Pregenerated sensors for WWTR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027803Ensembl transcript IDs: ENSMUST00000029380.14, ENSMUST00000120977.2
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCTGGCCTTTCCGCCACCTTCCCTGGCTCTGCTACTTTGCCTCTaGCCTTTCAACTTGCCTCTTCCCACCAAGATCAAATGTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: HLAFPPPSLALLLCL*PFNLPLPTKIKCTL Trigger: CAGAGTACATTTGATCTTGGTGGGAAGAGGCAAGTTGAAAGGTCAGAGGCAAAGTAGCAGAGCCAGGGAAGGTGGCGGAAAGGCCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR GCA 90 bp | GAACCACTGAGAGACTGCTCTGAGGGCTGGAGATGGCGCTCCACTTaGACACATGAACTCTTGAGTTCACTCAGAACTAGGGGGAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: EPLRDCSEGWRWRST*THELLSSLRTRGKK Trigger: CTTTTTCCCCCTAGTTCTGAGTGAACTCAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCCCTCAGAGCAGTCTCTCAGTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR TCA 90 bp | GGGGCACTTCTCACACGTCTTGCTTGCCTTGTCTTTGAGGGGTTCTaGCATGTCTACTTAATTTCACATCACCTGGCCTTTCCGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: GALLTRLACLVFEGF*HVYLISHHLAFPPP Trigger: AGGTGGCGGAAAGGCCAGGTGATGTGAAATTAAGTAGACATGTCAGAACCCCTCAAAGACAAGGCAAGCAAGACGTGTGAGAAGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR TCA 90 bp | AGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATaGAGCTCTCGGTCCTTAAAAGCTAACGAAACAAATAATATGTTG | + |
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Preference number: 1 (lower is better) Translates to: RTSLPSAGGLPARGT*SSRSLKANETNNML Trigger: CAACATATTATTTGTTTCGTTAGCTTTTAAGGACCGAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR TCA 90 bp | GGAGCACTTTGGGGCACTTCTCACACGTCTTGCTTGCCTTGTCTTTaGGGGGTTCTGACATGTCTACTTAATTTCACATCACCTGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: GALWGTSHTSCLPCL*GVLTCLLNFTSPGL Trigger: AAGGCCAGGTGATGTGAAATTAAGTAGACATGTCAGAACCCCTCAAAGACAAGGCAAGCAAGACGTGTGAGAAGTGCCCCAAAGTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR CCA 90 bp | TATAACAGCAAAGAACCACTGAGAGACTGCTCTGAGGGCTGGAGATaGCGCTCCACTTGCACACATGAACTCTTGAGTTCACTCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: YNSKEPLRDCSEGWR*RSTCTHELLSSLRT Trigger: AGTTCTGAGTGAACTCAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCCCTCAGAGCAGTCTCTCAGTGGTTCTTTGCTGTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR GCA 90 bp | CTGCTAAGCAGGAAAATGATGAACGGTGGCAACATTGGTACTCTGTaGCCTTGTAAACACAGAATGAGAGAAGCCATCAGAGCCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: LLSRKMMNGGNIGTL*PCKHRMREAIRASM Trigger: CATGCTGGCTCTGATGGCTTCTCTCATTCTGTGTTTACAAGGGCACAGAGTACCAATGTTGCCACCGTTCATCATTTTCCTGCTTAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR TCA 90 bp | GTGACCAAACTGGTCTCTTTCACACGATCTGTCATGCAAGAATTGTaGCAGATGTTGAAGTTACTCTCCTGCTCACAGAATGGAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: VTKLVSFTRSVMQEL*QMLKLLSCSQNGAA Trigger: AGCAGCTCCATTCTGTGAGCAGGAGAGTAACTTCAACATCTGTCACAATTCTTGCATGACAGATCGTGTGAAAGAGACCAGTTTGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR TCA 90 bp | TGGTCTCTTTCACACGATCTGTCATGCAAGAATTGTGACAGATGTTaGAGTTACTCTCCTGCTCACAGAATGGAGCTGCTAAGCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: WSLSHDLSCKNCDRC*SYSPAHRMELLSRK Trigger: TTTCCTGCTTAGCAGCTCCATTCTGTGAGCAGGAGAGTAACTTCAACATCTGTCACAATTCTTGCATGACAGATCGTGTGAAAGAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR GCA 90 bp | ATAGGGCTGCAGACATTCTCTAAAGTCATTCTGCACAACCCATCCTaGTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAATGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: IGLQTFSKVILHNPS*FICHRNAGLQKMKR Trigger: TCTTTTCATTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAATGACTTTAGAGAATGTCTGCAGCCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR GCA 90 bp | TTAGAAAATATTAATACTTATAACAGCAAAGAACCACTGAGAGACTaGTCTGAGGGCTGGAGATGGCGCTCCACTTGCACACATGAACTC | + |
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Preference number: 1 (lower is better) Translates to: LENINTYNSKEPLRD*SEGWRWRSTCTHEL Trigger: GAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCCCTCAGAGCAGTCTCTCAGTGGTTCTTTGCTGTTATAAGTATTAATATTTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR GCA 90 bp | CAGACATTCTCTAAAGTCATTCTGCACAACCCATCCTGCTTTATCTaGCACAGAAATGCAGGCTTGCAGAAAATGAAAAGAGAGTATTTA | + |
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Preference number: 1 (lower is better) Translates to: QTFSKVILHNPSCFI*HRNAGLQKMKREYL Trigger: TAAATACTCTCTTTTCATTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAATGACTTTAGAGAATGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR CCA 90 bp | TTGAAGTGCTCAGAGAGAGAGCAAGGAATTAACGTGGACATAAATTaGGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LKCSEREQGINVDIN*GSFRKREITLRVLK Trigger: TTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCCCAATTTATGTCCACGTTAATTCCTTGCTCTCTCTCTGAGCACTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR CCA 90 bp | TCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATACTaGATTATAATCAACAACACAGGTAAACGTTTATTTGGTAAAACG | + |
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Preference number: 1 (lower is better) Translates to: SSDGFGGTVPVCTTY*IIINNTGKRLFGKT Trigger: CGTTTTACCAAATAAACGTTTACCTGTGTTGTTGATTATAATCCAGTATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
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| 3UTR-3UTR GCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCCTTCCTGGACCAAGCTaGCTATCAGAATTCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: GRHCQVQAACLPEEHEALLPGPS*LSEFTA Trigger: GGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAG...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGCAAGTGCAGGCGGCCTaGCTGCCAGAGGAACATGAA | + |
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Preference number: 2 (lower is better) Translates to: HGQVTSPSADSFLLSNAQQVQAA*LPEEHE Trigger: TTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTG...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCAGGCTGCGACCTAGTTaGCCTGATGTTTTCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: GRHCQVQAACLPEEHEALRLRPS*PDVFRI Trigger: GATTCTGAAAACATCAGGCCAACTAGGTCGCAGCCT...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCCCATCAGAGCCAGCATaGATTCCAAACTACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: GRHCQVQAACLPEEHEALPSEPA*IPNYTV Trigger: TACAGTGTAGTTTGGAATCCATGCTGGCTCTGATGG...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGTGCACCCTGACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGTGCAGGCGGCCTGCCTaGCAGAGGAACATGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VKCTLTLFSLTAVSFGIKCRRPA*QRNMKL Trigger: GAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCA...CTTTATGCCAAAAGACACCGCTGTTAGAGAGAAGAGGGTCAGGGTGCACTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTTACAAAGGCAGAACGTaGTGCAGCTGCAGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPYKGRT*CSCRPA Trigger: AGCGGGCCTGCAGCTGCACCACGTTCTGCCTTTGTA...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGGCTGCAGGCCCGCTCTaGCTCATCACTTGGTCCGCA | + |
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Preference number: 2 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQAAGPL*LITWSA Trigger: TGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAGTGCACCCTGACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGTACAAAGGCAGAACGTaGTGCAGCTGCAGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: VKCTLTLFSLTAVSFGIKYKGRT*CSCRPA Trigger: AGCGGGCCTGCAGCTGCACCACGTTCTGCCTTTGTA...CTTTATGCCAAAAGACACCGCTGTTAGAGAGAAGAGGGTCAGGGTGCACTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGTGCTTGCCTTGTCTTTaGGGGGTTCTGACATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: HGQVTSPSADSFLLSNAQCLPCL*GVLTCL Trigger: TAGACATGTCAGAACCCCTCAAAGACAAGGCAAGCA...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCCCATCAGAGCCAGCATaGATTCCAAACTACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAPSEPA*IPNYTV Trigger: TACAGTGTAGTTTGGAATCCATGCTGGCTCTGATGG...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTCTTGTAAACACAGAATaGGAGAAGCCATCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPLVNTE*EKPSEP Trigger: TGGCTCTGATGGCTTCTCTCATTCTGTGTTTACAAG...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGTACCAGACTCTAGATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGCACACATGAACTCTTaGGTTCACTCAGAACTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TLYQTLDKMVSSDGFGGTAHMNS*VHSELG Trigger: CCCTAGTTCTGAGTGAACTCAAGAGTTCATGTGTGC...TGTGCCGCCAAATCCATCAGATGAAACCATTTTATCTAGAGTCTGGTACAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTCTTCCTGGACCAAGCTaGCTATCAGAATTCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: GFLQKKRDHFKSAESNSSLPGPS*LSEFTA Trigger: GGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAG...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTTCAGAATTCACTGCCTaGGGTCAGCTTTGTATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GFLQKKRDHFKSAESNSSSEFTA*GQLCMA Trigger: AGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGA...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGTGCACCCTGACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGGTCTTTGAGGGGTTCTaGCATGTCTACTTAATTTCA | + |
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Preference number: 2 (lower is better) Translates to: VKCTLTLFSLTAVSFGIKVFEGF*HVYLIS Trigger: TGAAATTAAGTAGACATGTCAGAACCCCTCAAAGAC...CTTTATGCCAAAAGACACCGCTGTTAGAGAGAAGAGGGTCAGGGTGCACTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTATATCTGCCACAGAAATaGAGGCTTGCAGAAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: WTKLPIRIHCLRSALYGLYLPQK*RLAENE Trigger: TTCATTTTCTGCAAGCCTGCATTTCTGTGGCAGATA...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGCCTATCAGAATTCACTaGCTGAGGTCAGCTTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSPIRIH*LRSALY Trigger: ATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGG...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGCACACAAAATTCATaGTTCATCAGGCTGCGACCT | + |
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Preference number: 2 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQSTQNS*FIRLRP Trigger: AGGTCGCAGCCTGATGAACCATGAATTTTGTGTGCT...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGTACCAGACTCTAGATAAAATGGTTTCATCTGATGGATTTGGCGGCACAAATTGTGACAGATGTTaGAGTTACTCTCCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: TLYQTLDKMVSSDGFGGTNCDRC*SYSPAH Trigger: GTGAGCAGGAGAGTAACTTCAACATCTGTCACAATT...TGTGCCGCCAAATCCATCAGATGAAACCATTTTATCTAGAGTCTGGTACAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGCTACAGCTCATGTCCTaGCGAGGGCCTTTCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: GKKVWLLALVFCNKPYFMLQLMS*RGPFCM Trigger: CATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAG...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTTTGAAGTTACTCTCCTaGTCACAGAATGGAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GFLQKKRDHFKSAESNSSLKLLS*SQNGAA Trigger: AGCAGCTCCATTCTGTGAGCAGGAGAGTAACTTCAA...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTAGCACACAAAATTCATaGTTCATCAGGCTGCGACCT | + |
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Preference number: 2 (lower is better) Translates to: GFLQKKRDHFKSAESNSSSTQNS*FIRLRP Trigger: AGGTCGCAGCCTGATGAACCATGAATTTTGTGTGCT...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGTATCTGCCACAGAAATaGAGGCTTGCAGAAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQYLPQK*RLAENE Trigger: TTCATTTTCTGCAAGCCTGCATTTCTGTGGCAGATA...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGTCAGAATTCACTGCCTaGGGTCAGCTTTGTATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GKKVWLLALVFCNKPYFMSEFTA*GQLCMA Trigger: AGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGA...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATCTTGTAAACACAGAATaGGAGAAGCCATCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHLVNTE*EKPSEP Trigger: TGGCTCTGATGGCTTCTCTCATTCTGTGTTTACAAG...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
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| 3UTR-3UTR GCA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCTTGAAGTTACTCTCCTaGTCACAGAATGGAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NNASEYKTAHKIHGSSGCLKLLS*SQNGAA Trigger: AGCAGCTCCATTCTGTGAGCAGGAGAGTAACTTCAA...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATCCTATCAGAATTCACTaGCTGAGGTCAGCTTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHPIRIH*LRSALY Trigger: ATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGG...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGTCTGACCTTTCAACTTaGCTCTTCCCACCAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: GKKVWLLALVFCNKPYFMSDLST*LFPPRS Trigger: TGATCTTGGTGGGAAGAGGCAAGTTGAAAGGTCAGA...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCAACATTGGTACTCTGTaGCCTTGTAAACACAGAATG | + |
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Preference number: 2 (lower is better) Translates to: NNASEYKTAHKIHGSSGCNIGTL*PCKHRM Trigger: CATTCTGTGTTTACAAGGGCACAGAGTACCAATGTT...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGTCACACGATCTGTCATaGAAGAATTGTGACAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: GKKVWLLALVFCNKPYFMSHDLS*KNCDRC Trigger: ACATCTGTCACAATTCTTGCATGACAGATCGTGTGA...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGGCGTTTCTATTTCAATaGATCAAAAGGGATCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: GKKVWLLALVFCNKPYFMAFLFQ*IKRDLT Trigger: AGTAAGATCCCTTTTGATCCATTGAAATAGAAACGC...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | CGTGGTGCAGCTGCAGGCCCGCTCTGCCTCATCACTTaGTCCGCAAGGCCCAAGACTCGCGTCAGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RGAAAGPLCLIT*SARPKTRVSSQ Trigger: CTGTGAGCTGACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGCTGCACCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | ACAAAGGCAGAACGTGGTGCAGCTGCAGGCCCGCTCTaGCTCATCACTTGGTCCGCAAGGCCCAAGACTCGC | + |
|
Preference number: 3 (lower is better) Translates to: TKAERGAAAGPL*LITWSARPKTR Trigger: GCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGCTGCACCACGTTCTGCCTTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | AAGGAGTGTGAGTACAAAGGCAGAACGTGGTGCAGCTaGAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KECEYKGRTWCS*RPALPHHLVRK Trigger: CTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGCTGCACCACGTTCTGCCTTTGTACTCACACTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | GTGACATGTCCATCACGGACAAGTCACGTCACCATCTaGAGATTCCTTTCTGCTGAGCAATGCCCAGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: VTCPSRTSHVTI*RFLSAEQCPGG Trigger: GCCGCCTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTGATGGACATGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | CACCCTGACCCTCTTCTCTCTAACAGCGGTGTCTTTTaGCATAAAGGCAGCGGAGCACTTTGGGGCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HPDPLLSNSGVF*HKGSGALWGTS Trigger: AGAAGTGCCCCAAAGTGCTCCGCTGCCTTTATGCCAAAAGACACCGCTGTTAGAGAGAAGAGGGTCAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | GCTGGAGATGGCGCTCCACTTGCACACATGAACTCTTaGGTTCACTCAGAACTAGGGGGAAAAAGGTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGDGAPLAHMNS*VHSELGGKRSG Trigger: GCCAGACCTTTTTCCCCCTAGTTCTGAGTGAACTCAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | GACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTaGGCAATGCCCAGGCGGCTGAGACTTATGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: DKSRHHLQIPFC*AMPRRLRLMHF Trigger: GAAGTGCATAAGTCTCAGCCGCCTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | AAGCAACAGCAGTCCATGTTCTCGTCTGCCAATACATaGACAATGTCACAGCCCCACTCCTTCCTCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KQQQSMFSSANT*TMSQPHSFLLC Trigger: GCAGAGGAGGAAGGAGTGGGGCTGTGACATTGTCCATGTATTGGCAGACGAGAACATGGACTGCTGTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | AACAGCAAAGAACCACTGAGAGACTGCTCTGAGGGCTaGAGATGGCGCTCCACTTGCACACATGAACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NSKEPLRDCSEG*RWRSTCTHELL Trigger: CAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCCCTCAGAGCAGTCTCTCAGTGGTTCTTTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGCACTTCTCACACGTCTaGCTTGCCTTGTCTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HGQVTSPSADSFLLSNAQHFSHV*LALSLR Trigger: CCTCAAAGACAAGGCAAGCAAGACGTGTGAGAAGTG...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | TTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATaGAGCTCTCGGTCCTTAAAAGCTAACGAAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPSAGGLPARGT*SSRSLKANETN Trigger: ATTTGTTTCGTTAGCTTTTAAGGACCGAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | TTTCCGCCACCTTCCCTGGCTCTGCTACTTTGCCTCTaGCCTTTCAACTTGCCTCTTCCCACCAAGATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPPPSLALLLCL*PFNLPLPTKIK Trigger: TTTGATCTTGGTGGGAAGAGGCAAGTTGAAAGGTCAGAGGCAAAGTAGCAGAGCCAGGGAAGGTGGCGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | AAAGAACCACTGAGAGACTGCTCTGAGGGCTGGAGATaGCGCTCCACTTGCACACATGAACTCTTGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KEPLRDCSEGWR*RSTCTHELLSS Trigger: TGAACTCAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCCCTCAGAGCAGTCTCTCAGTGGTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | AGAGTGCTGAAAGCAACAGCAGTCCATGTTCTCGTCTaGCAATACATGGACAATGTCACAGCCCCACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVLKATAVHVLV*QYMDNVTAPLL Trigger: AAGGAGTGGGGCTGTGACATTGTCCATGTATTGGCAGACGAGAACATGGACTGCTGTTGCTTTCAGCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | TGCGTTTCTATTTCAATGGATCAAAAGGGATCTTACTaGAGATCCTCAACCGAGAAGCCTTCACCCTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: CVSISMDQKGSY*RSSTEKPSPSR Trigger: CCGTGAGGGTGAAGGCTTCTCGGTTGAGGATCTTCAGTAAGATCCCTTTTGATCCATTGAAATAGAAACGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | CTCACACGTCTTGCTTGCCTTGTCTTTGAGGGGTTCTaGCATGTCTACTTAATTTCACATCACCTGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTRLACLVFEGF*HVYLISHHLAF Trigger: AAAGGCCAGGTGATGTGAAATTAAGTAGACATGTCAGAACCCCTCAAAGACAAGGCAAGCAAGACGTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | TGGGGCACTTCTCACACGTCTTGCTTGCCTTGTCTTTaGGGGGTTCTGACATGTCTACTTAATTTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: WGTSHTSCLPCL*GVLTCLLNFTS Trigger: TGATGTGAAATTAAGTAGACATGTCAGAACCCCTCAAAGACAAGGCAAGCAAGACGTGTGAGAAGTGCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | ATCACTTCCTGGACCAAGCTGCCTATCAGAATTCACTaGCTGAGGTCAGCTTTGTATGGCTTAGAATCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ITSWTKLPIRIH*LRSALYGLESV Trigger: AACTGATTCTAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | CAGACATTCTCTAAAGTCATTCTGCACAACCCATCCTaGTTTATCTGCCACAGAAATGCAGGCTTGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QTFSKVILHNPS*FICHRNAGLQK Trigger: TTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAATGACTTTAGAGAATGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | CTGGTCTCTTTCACACGATCTGTCATGCAAGAATTGTaGCAGATGTTGAAGTTACTCTCCTGCTCACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSFTRSVMQEL*QMLKLLSCSQN Trigger: ATTCTGTGAGCAGGAGAGTAACTTCAACATCTGTCACAATTCTTGCATGACAGATCGTGTGAAAGAGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR TCA 72 bp | GCCCAGGCGGCTGAGACTTATGCACTTCTTATGCACTaGGAAATCACTGAAAGAAATACACTTTATATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: AQAAETYALLMH*EITERNTLYIL Trigger: TAGGATATAAAGTGTATTTCTTTCAGTGATTTCTCAGTGCATAAGAAGTGCATAAGTCTCAGCCGCCTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | GCAATGCCCAGGCGGCTGAGACTTATGCACTTCTTATaGACTGAGAAATCACTGAAAGAAATACACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AMPRRLRLMHFL*TEKSLKEIHFI Trigger: TATAAAGTGTATTTCTTTCAGTGATTTCTCAGTGCATAAGAAGTGCATAAGTCTCAGCCGCCTGGGCATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | CTCTTGAGTTCACTCAGAACTAGGGGGAAAAAGGTCTaGCTTCTAGCTTTAGTGTTCTGTAACAAACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: LLSSLRTRGKKV*LLALVFCNKPY Trigger: ATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCCCCTAGTTCTGAGTGAACTCAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR GCA 72 bp | AACTTGCCTCTTCCCACCAAGATCAAATGTACTCTGTaGGTTTCTATTTCAATGGATCAAAAGGGATCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: NLPLPTKIKCTL*VSISMDQKGSY Trigger: GTAAGATCCCTTTTGATCCATTGAAATAGAAACGCACAGAGTACATTTGATCTTGGTGGGAAGAGGCAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | TCAGAGAGAGAGCAAGGAATTAACGTGGACATAAATTaGGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEREQGINVDIN*GSFRKREITLR Trigger: TCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCCCAATTTATGTCCACGTTAATTCCTTGCTCTCTCTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CCA 72 bp | GGATTTGGCGGCACAGTTCCTGTATGTACAACATACTaGATTATAATCAACAACACAGGTAAACGTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: GFGGTVPVCTTY*IIINNTGKRLF Trigger: AAATAAACGTTTACCTGTGTTGTTGATTATAATCCAGTATGTTGTACATACAGGAACTGTGCCGCCAAATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCGCCCAGCTGCAGGGATaGGGGCGACGAGTGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPLCLITWSARPKTRVAQLQG*GRRVRA Trigger: CGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGC...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCGATGCGGGCGACGAGTaGGAGCGGACGTGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRHCQVQAACLPEEHEALDAGDE*ERTCCA Trigger: CGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATC...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCCGGAGATGTGCATGCTaGTGTGCAGGGCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPLCLITWSARPKTRVRRCAC*CAGPPA Trigger: CGCTGGAGGCCCTGCACAGCAGCATGCACATCTCCG...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CAA 72 bp | ACGTGGTGCAGCTGCAGGCCCGCTCTGCCTCATCACTaGGTCCGCAAGGCCCAAGACTCGCGTCAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TWCSCRPALPHH*VRKAQDSRQLT Trigger: TGTGAGCTGACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGCTGCACCACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCTCGGTGTCCAGGTCCTaGGTGACGTGGATGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPLCLITWSARPKTRVSVSRS*VTWMTC Trigger: GCAAGTCATCCACGTCACGCAGGACCTGGACACCGA...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCTGCTGCTGCTGCTGCTaGGTGGTCAGTGCATTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRHCQVQAACLPEEHEALCCCCC*VVSALG Trigger: GCCCAATGCACTGACCACTCAGCAGCAGCAGCAGCA...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCGAGTCTGTGCTGGATTaGCGCGAGTGCGAGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRHCQVQAACLPEEHEALESVLD*RECEPE Trigger: TTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTC...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTCTGGTCTCGGTTTCCATaGGGAGCTGTCGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHCQVQAACLPEEHEALWSRFP*GAVGRG Trigger: CCCTCTGCCGACAGCTCCCCATGGAAACCGAGACCA...GAGAGCTTCATGTTCCTCTGGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCTGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTACGGCTCCCGCACCGGTaGCCAGCTGCAGGGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLDQAAYQNSLPEVSFVRLPHR*PAAGMR Trigger: CCGCATCCCTGCAGCTGGGCACCGGTGCGGGAGCCG...TACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCGCTGAGGAAGTCTTCTaGAGTTGTGGGGACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AAGPLCLITWSARPKTRVAEEVF*SCGDTV Trigger: TACAGTGTCCCCACAACTCCAGAAGACTTCCTCAGC...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCACGTGGATGACTTGCTaGCCTGGCGGCGGGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNTKQLRTSLPSAGGLPATWMTC*PGGGSG Trigger: TCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGT...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGGTGACGTGGATGACTTaGTGCCCTGGCGGCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGQVTSPSADSFLLSNAQVTWMT*CPGGGS Trigger: GCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCAC...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAACGGCTCCCGCACCGGTaGCCAGCTGCAGGGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKRLPHR*PAAGMR Trigger: CCGCATCCCTGCAGCTGGGCACCGGTGCGGGAGCCG...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCGTCAACATTTGTTCCTaGAAGGCAGTCCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPLCLITWSARPKTRVVNICS*KAVQEI Trigger: GATTTCCTGGACTGCCTTCCAGGAACAAATGTTGAC...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTTCTGGCCAGTGGCCGTaGAGGTCATCTCCCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPSGQWP*RSSPTR Trigger: CCGGGTGGGAGATGACCTTCACGGCCACTGGCCAGA...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTACGTGGATGACTTGCTaGCCTGGCGGCGGGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPTWMTC*PGGGSG Trigger: TCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGT...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAAGATGCGGGCGACGAGTaGGAGCGGACGTGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKDAGDE*ERTCCA Trigger: CGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATC...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCTGGTCTCGGTTTCCATaGGGAGCTGTCGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAWSRFP*GAVGRG Trigger: CCCTCTGCCGACAGCTCCCCATGGAAACCGAGACCA...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTATCTGGCCAGTGGCCGTaGAGGTCATCTCCCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTKLPIRIHCLRSALYGLSGQWP*RSSPTR Trigger: CCGGGTGGGAGATGACCTTCACGGCCACTGGCCAGA...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGTCCATCTGGATCCTCTaGAGCCGCAGTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGQVTSPSADSFLLSNAQSIWIL*SRSFCC Trigger: GCAGCAGAAACTGCGGCTTCAGAGGATCCAGATGGA...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCTGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCGGAGATGTGCATaGTGCTGTGCAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFLDQAAYQNSLPEVSFVWRRCA*CCAGPP Trigger: TGGAGGCCCTGCACAGCAGCATGCACATCTCCGCCA...TACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGAGTCGAGGCCCCGGGTaGCCGCCTGATGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSSRGPG*PPDESV Trigger: CACAGACTCATCAGGCGGCCACCCGGGGCCTCGACT...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCATTGCGAGATTCGGCTaGGACACTGCCATGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAIARFG*DTAMDL Trigger: GAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAAT...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CAA 72 bp | AGGCAGCGGAGCACTTTGGGGCACTTCTCACACGTCTaGCTTGCCTTGTCTTTGAGGGGTTCTGACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRSTLGHFSHV*LALSLRGSDMS Trigger: AGACATGTCAGAACCCCTCAAAGACAAGGCAAGCAAGACGTGTGAGAAGTGCCCCAAAGTGCTCCGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGGTGACGTGGATGACTTaGTGCCCTGGCGGCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQVTWMT*CPGGGS Trigger: GCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCAC...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGCGGAGATGTGCATGCTaGTGTGCAGGGCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSRRCAC*CAGPPA Trigger: CGCTGGAGGCCCTGCACAGCAGCATGCACATCTCCG...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCCTGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTACTGATGAGTCTGTGCTaGATTGGCGCGAGTGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLDQAAYQNSLPEVSFVLMSLC*IGASAS Trigger: GCTCGCACTCGCGCCAATCCAGCACAGACTCATCAG...TACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| 3UTR CAA 72 bp | GGCTGGAGATGGCGCTCCACTTGCACACATGAACTCTaGAGTTCACTCAGAACTAGGGGGAAAAAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWRWRSTCTHEL*SSLRTRGKKVW Trigger: CCAGACCTTTTTCCCCCTAGTTCTGAGTGAACTCAAGAGTTCATGTGTGCAAGTGGAGCGCCATCTCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCCTCATGAGCTCCTCTTaGCGCATCCTAATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNTKQLRTSLPSAGGLPALMSSS*RILILS Trigger: AGAGAGGATTAGGATGCGTCAAGAGGAGCTCATGAG...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAACGCCTGATGAGTCTGTaGTGGATTGGCGCGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKRLMSL*WIGASA Trigger: CGCACTCGCGCCAATCCAGCACAGACTCATCAGGCG...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATGCACCGGTGCCCAGCTaGAGGGATGCGGGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHAPVPS*RDAGDE Trigger: CTCGTCGCCCGCATCCCTGCAGCTGGGCACCGGTGC...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS-3UTR GCA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCGCACCGGTGCCCAGCTaGAGGGATGCGGGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNASEYKTAHKIHGSSGCAPVPS*RDAGDE Trigger: CTCGTCGCCCGCATCCCTGCAGCTGGGCACCGGTGC...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGGGGAAGCGGGTCTGCTaGGGATTGACGGTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSGKRVC*GLTVMG Trigger: ACCCATGACCGTCAATCCCCAGCAGACCCGCTTCCC...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGGCCCAGCTGCAGGGATaGGGGCGACGAGTGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKKVWLLALVFCNKPYFMAQLQG*GRRVRA Trigger: CGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGC...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGTGGCGGAGATGTGCATaGTGCTGTGCAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQWRRCA*CCAGPP Trigger: TGGAGGCCCTGCACAGCAGCATGCACATCTCCGCCA...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAACTGATGAGTCTGTGCTaGATTGGCGCGAGTGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKLMSLC*IGASAS Trigger: GCTCGCACTCGCGCCAATCCAGCACAGACTCATCAG...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTATGCCATGGACCTCTGTaGCACCGAGGTGGAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WTKLPIRIHCLRSALYGLCHGPL*HRGGSD Trigger: ATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCA...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAATCCATCTGGATCCTCTaGAGCCGCAGTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKSIWIL*SRSFCC Trigger: GCAGCAGAAACTGCGGCTTCAGAGGATCCAGATGGA...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTAGATAGGGCCCTCCATTaGGGAAAGGATCTGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: WTKLPIRIHCLRSALYGLDRALH*GKDLSY Trigger: GTAGCTCAGATCCTTTCCTCAATGGAGGGCCCTATC...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTCGCCTGATGAGTCTGTaGTGGATTGGCGCGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFLQKKRDHFKSAESNSSRLMSL*WIGASA Trigger: CGCACTCGCGCCAATCCAGCACAGACTCATCAGGCG...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTGAGTCTGTGCTGGATTaGCGCGAGTGCGAGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQKKRDHFKSAESNSSESVLD*RECEPE Trigger: TTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTC...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCCTGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTAGCTGAGGAAGTCTTCTaGAGTTGTGGGGACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLDQAAYQNSLPEVSFVAEEVF*SCGDTV Trigger: TACAGTGTCCCCACAACTCCAGAAGACTTCCTCAGC...TACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTCCTGTGGGTTGGTTCTaGGTCGGGTGGTTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQKKRDHFKSAESNSSPVGWF*VGWFCG Trigger: TCCACAGAACCACCCGACTCAGAACCAACCCACAGG...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTACTCATGAGCTCCTCTTaGCGCATCCTAATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTKLPIRIHCLRSALYGLLMSSS*RILILS Trigger: AGAGAGGATTAGGATGCGTCAAGAGGAGCTCATGAG...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCCAGACTCTACATCATTaGAGAGAGGGATCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAQTLHH*REGSDL Trigger: AAGATCTGATCCCTCTCTTCAATGATGTAGAGTCTG...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAACTGCTGAGTGGTCAGTaGATTGGGCACACTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKLLSGQ*IGHTHE Trigger: CTCATGAGTGTGCCCAATGCACTGACCACTCAGCAG...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTATTAAGGAAGTATCTCTaGCCAGTGGCCGTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WTKLPIRIHCLRSALYGLLRKYL*PVAVKV Trigger: GACCTTCACGGCCACTGGCCAGAGATACTTCCTTAA...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATTGCTGCTGCTGCTGCTaGGTGGTCAGTGCATTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHCCCCC*VVSALG Trigger: GCCCAATGCACTGACCACTCAGCAGCAGCAGCAGCA...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS-3UTR TCA 90 bp | CACTTCCTGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTAATTGAGGAAAGGATCTaGGCTACTGTTGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLDQAAYQNSLPEVSFVIEERI*ATVGDR Trigger: TCTGTCACCAACAGTAGCTCAGATCCTTTCCTCAAT...TACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCAGGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTACCAGACTCTAGATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGATAGGGCCCTCCATTaGGGAAAGGATCTGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLYQTLDKMVSSDGFGGTDRALH*GKDLSY Trigger: GTAGCTCAGATCCTTTCCTCAATGGAGGGCCCTATC...TGTGCCGCCAAATCCATCAGATGAAACCATTTTATCTAGAGTCTGGTACAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS-3UTR CCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGTTAAGGAAGTATCTCTaGCCAGTGGCCGTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSLRKYL*PVAVKV Trigger: GACCTTCACGGCCACTGGCCAGAGATACTTCCTTAA...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCGGGAAGCGGGTCTGCTaGGGATTGACGGTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNASEYKTAHKIHGSSGCGKRVC*GLTVMG Trigger: ACCCATGACCGTCAATCCCCAGCAGACCCGCTTCCC...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGGTGATTTTCTCTATGTaGTTAAGGAAGTATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HGQVTSPSADSFLLSNAQVIFSM*LRKYLW Trigger: CCAGAGATACTTCCTTAATCACATAGAGAAAATCAC...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTCAGACTCTACATCATTaGAGAGAGGGATCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPQTLHH*REGSDL Trigger: AAGATCTGATCCCTCTCTTCAATGATGTAGAGTCTG...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGACCTTCCTGGGGTCTTaGCATGTGGTGATTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSTFLGS*HVVIFS Trigger: AGAGAAAATCACCACATGGCAAGACCCCAGGAAGGT...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAGTGCTGAAAGCAACAGCAGTCTGCTGAGTGGTCAGTaGATTGGGCACACTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLQKKRDHFKSAESNSSLLSGQ*IGHTHE Trigger: CTCATGAGTGTGCCCAATGCACTGACCACTCAGCAG...ACTGCTGTTGCTTTCAGCACTCTTAAAGTGATCTCTCTTTTTCTGAAGGAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR GCA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCCCAGGCCACTGTCTGTaGTCTGCTCCCGTGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNASEYKTAHKIHGSSGCPGHCL*SAPVND Trigger: ATCATTCACGGGAGCAGAGCACAGACAGTGGCCTGG...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATATTGCGAGATTCGGCTaGGACACTGCCATGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHIARFG*DTAMDL Trigger: GAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAAT...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS-3UTR CCA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAAGTCAACATTTGTTCCTaGAAGGCAGTCCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FCTTHPALSATEMQACRKVNICS*KAVQEI Trigger: GATTTCCTGGACTGCCTTCCAGGAACAAATGTTGAC...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGATTGAGGAAAGGATCTaGGCTACTGTTGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQIEERI*ATVGDR Trigger: TCTGTCACCAACAGTAGCTCAGATCCTTTCCTCAAT...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGCCCATAAACAAAGTTTaGAGCAAACTCCCACCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSPINKV*SKLPPL Trigger: TAAGGGTGGGAGTTTGCTTCAAACTTTGTTTATGGG...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGTGCCATGGACCTCTGTaGCACCGAGGTGGAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKKVWLLALVFCNKPYFMCHGPL*HRGGSD Trigger: ATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCA...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR TCA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGGTGATTTTCTCTATGTaGTTAAGGAAGTATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQVIFSM*LRKYLW Trigger: CCAGAGATACTTCCTTAATCACATAGAGAAAATCAC...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS GCA 90 bp | GCGGCTCCCGCACCGGTGCCCAGCTGCAGGGATGCGGGCGACGAGTaGGAGCGGACGTGCTGCGCGCCGCCAGCTAGTCGAGGCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAPAPVPSCRDAGDE*ERTCCAPPASRGPG Trigger: CCCGGGGCCTCGACTAGCTGGCGGCGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGCACCGGTGCGGGAGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | CCGGTGCCCAGCTGCAGGGATGCGGGCGACGAGTGCGAGCGGACGTaGTGCGCGCCGCCAGCTAGTCGAGGCCCCGGGTGGCCGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVPSCRDAGDECERT*CAPPASRGPGWPPD Trigger: ATCAGGCGGCCACCCGGGGCCTCGACTAGCTGGCGGCGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGCACCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | GTGCCCAGCTGCAGGGATGCGGGCGACGAGTGCGAGCGGACGTGCTaGGCGCCGCCAGCTAGTCGAGGCCCCGGGTGGCCGCCTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPSCRDAGDECERTC*APPASRGPGWPPDE Trigger: CTCATCAGGCGGCCACCCGGGGCCTCGACTAGCTGGCGGCGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | GTCGGTCACGTCATAGGACTGCTGGCGGAGATGTGCATGCTGCTGTaGAGGGCCTCCAGCGGCTCCCGCACCGGTGCCCAGCTGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGHVIGLLAEMCMLL*RASSGSRTGAQLQG Trigger: TCCCTGCAGCTGGGCACCGGTGCGGGAGCCGCTGGAGGCCCTGCACAGCAGCATGCACATCTCCGCCAGCAGTCCTATGACGTGACCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | CAACGGCAGCTCGTCGGTCACGTCATAGGACTGCTGGCGGAGATGTaGATGCTGCTGTGCAGGGCCTCCAGCGGCTCCCGCACCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRQLVGHVIGLLAEM*MLLCRASSGSRTGA Trigger: GGCACCGGTGCGGGAGCCGCTGGAGGCCCTGCACAGCAGCATGCACATCTCCGCCAGCAGTCCTATGACGTGACCGACGAGCTGCCGTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | GCTTCGAGGTCGGTGTCCAGGTCCTGCGTGACGTGGATGACTTGCTaGCCTGGCGGCGGGAGCGGATGGGGCACCGAGGACGGATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSVSRSCVTWMTC*PGGGSGWGTEDGFI Trigger: GATGAATCCGTCCTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGACCTCGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS CCA 90 bp | GAGTTGAAGAGGGCTTCGAGGTCGGTGTCCAGGTCCTGCGTGACGTaGATGACTTGCTGCCCTGGCGGCGGGAGCGGATGGGGCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELKRASRSVSRSCVT*MTCCPGGGSGWGTE Trigger: CTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGACCTCGAAGCCCTCTTCAACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CCA 90 bp | TCCTGCGTGACGTGGATGACTTGCTGCCCTGGCGGCGGGAGCGGATaGGGCACCGAGGACGGATTCATCTTTATCCCCGGAACCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCVTWMTCCPGGGSG*GTEDGFIFIPGTGL Trigger: GAGGCCGGTTCCGGGGATAAAGATGAATCCGTCCTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS CCA 90 bp | GCTAGTCGAGGCCCCGGGTGGCCGCCTGATGAGTCTGTGCTGGATTaGCGCGAGTGCGAGCCGGAATCGGGCTCCTTAAAGAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRGPGWPPDESVLD*RECEPESGSLKKDS Trigger: GGAGTCCTTCTTTAAGGAGCCCGATTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTCATCAGGCGGCCACCCGGGGCCTCGACTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | CGAGCGCAGCCGCCGCGGCTCCCGGACTGTCCCATAAACAAAGTTTaGAGCAAACTCCCACCCTTAGGAAAGAGGCGGGCCGAAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RAQPPRLPDCPINKV*SKLPPLGKRRAESG Trigger: TCCACTTTCGGCCCGCCTCTTTCCTAAGGGTGGGAGTTTGCTTCAAACTTTGTTTATGGGACAGTCCGGGAGCCGCGGCGGCTGCGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAGGCCCGCTCTGCCTCATCACTTGGTCCGCAAGGCCCAAGACTCGCGTCTCCATCTCGTCCATGTaGCTGAGGAAGTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAGPLCLITWSARPKTRVSISSM*LRKSSG Trigger: TCCAGAAGACTTCCTCAGCAACATGGACGAGATGGA...GACGCGAGTCTTGGGCCTTGCGGACCAAGTGATGAGGCAGAGCGGGCCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS TCA 90 bp | GTGGTCAGTGCATTGGGCACACTCATGAGCCCTGTGGGTTGGTTCTaGGTCGGGTGGTTCTGTGGACTCAGGCTAGTGGCCACGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVSALGTLMSPVGWF*VGWFCGLRLVATTC Trigger: GCAAGTCGTGGCCACTAGCCTGAGTCCACAGAACCACCCGACTCAGAACCAACCCACAGGGCTCATGAGTGTGCCCAATGCACTGACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | TCTGCTGCTGCTGCTGCTGAGTGGTCAGTGCATTGGGCACACTCATaGGCCCTGTGGGTTGGTTCTGAGTCGGGTGGTTCTGTGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAAAAAEWSVHWAHS*ALWVGSESGGSVDS Trigger: TGAGTCCACAGAACCACCCGACTCAGAACCAACCCACAGGGCTCATGAGTGTGCCCAATGCACTGACCACTCAGCAGCAGCAGCAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS GCA 90 bp | GACTTGCTGGTGTTGGTGATTCATTGCGAGATTCGGCTGGGACACTaGCATGGACCTCTGTGGCACCGAGGTGGAAGTGATGGACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLLVLVIHCEIRLGH*HGPLWHRGGSDGRV Trigger: CACCCGTCCATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAATGAATCACCAACACCAGCAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 90 bp | TGGACTCAGGCTAGTGGCCACGACTTGCTGGTGTTGGTGATTCATTaGGAGATTCGGCTGGGACACTGCCATGGACCTCTGTGGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: WTQASGHDLLVLVIH*EIRLGHCHGPLWHR Trigger: TCGGTGCCACAGAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAATGAATCACCAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | TCGGCTGGGACACTGCCATGGACCTCTGTGGCACCGAGGTGGAAGTaGTGGACGGGTGGAGGTTCACATGATTCAGAGGCTGATTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGTLPWTSVAPRWK*WTGGGSHDSEADSS Trigger: TGATGAATCAGCCTCTGAATCATGTGAACCTCCACCCGTCCATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCAGTGTCCCAGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTACGTGACGTGGATGACTaGCTGCCCTGGCGGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WTKLPIRIHCLRSALYGLRDVDD*LPWRRE Trigger: CTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACG...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | TGGTTCTGTGGACTCAGGCTAGTGGCCACGACTTGCTGGTGTTGGTaGTTCATTGCGAGATTCGGCTGGGACACTGCCATGGACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WFCGLRLVATTCWCW*FIARFGWDTAMDLC Trigger: ACAGAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAATGAATCACCAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCCACAGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CCA 90 bp | GTGATTCATTGCGAGATTCGGCTGGGACACTGCCATGGACCTCTGTaGCACCGAGGTGGAAGTGATGGACGGGTGGAGGTTCACATGATT | + |
|
Preference number: 5 (lower is better) Translates to: VIHCEIRLGHCHGPL*HRGGSDGRVEVHMI Trigger: AATCATGTGAACCTCCACCCGTCCATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCAATGAATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CCA 90 bp | CACACTCATGAGCCCTGTGGGTTGGTTCTGAGTCGGGTGGTTCTGTaGACTCAGGCTAGTGGCCACGACTTGCTGGTGTTGGTGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HTHEPCGLVLSRVVL*TQASGHDLLVLVIH Trigger: ATGAATCACCAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCCACAGAACCACCCGACTCAGAACCAACCCACAGGGCTCATGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CAA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCCATGAGCCCTGTGGGTaGGTTCTGAGTCGGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAHEPCG*VLSRVV Trigger: AACCACCCGACTCAGAACCAACCCACAGGGCTCATG...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | CTGGAAGGCAGTCCAGGAAATCAGGGAAGCGGGTCTGCTGGGGATTaGCGGTCATGGGTGTCTGACCGGAATTTTCACCTGTATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LEGSPGNQGSGSAGD*RSWVSDRNFHLYPS Trigger: AGATGGATACAGGTGAAAATTCCGGTCAGACACCCATGACCGTCAATCCCCAGCAGACCCGCTTCCCTGATTTCCTGGACTGCCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGCGTGACGTGGATGACTaGCTGCCCTGGCGGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQRDVDD*LPWRRE Trigger: CTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACG...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCGGAAGTCTTCTGGAGTaGTGGGGACACTGTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAGSLLE*WGHCST Trigger: GGTGCTACAGTGTCCCCACAACTCCAGAAGACTTCC...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCACAACCCATCCTGCTTTATCTGCCACAGAAATGCAGGCTTGCAGAAAACATGAGCCCTGTGGGTaGGTTCTGAGTCGGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCTTHPALSATEMQACRKHEPCG*VLSRVV Trigger: AACCACCCGACTCAGAACCAACCCACAGGGCTCATG...TTTTCTGCAAGCCTGCATTTCTGTGGCAGATAAAGCAGGATGGGTTGTGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTTCCCGAGGTCAACATTaGTTCCTGGAAGGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPSRGQH*FLEGSP Trigger: TGGACTGCCTTCCAGGAACAAATGTTGACCTCGGGA...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | CACGGACAAGTCACGTCACCATCTGCAGATTCCTTTCTGCTGAGCAATGCCCAGAGAAAGGGCTCGCTTTaGTTCAGAGCAGACTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: HGQVTSPSADSFLLSNAQRKGSL*FRADST Trigger: TGTAGAGTCTGCTCTGAACAAAAGCGAGCCCTTTCT...CTGGGCATTGCTCAGCAGAAAGGAATCTGCAGATGGTGACGTGACTTGTCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | TGGACCAAGCTGCCTATCAGAATTCACTGCCTGAGGTCAGCTTTGTATGGCTTAGCTAGTGGCCACGACTaGCTGGTGTTGGTGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTKLPIRIHCLRSALYGLASGHD*LVLVIH Trigger: ATGAATCACCAACACCAGCAAGTCGTGGCCACTAGC...TAAGCCATACAAAGCTGACCTCAGGCAGTGAATTCTGATAGGCAGCTTGGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | CAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCCGCAGACTCTACATCATaGAAGAGAGGGATCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: QNTKQLRTSLPSAGGLPAADSTS*KRGIRS Trigger: AGATCTGATCCCTCTCTTCAATGATGTAGAGTCTGC...GGCAGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | ATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGAGATCGCACCTTCCTGGGGTCTaGCCATGTGGTGATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IYSSCPDEGLSVCVNQRSHLPGV*PCGDFL Trigger: GAGAAAATCACCACATGGCAAGACCCCAGGAAGGTG...CGATCTCTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGTGCACCCTGACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGTCCATCTCGTCCATGTaGCTGAGGAAGTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKCTLTLFSLTAVSFGIKSISSM*LRKSSG Trigger: TCCAGAAGACTTCCTCAGCAACATGGACGAGATGGA...CTTTATGCCAAAAGACACCGCTGTTAGAGAGAAGAGGGTCAGGGTGCACTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGCCTCATGAGCTCCTCTaGACGCATCCTAATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQPHELL*THPNPL Trigger: GAGAGGATTAGGATGCGTCAAGAGGAGCTCATGAGG...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTACAAATCTACAGCTCATGTCCTGACGAGGGCCTTTCTGTATGTGTTAATCAGTCCCGAGGTCAACATTaGTTCCTGGAAGGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQIYSSCPDEGLSVCVNQSRGQH*FLEGSP Trigger: TGGACTGCCTTCCAGGAACAAATGTTGACCTCGGGA...CTGATTAACACATACAGAAAGGCCCTCGTCAGGACATGAGCTGTAGATTTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | GTTCAAAATACTAAACAGCTAAGGACGTCATTGCCAAGTGCAGGCGGCCTGCCTGCAGACTCTACATCATaGAAGAGAGGGATCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VQNTKQLRTSLPSAGGLPADSTS*KRGIRS Trigger: AGATCTGATCCCTCTCTTCAATGATGTAGAGTCTGC...AGGCAGGCCGCCTGCACTTGGCAATGACGTCCTTAGCTGTTTAGTATTTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 90 bp | AGGTTAGAAAGGGCTCGCTTTTGTTCAGAGCAGACTCTACATCATTaGAGAGAGGGATCAGATCTTCAGACTCCAAAGTCCCGAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLERARFCSEQTLHH*REGSDLQTPKSRGQ Trigger: TTGACCTCGGGACTTTGGAGTCTGAAGATCTGATCCCTCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGCGAGCCCTTTCTAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS-3UTR CAA 90 bp | AATAATGCCTCAGAATACAAAACAGCACACAAAATTCATGGTTCATCAGGCTGCCCTCATGAGCTCCTCTaGACGCATCCTAATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NNASEYKTAHKIHGSSGCPHELL*THPNPL Trigger: GAGAGGATTAGGATGCGTCAAGAGGAGCTCATGAGG...GCAGCCTGATGAACCATGAATTTTGTGTGCTGTTTTGTATTCTGAGGCATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGGGAAGTCTTCTGGAGTaGTGGGGACACTGTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKKVWLLALVFCNKPYFMGSLLE*WGHCST Trigger: GGTGCTACAGTGTCCCCACAACTCCAGAAGACTTCC...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAAAAGGTCTGGCTTCTAGCTTTAGTGTTCTGTAACAAACCATATTTTATGCACCTTCCTGGGGTCTaGCCATGTGGTGATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKKVWLLALVFCNKPYFMHLPGV*PCGDFL Trigger: GAGAAAATCACCACATGGCAAGACCCCAGGAAGGTG...CATAAAATATGGTTTGTTACAGAACACTAAAGCTAGAAGCCAGACCTTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAATGGTTTCATCTGATGGATTTGGCGGCACAGTTCCTGTATGTACAACATAGAAAGGGCTCGCTTTaGTTCAGAGCAGACTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: IKWFHLMDLAAQFLYVQHRKGSL*FRADST Trigger: TGTAGAGTCTGCTCTGAACAAAAGCGAGCCCTTTCT...ATGTTGTACATACAGGAACTGTGCCGCCAAATCCATCAGATGAAACCATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029380.14 |
||
| CDS GCA 72 bp | GCAGGGCCTCCAGCGGCTCCCGCACCGGTGCCCAGCTaGAGGGATGCGGGCGACGAGTGCGAGCGGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPPAAPAPVPS*RDAGDECERTC Trigger: GCACGTCCGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGCACCGGTGCGGGAGCCGCTGGAGGCCCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS GCA 72 bp | GCACCGGTGCCCAGCTGCAGGGATGCGGGCGACGAGTaGGAGCGGACGTGCTGCGCGCCGCCAGCTAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: APVPSCRDAGDE*ERTCCAPPASR Trigger: TCGACTAGCTGGCGGCGCGCAGCACGTCCGCTCGCACTCGTCGCCCGCATCCCTGCAGCTGGGCACCGGTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS GCA 72 bp | TCGGTGTCCAGGTCCTGCGTGACGTGGATGACTTGCTaGCCTGGCGGCGGGAGCGGATGGGGCACCGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVSRSCVTWMTC*PGGGSGWGTED Trigger: GTCCTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS CCA 72 bp | GTCGAGGCCCCGGGTGGCCGCCTGATGAGTCTGTGCTaGATTGGCGCGAGTGCGAGCCGGAATCGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VEAPGGRLMSLC*IGASASRNRAP Trigger: AGGAGCCCGATTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTCATCAGGCGGCCACCCGGGGCCTCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
||
| CDS CAA 72 bp | GAGGTCGGTGTCCAGGTCCTGCGTGACGTGGATGACTaGCTGCCCTGGCGGCGGGAGCGGATGGGGCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: EVGVQVLRDVDD*LPWRRERMGHR Trigger: TCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGACCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 90 bp | GAGGGCTTCGAGGTCGGTGTCCAGGTCCTGCGTGACGTGGATGACTaGCTGCCCTGGCGGCGGGAGCGGATGGGGCACCGAGGACGGATT | + |
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Preference number: 6 (lower is better) Translates to: EGFEVGVQVLRDVDD*LPWRRERMGHRGRI Trigger: AATCCGTCCTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGACCTCGAAGCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 72 bp | CTAGTCGAGGCCCCGGGTGGCCGCCTGATGAGTCTGTaGTGGATTGGCGCGAGTGCGAGCCGGAATCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVEAPGGRLMSL*WIGASASRNRA Trigger: AGCCCGATTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTCATCAGGCGGCCACCCGGGGCCTCGACTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CCA 72 bp | GGCCCCGGGTGGCCGCCTGATGAGTCTGTGCTGGATTaGCGCGAGTGCGAGCCGGAATCGGGCTCCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: GPGWPPDESVLD*RECEPESGSLK Trigger: CTTTAAGGAGCCCGATTCCGGCTCGCACTCGCGCCAATCCAGCACAGACTCATCAGGCGGCCACCCGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS GCA 72 bp | GAGTTGAAGAGGGCTTCGAGGTCGGTGTCCAGGTCCTaGGTGACGTGGATGACTTGCTGCCCTGGCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: ELKRASRSVSRS*VTWMTCCPGGG Trigger: CCCGCCGCCAGGGCAGCAAGTCATCCACGTCACGCAGGACCTGGACACCGACCTCGAAGCCCTCTTCAACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CCA 72 bp | ACGTGGATGACTTGCTGCCCTGGCGGCGGGAGCGGATaGGGCACCGAGGACGGATTCATCTTTATCCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: TWMTCCPGGGSG*GTEDGFIFIPG Trigger: TCCGGGGATAAAGATGAATCCGTCCTCGGTGCCCCATCCGCTCCCGCCGCCAGGGCAGCAAGTCATCCACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS CCA 72 bp | TGCGAGATTCGGCTGGGACACTGCCATGGACCTCTGTaGCACCGAGGTGGAAGTGATGGACGGGTGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: CEIRLGHCHGPL*HRGGSDGRVEV Trigger: AACCTCCACCCGTCCATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCAGTGTCCCAGCCGAATCTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 90 bp | ACGAGCGCAGCCGCCGCGGCTCCCGGACTGTCCCATAAACAAAGTTaGAAGCAAACTCCCACCCTTAGGAAAGAGGCGGGCCGAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TSAAAAAPGLSHKQS*KQTPTLRKEAGRKW Trigger: CCACTTTCGGCCCGCCTCTTTCCTAAGGGTGGGAGTTTGCTTCAAACTTTGTTTATGGGACAGTCCGGGAGCCGCGGCGGCTGCGCTCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS TCA 72 bp | GCATTGGGCACACTCATGAGCCCTGTGGGTTGGTTCTaGGTCGGGTGGTTCTGTGGACTCAGGCTAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALGTLMSPVGWF*VGWFCGLRLVA Trigger: GGCCACTAGCCTGAGTCCACAGAACCACCCGACTCAGAACCAACCCACAGGGCTCATGAGTGTGCCCAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 72 bp | CCGCCGCGGCTCCCGGACTGTCCCATAAACAAAGTTTaGAGCAAACTCCCACCCTTAGGAAAGAGGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPRLPDCPINKV*SKLPPLGKRRA Trigger: GGCCCGCCTCTTTCCTAAGGGTGGGAGTTTGCTTCAAACTTTGTTTATGGGACAGTCCGGGAGCCGCGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS CCA 72 bp | GAGCCCTGTGGGTTGGTTCTGAGTCGGGTGGTTCTGTaGACTCAGGCTAGTGGCCACGACTTGCTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: EPCGLVLSRVVL*TQASGHDLLVL Trigger: CAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCCACAGAACCACCCGACTCAGAACCAACCCACAGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 72 bp | GCCGCCGCGGCTCCCGGACTGTCCCATAAACAAAGTTaGAAGCAAACTCCCACCCTTAGGAAAGAGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAAAPGLSHKQS*KQTPTLRKEAG Trigger: GCCCGCCTCTTTCCTAAGGGTGGGAGTTTGCTTCAAACTTTGTTTATGGGACAGTCCGGGAGCCGCGGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120977.2 |
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| CDS TCA 72 bp | GCTGCTGCTGAGTGGTCAGTGCATTGGGCACACTCATaGGCCCTGTGGGTTGGTTCTGAGTCGGGTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AAAEWSVHWAHS*ALWVGSESGGS Trigger: AGAACCACCCGACTCAGAACCAACCCACAGGGCTCATGAGTGTGCCCAATGCACTGACCACTCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 90 bp | GTTCTGAGTCGGGTGGTTCTGTGGACTCAGGCTAGTGGCCACGACTaGCTGGTGTTGGTGATTCATTGCGAGATTCGGCTGGGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: VLSRVVLWTQASGHD*LVLVIHCEIRLGHC Trigger: GCAGTGTCCCAGCCGAATCTCGCAATGAATCACCAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCCACAGAACCACCCGACTCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 72 bp | ACACTGCCATGGACCTCTGTGGCACCGAGGTGGAAGTaGTGGACGGGTGGAGGTTCACATGATTCAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TLPWTSVAPRWK*WTGGGSHDSEA Trigger: AGCCTCTGAATCATGTGAACCTCCACCCGTCCATCACTTCCACCTCGGTGCCACAGAGGTCCATGGCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 72 bp | GGACTCAGGCTAGTGGCCACGACTTGCTGGTGTTGGTaGTTCATTGCGAGATTCGGCTGGGACACTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: GLRLVATTCWCW*FIARFGWDTAM Trigger: CATGGCAGTGTCCCAGCCGAATCTCGCAATGAATCACCAACACCAGCAAGTCGTGGCCACTAGCCTGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 72 bp | GTGACAGATCTCATATCTGTGCTCATGGCAGGCGTGTaGACAGGGGCCATGGTCTCGGTTTCCATGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VTDLISVLMAGV*TGAMVSVSMGS Trigger: GCTCCCCATGGAAACCGAGACCATGGCCCCTGTCAACACGCCTGCCATGAGCACAGATATGAGATCTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 72 bp | AGTCCAGGAAATCAGGGAAGCGGGTCTGCTGGGGATTaGCGGTCATGGGTGTCTGACCGGAATTTTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: SPGNQGSGSAGD*RSWVSDRNFHL Trigger: CAGGTGAAAATTCCGGTCAGACACCCATGACCGTCAATCCCCAGCAGACCCGCTTCCCTGATTTCCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 90 bp | AGAGAGGGATCAGATCTTCAGACTCCAAAGTCCCGAGGTCAACATTaGTTCCTGGAAGGCAGTCCAGGAAATCAGGGAAGCGGGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: REGSDLQTPKSRGQH*FLEGSPGNQGSGSA Trigger: AGCAGACCCGCTTCCCTGATTTCCTGGACTGCCTTCCAGGAACAAATGTTGACCTCGGGACTTTGGAGTCTGAAGATCTGATCCCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS CAA 72 bp | TCAGATCTTCAGACTCCAAAGTCCCGAGGTCAACATTaGTTCCTGGAAGGCAGTCCAGGAAATCAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SDLQTPKSRGQH*FLEGSPGNQGS Trigger: GCTTCCCTGATTTCCTGGACTGCCTTCCAGGAACAAATGTTGACCTCGGGACTTTGGAGTCTGAAGATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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| CDS TCA 72 bp | AGGGCTCGCTTTTGTTCAGAGCAGACTCTACATCATTaGAGAGAGGGATCAGATCTTCAGACTCCAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RARFCSEQTLHH*REGSDLQTPKS Trigger: GGACTTTGGAGTCTGAAGATCTGATCCCTCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGCGAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029380.14 ENSMUST00000120977.2 |
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