Pregenerated sensors for XAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019470Ensembl transcript IDs: ENSMUST00000019614.13, ENSMUST00000159235.2, ENSMUST00000159548.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCACACAGCTCGTGCCACAGCTGGTAGTTGGATTTACCAGCCTTaGATACAAAGCGCTCATCATTCACCACGGTGGCCAGGCGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GHTARATAGSWIYQP*IQSAHHSPRWPGAV Trigger: CACAGCGCCTGGCCACCGTGGTGAATGATGAGCGCTTTGTATCCAAGGCTGGTAAATCCAACTACCAGCTGTGGCACGAGCTGTGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR TCA 90 bp | CACGGTCAAAGGTGCGGCGGGTATGTGTTACCCTTCCCTGGTCCATaGGAAACTGGCAGTAGTCTAACCACAGGCGTGGCATCTTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: HGQRCGGYVLPFPGP*ETGSSLTTGVASCA Trigger: TGCACAAGATGCCACGCCTGTGGTTAGACTACTGCCAGTTTCTCATGGACCAGGGAAGGGTAACACATACCCGCCGCACCTTTGACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR GCA 90 bp | GACATCTTCATAGGCAGGATCAGTCACACAGCGATGTTTCACCTGTaGCCGGCGTGCCTTCAGATATCGGTACCAGAGTTTGTAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DIFIGRISHTAMFHL*PACLQISVPEFVAG Trigger: CCCAGCTACAAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGATCCTGCCTATGAAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAAAGCGCTCATCATTCACCACGGTGGCCAGGCGCTGTGCAGCCTCGTCTAGCAGTCTCAGGCAGTaGGTGGGAGCGCAGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: DTKRSSFTTVARRCAASSSSLRQ*VGAQET Trigger: CGTTTCCTGCGCTCCCACCCACTGCCTGAGACTGCT...AGACGAGGCTGCACAGCGCCTGGCCACCGTGGTGAATGATGAGCGCTTTGTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR TCA 90 bp | GACGGTAGCCTCGCACAGCAGTCTCAGGCAGTGGGTGGGAGCGCAGGAAACGTACCCTTCCCTGGTCCATaGGAAACTGGCAGTAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: DGSLAQQSQAVGGSAGNVPFPGP*ETGSSL Trigger: TAGACTACTGCCAGTTTCTCATGGACCAGGGAAGGG...TACGTTTCCTGCGCTCCCACCCACTGCCTGAGACTGCTGTGCGAGGCTACCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 90 bp | ACGGTGGCCAGGCGCTGTGCAGCCTCGTCTAGCCGGTCACTGGATTaGAGATACTCGATGTATTCCTCAGCGCTCTCAGGACTCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TVARRCAASSSRSLD*RYSMYSSALSGLSL Trigger: CAAGCTGAGTCCTGAGAGCGCTGAGGAATACATCGAGTATCTCAAATCCAGTGACCGGCTAGACGAGGCTGCACAGCGCCTGGCCACCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAAAGCGCTCATCATTCACCACGGTGGCCAGGCGCTGTGCAGCCTCGTCTTGTGTTACCCTTCCCTaGTCCATGAGAAACTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DTKRSSFTTVARRCAASSCVTLP*SMRNWQ Trigger: CTGCCAGTTTCTCATGGACCAGGGAAGGGTAACACA...AGACGAGGCTGCACAGCGCCTGGCCACCGTGGTGAATGATGAGCGCTTTGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 90 bp | GTGAGCCCACCACGGATTATGGCATCCACATTGAGAGACTGTACCTaGTCCGGATTCTGGGAGATAAGGTCACACAGCTCGTGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VSPPRIMASTLRDCT*SGFWEIRSHSSCHS Trigger: GCTGTGGCACGAGCTGTGTGACCTTATCTCCCAGAATCCGGACAAGGTACAGTCTCTCAATGTGGATGCCATAATCCGTGGTGGGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCGGATTCTGGGAGATAAGGTCACACAGCTCGTGCCACAGCTGGTAGTTGGAAGGCGTGGCATCTTGTaGATGAACACAAAGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VRILGDKVTQLVPQLVVGRRGIL*MNTKAL Trigger: GAGGGCCTTTGTGTTCATGCACAAGATGCCACGCCT...TCCAACTACCAGCTGTGGCACGAGCTGTGTGACCTTATCTCCCAGAATCCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCATGGCAGTTGTTGACATCTTCATAGGCAGGATCAGTCACACAGCGATGCACCTGTGCCCGGCGTaGCTTCAGATATCGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: PLMAVVDIFIGRISHTAMHLCPA*LQISVP Trigger: TGGTACCGATATCTGAAGGCACGCCGGGCACAGGTG...CATCGCTGTGTGACTGATCCTGCCTATGAAGATGTCAACAACTGCCATGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR GCA 90 bp | CACACAGCTCGTGCCACAGCTGGTAGTTGGATTTACCAGCCTTGGATACAAAGCTTGTGTGATGGGCAGTaGCCTGAGGGCACGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HTARATAGSWIYQPWIQSLCDGQ*PEGTVK Trigger: TTTGACCGTGCCCTCAGGGCACTGCCCATCACACAA...GCTTTGTATCCAAGGCTGGTAAATCCAACTACCAGCTGTGGCACGAGCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGGGTGGGAGCGCAGGAAACGTAGATACAGGGGCCAGATGCGAGAGTGTTACAAAGGCCCTCTCATaGCAGTTGTTGACATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: AVGGSAGNVDTGARCESVTKALS*QLLTSS Trigger: TGAAGATGTCAACAACTGCCATGAGAGGGCCTTTGT...AACACTCTCGCATCTGGCCCCTGTATCTACGTTTCCTGCGCTCCCACCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 90 bp | TGGTCAGTGAAACGGGTGAGCCCACCACGGATTATGGCATCCACATaGAGAGACTGTACCTTGTCCGGATTCTGGGAGATAAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: WSVKRVSPPRIMAST*RDCTLSGFWEIRSH Trigger: GTGTGACCTTATCTCCCAGAATCCGGACAAGGTACAGTCTCTCAATGTGGATGCCATAATCCGTGGTGGGCTCACCCGTTTCACTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTCTAGCCGGTCACTGGATTTGAGATACTCGATGTATTCCTCAGCGCTCTCAGTGGCATCTTGTGCATaGACACAAAGGCCCTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SSSRSLDLRYSMYSSALSVASCA*TQRPSH Trigger: ATGAGAGGGCCTTTGTGTTCATGCACAAGATGCCAC...TGAGAGCGCTGAGGAATACATCGAGTATCTCAAATCCAGTGACCGGCTAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CCA 72 bp | CAGCCTTGGATACAAAGCGCTCATCATTCACCACGGTaGCCAGGCGCTGTGCAGCCTCGTCTAGCCGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: QPWIQSAHHSPR*PGAVQPRLAGH Trigger: GTGACCGGCTAGACGAGGCTGCACAGCGCCTGGCCACCGTGGTGAATGATGAGCGCTTTGTATCCAAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CAA 90 bp | GCACGGTCAAAGGTGCGGCGGGTATGTGTTACCCTTCCCTGGTCCATGAGAAACCACAGGCGTGGCATCTaGTGCATGAACACAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ARSKVRRVCVTLPWSMRNHRRGI*CMNTKA Trigger: GGCCTTTGTGTTCATGCACAAGATGCCACGCCTGTG...GTTTCTCATGGACCAGGGAAGGGTAACACATACCCGCCGCACCTTTGACCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR TCA 72 bp | AGGTGCGGCGGGTATGTGTTACCCTTCCCTGGTCCATaGGAAACTGGCAGTAGTCTAACCACAGGCGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: RCGGYVLPFPGP*ETGSSLTTGVA Trigger: TGCCACGCCTGTGGTTAGACTACTGCCAGTTTCTCATGGACCAGGGAAGGGTAACACATACCCGCCGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR TCA 72 bp | GGCGCTGTGCAGCCTCGTCTAGCCGGTCACTGGATTTaGGATACTCGATGTATTCCTCAGCGCTCTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GAVQPRLAGHWI*DTRCIPQRSQD Trigger: GTCCTGAGAGCGCTGAGGAATACATCGAGTATCTCAAATCCAGTGACCGGCTAGACGAGGCTGCACAGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCAGTGAAACGGGTGAGCCCACCACGGATTATGGCATCCACATTGAGAGACCCAGATGCGAGAGTGTaGTGTGATGGGCAGTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: WSVKRVSPPRIMASTLRDPDARV*CDGQCP Trigger: AGGGCACTGCCCATCACACAACACTCTCGCATCTGG...GTCTCTCAATGTGGATGCCATAATCCGTGGTGGGCTCACCCGTTTCACTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR GCA 72 bp | ATCAGTCACACAGCGATGTTTCACCTGTGCCCGGCGTaGCTTCAGATATCGGTACCAGAGTTTGTAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ISHTAMFHLCPA*LQISVPEFVAG Trigger: CCCAGCTACAAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CCA 72 bp | GCTCGTGCCACAGCTGGTAGTTGGATTTACCAGCCTTaGATACAAAGCGCTCATCATTCACCACGGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ARATAGSWIYQP*IQSAHHSPRWP Trigger: TGGCCACCGTGGTGAATGATGAGCGCTTTGTATCCAAGGCTGGTAAATCCAACTACCAGCTGTGGCACGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CCA 72 bp | GCATCCACATTGAGAGACTGTACCTTGTCCGGATTCTaGGAGATAAGGTCACACAGCTCGTGCCACAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: ASTLRDCTLSGF*EIRSHSSCHSW Trigger: CCAGCTGTGGCACGAGCTGTGTGACCTTATCTCCCAGAATCCGGACAAGGTACAGTCTCTCAATGTGGATGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR GCA 72 bp | ATAGGCAGGATCAGTCACACAGCGATGTTTCACCTGTaGCCGGCGTGCCTTCAGATATCGGTACCAGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: IGRISHTAMFHL*PACLQISVPEF Trigger: AAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGATCCTGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCGGATTCTGGGAGATAAGGTCACACAGCTCGTGCCACAGCTGGTAGTTGGAAGCCGGTCACTGGATTaGAGATACTCGATGTATTCC | + |
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Preference number: 3 (lower is better) Translates to: VRILGDKVTQLVPQLVVGSRSLD*RYSMYS Trigger: GGAATACATCGAGTATCTCAAATCCAGTGACCGGCT...TCCAACTACCAGCTGTGGCACGAGCTGTGTGACCTTATCTCCCAGAATCCGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCGACGGTAGCCTCGCACAGCAGTCTCAGGCAGTGGGTGGGAGCGCAGGAAGCGGAGCCAGCATTTaGCGGAGAACTGGTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GSDGSLAQQSQAVGGSAGSGASI*RRTGSS Trigger: TGAGGAACCAGTTCTCCGTCAAATGCTGGCTCCGCT...TCCTGCGCTCCCACCCACTGCCTGAGACTGCTGTGCGAGGCTACCGTCGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR CCA 90 bp | CATCATTCACCACGGTGGCCAGGCGCTGTGCAGCCTCGTCTAGCCGGTCACTGGCTGGGTGTAGAGGGGTaGGAGCTGATGAGCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HHSPRWPGAVQPRLAGHWLGVEG*ELMSRV Trigger: TACCCTGCTCATCAGCTCCCACCCCTCTACACCCAG...CCAGTGACCGGCTAGACGAGGCTGCACAGCGCCTGGCCACCGTGGTGAATGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR TCA 90 bp | CACACAGCGATGTTTCACCTGTGCCCGGCGTGCCTTCAGATATCGGTACCAGAGTGGGGGCCCCCTGTTTaGACTCGATGTAGCGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HTAMFHLCPACLQISVPEWGPPV*TRCSGA Trigger: GGCTCCGCTACATCGAGTTCAAACAGGGGGCCCCCA...CTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTCAGGCAGTGGGTGGGAGCGCAGGAAACGTAGATACAGGGGCCAGATGCACAGGGAGGGCCATTTaGACCTGCAGGGAAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QSQAVGGSAGNVDTGARCTGRAI*TCREAV Trigger: AACTGCTTCCCTGCAGGTGCAAATGGCCCTCCCTGT...GCATCTGGCCCCTGTATCTACGTTTCCTGCGCTCCCACCCACTGCCTGAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 72 bp | AGGCGCTGTGCAGCCTCGTCTAGCCGGTCACTGGATTaGAGATACTCGATGTATTCCTCAGCGCTCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RRCAASSSRSLD*RYSMYSSALSG Trigger: TCCTGAGAGCGCTGAGGAATACATCGAGTATCTCAAATCCAGTGACCGGCTAGACGAGGCTGCACAGCGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR CCA 90 bp | GTAGTTGGATTTACCAGCCTTGGATACAAAGCGCTCATCATTCACCACGGTGGCGCCCGCTCATACAACTaGTTGAGTCGGGGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VVGFTSLGYKALIIHHGGARSYN*LSRGLG Trigger: CCCCAAGCCCCGACTCAACCAGTTGTATGAGCGGGC...GCCACCGTGGTGAATGATGAGCGCTTTGTATCCAAGGCTGGTAAATCCAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 72 bp | CCACGGATTATGGCATCCACATTGAGAGACTGTACCTaGTCCGGATTCTGGGAGATAAGGTCACACAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PRIMASTLRDCT*SGFWEIRSHSS Trigger: CGAGCTGTGTGACCTTATCTCCCAGAATCCGGACAAGGTACAGTCTCTCAATGTGGATGCCATAATCCGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| 3UTR CAA 72 bp | AAACGGGTGAGCCCACCACGGATTATGGCATCCACATaGAGAGACTGTACCTTGTCCGGATTCTGGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: KRVSPPRIMAST*RDCTLSGFWEI Trigger: TATCTCCCAGAATCCGGACAAGGTACAGTCTCTCAATGTGGATGCCATAATCCGTGGTGGGCTCACCCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR TCA 90 bp | ACTGCGGATATAGTAGTCTGCCAAAGAGCACCACAGCTTGCCCAGCTGGTCAGTAGAACTGGTTCCTCATaGTTTCTTCCTCATAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TADIVVCQRAPQLAQLVSRTGSS*FLPHRE Trigger: TTCCCTATGAGGAAGAAATCATGAGGAACCAGTTCT...ACTGACCAGCTGGGCAAGCTGTGGTGCTCTTTGGCAGACTACTATATCCGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCATGGCAGTTGTTGACATCTTCATAGGCAGGATCAGTCACACAGCGATGCATTTGACGGAGAACTaGTTCCTCATGATTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLMAVVDIFIGRISHTAMHLTEN*FLMISS Trigger: GGAAGAAATCATGAGGAACCAGTTCTCCGTCAAATG...CATCGCTGTGTGACTGATCCTGCCTATGAAGATGTCAACAACTGCCATGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS CCA 90 bp | GCTGTGCTGGCTCCACTGCCCTGGTCGCACGGTCATACACAGCCATaGCATGGCGGGCAAGGCCCCACTCCTCCTCCAGCTGTGCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: AVLAPLPWSHGHTQP*HGGQGPTPPPAVRR Trigger: TCTACGCACAGCTGGAGGAGGAGTGGGGCCTTGCCCGCCATGCCATGGCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | CCCTGGATGCATCACTCCTCACAAAGAAGATCTTGCTCTGGGCCCTaGGGGGCTGGTCCCGCTCCGCCTCAGCTGCCAGCTGTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: PWMHHSSQRRSCSGP*GAGPAPPQLPAVLL Trigger: GAGCAGAACAGCTGGCAGCTGAGGCGGAGCGGGACCAGCCCCCCAGGGCCCAGAGCAAGATCTTCTTTGTGAGGAGTGATGCATCCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | GCCCTGATGGAGGGCTACACGCTTGTGCCACTCGTGGACGTGGTGTaGGTTCTGGCGCAGAAGGACACTATTGAGAAGCAGGGGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: ALMEGYTLVPLVDVV*VLAQKDTIEKQGPS Trigger: CGACGGCCCCTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCACGAGTGGCACAAGCGTGTAGCCCTCCATCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | GATGGCCCGGGCGCGGTCGATTTCACCGAGCTTGCACTCCATGTCTaGAAACCGCAGGCACATCTCACGGGCATGCTCATCAGACAGCAC | + |
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Preference number: 5 (lower is better) Translates to: DGPGAVDFTELALHV*KPQAHLTGMLIRQH Trigger: GTGCTGTCTGATGAGCATGCCCGTGAGATGTGCCTGCGGTTTGCAGACATGGAGTGCAAGCTCGGTGAAATCGACCGCGCCCGGGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | TGGAGGGCTACACGCTTGTGCCACTCGTGGACGTGGTGTGGGTTCTaGCGCAGAAGGACACTATTGAGAAGCAGGGGCCGTCGGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: WRATRLCHSWTWCGF*RRRTLLRSRGRRLM Trigger: CATCAGCCGACGGCCCCTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCACGAGTGGCACAAGCGTGTAGCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | CCCCAGTTGTCCGGGGATCACAGATCTGGGAGCAGAAGCTGTAGATaGCCCGGGCGCGGTCGATTTCACCGAGCTTGCACTCCATGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PQLSGDHRSGSRSCR*PGRGRFHRACTPCL Trigger: CAGACATGGAGTGCAAGCTCGGTGAAATCGACCGCGCCCGGGCCATCTACAGCTTCTGCTCCCAGATCTGTGATCCCCGGACAACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | AGCAGAAGCTGTAGATGGCCCGGGCGCGGTCGATTTCACCGAGCTTaGACTCCATGTCTGCAAACCGCAGGCACATCTCACGGGCATGCT | + |
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Preference number: 5 (lower is better) Translates to: SRSCRWPGRGRFHRA*TPCLQTAGTSHGHA Trigger: AGCATGCCCGTGAGATGTGCCTGCGGTTTGCAGACATGGAGTGCAAGCTCGGTGAAATCGACCGCGCCCGGGCCATCTACAGCTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | TGTTCTGCTCTCTGTTCCAGCAGCTTCATGTCATCCATGCCACTCTaGCCAGGAGCCAGGTCAGACACGGTGCCTGTGGCACTGCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: CSALCSSSFMSSMPL*PGARSDTVPVALPD Trigger: GTCGGGCAGTGCCACAGGCACCGTGTCTGACCTGGCTCCTGGGCAGAGTGGCATGGATGACATGAAGCTGCTGGAACAGAGAGCAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CTGCCAGCTGTTCTGCTCTCTGTTCCAGCAGCTTCATGTCATCCATaGCACTCTGCCCAGGAGCCAGGTCAGACACGGTGCCTGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LPAVLLSVPAASCHP*HSAQEPGQTRCLWH Trigger: GTGCCACAGGCACCGTGTCTGACCTGGCTCCTGGGCAGAGTGGCATGGATGACATGAAGCTGCTGGAACAGAGAGCAGAACAGCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | GTGGCGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTTaGTTGACTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: VAWLCAGPGFGHTRP*LTGKCPGFPPSRQA Trigger: TGCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGCCACGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | CGAACACAGCAGCTGGTACACTCTGCTGTTCCAGTCGGACTTCATTaGGCTCCAGGTCCATCTCGTCCTCGTCCTCATCCTCGCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RTQQLVHSAVPVGLH*APGPSRPRPHPRPA Trigger: AGCTGGGCGAGGATGAGGACGAGGACGAGATGGACCTGGAGCCCAATGAAGTCCGACTGGAACAGCAGAGTGTACCAGCTGCTGTGTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | CAATCATGCTCTCCTCAAACTGGGCGTAGCTGTCGAACACCTGGGTaGAGTCCCGCACGGTCATCACCGTGCGGATGGCCTCCTCATACA | + |
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Preference number: 5 (lower is better) Translates to: QSCSPQTGRSCRTPG*SPARSSPCGWPPHT Trigger: TGTATGAGGAGGCCATCCGCACGGTGATGACCGTGCGGGACTTCACCCAGGTGTTCGACAGCTACGCCCAGTTTGAGGAGAGCATGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | CGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTTGGTTaGCTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: RGYAQVQDSVIHGLG*LESAQAFLQVGKHG Trigger: TCCATGCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | TCTCCTCAGGGTTGGCCTGCTGAGCCAGCTCTGCCAATTCCTCCCTaGATGCATCACTCCTCACAAAGAAGATCTTGCTCTGGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPQGWPAEPALPIPP*MHHSSQRRSCSGPW Trigger: CCAGGGCCCAGAGCAAGATCTTCTTTGTGAGGAGTGATGCATCCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCCAACCCTGAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS-3UTR CAA 90 bp | TCAAAGGTGCGGCGGGTATGTGTTACCCTTCCCTGGTCCATGAGAAACTGGCAGCACAGGGAGGGCCATTaGCACCTGCAGGGAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKVRRVCVTLPWSMRNWQHREGH*HLQGSS Trigger: ACTGCTTCCCTGCAGGTGCAAATGGCCCTCCCTGTG...CTGCCAGTTTCTCATGGACCAGGGAAGGGTAACACATACCCGCCGCACCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS TCA 90 bp | AGAGATCCCGTGCACGCTCCAGCTTTCGGCCCCCATAGCGCGAGATaGATTTGGTCAGGTAGGTGCTCCAGATGTCTGAAACATTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDPVHAPAFGPHSAR*IWSGRCSRCLKHWA Trigger: GGCCCAATGTTTCAGACATCTGGAGCACCTACCTGACCAAATTCATCTCGCGCTATGGGGGCCGAAAGCTGGAGCGTGCACGGGATCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CACAGTGTGTGGGGCTTGCCTGTGGCTTTGAAGGGGTCTACTGTTTaGACAGCCTCTGTGTATGTGTTGATAATCTCCCGAGGGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSVWGLPVALKGSTV*TASVYVLIISRGRP Trigger: GGGCCGCCCTCGGGAGATTATCAACACATACACAGAGGCTGTGCAAACAGTAGACCCCTTCAAAGCCACAGGCAAGCCCCACACACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CTCGCCCAGCTGGATCTCCTCAGGGTTGGCCTGCTGAGCCAGCTCTaGCAATTCCTCCCTGGATGCATCACTCCTCACAAAGAAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAQLDLLRVGLLSQL*QFLPGCITPHKEDL Trigger: AAGATCTTCTTTGTGAGGAGTGATGCATCCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCCAACCCTGAGGAGATCCAGCTGGGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | TGGCTTTCCGCAGCAGCTTTAAGGCCTCATCGTAATTCTCGTGCCTaGGCTCTAGCTCCCCACACTGGCACCACACACTTGCCAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WLSAAALRPHRNSRA*ALAPHTGTTHLPGH Trigger: ATGACCTGGCAAGTGTGTGGTGCCAGTGTGGGGAGCTAGAGCTCAGGCACGAGAATTACGATGAGGCCTTAAAGCTGCTGCGGAAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | GGACCACACCTTCAGCGACTTATATACACGGTTCTGCACAGGTTCTaGACCATCAAAGTACTCAGCTCGGCGGGCAGGCAAAGCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPHLQRLIYTVLHRF*TIKVLSSAGRQSRG Trigger: GCCACGGCTTTGCCTGCCCGCCGAGCTGAGTACTTTGATGGTTCAGAACCTGTGCAGAACCGTGTATATAAGTCGCTGAAGGTGTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CACATCCCGAGCCTTTTCGAAGTGGCCACTGCGGATATAGTAGTCTaGCAAAGAGCACCACAGCTTGCCCAGCTGGTCAGTGAAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HIPSLFEVATADIVV*QRAPQLAQLVSETG Trigger: ACCCGTTTCACTGACCAGCTGGGCAAGCTGTGGTGCTCTTTGGCAGACTACTATATCCGCAGTGGCCACTTCGAAAAGGCTCGGGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS GCA 90 bp | TCTAGCTCCCCACACTGGCACCACACACTTGCCAGGTCATCCACCTaGTTGAAGTTCACCTTGGTGGCCTTCTCTAGGATGACACGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPHWHHTLARSST*LKFTLVAFSRMTRA Trigger: TGCTCGTGTCATCCTAGAGAAGGCCACCAAGGTGAACTTCAAGCAGGTGGATGACCTGGCAAGTGTGTGGTGCCAGTGTGGGGAGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | ATATTTTGGTGGGCAGCCATCGAGTGCCTGCTCAAAGAGATCCCGTaGACGCTCCAGCTTTCGGCCCCCATAGCGCGAGATGAATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IFWWAAIECLLKEIP*TLQLSAPIARDEFG Trigger: ACCAAATTCATCTCGCGCTATGGGGGCCGAAAGCTGGAGCGTGCACGGGATCTCTTTGAGCAGGCACTCGATGGCTGCCCACCAAAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CTTGATGTAGATGTTAAACATGTCGTACTGCTGTGCTGGCTCCACTaGCCTGGTCGCACGGTCATACACAGCCATGGCATGGCGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDVDVKHVVLLCWLH*PGRTVIHSHGMAGK Trigger: CTTGCCCGCCATGCCATGGCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATCTACATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CTCAGCAGCTCGCTTGATGTAGATGTTAAACATGTCGTACTGCTGTaGTGGCTCCACTGCCCTGGTCGCACGGTCATACACAGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLDVDVKHVVLL*WLHCPGRTVIHSHG Trigger: GCCATGGCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATCTACATCAAGCGAGCTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS-3UTR CAA 90 bp | GTCCGGATTCTGGGAGATAAGGTCACACAGCTCGTGCCACAGCTGGTAGTTGGACTGCAGGGAAGCAGTTaGAGTGCCCGCTCATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VRILGDKVTQLVPQLVVGLQGSS*SARSYN Trigger: GTTGTATGAGCGGGCACTCAAACTGCTTCCCTGCAG...TCCAACTACCAGCTGTGGCACGAGCTGTGTGACCTTATCTCCCAGAATCCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS TCA 90 bp | GCACTGCCCGACACCTTGAGCATCTGTGAAGCCATGAAGTTGACCTaGGTATTGTATGTGGCCTGCACACTCCGCCGTATCCTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ALPDTLSICEAMKLT*VLYVACTLRRILSI Trigger: GATGCTGAGGATACGGCGGAGTGTGCAGGCCACATACAATACTCAGGTCAACTTCATGGCTTCACAGATGCTCAAGGTGTCGGGCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | GTCAGACACGGTGCCTGTGGCACTGCCCGACACCTTGAGCATCTGTaGAGCCATGAAGTTGACCTGAGTATTGTATGTGGCCTGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: VRHGACGTARHLEHL*SHEVDLSIVCGLHT Trigger: AGTGTGCAGGCCACATACAATACTCAGGTCAACTTCATGGCTTCACAGATGCTCAAGGTGTCGGGCAGTGCCACAGGCACCGTGTCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | ATAGGCAGGATCAGTCACACAGCGATGTTTCACCTGTGCCCGGCGTaGCTTCAGATATCGGTACCAGAGTTTGTAGCTGCAGGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IGRISHTAMFHLCPA*LQISVPEFVAAGKQ Trigger: CTGCTTCCCTGCAGCTACAAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGATCCTGCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS GCA 90 bp | TCGGCAAGCATGGACCACACCTTCAGCGACTTATATACACGGTTCTaGACAGGTTCTGAACCATCAAAGTACTCAGCTCGGCGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASMDHTFSDLYTRF*TGSEPSKYSARRAG Trigger: GCCTGCCCGCCGAGCTGAGTACTTTGATGGTTCAGAACCTGTGCAGAACCGTGTATATAAGTCGCTGAAGGTGTGGTCCATGCTTGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | ATGGTATCCTCATTGCCGTGCCGAACCTCAAAGTCCTTCCATGTTTaGCAGAATGCCCCAGTTGTCCGGGGATCACAGATCTGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVSSLPCRTSKSFHV*QNAPVVRGSQIWEQ Trigger: CTGCTCCCAGATCTGTGATCCCCGGACAACTGGGGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | CTCCGCCGTATCCTCAGCATCTCCCTGATGGTATCCTCATTGCCGTaGCGAACCTCAAAGTCCTTCCATGTTTGCCAGAATGCCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRRILSISLMVSSLP*RTSKSFHVCQNAPV Trigger: AACTGGGGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGATACGGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | AGCAGCTCGCTTGATGTAGATGTTAAACATGTCGTACTGCTGTGCTaGCTCCACTGCCCTGGTCGCACGGTCATACACAGCCATGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLDVDVKHVVLLC*LHCPGRTVIHSHGM Trigger: CATGCCATGGCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATCTACATCAAGCGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 90 bp | TATTGTATGTGGCCTGCACACTCCGCCGTATCCTCAGCATCTCCCTaGTGGTATCCTCATTGCCGTGCCGAACCTCAAAGTCCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YCMWPAHSAVSSASP*WYPHCRAEPQSPSM Trigger: CATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGATACGGCGGAGTGTGCAGGCCACATACAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 90 bp | GACATCTTCATAGGCAGGATCAGTCACACAGCGATGTTTCACCTGTaGCCGGCGTGCCTTCAGATATCGGTACCAGAGTTTGTAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DIFIGRISHTAMFHL*PACLQISVPEFVAA Trigger: TGCAGCTACAAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGATCCTGCCTATGAAGATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS CCA 90 bp | TGGTTGACTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGCATaGACCACACCTTCAGCGACTTATATACACGGTTCTGCACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLTGKCPGFPPSRQA*TTPSATYIHGSAQV Trigger: AACCTGTGCAGAACCGTGTATATAAGTCGCTGAAGGTGTGGTCCATGCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 90 bp | GTACTTGTGCTCCTCCAGGAACATGGCATAGTTAATAACGATCTGTaGCGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLVLLQEHGIVNNDL*RGYAQVQDSVIHGL Trigger: AAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGCCACGCCACAGATCGTTATTAACTATGCCATGTTCCTGGAGGAGCACAAGTAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CGTCCTCATCCTCGCCCAGCTGGATCTCCTCAGGGTTaGCCTGCTGAGCCAGCTCTGCCAATTCCTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPHPRPAGSPQG*PAEPALPIPPW Trigger: CCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCCAACCCTGAGGAGATCCAGCTGGGCGAGGATGAGGACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | TGCCACTCGTGGACGTGGTGTGGGTTCTGGCGCAGAAGGACACTATaGAGAAGCAGGGGCCGTCGGCTGATGAGCTGTTCGAAGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CHSWTWCGFWRRRTL*RSRGRRLMSCSKRA Trigger: GGCCCGCTTCGAACAGCTCATCAGCCGACGGCCCCTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCACGAGTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | TGGGCAGCCATCGAGTGCCTGCTCAAAGAGATCCCGTaGACGCTCCAGCTTTCGGCCCCCATAGCGCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WAAIECLLKEIP*TLQLSAPIARD Trigger: ATCTCGCGCTATGGGGGCCGAAAGCTGGAGCGTGCACGGGATCTCTTTGAGCAGGCACTCGATGGCTGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | TCTCCTCAAACTGGGCGTAGCTGTCGAACACCTGGGTaGAGTCCCGCACGGTCATCACCGTGCGGATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPQTGRSCRTPG*SPARSSPCGWP Trigger: AGGCCATCCGCACGGTGATGACCGTGCGGGACTTCACCCAGGTGTTCGACAGCTACGCCCAGTTTGAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | TCCGGGGATCACAGATCTGGGAGCAGAAGCTGTAGATaGCCCGGGCGCGGTCGATTTCACCGAGCTTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: SGDHRSGSRSCR*PGRGRFHRACT Trigger: AGTGCAAGCTCGGTGAAATCGACCGCGCCCGGGCCATCTACAGCTTCTGCTCCCAGATCTGTGATCCCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | CCGAACACAGCAGCTGGTACACTCTGCTGTTCCAGTCGGACTTCATaGGGCTCCAGGTCCATCTCGTCCTCGTCCTCATCCTCGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PNTAAGTLCCSSRTS*GSRSISSSSSSSPS Trigger: GCTGGGCGAGGATGAGGACGAGGACGAGATGGACCTGGAGCCCAATGAAGTCCGACTGGAACAGCAGAGTGTACCAGCTGCTGTGTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | GCGCAGGTCCAGGATTCGGTCATACACGGCCTTGGTTaGCTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQVQDSVIHGLG*LESAQAFLQVG Trigger: GCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GGCGCGGTCGATTTCACCGAGCTTGCACTCCATGTCTaGAAACCGCAGGCACATCTCACGGGCATGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GAVDFTELALHV*KPQAHLTGMLI Trigger: GATGAGCATGCCCGTGAGATGTGCCTGCGGTTTGCAGACATGGAGTGCAAGCTCGGTGAAATCGACCGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | TGTAGATGGCCCGGGCGCGGTCGATTTCACCGAGCTTaGACTCCATGTCTGCAAACCGCAGGCACATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRWPGRGRFHRA*TPCLQTAGTSH Trigger: GTGAGATGTGCCTGCGGTTTGCAGACATGGAGTGCAAGCTCGGTGAAATCGACCGCGCCCGGGCCATCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | CTCTGTTCCAGCAGCTTCATGTCATCCATGCCACTCTaGCCAGGAGCCAGGTCAGACACGGTGCCTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LCSSSFMSSMPL*PGARSDTVPVA Trigger: TGCCACAGGCACCGTGTCTGACCTGGCTCCTGGGCAGAGTGGCATGGATGACATGAAGCTGCTGGAACAGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | ACACGCTTGTGCCACTCGTGGACGTGGTGTGGGTTCTaGCGCAGAAGGACACTATTGAGAAGCAGGGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TRLCHSWTWCGF*RRRTLLRSRGR Trigger: ACGGCCCCTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCACGAGTGGCACAAGCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | TGGACGTGGTGTGGGTTCTGGCGCAGAAGGACACTATaGAGAAGCAGGGGCCGTCGGCTGATGAGCTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: WTWCGFWRRRTL*RSRGRRLMSCS Trigger: CGAACAGCTCATCAGCCGACGGCCCCTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | CACAGGGAGGGCCATTTGCACCTGCAGGGAAGCAGTTaGAGTGCCCGCTCATACAACTGGTTGAGTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HREGHLHLQGSS*SARSYNWLSRG Trigger: GCCCCGACTCAACCAGTTGTATGAGCGGGCACTCAAACTGCTTCCCTGCAGGTGCAAATGGCCCTCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159235.2 |
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| CDS CAA 90 bp | GCGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTTGGTaGACTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AWLCAGPGFGHTRPW*TGKCPGFPPSRQAW Trigger: CCATGCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGCCACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | TGTGGCGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTaGGTTGACTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CGVAMRRSRIRSYTA*VDWKVPRLSSKSAS Trigger: GCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGCCACGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | TCTGTGTATGTGTTGATAATCTCCCGAGGGCGGCCCTaGTGGAGGGCTACACGCTTGTGCCACTCGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SVYVLIISRGRP*WRATRLCHSWT Trigger: CGTCCACGAGTGGCACAAGCGTGTAGCCCTCCATCAGGGCCGCCCTCGGGAGATTATCAACACATACACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | GAGGGCTACACGCTTGTGCCACTCGTGGACGTGGTGTaGGTTCTGGCGCAGAAGGACACTATTGAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGYTLVPLVDVV*VLAQKDTIEKQ Trigger: CTGCTTCTCAATAGTGTCCTTCTGCGCCAGAACCCACACCACGTCCACGAGTGGCACAAGCGTGTAGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | TGCGCAGGTCCAGGATTCGGTCATACACGGCCTTGGTaGACTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CAGPGFGHTRPW*TGKCPGFPPSR Trigger: CCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | GCAGCTGGTACACTCTGCTGTTCCAGTCGGACTTCATaGGGCTCCAGGTCCATCTCGTCCTCGTCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGTLCCSSRTS*GSRSISSSSSS Trigger: GGATGAGGACGAGGACGAGATGGACCTGGAGCCCAATGAAGTCCGACTGGAACAGCAGAGTGTACCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | TGGCCTGCACACTCCGCCGTATCCTCAGCATCTCCCTaGTGGTATCCTCATTGCCGTGCCGAACCTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WPAHSAVSSASP*WYPHCRAEPQS Trigger: ACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGATACGGCGGAGTGTGCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | CTCACGCCCCAGTTCAGAGGCAGTCTCCATCTTCGCTaGAATCATGCTCTCCTCAAACTGGGCGTAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LTPQFRGSLHLR*NHALLKLGVAV Trigger: GACAGCTACGCCCAGTTTGAGGAGAGCATGATTGCAGCGAAGATGGAGACTGCCTCTGAACTGGGGCGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GGATTCGGTCATACACGGCCTTGGTTGACTGGAAAGTaGCCAGGCTTTCCTCCAAGTCGGCAAGCATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GFGHTRPWLTGK*PGFPPSRQAWT Trigger: GGTCCATGCTTGCCGACTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GTCTTGGCATATTTTGGTGGGCAGCCATCGAGTGCCTaGTCAAAGAGATCCCGTGCACGCTCCAGCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLAYFGGQPSSA*SKRSRARSSFR Trigger: CCGAAAGCTGGAGCGTGCACGGGATCTCTTTGAGCAGGCACTCGATGGCTGCCCACCAAAATATGCCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GGCCTGCTGAGCCAGCTCTGCCAATTCCTCCCTGGATaGATCACTCCTCACAAAGAAGATCTTGCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLSQLCQFLPG*ITPHKEDLALG Trigger: GCCCAGAGCAAGATCTTCTTTGTGAGGAGTGATGCATCCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | CTGGATCTCCTCAGGGTTGGCCTGCTGAGCCAGCTCTaGCAATTCCTCCCTGGATGCATCACTCCTCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LDLLRVGLLSQL*QFLPGCITPHK Trigger: TTTGTGAGGAGTGATGCATCCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCCAACCCTGAGGAGATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CAGCTGGTACACTCTGCTGTTCCAGTCGGACTTCATTaGGCTCCAGGTCCATCTCGTCCTCGTCCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: QLVHSAVPVGLH*APGPSRPRPHP Trigger: AGGATGAGGACGAGGACGAGATGGACCTGGAGCCCAATGAAGTCCGACTGGAACAGCAGAGTGTACCAGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | GCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTaGGTTGACTGGAAAGTGCCCAGGCTTTCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: AMRRSRIRSYTA*VDWKVPRLSSK Trigger: CTTGGAGGAAAGCCTGGGCACTTTCCAGTCAACCAAGGCCGTGTATGACCGAATCCTGGACCTGCGCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | AGCTCCCCACACTGGCACCACACACTTGCCAGGTCATCCACCTGCTaGAAGTTCACCTTGGTGGCCTTCTCTAGGATGACACGAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: SSPHWHHTLARSSTC*KFTLVAFSRMTRAS Trigger: TGATGCTCGTGTCATCCTAGAGAAGGCCACCAAGGTGAACTTCAAGCAGGTGGATGACCTGGCAAGTGTGTGGTGCCAGTGTGGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | GCAGCAGCTTTAAGGCCTCATCGTAATTCTCGTGCCTaGGCTCTAGCTCCCCACACTGGCACCACACACTTG | + |
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Preference number: 6 (lower is better) Translates to: AAALRPHRNSRA*ALAPHTGTTHL Trigger: CAAGTGTGTGGTGCCAGTGTGGGGAGCTAGAGCTCAGGCACGAGAATTACGATGAGGCCTTAAAGCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | GTGCACGCTCCAGCTTTCGGCCCCCATAGCGCGAGATaGATTTGGTCAGGTAGGTGCTCCAGATGTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VHAPAFGPHSAR*IWSGRCSRCLK Trigger: TTTCAGACATCTGGAGCACCTACCTGACCAAATTCATCTCGCGCTATGGGGGCCGAAAGCTGGAGCGTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GTACCAGAGTTTGTAGCTGCAGGGAAGCAGTTTGAGTaGCCGCTCATACAACTGGTTGAGTCGGGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VPEFVAAGKQFE*PLIQLVESGLG Trigger: CCCAAGCCCCGACTCAACCAGTTGTATGAGCGGGCACTCAAACTGCTTCCCTGCAGCTACAAACTCTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS GCA 72 bp | GATGTTAAACATGTCGTACTGCTGTGCTGGCTCCACTaGCCTGGTCGCACGGTCATACACAGCCATGGCATG | + |
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Preference number: 6 (lower is better) Translates to: DVKHVVLLCWLH*PGRTVIHSHGM Trigger: CATGCCATGGCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | GTGCCGAACCTCAAAGTCCTTCCATGTTTGCCAGAATaGCCCAGTTGTCCGGGGATCACAGATCTGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPNLKVLPCLPE*PSCPGITDLGA Trigger: TGCTCCCAGATCTGTGATCCCCGGACAACTGGGGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CATCAAAGTACTCAGCTCGGCGGGCAGGCAAAGCCGTaGCTTTCCGCAGCAGCTTTAAGGCCTCATCGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HQSTQLGGQAKP*LSAAALRPHRN Trigger: ATTACGATGAGGCCTTAAAGCTGCTGCGGAAAGCCACGGCTTTGCCTGCCCGCCGAGCTGAGTACTTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | TGGCACCACACACTTGCCAGGTCATCCACCTGCTTGAAGTTCACCTaGGTGGCCTTCTCTAGGATGACACGAGCATCATCCAGCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WHHTLARSSTCLKFT*VAFSRMTRASSSCP Trigger: TGGACAGCTGGATGATGCTCGTGTCATCCTAGAGAAGGCCACCAAGGTGAACTTCAAGCAGGTGGATGACCTGGCAAGTGTGTGGTGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | GATGGTATCCTCATTGCCGTGCCGAACCTCAAAGTCCTTCCATGTTaGCCAGAATGCCCCAGTTGTCCGGGGATCACAGATCTGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DGILIAVPNLKVLPC*PECPSCPGITDLGA Trigger: TGCTCCCAGATCTGTGATCCCCGGACAACTGGGGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | TGCACACTCCGCCGTATCCTCAGCATCTCCCTGATGGTATCCTCATaGCCGTGCCGAACCTCAAAGTCCTTCCATGTTTGCCAGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: CTLRRILSISLMVSS*PCRTSKSFHVCQNA Trigger: GGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGATACGGCGGAGTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | ATGCAACCCACAGTGTGTGGGGCTTGCCTGTGGCTTTaGAGGGGTCTACTGTTTGCACAGCCTCTGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: MQPTVCGACLWL*RGLLFAQPLCM Trigger: CATACACAGAGGCTGTGCAAACAGTAGACCCCTTCAAAGCCACAGGCAAGCCCCACACACTGTGGGTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | GGTGCCTGTGGCACTGCCCGACACCTTGAGCATCTGTaGAGCCATGAAGTTGACCTGAGTATTGTATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GACGTARHLEHL*SHEVDLSIVCG Trigger: GCCACATACAATACTCAGGTCAACTTCATGGCTTCACAGATGCTCAAGGTGTCGGGCAGTGCCACAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | TCATTGCCGTGCCGAACCTCAAAGTCCTTCCATGTTTaGCAGAATGCCCCAGTTGTCCGGGGATCACAGATC | + |
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Preference number: 6 (lower is better) Translates to: SLPCRTSKSFHV*QNAPVVRGSQI Trigger: GATCTGTGATCCCCGGACAACTGGGGCATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | GGTTGGCCTGCTGAGCCAGCTCTGCCAATTCCTCCCTaGATGCATCACTCCTCACAAAGAAGATCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GWPAEPALPIPP*MHHSSQRRSCS Trigger: AGAGCAAGATCTTCTTTGTGAGGAGTGATGCATCCAGGGAGGAATTGGCAGAGCTGGCTCAGCAGGCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | CACTGGCACCACACACTTGCCAGGTCATCCACCTGCTaGAAGTTCACCTTGGTGGCCTTCTCTAGGATGACA | + |
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Preference number: 6 (lower is better) Translates to: HWHHTLARSSTC*KFTLVAFSRMT Trigger: TGTCATCCTAGAGAAGGCCACCAAGGTGAACTTCAAGCAGGTGGATGACCTGGCAAGTGTGTGGTGCCAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | CGCCGTATCCTCAGCATCTCCCTGATGGTATCCTCATaGCCGTGCCGAACCTCAAAGTCCTTCCATGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RRILSISLMVSS*PCRTSKSFHVC Trigger: GCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGATACGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | ATCAGTCACACAGCGATGTTTCACCTGTGCCCGGCGTaGCTTCAGATATCGGTACCAGAGTTTGTAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ISHTAMFHLCPA*LQISVPEFVAA Trigger: TGCAGCTACAAACTCTGGTACCGATATCTGAAGGCACGCCGGGCACAGGTGAAACATCGCTGTGTGACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS GCA 72 bp | CCTCATACACATCCCGAGCCTTTTCGAAGTGGCCACTaGGGATATAGTAGTCTGCCAAAGAGCACCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PHTHPEPFRSGH*GYSSLPKSTTA Trigger: AGCTGTGGTGCTCTTTGGCAGACTACTATATCCGCAGTGGCCACTTCGAAAAGGCTCGGGATGTGTATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019614.13 ENSMUST00000159548.2 |
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| CDS GCA 72 bp | TCGCTTGATGTAGATGTTAAACATGTCGTACTGCTGTaGTGGCTCCACTGCCCTGGTCGCACGGTCATACAC | + |
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Preference number: 6 (lower is better) Translates to: SLDVDVKHVVLL*WLHCPGRTVIH Trigger: GTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATCTACATCAAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | GAGCATCATCCAGCTGTCCATTGTCTTCGTAAAACTTaGCGAATGCAACCCACAGTGTGTGGGGCTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EHHPAVHCLRKT*RMQPTVCGACL Trigger: CAGGCAAGCCCCACACACTGTGGGTTGCATTCGCCAAGTTTTACGAAGACAATGGACAGCTGGATGATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CTTGATGTAGATGTTAAACATGTCGTACTGCTGTGCTaGCTCCACTGCCCTGGTCGCACGGTCATACACAGC | + |
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Preference number: 6 (lower is better) Translates to: LDVDVKHVVLLC*LHCPGRTVIHS Trigger: GCTGTGTATGACCGTGCGACCAGGGCAGTGGAGCCAGCACAGCAGTACGACATGTTTAACATCTACATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | ACACTTGCCAGGTCATCCACCTGCTTGAAGTTCACCTaGGTGGCCTTCTCTAGGATGACACGAGCATCATCC | + |
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Preference number: 6 (lower is better) Translates to: TLARSSTCLKFT*VAFSRMTRASS Trigger: GGATGATGCTCGTGTCATCCTAGAGAAGGCCACCAAGGTGAACTTCAAGCAGGTGGATGACCTGGCAAGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 90 bp | AACTTGGCGAATGCAACCCACAGTGTGTGGGGCTTGCCTGTGGCTTaGAAGGGGTCTACTGTTTGCACAGCCTCTGTGTATGTGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: NLANATHSVWGLPVA*KGSTVCTASVYVLI Trigger: TATCAACACATACACAGAGGCTGTGCAAACAGTAGACCCCTTCAAAGCCACAGGCAAGCCCCACACACTGTGGGTTGCATTCGCCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | CTTCAGCGACTTATATACACGGTTCTGCACAGGTTCTaGACCATCAAAGTACTCAGCTCGGCGGGCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LQRLIYTVLHRF*TIKVLSSAGRQ Trigger: TTGCCTGCCCGCCGAGCTGAGTACTTTGATGGTTCAGAACCTGTGCAGAACCGTGTATATAAGTCGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS TCA 72 bp | GACACCTTGAGCATCTGTGAAGCCATGAAGTTGACCTaGGTATTGTATGTGGCCTGCACACTCCGCCGTATC | + |
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Preference number: 6 (lower is better) Translates to: DTLSICEAMKLT*VLYVACTLRRI Trigger: GATACGGCGGAGTGTGCAGGCCACATACAATACTCAGGTCAACTTCATGGCTTCACAGATGCTCAAGGTGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | TGGGGCTTGCCTGTGGCTTTGAAGGGGTCTACTGTTTaGACAGCCTCTGTGTATGTGTTGATAATCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: WGLPVALKGSTV*TASVYVLIISR Trigger: TCGGGAGATTATCAACACATACACAGAGGCTGTGCAAACAGTAGACCCCTTCAAAGCCACAGGCAAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | ATCCAGCTGTCCATTGTCTTCGTAAAACTTGGCGAATaGAACCCACAGTGTGTGGGGCTTGCCTGTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: IQLSIVFVKLGE*NPQCVGLACGF Trigger: AAAGCCACAGGCAAGCCCCACACACTGTGGGTTGCATTCGCCAAGTTTTACGAAGACAATGGACAGCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CTCCTCCAGGAACATGGCATAGTTAATAACGATCTGTaGCGTGGCTATGCGCAGGTCCAGGATTCGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: LLQEHGIVNNDL*RGYAQVQDSVI Trigger: TATGACCGAATCCTGGACCTGCGCATAGCCACGCCACAGATCGTTATTAACTATGCCATGTTCCTGGAGGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CCA 72 bp | CCTTGTCCGGATTCTGGTAGTTGGATTTACCAGCCTTaGATACAAAGCGCTCATCATTCACCACGGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PCPDSGSWIYQP*IQSAHHSPRWP Trigger: TGGCCACCGTGGTGAATGATGAGCGCTTTGTATCCAAGGCTGGTAAATCCAACTACCAGAATCCGGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159548.2 |
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| CDS GCA 72 bp | ATCCTCAGCATCTCCCTGATGGTATCCTCATTGCCGTaGCGAACCTCAAAGTCCTTCCATGTTTGCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: ILSISLMVSSLP*RTSKSFHVCQN Trigger: ATTCTGGCAAACATGGAAGGACTTTGAGGTTCGGCACGGCAATGAGGATACCATCAGGGAGATGCTGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS CAA 72 bp | GCTGTGCGTAGAGCAGGTATAAAGTCTTGGCATATTTaGGTGGGCAGCCATCGAGTGCCTGCTCAAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVRRAGIKSWHI*VGSHRVPAQRD Trigger: ATCTCTTTGAGCAGGCACTCGATGGCTGCCCACCAAAATATGCCAAGACTTTATACCTGCTCTACGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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| CDS GCA 72 bp | ATGGACCACACCTTCAGCGACTTATATACACGGTTCTaGACAGGTTCTGAACCATCAAAGTACTCAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: MDHTFSDLYTRF*TGSEPSKYSAR Trigger: CCGAGCTGAGTACTTTGATGGTTCAGAACCTGTGCAGAACCGTGTATATAAGTCGCTGAAGGTGTGGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019614.13 |
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