGATGGAAGTGGAGA...AAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATGTGCTGAGCTCGAGCTaGGCGGATGGCATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TMSVQLRLQHGPWWLGRYVLSSS*ADGIFD
Trigger: ATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCAC...ATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTCCACCTGAACCATCTTaGTGTGAAGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: PLKTMSVQLRLQHGPWWLPPEPS*CEGLDP
Trigger: TGGGTCAAGGCCTTCACACCAAGATGGTTCAGGTGG...AAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGCAGTGGTCCCTGGCTTaGACAGGACTCTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTQWSLA*TGLSCH
Trigger: GTGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTG...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp TTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTAATGTCCTCCTCAGACTaGCCCTTGGGCACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRITQNCHLGQQLPVCLMSSSD*PLGTSW
Trigger: CCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACAT...TAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp AGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTAGCACCTGGGCAAGGTaGACCCCTCCAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RITQNCHLGQQLPVCLLVSTWAR*TPPASG
Trigger: ACCAGAAGCTGGAGGGGTTCACCTTGCCCAGGTGCT...AACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCCACCCCATAACTaGAGTAGTGGAAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TMSVQLRLQHGPWWLGRYKPPHN*SSGRGS
Trigger: GGAACCCCTTCCACTACTTCAGTTATGGGGTGGCTT...ATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTGCCACGGACTTGACCTaGTTGCCAGCAAACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LLKTATWASSSPFAYWFVATDLT*LPANQR
Trigger: GCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGTGGC...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCTGCCTGCATGTCTGCTaGCAGGTGAGGCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFCLHVC*QVRHGP
Trigger: AGGCCCATGCCTCACCTGGCAGCAGACATGCAGGCA...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAGGATTTTCAGAGCTCTaGTGGCCACCTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIGFSEL*WPPEPS
Trigger: AGATGGTTCAGGTGGCCAGCAGAGCTCTGAAAATCC...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGAAGACCCTGGACAAATaGCCCTTCTACCTGTCCGAT +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWKTLDK*PFYLSD
Trigger: ATCGGACAGGTAGAAGGGGCATTTGTCCAGGGTCTT...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATAGTACAGAACCCACACTaGGAACCATGGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: DYECAAAVTTRPLVAWQIVQNPH*EPWLLA
Trigger: TGCCAAAAGCCATGGTTCCCAGTGTGGGTTCTGTAC...TATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCCGGCAGAGGTTTCCTTaGAAGGCATTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCRQRFP*KAFSIS
Trigger: GGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCG...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGTTTTCAGAGCTCTGCTaGCCACCTGAACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWFSELC*PPEPSW
Trigger: CCAAGATGGTTCAGGTGGCCAGCAGAGCTCTGAAAA...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp GTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTaGGCAGATATAAGCTCTCTGAAGAAAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: VCSCGYNTALGG*ADISSLKKACR
Trigger: TCTGCATGCTTTCTTCAGAGAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 72 bp GTCTGGTCCTTTGTTTGGCTCATGCAGCAGTTTGGGTaGTTTCCACTTCCTCCACAGCACCCACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: VWSFVWLMQQFG*FPLPPQHPPSL
Trigger: CAAGGATGGTGGGTGCTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCCAAACAAAGGACCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGTCCAGGCTGGGCAGATaGTCAGAGGAAATAGCATAT +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWSRLGR*SEEIAY
Trigger: ATATGCTATTTCCTCTGATCATCTGCCCAGCCTGGA...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACGCTGGAGGATCCTTCTaGAAGAGCAGGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHAGGSF*KSRVAL
Trigger: CAGCGCCACCCTGCTCTTTCAGAAGGATCCTCCAGC...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTAGCACCTGGGCAAGGTaGACCCCTCCAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSSTWAR*TPPASG
Trigger: ACCAGAAGCTGGAGGGGTTCACCTTGCCCAGGTGCT...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTAAATGGCCTGGCCATTaGGGTCAGCGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSKWPGH*GQRWQR
Trigger: CCTCTGCCAGCGCTGACCTCAATGGCCAGGCCATTT...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCGCTCTCCCAGGAGCCTaGGGGATTCTTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCALPGA*GILFLE
Trigger: TTCAAGAAAAAGAATCCCTCAGGCTCCTGGGAGAGC...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTGCAAACCAGCGCAGCTaGTCCATCACGCCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LENAILLSPHGMCGNLDTANQRS*SITPLN
Trigger: GTTCAGAGGCGTGATGGAGCAGCTGCGCTGGTTTGC...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCTCATGGTGTTCTGTGTaGTCACGAAGAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLSWCSV*SRRAPS
Trigger: AGATGGAGCTCTTCGTGAGCACACAGAACACCATGA...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTCCTCATTCCAGGACTTaGACAGCTGCTTCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGPHSRT*TAASEW
Trigger: CCACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGG...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCGCTCGCCGACAGCCTTaGATGCATAGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFARRQP*MHRWPS
Trigger: AGAGGGCCATCTATGCATCCAAGGCTGTCGGCGAGC...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGAGTGGTCTTGAGGGCTaGGACAGTTCTGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTSGLEG*DSSVSH
Trigger: ATGGCTGACAGAACTGTCTCAGCCCTCAAGACCACT...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTCCTCCAGCTTCTGGTTaGAGTGAGTCAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLKTATWASSSPFAYWFVPPASG*SESGPL
Trigger: AAGGGGACCTGACTCACTTCAACCAGAAGCTGGAGG...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCCTCCAGCTTCTGGTTaGAGTGAGTCAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFPPASG*SESGPL
Trigger: AAGGGGACCTGACTCACTTCAACCAGAAGCTGGAGG...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp TTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTAAAGCCACCCCATAACTaGAGTAGTGGAAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPRITQNCHLGQQLPVCLKPPHN*SSGRGS
Trigger: GGAACCCCTTCCACTACTTCAGTTATGGGGTGGCTT...TAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGCGCGGATGGCATCTTTaGTGGCAAAGAAGATCGAAG +
Preference number: 4 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVRGWHL*WQRRSK
Trigger: CTTCGATCTTCTTTGCCATCAAAGATGCCATCCGCG...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTCAAAGGGACAGTTCCTaGACTTCAGTGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LENAILLSPHGMCGNLDTQRDSS*TSVVPG
Trigger: GCCAGGGACCACTGAAGTGCAGGAACTGTCCCTTTG...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGACAGCACCAATGATGTaGCCAACACAAGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWTAPMM*PTQVTS
Trigger: TGAGGTTACTTGTGTTGGGCACATCATTGGTGCTGT...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTCTGTGGATATCAGAGTaGTCCGGGTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRALWISE*SGSPSL
Trigger: GAGGGAAGGAGACCCGGAGCACTCTGATATCCACAG...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCGTGCTGAGCTCGAGCTaGGCGGATGGCATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFVLSSS*ADGIFD
Trigger: ATCAAAGATGCCATCCGCGCAGCTCGAGCTCAGCAC...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGGAATCCCTGGAGGATaGGTCTATAGCCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTGIPGG*VYSLYS
Trigger: GCTGTACAGGCTATAGACCCATCCTCCAGGGATTCC...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp AGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTAGCACCCACCATCCTTaGCAAAGGTCCGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: RITQNCHLGQQLPVCLLVSTHHP*QRSGIP
Trigger: AGGGATTCCGGACCTTTGCCAAGGATGGTGGGTGCT...AACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACTTCCCACCACCAGCTTaGCATCAGGGTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHFPPPA*HQGAGL
Trigger: AAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAA...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTACCAGGGAAGAAGGTATaGTCCATCCAGACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPRITQNCHLGQQLPVCLPGKKV*SIQTVL
Trigger: GAGAACGGTCTGGATGGACCATACCTTCTTCCCTGG...TAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTCTGTGTGCATGTTCTaGGGTGTCAGCGACCACAGC +
Preference number: 4 (lower is better)
Translates to: LLKTATWASSSPFAYWFVSVCMF*GVSDHS
Trigger: GCTGTGGTCGCTGACACCCCAGAACATGCACACAGA...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACGGATCTTGTAGGTACTaGGGCCACGAGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHGSCRY*GHECAG
Trigger: GCCTGCACACTCGTGGCCCCAGTACCTACAAGATCC...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAAGATGGCCCTCTTGTTaGGGCAGTCGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKRWPSC*GSRGAG
Trigger: CCCTGCTCCGCGACTGCCCCAACAAGAGGGCCATCT...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp ATTTCAATGCCTATCTCTGTGTTTCCCACCACCAGCTaGGCATCAGGGTGCTGGGCTTTGAGGTCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ISMPISVFPTTS*ASGCWALRSSS
Trigger: ACTGCTTGACCTCAAAGCCCAGCACCCTGATGCCAAGCTGGTGGTGGGAAACACAGAGATAGGCATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp GGGACAGTGTTAGTGCTTGTCTCCGTTATATGGATCTaGGAAGTGGGGATTTTCAGAGCTCTGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GTVLVLVSVIWI*EVGIFRALLAT
Trigger: GGTGGCCAGCAGAGCTCTGAAAATCCCCACTTCCAAGATCCATATAACGGAGACAAGCACTAACACTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTTGTCACAGCAACATaGTGCAAGGAGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRAVVTAT*CKEQMG
Trigger: CCCCATCTGCTCCTTGCATCATGTTGCTGTGACAAC...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAGGCCCATGTGCCACTaGGGTCAGTTCAAGGATCCA +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHRPMCH*GQFKDP
Trigger: TGGATCCTTGAACTGACCTCAGTGGCACATGGGCCT...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTGGACATCCTCTGAGGTaGGGAAACAAACAAACCCTG +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGGHPLR*GNKQTL
Trigger: CAGGGTTTGTTTGTTTCCTCACCTCAGAGGATGTCC...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCTCTCCACCACCTTTTTaGCATTCACAAAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLSPPPF*HSQRRP
Trigger: TGGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGA...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233621.2
CDS-3UTR GCA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCTCTTGGTGTTTCCTATaGCTTCCACAGTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCSWCFL*LPQLSQ
Trigger: CTGTGACAACTGTGGAAGGCATAGGAAACACCAAGA...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTACTCTCCTGGACAGGATaGAGCTTCTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRITQNCHLGQQLPVCLLSWTG*SFLVFP
Trigger: AGGAAACACCAAGAAGCTGCATCCTGTCCAGGAGAG...TAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGTTGGCAATTCTCTCCTaGACAGGATGCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVLAILS*TGCSFL
Trigger: CAAGAAGCTGCATCCTGTCCAGGAGAGAATTGCCAA...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGGGAACCATGGCTTTTaGCAATTCTCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTGNHGF*QFSPGQ
Trigger: CTGTCCAGGAGAGAATTGCCAAAAGCCATGGTTCCC...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTGTCTGGTCCTTTGTTTaGCTCATGCAGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGVWSFV*LMQQFG
Trigger: CCCAAACTGCTGCATGAGCCAAACAAAGGACCAGAC...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTACTCTGGGGGAAAGATaGGCTCTTGGGTGGGATCTA +
Preference number: 4 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRATLGER*ALGWDL
Trigger: TAGATCCCACCCAAGAGCCCATCTTTCCCCCAGAGT...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTTCCATGGTTGAAACCTaGATCCAGGTCACACGTTCC +
Preference number: 4 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGSMVET*IQVTRS
Trigger: GGAACGTGTGACCTGGATCCAGGTTTCAACCATGGA...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTCTCTGTCCTCTGCTCTaGAAGTGTAGCAATCGCGTC +
Preference number: 4 (lower is better)
Translates to: LLKTATWASSSPFAYWFVLCPLL*KCSNRV
Trigger: GACGCGATTGCTACACTTCCAGAGCAGAGGACAGAG...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCACCCTGGCACCTTCTTaGCTTCTGAAGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFTLAPS*LLKCRW
Trigger: CCATCGACACTTCAGAAGCCAAGAAGGTGCCAGGGT...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTTTTTCAGAGCTCTGCTaGCCACCTGAACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGFSELC*PPEPSW
Trigger: CCAAGATGGTTCAGGTGGCCAGCAGAGCTCTGAAAA...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACGCGGGGCTGTCTAGCTaGAAGAGCTGTTTGGCGTTA +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHAGLSS*KSCLAL
Trigger: TAACGCCAAACAGCTCTTCCAGCTAGACAGCCCCGC...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACCAGTTCCTCCATGGTTaGAACCTGGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHQFLHG*NLDPGH
Trigger: GTGACCTGGATCCAGGTTTCAACCATGGAGGAACTG...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TGTACAGCGGCAGAGGTTTCCTTGGAAGGCATTCTCGATCTCCTCGACAGTAGGTCTCCACCACCTTTTTaGCATTCACAAAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: CTAAEVSLEGILDLLDSRSPPPF*HSQRRP
Trigger: TGGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGA...CCTACTGTCGAGGAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGCTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
CDS-3UTR GCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAACTGGGAGCTCGCTATaGACTCATCCCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKTGSSL*THPSTW
Trigger: CCAGGTGCTGGGATGAGTGCATAGCGAGCTCCCAGT...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTTCTCCACTTCCATCTTaGGAGCCTGATACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSSPLPS*EPDTGS
Trigger: GCTCCCAGTATCAGGCTCGCAAGATGGAAGTGGAGA...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCGGGGATGCTGCCAAATaGAGGGATCTTGTAGGTACT +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFGDAAK*RDLVGT
Trigger: AGTACCTACAAGATCCCTGCATTTGGCAGCATCCCC...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp CTTGAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTCCACACTGGGAACCATaGCTTTTGGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LENAILLSPHGMCGNLDTPHWEP*LLAILS
Trigger: GGAGAGAATTGCCAAAAGCCATGGTTCCCAGTGTGG...AGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCAAGCAGTTCCTCCATaGTTGAAACCTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFQAVPP*LKPGSR
Trigger: CCTGGATCCAGGTTTCAACCATGGAGGAACTGCTTG...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp AGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGCCACTGGTCACCTTaGCAATGTCATCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RITQNCHLGQQLPVCLLVCHWSP*QCHLLS
Trigger: GGAGAGAAGATGACATTGCCAAGGTGACCAGTGGCA...AACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTCCACCTGAACCATCTTaGTGTGAAGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSPPEPS*CEGLDP
Trigger: TGGGTCAAGGCCTTCACACCAAGATGGTTCAGGTGG...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAGCTCGCCGACAGCCTTaGATGCATAGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKARRQP*MHRWPS
Trigger: AGAGGGCCATCTATGCATCCAAGGCTGTCGGCGAGC...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTGGATCTTCTCCGGAGTaGCGGGGCTGTCTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: APRLLIGLFATHDLDHNCGSSPE*RGCLAG
Trigger: TCCAGCTAGACAGCCCCGCCACTCCGGAGAAGATCC...ACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp GGGGGAAAGATGGGCTCTTGGGTGGGATCTAAAGGTTaGAAATCCTCCGGGTTGAATAAAGAAGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGKMGSWVGSKG*KSSGLNKEDEG
Trigger: TCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGAGCCCATCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTGTGTGTACATACTCATaGCAATACCAGGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGVCTYS*QYQGYR
Trigger: TCTGTACCCCTGGTATTGTCATGAGTATGTACACAC...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTTGGAACCAACATCCATaGCGATATCTGTACGGAGAT +
Preference number: 4 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLIWNQHP*RYLYGD
Trigger: ATCTCCGTACAGATATCGTCATGGATGTTGGTTCCA...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGTGGAACCAACATCCATaGCGATATCTGTACGGAGAT +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTWNQHP*RYLYGD
Trigger: ATCTCCGTACAGATATCGTCATGGATGTTGGTTCCA...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAGGAGCAGGGATACTCTaGACTCAATGGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKGAGIL*TQWGCC
Trigger: GCAGCATCCCCATTGAGTTCAGAGTATCCCTGCTCC...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACCGCGGATGGCATCTTTaGTGGCAAAGAAGATCGAAG +
Preference number: 4 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHRGWHL*WQRRSK
Trigger: CTTCGATCTTCTTTGCCATCAAAGATGCCATCCGCG...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCACACAGGGTGGTGAACTaGTCCACACAAGCGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KNGLRITQNYSKLPLGPAHRVVN*STQAFR
Trigger: CCGAAACGCTTGTGTGGATCAGTTCACCACCCTGTG...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp GCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTGATCATCACGGTGCATaGCCCACAGCCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: APRLLIGLFATHDLDHNCDHHGA*PTATFS
Trigger: GGAGAAGGTGGCTGTGGGGCATGCACCGTGATGATC...ACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp ACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTCCTTTGTTTGGCTCATaGAGCAGTTTGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TQNYSKLPLGPAAPRLLIPLFGS*SSLGCF
Trigger: GAAACAACCCAAACTGCTGCATGAGCCAAACAAAGG...AATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTAACACCTCTGTCCTCTaGTCTGGAAGTGTAGCAATC +
Preference number: 4 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRANTSVL*SGSVAI
Trigger: GATTGCTACACTTCCAGAGCAGAGGACAGAGGTGTT...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTAAAACTCACCCTTCCTaGTGTAGGGGATCACAATGG +
Preference number: 4 (lower is better)
Translates to: LLKTATWASSSPFAYWFVKTHPS*CRGSQW
Trigger: CCATTGTGATCCCCTACAGCAGGAAGGGTGAGTTTT...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTGGGGATGCTGCCAAATaGAGGGATCTTGTAGGTACT +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSGDAAK*RDLVGT
Trigger: AGTACCTACAAGATCCCTGCATTTGGCAGCATCCCC...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp CAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGGATCTTGTAGGTACTaGGGCCACGAGTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLPVCLLVCLQLMIWITIGSCRY*GHECAG
Trigger: GCCTGCACACTCGTGGCCCCAGTACCTACAAGATCC...AATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGTCCCTATGCGATTCTaGTTCAGAAAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVVPMRF*FRKESV
Trigger: CACACTTTCTTTTCTGAACCAGAATCGCATAGGGAC...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCATCCTGGAGGCCTGCTTaGAGGCTGAGAAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: KNGLRITQNYSKLPLGPASWRPA*RLRKTH
Trigger: GTGAGTTTTTCTCAGCCTTCAAGCAGGCCTCCAGGA...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp CAGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTAACAGTTCTCCCTGTTaGATTTCTCCACTTCCATCT +
Preference number: 4 (lower is better)
Translates to: QNYSKLPLGPAAPRLLIGNSSPC*ISPLPS
Trigger: AGATGGAAGTGGAGAAATTCAACAGGGAGAACTGTT...ACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp CAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTCAGGACTTGGACAGCTaGTTCGGAGTGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QLPVCLLVCLQLMIWITIQDLDS*FGVVLR
Trigger: CCTCAAGACCACTCCGAAGCAGCTGTCCAAGTCCTG...AATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTCCTCCGTACCTCCTCTaGAGGCAGCCCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLPPYLL*RQPTGD
Trigger: GTCACCTGTGGGCTGCCTGCAGAGGAGGTACGGAGG...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTACTCAATGGGGATGCTaGCAAATGCAGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSTQWGC*QMQGSC
Trigger: ACAAGATCCCTGCATTTGGCAGCATCCCCATTGAGT...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGTTCTCTCTGTCCCTATaGGATTCTGGTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTFSLSL*DSGSEK
Trigger: CTTTTCTGAACCAGAATCGCATAGGGACAGAGAGAA...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTTATGGATCTTGGAAGTaGGGATTTTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRAYGSWK*GFSELC
Trigger: GCAGAGCTCTGAAAATCCCCACTTCCAAGATCCATA...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp CCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTaGTTTGCAACTCATGATTTGGATCACAATTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGPAAPRLLIG*FATHDLDHNCP
Trigger: TGGACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 72 bp GACTCAGAATTACCCAGAATTACTCAAAACTGCCACTaGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: DSELPRITQNCH*GQQLPVCLLVC
Trigger: ACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 72 bp TCTTGGGTGGGATCTAAAGGTTTGAAATCCTCCGGGTaGAATAAAGAAGATGAGGGAGCAATCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SWVGSKGLKSSG*NKEDEGAIVWS
Trigger: GGACCAGACGATTGCTCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAAACCTTTAGATCCCACCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
3UTR CAA 72 bp AAGGCATTCTCGATCTCCTCGACAGTAGGCTCAGGCTaGTTTCGGAGCAGTGTGTACATACTCATGACAATA +
Preference number: 4 (lower is better)
Translates to: KAFSISSTVGSG*FRSSVYILMTI
Trigger: TATTGTCATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGTCGAGGAGATCGAGAATGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
CDS-3UTR TCA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTGTCAATTTCTACTTCTaGGCAAGCCACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: EIWILRYALDIPRNQGCSVNFYF*ASHPIT
Trigger: AGTTATGGGGTGGCTTGCTCAGAAGTAGAAATTGAC...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAAAGACCCTGGACAAATaGCCCTTCTACCTGTCCGAT +
Preference number: 4 (lower is better)
Translates to: KNGLRITQNYSKLPLGPAKTLDK*PFYLSD
Trigger: ATCGGACAGGTAGAAGGGGCATTTGTCCAGGGTCTT...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAGGACTCTCATGCCACTaGTCACCTTGGCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKGLSCH*SPWQCH
Trigger: ATGACATTGCCAAGGTGACCAGTGGCATGAGAGTCC...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGATTGTGATAATGGCTaGAAGGTCTTCATAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTDCDNG*KVFIGD
Trigger: ATCACCTATGAAGACCTTCCAGCCATTATCACAATC...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGTTCTTTATAGCATCCTaGATTGTGATAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVFFIAS*IVIMAG
Trigger: TCCAGCCATTATCACAATCCAGGATGCTATAAAGAA...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGAGCTGTAACCAAGGTTaGGTGTCTTATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTSCNQG*VSYKIQ
Trigger: CTGGATTTTATAAGACACCCAACCTTGGTTACAGCT...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp AACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATaGGTTTGTTTGCAACTCATGATTTGGATCACAATT +
Preference number: 4 (lower is better)
Translates to: NCHLGQQLPVCL*VCLQLMIWITI
Trigger: AATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
3UTR CAA 72 bp TACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTaGCTTATTGGTTTGTTTGCAACTCATGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: YSKLPLGPAAPR*LIGLFATHDLD
Trigger: ATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
CDS-3UTR GCA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGCCAGCACACACATCCTaGAGCAACTCCTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: CDQKWTQNYPELLKTATWPAHTS*SNSSFQ
Trigger: CTGGAATGAGGAGTTGCTGCAGGATGTGTGTGCTGG...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTAACACCCAACATCTTTaGAATAAAGCTCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGNTQHL*NKALGF
Trigger: AAAACCCAGAGCTTTATTGCAAAGATGTTGGGTGTT...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGTGCAGCCAAGGCCACTaGTGTGGATATCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CDQKWTQNYPELLKTATWCSQGH*CGYQSA
Trigger: AGCACTCTGATATCCACAGCAGTGGCCTTGGCTGCA...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR GCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAACTCAATGGGGATGCTaGCAAATGCAGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKTQWGC*QMQGSC
Trigger: ACAAGATCCCTGCATTTGGCAGCATCCCCATTGAGT...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCACAGGATGCAGCTTCTTaGTGTTTCCTATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KNGLRITQNYSKLPLGPAQDAAS*CFLCLP
Trigger: TGGAAGGCATAGGAAACACCAAGAAGCTGCATCCTG...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTTCTGAAAGAGCAGGGTaGCGCTGGCAAAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLSERAG*RWQRWG
Trigger: ACCCCACCTTTGCCAGCGCCACCCTGCTCTTTCAGA...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAAAAAGACCAAGACCCTaGACAAATGCCCCTTCTACC +
Preference number: 4 (lower is better)
Translates to: WILRYALDIPRNQGCSIKKRPRP*TNAPST
Trigger: GGTAGAAGGGGCATTTGTCCAGGGTCTTGGTCTTTT...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp CAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTACCAGGGACATCCTCTaGGGTGAGGAAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: QLPVCLLVCLQLMIWITITRDIL*GEETNK
Trigger: TTTGTTTGTTTCCTCACCTCAGAGGATGTCCCTGGT...AATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR TCA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCTCTCCCAGGAGCCTaGGGGATTCTTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CDQKWTQNYPELLKTATWALPGA*GILFLE
Trigger: TTCAAGAAAAAGAATCCCTCAGGCTCCTGGGAGAGC...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGAGCAGGGATACTCTaGACTCAATGGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLGAGIL*TQWGCC
Trigger: GCAGCATCCCCATTGAGTTCAGAGTATCCCTGCTCC...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCATATGGATCTTGGAAGTaGGGATTTTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KNGLRITQNYSKLPLGPAYGSWK*GFSELC
Trigger: GCAGAGCTCTGAAAATCCCCACTTCCAAGATCCATA...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGCGGGGCTGTCTAGCTaGAAGAGCTGTTTGGCGTTA +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLAGLSS*KSCLAL
Trigger: TAACGCCAAACAGCTCTTCCAGCTAGACAGCCCCGC...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
3UTR CAA 72 bp TTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTaGCAACTCATGATTTGGATCACAATTGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LGQQLPVCLLVC*QLMIWITIVHF
Trigger: AAAATGGACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
ENSMUST00000233621.2
CDS-3UTR CCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTCCCTTGGGCACCTCTTaGAAAAGCTGGACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLPLGTS*KSWTLA
Trigger: AGCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGG...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
3UTR CAA 72 bp TCCTGGCCACCAATATATAATTCTCCTGAGACAACATaGTCAGCTTCAGAAAAGCCTTTCTTGAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SWPPIYNSPETT*SASEKPFLRSP
Trigger: AGGAGATCTCAAGAAAGGCTTTTCTGAAGCTGACAATGTTGTCTCAGGAGAATTATATATTGGTGGCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233621.2
CDS-3UTR TCA 90 bp GCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTAACAGTTCTCCCTGTTaGATTTCTCCACTTCCATCT +
Preference number: 4 (lower is better)
Translates to: APRLLIGLFATHDLDHNCNSSPC*ISPLPS
Trigger: AGATGGAAGTGGAGAAATTCAACAGGGAGAACTGTT...ACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR GCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGATTTTCAGAGCTCTaGTGGCCACCTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLGFSEL*WPPEPS
Trigger: AGATGGTTCAGGTGGCCAGCAGAGCTCTGAAAATCC...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGTGTAGGGGATCACAATaGACACCAATATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CDQKWTQNYPELLKTATWCRGSQ*TPISPL
Trigger: CAGAGGAGATATTGGTGTCCATTGTGATCCCCTACA...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTTTCAAGGATCCAGGCTaGGCAGATGATCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLFKDPG*ADDQRK
Trigger: TTTCCTCTGATCATCTGCCCAGCCTGGATCCTTGAA...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CCA 90 bp GCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTGTAGCTGTAACCAAGGTTaGGTGTCTTATAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: APRLLIGLFATHDLDHNCSCNQG*VSYKIQ
Trigger: CTGGATTTTATAAGACACCCAACCTTGGTTACAGCT...ACAATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR TCA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGTCAATTTCTACTTCTaGGCAAGCCACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLVNFYF*ASHPIT
Trigger: AGTTATGGGGTGGCTTGCTCAGAAGTAGAAATTGAC...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CCA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGTTTGCAATAAAGCTCTaGGTTTTCATGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CDQKWTQNYPELLKTATWFAIKL*VFMVFC
Trigger: ACAGAACACCATGAAAACCCAGAGCTTTATTGCAAA...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS CCA 90 bp CACAGCACCCACCATCCTTGGCAAAGGTCCGGAATCCCTGGAGGATaGGTCTATAGCCTGTACAGCGGCAGAGGTTTCCTTGGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: HSTHHPWQRSGIPGG*VYSLYSGRGFLGRH
Trigger: ATGCCTTCCAAGGAAACCTCTGCCGCTGTACAGGCTATAGACCCATCCTCCAGGGATTCCGGACCTTTGCCAAGGATGGTGGGTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCCATGAGCACAGGGTaGAGGTCAGAGATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVAMSTG*RSEMGL
Trigger: GAGCCCCATCTCTGACCTCAACCCTGTGCTCATGGC...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp AGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATAAGCTCTCAGTGGTCCCTGGCTaGAACAGGACTCTCATGCCA +
Preference number: 5 (lower is better)
Translates to: SVQLRLQHGPWWLGRYKLSVVPG*NRTLMP
Trigger: TGGCATGAGAGTCCTGTTCAAGCCAGGGACCACTGA...GAGCTTATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTCTTGGTGTGAAGGCCTaGACCCATCTCAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: PLKTMSVQLRLQHGPWWLLGVKA*THLSTS
Trigger: GGAGGTACTGAGATGGGTCAAGGCCTTCACACCAAG...AAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCGCGGCAGAGGTTTCCTaGGAAGGCATTCTCGATCTC +
Preference number: 5 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCAAEVS*EGILDL
Trigger: GAGATCGAGAATGCCTTCCAAGGAAACCTCTGCCGC...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTACGGACTTGACCTGCTaGCCAGCAAACCAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGTDLTC*PANQRS
Trigger: GCTGCGCTGGTTTGCTGGCAAGCAGGTCAAGTCCGT...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCTCCTCATTCCAGGACTaGGACAGCTGCTTCGGAGTG +
Preference number: 5 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCSSFQD*DSCFGV
Trigger: CACTCCGAAGCAGCTGTCCAAGTCCTGGAATGAGGA...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGGACGCCACGGACTaGACCTGCTTGCCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGMDATD*TCLPAN
Trigger: GTTTGCTGGCAAGCAGGTCAAGTCCGTGGCGTCCAT...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGATGCCACTGGTCACCTaGGCAATGTCATCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWMPLVT*AMSSSL
Trigger: GAGAGAAGATGACATTGCCAAGGTGACCAGTGGCAT...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp GTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTTCAGGGTGCTGGGCTTaGAGGTCAAGCAGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VWKSGYYGMHLTFRGIRASGCWA*RSSSSS
Trigger: GGAGGAACTGCTTGACCTCAAAGCCCAGCACCCTGA...AGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGACCCTTGGGCACCTCTaGGAAAAGCTGGACGTTAGC +
Preference number: 5 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTTLGHL*EKLDVS
Trigger: GCTAACGTCCAGCTTTTCCAAGAGGTGCCCAAGGGT...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGGTCAGGTCCCCTTCTTaGTACATGTTTTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWVRSPS*YMFFLR
Trigger: ACGGAGGAAAAACATGTACAAAGAAGGGGACCTGAC...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGACAGGATGCAGCTTCTaGGTGTTTCCTATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVTGCSF*VFPMPS
Trigger: GGAAGGCATAGGAAACACCAAGAAGCTGCATCCTGT...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGATGCAGCAGTTTGGGTaGTTTCCACTTCCTCCACAG +
Preference number: 5 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVMQQFG*FPLPPQ
Trigger: CTGTGGAGGAAGTGGAAACAACCCAAACTGCTGCAT...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp GAAAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGCTCCTGGAGGCCTGCTaGAAGGCTGAGAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: ENAILLSPHGMCGNLDTTLLEAC*KAEKNS
Trigger: TGAGTTTTTCTCAGCCTTCAAGCAGGCCTCCAGGAG...CGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCTGCTTCGGAGTGGTCTaGAGGGCTGAGACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFCFGVV*RAETVL
Trigger: CAGAACTGTCTCAGCCCTCAAGACCACTCCGAAGCA...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp CCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTTCTCCTGAGACAACATaGTCAGCTTCAGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PLKTMSVQLRLQHGPWWLSPETT*SASEKP
Trigger: AGGCTTTTCTGAAGCTGACAATGTTGTCTCAGGAGA...AAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp ACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGCAGATATGTCAGGTCCCCTTCTTaGTACATGTTTTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: TMSVQLRLQHGPWWLGRYVRSPS*YMFFLR
Trigger: ACGGAGGAAAAACATGTACAAAGAAGGGGACCTGAC...ATATCTGCCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp GCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCCAACAGTTCTCCCTGTaGAATTTCTCCACTTCCATC +
Preference number: 5 (lower is better)
Translates to: AILLSPHGMCGNLDTTVCQQFSL*NFSTSI
Trigger: GATGGAAGTGGAGAAATTCAACAGGGAGAACTGTTG...GCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp TATTCCACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGAGGGGTTCCCAGAGTTaGTCTCAAAGCTGTAACCAA +
Preference number: 5 (lower is better)
Translates to: YSTEDYECAAAVTTRPLVRGSQS*SQSCNQ
Trigger: TTGGTTACAGCTTTGAGACAAACTCTGGGAACCCCT...CACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp CTCCTCGACAGTAGGCTCAGGCTTGTTTCGGAGCAGTGTGTACATACTCATGACTTCTCCACCACCTTTTaGCCATTCACAAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: LLDSRLRLVSEQCVHTHDFSTTF*PFTKKT
Trigger: GGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGAA...GTCATGAGTATGTACACACTGCTCCGAAACAAGCCTGAGCCTACTGTCGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232783.2
CDS-3UTR CAA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGTCTCCACAGCCAAGCTaGGTCCCGCACAGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: CDQKWTQNYPELLKTATWSPQPS*VPHSPN
Trigger: GTTGGGGCTGTGCGGGACCAAGCTTGGCTGTGGAGA...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp ACTGAAGACTATGAGTGTGCAGCTGCGGTTACAACACGGCCCTTGGTGGCTTGGTCAGAAAAGCCTTTCTaGAGATCTCCTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: TEDYECAAAVTTRPLVAWSEKPF*RSPFSI
Trigger: AATCGAGAAAGGAGATCTCAAGAAAGGCTTTTCTGA...CCAAGCCACCAAGGGCCGTGTTGTAACCGCAGCTGCACACTCATAGTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp AGAATTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTGCGCGGATGGCATCTTaGATGGCAAAGAAGATCGAA +
Preference number: 5 (lower is better)
Translates to: RITQNCHLGQQLPVCLLVARMAS*MAKKIE
Trigger: TTCGATCTTCTTTGCCATCAAAGATGCCATCCGCGC...AACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTGCGCGGATGGCATCTTaGATGGCAAAGAAGATCGAA +
Preference number: 5 (lower is better)
Translates to: LLKTATWASSSPFAYWFVARMAS*MAKKIE
Trigger: TTCGATCTTCTTTGCCATCAAAGATGCCATCCGCGC...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp AAATGCCATCCTGCTGAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTGAGGGATTCTTTTTCTaGAAGGGCTCCAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KCHPAESPWDVWKSGYYGEGFFF*KGSSLF
Trigger: GAAAAGACTGGAGCCCTTCAAGAAAAAGAATCCCTC...ACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTCAGCAGGATGGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCTTCTCCACCACCTTTTaGCCATTCACAAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFFSTTF*PFTKKT
Trigger: GGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGAA...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233621.2
CDS-3UTR CAA 90 bp GAAATCTGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTCTATGCCTTCCACAGTaGTCACAGCAACATGATGCA +
Preference number: 5 (lower is better)
Translates to: EIWILRYALDIPRNQGCSLCLPQ*SQQHDA
Trigger: TGCATCATGTTGCTGTGACAACTGTGGAAGGCATAG...ACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp AAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGCCAGCAACAGTAGGCTCAGGCTaGTTTCGGAGCAGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: KNGLRITQNYSKLPLGPATVGSG*FRSSVY
Trigger: GTACACACTGCTCCGAAACAAGCCTGAGCCTACTGT...TGCTGGCCCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp TTACTCAAAACTGCCACTTGGGCCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTCAACAGTTCTCCCTGTaGAATTTCTCCACTTCCATC +
Preference number: 5 (lower is better)
Translates to: LLKTATWASSSPFAYWFVQQFSL*NFSTSI
Trigger: GATGGAAGTGGAGAAATTCAACAGGGAGAACTGTTG...AACAAACCAATAAGCAAACGGGGAGCTGCTGGCCCAAGTGGCAGTTTTGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS-3UTR CAA 90 bp CCAGCAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAGGGGTTCCCAGAGTTaGTCTCAAAGCTGTAACCAA +
Preference number: 5 (lower is better)
Translates to: PAAPRLLIGLFATHDLDHRGSQS*SQSCNQ
Trigger: TTGGTTACAGCTTTGAGACAAACTCTGGGAACCCCT...GTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS GCA 90 bp CCAGAAGTGTTGTTTCAGGGTCTGCATTTTTCTCCACCACCTTTTTaGCATTCACAAAGAAGACCAACTCATCTACCGTTGTCCTCGTCA +
Preference number: 5 (lower is better)
Translates to: PEVLFQGLHFSPPPF*HSQRRPTHLPLSSS
Trigger: TGACGAGGACAACGGTAGATGAGTTGGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGAAAAATGCAGACCCTGAAACAACACTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233621.2
CDS-3UTR CAA 90 bp GAGTCCCCATGGGATGTGTGGAAATCTGGATACTACGGTATGCACTTGACATTCTTGAAATCCTCCGGGTaGAATAAAGAAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: ESPWDVWKSGYYGMHLTFLKSSG*NKEDEG
Trigger: TCCCTCATCTTCTTTATTCAACCCGGAGGATTTCAA...GAATGTCAAGTGCATACCGTAGTATCCAGATTTCCACACATCCCATGGGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp TGGATACTACGGTATGCACTTGACATTCCGAGGAATCAGGGCTGTAGTATAAAAGTGGGATCTAAAGGTTaGAAATCCTCCGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: WILRYALDIPRNQGCSIKVGSKG*KSSGLN
Trigger: ATTCAACCCGGAGGATTTCAAACCTTTAGATCCCAC...TTTTATACTACAGCCCTGATTCCTCGGAATGTCAAGTGCATACCGTAGTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp CAGCTCCCCGTTTGCTTATTGGTTTGTTTGCAACTCATGATTTGGATCACAATTTTCTCCACCACCTTTTaGCCATTCACAAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: QLPVCLLVCLQLMIWITIFSTTF*PFTKKT
Trigger: GGTCTTCTTTGTGAATGGCAAAAAGGTGGTGGAGAA...AATTGTGATCCAAATCATGAGTTGCAAACAAACCAATAAGCAAACGGGGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233621.2
CDS-3UTR CAA 90 bp TATGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGCTCATGCAGCAGTTaGGGTTGTTTCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: YVIKNGLRITQNYSKLPLGSCSS*GCFHFL
Trigger: GAGGAAGTGGAAACAACCCAAACTGCTGCATGAGCC...AAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS-3UTR CAA 90 bp TGTGATCAAAAATGGACTCAGAATTACCCAGAATTACTCAAAACTGCCACTTGGGAGGGATTCTTTTTCTaGAAGGGCTCCAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: CDQKWTQNYPELLKTATWEGFFF*KGSSLF
Trigger: GAAAAGACTGGAGCCCTTCAAGAAAAAGAATCCCTC...CCAAGTGGCAGTTTTGAGTAATTCTGGGTAATTCTGAGTCCATTTTTGATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000024866.6
ENSMUST00000233392.2
CDS CCA 72 bp CACCATCCTTGGCAAAGGTCCGGAATCCCTGGAGGATaGGTCTATAGCCTGTACAGCGGCAGAGGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: HHPWQRSGIPGG*VYSLYSGRGFL
Trigger: AAGGAAACCTCTGCCGCTGTACAGGCTATAGACCCATCCTCCAGGGATTCCGGACCTTTGCCAAGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024866.6
CDS CCA 72 bp GTCACTTCTCCACTTCTCTCTGTCCCTATGCGATTCTaGTTCAGAAAAGAAAGTGTGAAGCTTATTCCAAAC +
Preference number: 6 (lower is better)
Translates to: VTSPLLSVPMRF*FRKESVKLIPN
Trigger: GTTTGGAATAAGCTTCACACTTTCTTTTCTGAACCAGAATCGCATAGGGACAGAGAGAAGTGGAGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233392.2