Pregenerated sensors for XCR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060509Ensembl transcript IDs: ENSMUST00000182350.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGAATCCACGGGACCTGGCTCTGCGAAAGGGAATGTGGTGCATaGGGAGAATTTAGCTCTGGAGAATGGTTAAGAGGGGAATGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: GRIHGTWLCERECGA*GEFSSGEWLRGECW Trigger: CCAGCATTCCCCTCTTAACCATTCTCCAGAGCTAAATTCTCCTCATGCACCACATTCCCTTTCGCAGAGCCAGGTCCCGTGGATTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 90 bp | CTGCTGTACATGGTGTCAGATCTAAGATGGCTCCCGGGACACCAGTaGGACAGCAAAAAGGAACTAAGGTCAAGACAGTGGCTGCTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: LLYMVSDLRWLPGHQ*DSKKELRSRQWLLL Trigger: CAGAAGCAGCCACTGTCTTGACCTTAGTTCCTTTTTGCTGTCTCACTGGTGTCCCGGGAGCCATCTTAGATCTGACACCATGTACAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 90 bp | AGTGTGAGGCATGTGGAAGACAACCTTGTGAAGGAATATGTGGGGTaGAGAGCACTGTGCCACAGAGTCCTGATCTGCTGTACATGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: SVRHVEDNLVKEYVG*RALCHRVLICCTWC Trigger: ACACCATGTACAGCAGATCAGGACTCTGTGGCACAGTGCTCTCCACCCCACATATTCCTTCACAAGGTTGTCTTCCACATGCCTCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 90 bp | AGAACTACCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTaGGTTGCAAAGCACCCTGAAGCCTGGTGCAATAGAACACTGCAT | + |
|
Preference number: 1 (lower is better) Translates to: RTTMLSFLSPVFACC*VAKHPEAWCNRTLH Trigger: ATGCAGTGTTCTATTGCACCAGGCTTCAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGGTAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 90 bp | ATAAAGATGAAGTCAAGGGTATGTGCTCATAAGCTGGAGAGATGTTaGGAAGGCAGAATCCACGGGACCTGGCTCTGCGAAAGGGAATGT | + |
|
Preference number: 1 (lower is better) Translates to: IKMKSRVCAHKLERC*EGRIHGTWLCEREC Trigger: ACATTCCCTTTCGCAGAGCCAGGTCCCGTGGATTCTGCCTTCCCAACATCTCTCCAGCTTATGAGCACATACCCTTGACTTCATCTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 90 bp | AGCTTTATTTACCAGGAGTTGTCACGTGACTCTGTCGCCTCTAAATaGCCATCCTCAGTCCTGTTCCCACAAAAGGGATTTCAAACACCC | + |
|
Preference number: 1 (lower is better) Translates to: SFIYQELSRDSVASK*PSSVLFPQKGFQTP Trigger: GGGTGTTTGAAATCCCTTTTGTGGGAACAGGACTGAGGATGGGCATTTAGAGGCGACAGAGTCACGTGACAACTCCTGGTAAATAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 90 bp | ATGTTCATCTTCGTGTACAAAGGAAAGGAGGCCAGAAGAGGGCAATaGATTCCCTTGGAACTGCAGTTAAAATGGTTGGGAGATACCATG | + |
|
Preference number: 1 (lower is better) Translates to: MFIFVYKGKEARRGQ*IPLELQLKWLGDTM Trigger: CATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCCTCTTCTGGCCTCCTTTCCTTTGTACACGAAGATGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 90 bp | ATCAGTCACAGCTTTTATTGGGATATGGTGAGATGTAGTAAGTTATaGTTGGCCAAGGATTTAGGGGCTTGGGATTGGCTCAAATACTGT | + |
|
Preference number: 1 (lower is better) Translates to: ISHSFYWDMVRCSKL*LAKDLGAWDWLKYC Trigger: ACAGTATTTGAGCCAATCCCAAGCCCCTAAATCCTTGGCCAAGCATAACTTACTACATCTCACCATATCCCAATAAAAGCTGTGACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 90 bp | GTGGACTTTTCTTATCTGGACCTTCTTGGATGGATTGGTGTCAACTaGAAGTTAGCAGCAATATCCTATTCATCTTTGTATTGTCCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: VDFSYLDLLGWIGVN*KLAAISYSSLYCPN Trigger: ATTTGGACAATACAAAGATGAATAGGATATTGCTGCTAACTTTCAGTTGACACCAATCCATCCAAGAAGGTCCAGATAAGAAAAGTCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCACGGGACCTGGCTCTaGGAAAGGGAATGTGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: PCLASSVPCLLVAELQSTHGTWL*ERECGA Trigger: TGCACCACATTCCCTTTCGCAGAGCCAGGTCCCGTG...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGACTTAGCTAATAGTGGCATCTGCCAGACTTCAGCATTCCAGGTTCTCAGGGCCAGAAGAGGGCAATaGATTCCCTTGGAACTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QDLANSGICQTSAFQVLRARRGQ*IPLELQ Trigger: CTGCAGTTCCAAGGGAATCCATTGCCCTCTTCTGGC...CCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 90 bp | CCCTTGGAACTGCAGTTAAAATGGTTGGGAGATACCATGTGGGCTTaGGGAACTGAATTTAGGCCCTCTGGAGGAGTAGCCAGTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PLELQLKWLGDTMWA*GTEFRPSGGVASAL Trigger: AAGAGCACTGGCTACTCCTCCAGAGGGCCTAAATTCAGTTCCCAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 90 bp | CTACCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTaGCAAAGCACCCTGAAGCCTGGTGCAATAGAACACTGCATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPCLASSVPCLLVAE*QSTLKPGAIEHCIP Trigger: TGGAATGCAGTGTTCTATTGCACCAGGCTTCAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCTCAAACTCAGAAATCTaGCTGTCTCTGCCTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PCLASSVPCLLVAELQSTSNSEI*LSLPPE Trigger: CTCAGGAGGCAGAGACAGGCAGATTTCTGAGTTTGA...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGGGTGCAATAGAACACTaGATTCCAAGTCCAGTATGG | + |
|
Preference number: 2 (lower is better) Translates to: CLASSVPCLLVAELQSTLGAIEH*IPSPVW Trigger: CCATACTGGACTTGGAATGCAGTGTTCTATTGCACC...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGTTTAGCTCTGGAGAATaGTTAAGAGGGGAATGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLASSVPCLLVAELQSTLFSSGE*LRGECW Trigger: CCAGCATTCCCCTCTTAACCATTCTCCAGAGCTAAA...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 90 bp | TTCGTGTACAAAGGAAAGGAGGCCAGAAGAGGGCAATGGATTCCCTaGGAACTGCAGTTAAAATGGTTGGGAGATACCATGTGGGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FVYKGKEARRGQWIP*ELQLKWLGDTMWAL Trigger: CAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCCTCTTCTGGCCTCCTTTCCTTTGTACACGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | CACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTCACGTGACTCTAGTGTTGCTTTGGCTTaGCCAGCTGGAAGCCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: HTDTDLWSFIYQELSRDSSVALA*PAGSHF Trigger: GAAGTGGCTTCCAGCTGGGCAAGCCAAAGCAACACT...AGAGTCACGTGACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCATTACCAGGGAAATCTaGGCCCTCTTTTGTGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: PCLASSVPCLLVAELQSTITREI*ALFCVT Trigger: AGTAACACAAAAGAGGGCCCAGATTTCCCTGGTAAT...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGGAACTGCAGTTAAAATaGTTGGGAGATACCATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLASSVPCLLVAELQSTLELQLK*LGDTMW Trigger: CCACATGGTATCTCCCAACCATTTTAACTGCAGTTC...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 90 bp | CTAAGTAAGAGAATAAATGATGAACTGAGTGCACGAAGTGTTGCTTaGGCTTGCCCAGCTGGAAGCCACTTCCCCATGGGTATCATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSKRINDELSARSVA*ACPAGSHFPMGIMS Trigger: AGACATGATACCCATGGGGAAGTGGCTTCCAGCTGGGCAAGCCAAAGCAACACTTCGTGCACTCAGTTCATCATTTATTCTCTTACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCTATGTGGTCCAACATTaGCCAAAATATTGTGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: PCLASSVPCLLVAELQSTYVVQH*PKYCAV Trigger: TACTGCACAATATTTTGGTCAATGTTGGACCACATA...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGATTCCAAGTCCAGTATaGATGAACATGCTAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CLASSVPCLLVAELQSTLIPSPV*MNMLKT Trigger: TGTCTTTAGCATGTTCATCCATACTGGACTTGGAAT...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTAGGGAATGTGGTGCATaGGGAGAATTTAGCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: MQICTLILISGALFTRSCRECGA*GEFSSG Trigger: TCCAGAGCTAAATTCTCCTCATGCACCACATTCCCT...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATCCTGTCTCTGCCTCCTaGGTGCTGGGATTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KLRSQINLQRRGRQVSSNPVSAS*VLGLKA Trigger: TGCCTTTAATCCCAGCACTCAGGAGGCAGAGACAGG...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTATACCATGTGGGCTTTaGGAACTGAATTTAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: MQICTLILISGALFTRSCIPCGL*ELNLGP Trigger: AGGGCCTAAATTCAGTTCCCAAAGCCCACATGGTAT...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGATACTATGGAACAGAGGGCACTATAAAGATGAAGTCAAGGGTATGTGCTGTGTTAGCAGCTGTTaGCAGAATATGGAACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: RKILWNRGHYKDEVKGMCCVSSC*QNMEPS Trigger: AGATGGTTCCATATTCTGGCAACAGCTGCTAACACA...GCACATACCCTTGACTTCATCTTTATAGTGCCCTCTGTTCCATAGTATCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | AGATATATGAAATGTTCATCTTCGTGTACAAAGGAAAGGAGGCCAGAAGAGGGCCCTTCTTGGATGGATTaGTGTCAACTGAAAGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RYMKCSSSCTKERRPEEGPSWMD*CQLKVS Trigger: GCTAACTTTCAGTTGACACCAATCCATCCAAGAAGG...GCCCTCTTCTGGCCTCCTTTCCTTTGTACACGAAGATGAACATTTCATATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATAAGCTGGAGAGATGTTaGGAAGGCAGAATCCACGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLRSQINLQRRGRQVSSNKLERC*EGRIHG Trigger: CCCGTGGATTCTGCCTTCCCAACATCTCTCCAGCTT...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 90 bp | AGTCACAGCTTTTATTGGGATATGGTGAGATGTAGTAAGTTATGCTaGGCCAAGGATTTAGGGGCTTGGGATTGGCTCAAATACTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: SHSFYWDMVRCSKLC*AKDLGAWDWLKYCI Trigger: TATACAGTATTTGAGCCAATCCCAAGCCCCTAAATCCTTGGCCAAGCATAACTTACTACATCTCACCATATCCCAATAAAAGCTGTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGACTTCAGCATTCCAGGTTCTCAGGATAAATTCATACAGGAAGGAAAAGAACCTCACGAAGAGAAATaGTTCCCCTTTCTGTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: PDFSIPGSQDKFIQEGKEPHEEK*FPFLLT Trigger: TGTTAACAGAAAGGGGAATCATTTCTCTTCGTGAGG...TTCTTTTCCTTCCTGTATGAATTTATCCTGAGAACCTGGAATGCTGAAGTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | GGATTTAGGGGCTTGGGATTGGCTCAAATACTGTATATAAGCTTATGTGCTTGGGCTGTTGCCAGAATATaGAACCATCTTTGTTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GFRGLGLAQILYISLCAWAVARI*NHLCCC Trigger: ACAACAACAAAGATGGTTCCATATTCTGGCAACAGC...CCAAGCACATAAGCTTATATACAGTATTTGAGCCAATCCCAAGCCCCTAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | GGATTTAGGGGCTTGGGATTGGCTCAAATACTGTATATAAGCTTATGTGCTTGGAATGCCTCTGTTAAGTaGACTTTTCTTATCTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: GFRGLGLAQILYISLCAWNASVK*TFLIWT Trigger: GGTCCAGATAAGAAAAGTCCACTTAACAGAGGCATT...CCAAGCACATAAGCTTATATACAGTATTTGAGCCAATCCCAAGCCCCTAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTAAAAGGAAGATACTATaGAACAGAGGGCACTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: MQICTLILISGALFTRSCKRKIL*NRGHYK Trigger: TTTATAGTGCCCTCTGTTCCATAGTATCTTCCTTTT...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATTGGTTAAGAGGGGAATaGTGGCATTATTATCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: KLRSQINLQRRGRQVSSNWLRGE*WHYYPH Trigger: ATGTGGATAATAATGCCAGCATTCCCCTCTTAACCA...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATTTATATTTTCCTTCCTaGTCCACTTCTCCTTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KLRSQINLQRRGRQVSSNLYFPS*STSPCL Trigger: AAGACAAGGAGAAGTGGATCAGGAAGGAAAATATAA...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATGGTAGGGTTCATTTCTaGACTTCAAAGATGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: KLRSQINLQRRGRQVSSNGRVHF*TSKMKL Trigger: CAATTTCATCTTTGAAGTTCAGAAATGAACCCTACC...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | CACGGGACCTGGCTCTGCGAAAGGGAATGTGGTGCATaGGGAGAATTTAGCTCTGGAGAATGGTTAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGTWLCERECGA*GEFSSGEWLRG Trigger: CCCTCTTAACCATTCTCCAGAGCTAAATTCTCCTCATGCACCACATTCCCTTTCGCAGAGCCAGGTCCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGGATACCATGTGGGCTTaGGGAACTGAATTTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLASSVPCLLVAELQSTLDTMWA*GTEFRP Trigger: GGGCCTAAATTCAGTTCCCAAAGCCCACATGGTATC...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | TGGCTGCTTCTGAGTCTTCACAAAAGTCCCTACAGGTaGCAATGCTCGCCACACCCCTTCTCTCTGAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: WLLLSLHKSPYR*QCSPHPFSLSY Trigger: GTAACTCAGAGAGAAGGGGTGTGGCGAGCATTGTCACCTGTAGGGACTTTTGTGAAGACTCAGAAGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | AATGATGAACTGAGTGCACGAAGTGTTGCTTTGGCTTaGCCAGCTGGAAGCCACTTCCCCATGGGTATCATG | + |
|
Preference number: 3 (lower is better) Translates to: NDELSARSVALA*PAGSHFPMGIM Trigger: CATGATACCCATGGGGAAGTGGCTTCCAGCTGGGCAAGCCAAAGCAACACTTCGTGCACTCAGTTCATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | AACCTTGTGAAGGAATATGTGGGGTGGAGAGCACTGTaGCACAGAGTCCTGATCTGCTGTACATGGTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLVKEYVGWRAL*HRVLICCTWCQ Trigger: CTGACACCATGTACAGCAGATCAGGACTCTGTGGCACAGTGCTCTCCACCCCACATATTCCTTCACAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | TTGCTTTGGCTTGCCCAGCTGGAAGCCACTTCCCCATaGGTATCATGTCTTTCCTCCACACTCTGTAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LLWLAQLEATSP*VSCLSSTLCSI Trigger: GATACTACAGAGTGTGGAGGAAAGACATGATACCCATGGGGAAGTGGCTTCCAGCTGGGCAAGCCAAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | CATGTGGAAGACAACCTTGTGAAGGAATATGTGGGGTaGAGAGCACTGTGCCACAGAGTCCTGATCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HVEDNLVKEYVG*RALCHRVLICC Trigger: ACAGCAGATCAGGACTCTGTGGCACAGTGCTCTCCACCCCACATATTCCTTCACAAGGTTGTCTTCCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CAA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCGGGCAATGGATTCCCTaGGAACTGCAGTTAAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: PCLASSVPCLLVAELQSTGQWIP*ELQLKW Trigger: CCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCC...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | ATGGTGTCAGATCTAAGATGGCTCCCGGGACACCAGTaGGACAGCAAAAAGGAACTAAGGTCAAGACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MVSDLRWLPGHQ*DSKKELRSRQW Trigger: CCACTGTCTTGACCTTAGTTCCTTTTTGCTGTCTCACTGGTGTCCCGGGAGCCATCTTAGATCTGACACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | AATATGTGGGGTGGAGAGCACTGTGCCACAGAGTCCTaGTCTGCTGTACATGGTGTCAGATCTAAGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NMWGGEHCATES*SAVHGVRSKMA Trigger: AGCCATCTTAGATCTGACACCATGTACAGCAGATCAGGACTCTGTGGCACAGTGCTCTCCACCCCACATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | TACCAGGAGTTGTCACGTGACTCTGTCGCCTCTAAATaGCCATCCTCAGTCCTGTTCCCACAAAAGGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: YQELSRDSVASK*PSSVLFPQKGF Trigger: AAATCCCTTTTGTGGGAACAGGACTGAGGATGGGCATTTAGAGGCGACAGAGTCACGTGACAACTCCTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGATACTATGGAACAGAGGGCACTATAAAGATGAAGTCAAGGGTATGTGCGCACGAAGTGTTGCTTaGGCTTGCCCAGCTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKILWNRGHYKDEVKGMCARSVA*ACPAGS Trigger: GCTTCCAGCTGGGCAAGCCAAAGCAACACTTCGTGC...GCACATACCCTTGACTTCATCTTTATAGTGCCCTCTGTTCCATAGTATCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | CCTACAGGTGACAATGCTCGCCACACCCCTTCTCTCTaGGTTACCTCATCAGTCACAGCTTTTATTGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PTGDNARHTPSL*VTSSVTAFIGI Trigger: TATCCCAATAAAAGCTGTGACTGATGAGGTAACTCAGAGAGAAGGGGTGTGGCGAGCATTGTCACCTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | TTGGAACTGCAGTTAAAATGGTTGGGAGATACCATGTaGGCTTTGGGAACTGAATTTAGGCCCTCTGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LELQLKWLGDTM*ALGTEFRPSGG Trigger: TCCTCCAGAGGGCCTAAATTCAGTTCCCAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAGTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | AGAGGGCAATGGATTCCCTTGGAACTGCAGTTAAAATaGTTGGGAGATACCATGTGGGCTTTGGGAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RGQWIPLELQLK*LGDTMWALGTE Trigger: TTCAGTTCCCAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACTTCAGCATTCCAGGTTCTCAGGATAAATTCATACAGGAAGGAAAAGAACTGATCCACTTCTCCTaGTCTTCCTTTACCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PDFSIPGSQDKFIQEGKELIHFS*SSFTSH Trigger: ATGGGAGGTAAAGGAAGACAAGGAGAAGTGGATCAG...TTCTTTTCCTTCCTGTATGAATTTATCCTGAGAACCTGGAATGCTGAAGTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTCATCCCTCTATCCACTaGAAAGTTACTTCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MQICTLILISGALFTRSCHPSIH*KVTSSG Trigger: CCCAGAAGAAGTAACTTTCAAGTGGATAGAGGGATG...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | TTGTGTACCTTACAGGACTTAGCTAATAGTGGCATCTaGCAGACTTCAGCATTCCAGGTTCTCAGGATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LCTLQDLANSGI*QTSAFQVLRIN Trigger: ATTTATCCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTGTAAGGTACACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | GGAGAATTTAGCTCTGGAGAATGGTTAAGAGGGGAATaGTGGCATTATTATCCACATGTAAGGAAGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GEFSSGEWLRGE*WHYYPHVRKSS Trigger: AGATGACTTCCTTACATGTGGATAATAATGCCAGCATTCCCCTCTTAACCATTCTCCAGAGCTAAATTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | AACCTGAATGCCTCTGTTAAGTGGACTTTTCTTATCTaGACCTTCTTGGATGGATTGGTGTCAACTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NLNASVKWTFLI*TFLDGLVSTES Trigger: ACTTTCAGTTGACACCAATCCATCCAAGAAGGTCCAGATAAGAAAAGTCCACTTAACAGAGGCATTCAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | TTCTCTCTGAGTTACCTCATCAGTCACAGCTTTTATTaGGATATGGTGAGATGTAGTAAGTTATGCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSLSYLISHSFY*DMVRCSKLCLA Trigger: GGCCAAGCATAACTTACTACATCTCACCATATCCCAATAAAAGCTGTGACTGATGAGGTAACTCAGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR GCA 72 bp | AAACAGTGTTTGAAAATATGTGCTAAAGAACTACCATaGTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQCLKICAKELP*LASSVPCLLVA Trigger: AGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGGTAGTTCTTTAGCACATATTTTCAAACACTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CCA 72 bp | AGTGGACTTTTCTTATCTGGACCTTCTTGGATGGATTaGTGTCAACTGAAAGTTAGCAGCAATATCCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: SGLFLSGPSWMD*CQLKVSSNILF Trigger: GAATAGGATATTGCTGCTAACTTTCAGTTGACACCAATCCATCCAAGAAGGTCCAGATAAGAAAAGTCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | TGTAAGGAAGTCATCTTTCTCTCAATCTGGAAGAGATaGAATGACAGGAATATTCAACCTGAATGCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CKEVIFLSIWKR*NDRNIQPECLC Trigger: ACAGAGGCATTCAGGTTGAATATTCCTGTCATTTCATCTCTTCCAGATTGAGAGAAAGATGACTTCCTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR TCA 72 bp | TCTTATCTGGACCTTCTTGGATGGATTGGTGTCAACTaGAAGTTAGCAGCAATATCCTATTCATCTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SYLDLLGWIGVN*KLAAISYSSLY Trigger: ATACAAAGATGAATAGGATATTGCTGCTAACTTTCAGTTGACACCAATCCATCCAAGAAGGTCCAGATAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | CAGGACTTAGCTAATAGTGGCATCTGCCAGACTTCAGCATTCCAGGTTCTCAGGGCAATGTCCAGTTGCTaGAGGCTCTCACAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLANSGICQTSAFQVLRAMSSC*RLSQLC Trigger: GCAGAGCTGTGAGAGCCTTCAGCAACTGGACATTGC...CCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR GCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCCAGCTGAGGAAGTATaGTACCACGACGGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCLASSVPCLLVAELQSTPAEEV*YHDGED Trigger: ATCTTCACCGTCGTGGTAGCATACTTCCTCAGCTGG...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR GCA 90 bp | CAGGACTTAGCTAATAGTGGCATCTGCCAGACTTCAGCATTCCAGGTTCTCAGGCGGCACAGCCAGACCTaGTGGAAGAGATGTTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDLANSGICQTSAFQVLRRHSQT*WKRCFR Trigger: CCTAAAACATCTCTTCCAGCAGGTCTGGCTGTGCCG...CCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR GCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCAGGCTCTCACAGCTCTaGTGGATGATTCCAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLASSVPCLLVAELQSTRLSQL*WMIPVF Trigger: GAAAACTGGAATCATCCAGCAGAGCTGTGAGAGCCT...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCACAGCCAGACCTGCTaGAAGAGATGTTTTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCLASSVPCLLVAELQSTHSQTC*KRCFRC Trigger: ACACCTAAAACATCTCTTCCAGCAGGTCTGGCTGTG...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | AGAATAAATGATGAACTGAGTGCACGAAGTGTTGCTTaGGCTTGCCCAGCTGGAAGCCACTTCCCCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RINDELSARSVA*ACPAGSHFPMG Trigger: ACCCATGGGGAAGTGGCTTCCAGCTGGGCAAGCCAAAGCAACACTTCGTGCACTCAGTTCATCATTTATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | CTGCAGTTAAAATGGTTGGGAGATACCATGTGGGCTTaGGGAACTGAATTTAGGCCCTCTGGAGGAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLKWLGDTMWA*GTEFRPSGGVA Trigger: GGCTACTCCTCCAGAGGGCCTAAATTCAGTTCCCAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | TTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTaGCAAAGCACCCTGAAGCCTGGTGCAATAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LASSVPCLLVAE*QSTLKPGAIEH Trigger: GTGTTCTATTGCACCAGGCTTCAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCATAAAGCACTGGGTTaGAACAGCAATGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLASSVPCLLVAELQSTHKALG*NSNERR Trigger: CCTTCTCTCATTGCTGTTTCAACCCAGTGCTTTATG...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR GCA 90 bp | AGGAAGATACTATGGAACAGAGGGCACTATAAAGATGAAGTCAAGGGTATGTGCGGATGGAGAACAGGATaGTGGCTGCCCACACACATG | + |
|
Preference number: 4 (lower is better) Translates to: RKILWNRGHYKDEVKGMCGWRTG*WLPTHM Trigger: CATGTGTGTGGGCAGCCAGCATCCTGTTCTCCATCC...GCACATACCCTTGACTTCATCTTTATAGTGCCCTCTGTTCCATAGTATCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACTTAGCTAATAGTGGCATCTGCCAGACTTCAGCATTCCAGGTTCTCAGGAAGGAGATCACTTTGTaGAAGACAGCATCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QDLANSGICQTSAFQVLRKEITL*KTASGM Trigger: CATCCCTGATGCTGTCTTCCACAAAGTGATCTCCTT...CCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAGATACTATGGAACAGAGGGCACTATAAAGATGAAGTCAAGGGTATGTGCGTTGTGCTGGTAGACTaGGGCCAAGAACCCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RKILWNRGHYKDEVKGMCVVLVD*GQEPMM Trigger: CATCATGGGTTCTTGGCCTCAGTCTACCAGCACAAC...GCACATACCCTTGACTTCATCTTTATAGTGCCCTCTGTTCCATAGTATCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CCA 90 bp | AGATATATGAAATGTTCATCTTCGTGTACAAAGGAAAGGAGGCCAGAAGAGGGCAGACAGCATCAGGGATaGAGAACAGGATGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYMKCSSSCTKERRPEEGRQHQG*RTGCWL Trigger: CAGCCAGCATCCTGTTCTCCATCCCTGATGCTGTCT...GCCCTCTTCTGGCCTCCTTTCCTTTGTACACGAAGATGAACATTTCATATATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | AAAGGAAAGGAGGCCAGAAGAGGGCAATGGATTCCCTaGGAACTGCAGTTAAAATGGTTGGGAGATACCATG | + |
|
Preference number: 4 (lower is better) Translates to: KGKEARRGQWIP*ELQLKWLGDTM Trigger: CATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCCTCTTCTGGCCTCCTTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | CCAGACTTCAGCATTCCAGGTTCTCAGGATAAATTCATACAGGAAGGAAAAGAATTTTCAGGAAGAGTGTaGGGTTGTAGGGAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDFSIPGSQDKFIQEGKEFSGRV*GCREPS Trigger: GCTGGGCTCCCTACAACCTCACACTCTTCCTGAAAA...TTCTTTTCCTTCCTGTATGAATTTATCCTGAGAACCTGGAATGCTGAAGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTGGGTTGAAACAGCAATaGGAGAAGGCCAAATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MQICTLILISGALFTRSCGLKQQ*EKAKWR Trigger: TCGCCATTTGGCCTTCTCTCATTGCTGTTTCAACCC...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGAAAGACATAAAGCACTaGGTTGAAACAGCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLASSVPCLLVAELQSTLKDIKH*VETAMR Trigger: TCTCATTGCTGTTTCAACCCAGTGCTTTATGTCTTT...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | GGGCAATGGATTCCCTTGGAACTGCAGTTAAAATGGTaGGGAGATACCATGTGGGCTTTGGGAACTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQWIPLELQLKW*GDTMWALGTEF Trigger: AAATTCAGTTCCCAAAGCCCACATGGTATCTCCCAACCATTTTAACTGCAGTTCCAAGGGAATCCATTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR GCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATGGGAGCAGGGAACAGTaGTGGATGTCTTCCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLRSQINLQRRGRQVSSNGSREQ*WMSSGT Trigger: TGTGCCGGAAGACATCCAGCACTGTTCCCTGCTCCC...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | GGATTTAGGGGCTTGGGATTGGCTCAAATACTGTATATAAGCTTATGTGCTTGGTGCCGAAGATCATGTTaGAGAACTTGCAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFRGLGLAQILYISLCAWCRRSC*RTCRRS Trigger: ACTTCTTCTGCAAGTTCTTCAACATGATCTTCGGCA...CCAAGCACATAAGCTTATATACAGTATTTGAGCCAATCCCAAGCCCCTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | ATGCAGATCTGCACACTGATACTGATCTCTGGAGCTTTATTTACCAGGAGTTGTTGGTGGAAAAGAAGATaGCATTGTTCTCACATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MQICTLILISGALFTRSCWWKRR*HCSHIE Trigger: TTCTATGTGAGAACAATGTCATCTTCTTTTCCACCA...ACAACTCCTGGTAAATAAAGCTCCAGAGATCAGTATCAGTGTGCAGATCTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATTGTTACCCACAAGGCTaGGGAGAAATACCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRSQINLQRRGRQVSSNCYPQG*GEIPES Trigger: ACTCTCTGGTATTTCTCCTCAGCCTTGTGGGTAACA...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATGAGGCCAAGAACCCATaGTGTTCAGAATATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KLRSQINLQRRGRQVSSNEAKNP*CSEYLQ Trigger: TTGTAAATATTCTGAACATCATGGGTTCTTGGCCTC...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR TCA 90 bp | AAACTTAGATCCCAAATAAATTTACAGAGAAGAGGAAGACAGGTCTCAAGCAATTGCGAAACAAAGTCCTaGGAATCTGTACATAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRSQINLQRRGRQVSSNCETKS*ESVHNR Trigger: TCTGTTATGTACAGATTCTCAGGACTTTGTTTCGCA...ATTGCTTGAGACCTGTCTTCCTCTTCTCTGTAAATTTATTTGGGATCTAAGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| 3UTR CAA 72 bp | TCCTGTTCCCACAAAAGGGATTTCAAACACCCTTGTTaGAAACTTAGATCCCAAATAAATTTACAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSHKRDFKHPC*KLRSQINLQRR Trigger: TCTTCTCTGTAAATTTATTTGGGATCTAAGTTTCAAACAAGGGTGTTTGAAATCCCTTTTGTGGGAACAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CCA 90 bp | GCTGCCCACACACATGATGTCACCAGCACACGGCAGCGGAGGGTATaGATACCCAGAGTAGAGATGGGGCTCACTACAGACAGGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAHTHDVTSTRQRRV*IPRVEMGLTTDRYR Trigger: CCGATACCTGTCTGTAGTGAGCCCCATCTCTACTCTGGGTATCCATACCCTCCGCTGCCGTGTGCTGGTGACATCATGTGTGTGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS GCA 90 bp | AGGAGATCACTTTGTGGAAGACAGCATCAGGGATGGAGAACAGGATaGTGGCTGCCCACACACATGATGTCACCAGCACACGGCAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLCGRQHQGWRTG*WLPTHMMSPAHGSG Trigger: TCCGCTGCCGTGTGCTGGTGACATCATGTGTGTGGGCAGCCAGCATCCTGTTCTCCATCCCTGATGCTGTCTTCCACAAAGTGATCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS GCA 90 bp | GGGGAGCAGGGAACAGTGCTGGATGTCTTCCGGCACAGCCAGACCTaGTGGAAGAGATGTTTTAGGTGTCTGCGGAACTTGATCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GEQGTVLDVFRHSQT*WKRCFRCLRNLIPT Trigger: TGTTGGGATCAAGTTCCGCAGACACCTAAAACATCTCTTCCAGCAGGTCTGGCTGTGCCGGAAGACATCCAGCACTGTTCCCTGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CCA 90 bp | GAGCAGGGAACAGTGCTGGATGTCTTCCGGCACAGCCAGACCTGCTaGAAGAGATGTTTTAGGTGTCTGCGGAACTTGATCCCAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQGTVLDVFRHSQTC*KRCFRCLRNLIPTK Trigger: CTTTGTTGGGATCAAGTTCCGCAGACACCTAAAACATCTCTTCCAGCAGGTCTGGCTGTGCCGGAAGACATCCAGCACTGTTCCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CAA 90 bp | CCATGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCTTTAAGGAGATCACTTaGTGGAAGACAGCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCLASSVPCLLVAELQSTFKEIT*WKTASG Trigger: CCCTGATGCTGTCTTCCACAAAGTGATCTCCTTAAA...GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGCTTCCTCAGTCCCGTGTTTGCTTGTTGCTGAGTTGCAAAGCACCCTGTTGAGGATGAAGATATaGGTGAGTGACTCTAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: CLASSVPCLLVAELQSTLLRMKI*VSDSRF Trigger: GAATCTAGAGTCACTCACCAATATCTTCATCCTCAA...CAGGGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CAA 90 bp | CAGGACTTAGCTAATAGTGGCATCTGCCAGACTTCAGCATTCCAGGTTCTCAGGATGCCGAAGATCATGTaGAAGAACTTGCAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDLANSGICQTSAFQVLRMPKIM*KNLQKK Trigger: CTTCTTCTGCAAGTTCTTCAACATGATCTTCGGCAT...CCTGAGAACCTGGAATGCTGAAGTCTGGCAGATGCCACTATTAGCTAAGTCCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS-3UTR CAA 90 bp | AGATATATGAAATGTTCATCTTCGTGTACAAAGGAAAGGAGGCCAGAAGAGGGCGAAAAGAAGATGACATaGTTCTCACATAGAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RYMKCSSSCTKERRPEEGEKKMT*FSHRRL Trigger: GAGTCTTCTATGTGAGAACAATGTCATCTTCTTTTC...GCCCTCTTCTGGCCTCCTTTCCTTTGTACACGAAGATGAACATTTCATATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CCA 72 bp | ACACATGATGTCACCAGCACACGGCAGCGGAGGGTATaGATACCCAGAGTAGAGATGGGGCTCACTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: THDVTSTRQRRV*IPRVEMGLTTD Trigger: GTCTGTAGTGAGCCCCATCTCTACTCTGGGTATCCATACCCTCCGCTGCCGTGTGCTGGTGACATCATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS GCA 72 bp | GGAACAGTGCTGGATGTCTTCCGGCACAGCCAGACCTaGTGGAAGAGATGTTTTAGGTGTCTGCGGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTVLDVFRHSQT*WKRCFRCLRNL Trigger: CAAGTTCCGCAGACACCTAAAACATCTCTTCCAGCAGGTCTGGCTGTGCCGGAAGACATCCAGCACTGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS TCA 72 bp | AAATGGCGACAGATAATCATAGCAATGTCCAGTTGCTaGAGGCTCTCACAGCTCTGCTGGATGATTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KWRQIIIAMSSC*RLSQLCWMIPV Trigger: AACTGGAATCATCCAGCAGAGCTGTGAGAGCCTTCAGCAACTGGACATTGCTATGATTATCTGTCGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CAA 90 bp | CAGGAGAACATCAGGTCTGAGAGACACAGGTTGAGGATGAAGATATaGGTGAGTGACTCTAGATTCTCATACTTCACCAAGACCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: QENIRSERHRLRMKI*VSDSRFSYFTKTHK Trigger: TTTGTGGGTCTTGGTGAAGTATGAGAATCTAGAGTCACTCACCAATATCTTCATCCTCAACCTGTGTCTCTCAGACCTGATGTTCTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CAA 72 bp | ATCAGGTCTGAGAGACACAGGTTGAGGATGAAGATATaGGTGAGTGACTCTAGATTCTCATACTTCACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRSERHRLRMKI*VSDSRFSYFTK Trigger: CTTGGTGAAGTATGAGAATCTAGAGTCACTCACCAATATCTTCATCCTCAACCTGTGTCTCTCAGACCTGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||
| CDS CCA 72 bp | TGTTCAGAATATTTACAATTTAAGGAGATCACTTTGTaGAAGACAGCATCAGGGATGGAGAACAGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSEYLQFKEITL*KTASGMENRML Trigger: CAGCATCCTGTTCTCCATCCCTGATGCTGTCTTCCACAAAGTGATCTCCTTAAATTGTAAATATTCTGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182350.3 |
||