Pregenerated sensors for WWP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041058Ensembl transcript IDs: ENSMUST00000035982.8, ENSMUST00000108246.9
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTaGAGGGTCCAGTTCAGAAGAGGGATGGGAAGGAGACAGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LLTSNFVLLDSVSQM*RVQFRRGMGRRQQG Trigger: CCCCTGCTGTCTCCTTCCCATCCCTCTTCTGAACTGGACCCTCCACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 90 bp | GTCTCTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTaGGCCAGATGTGGAGGGTCCAGTTCAGAAGAGGGATGGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: VSRSSSPPTLSYWIQ*ARCGGSSSEEGWEG Trigger: TCCTTCCCATCCCTCTTCTGAACTGGACCCTCCACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR CCA 90 bp | CCTCTGCTCTGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTaGATCTATCACACGACTTCTGTGTCTACTGATATAACAATGATG | + |
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Preference number: 1 (lower is better) Translates to: PLLCSKSIPAAPRHD*IYHTTSVSTDITMM Trigger: CATCATTGTTATATCAGTAGACACAGAAGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCAGAGCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 90 bp | TCTTTTTGGTTATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTaGACTTCTCTGTCACTTCTTGACAGTGTGGCCTACCAACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SFWLFGFPLSPHVHH*TSLSLLDSVAYQQA Trigger: TGCCTGTTGGTAGGCCACACTGTCAAGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAATAACCAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGAATAGACCTCTGCTCTaGAGCAAGTCAATCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVNRPLL*SKSIPA Trigger: AGCTGGGATTGACTTGCTGCAGAGCAGAGGTCTATT...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGCTAGGGAGAAGAACATaGCACATATGCACTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVLGRRT*HICTFP Trigger: GGGAAAAGTGCATATGTGCCATGTTCTTCTCCCTAG...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR TCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTTTATGCAGGACTTTTaGAGACTGGCCATCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVFMQDF*RLAIIY Trigger: GTAAATGATGGCCAGTCTTCAAAAGTCCTGCATAAA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGCCTGAAGTCTATAACTaGTATGAAAGGTTAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVPEVYN*YERLRT Trigger: GGTTCTTAACCTTTCATACCAGTTATAGACTTCAGG...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTGGTAGTCTCCTAATGTaGCAGTTTAGGACATGCAAT | + |
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Preference number: 2 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSGSLLM*QFRTCN Trigger: ATTGCATGTCCTAAACTGTCACATTAGGAGACTACC...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR-3UTR GCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGGCTGGGTATTTAAATaGAAGAGCTTCTCCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: HAANTIQCHLGRRTWHICGWVFK*KSFSKT Trigger: TGTCTTGGAGAAGCTCTTGCATTTAAATACCCAGCC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTCAAACACAACAAAGGTaGTCTGTTGATGGAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSQTQQR*SVDGVV Trigger: AACCACTCCATCAACAGACCACCTTTGTTGTGTTTG...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCAAATTCAGAGTTTTGTaGATGAACGGCTGTCATGTT | + |
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Preference number: 2 (lower is better) Translates to: HAANTIQCHLGRRTWHICKFRVL*MNGCHV Trigger: AACATGACAGCCGTTCATTCACAAAACTCTGAATTT...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATCTAGGGAGAAGAACATaGCACATATGCACTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNLGRRT*HICTFP Trigger: GGGAAAAGTGCATATGTGCCATGTTCTTCTCCCTAG...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | GAGGTCTGCAGACTAGTCTTCCCCAGAAGGCTGGCTTaGTCTTGTGGGTTCTGTTCCTCACGTGAGGTAACC | + |
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Preference number: 3 (lower is better) Translates to: EVCRLVFPRRLA*SCGFCSSREVT Trigger: GGTTACCTCACGTGAGGAACAGAACCCACAAGATCAAGCCAGCCTTCTGGGGAAGACTAGTCTGCAGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGAAGGCTGGCTTGATCTaGTGGGTTCTGTTCCTCACG | + |
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Preference number: 3 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVKAGLI*WVLFLT Trigger: CGTGAGGAACAGAACCCACAAGATCAAGCCAGCCTT...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | TCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTaGGCCAGATGTGGAGGGTCCAGTTCAGAAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SSSPPTLSYWIQ*ARCGGSSSEEG Trigger: TCCCTCTTCTGAACTGGACCCTCCACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | CCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTTaGCAGTGTGGCCTACCAACAGGCAATGGATGCTAC | + |
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Preference number: 3 (lower is better) Translates to: PSRSPLNFSVTS*QCGLPTGNGCY Trigger: GTAGCATCCATTGCCTGTTGGTAGGCCACACTGTCAAGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR CCA 72 bp | TCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTaGAGGGTCCAGTTCAGAAGAGGGATGGGAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SNFVLLDSVSQM*RVQFRRGMGRR Trigger: TCTCCTTCCCATCCCTCTTCTGAACTGGACCCTCCACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR CCA 72 bp | GAAGGGCCCAGGTTTCTGAGCACACTAGGAGAAAGCTaGGGGTCTTTTTGGTTATTTGGTTTCCCTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: EGPRFLSTLGES*GSFWLFGFPLS Trigger: GGAAAGAGGGAAACCAAATAACCAAAAAGACCCCCAGCTTTCTCCTAGTGTGCTCAGAAACCTGGGCCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGATTAGGAAGCCCAGTTaGCTAAAAGTAGCAGTATCA | + |
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Preference number: 3 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVIRKPS*LKVAVS Trigger: TGATACTGCTACTTTTAGCAAACTGGGCTTCCTAAT...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | TTATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTaGACTTCTCTGTCACTTCTTGACAGTGTGGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LFGFPLSPHVHH*TSLSLLDSVAY Trigger: GTAGGCCACACTGTCAAGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGATTTATGCAGGACTTTaGAAGACTGGCCATCATTTA | + |
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Preference number: 3 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVIYAGL*KTGHHL Trigger: TAAATGATGGCCAGTCTTCAAAAGTCCTGCATAAAT...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR CCA 72 bp | TTCACCACTGAACTTCTCTGTCACTTCTTGACAGTGTaGCCTACCAACAGGCAATGGATGCTACAACACAAA | + |
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Preference number: 3 (lower is better) Translates to: FTTELLCHFLTV*PTNRQWMLQHK Trigger: TTTGTGTTGTAGCATCCATTGCCTGTTGGTAGGCCACACTGTCAAGAAGTGACAGAGAAGTTCAGTGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | GGCCATCAGTGCAATGTTAGGCCTCCTTTGAGAAAATaGACATGTAGTAGTAATATAGCAGGGCCATCACAT | + |
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Preference number: 3 (lower is better) Translates to: GHQCNVRPPLRK*TCSSNIAGPSH Trigger: ATGTGATGGCCCTGCTATATTACTACTACATGTTCATTTTCTCAAAGGAGGCCTAACATTGCACTGATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR TCA 72 bp | ATCACATGGTTCTACAAAAACGGTAGTCTCCTAATGTaGCAGTTTAGGACATGCAATAGTAAGCCTGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: ITWFYKNGSLLM*QFRTCNSKPVQ Trigger: CTGAACAGGCTTACTATTGCATGTCCTAAACTGTCACATTAGGAGACTACCGTTTTTGTAGAACCATGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| 3UTR CCA 72 bp | TTGATATTTATTGTGGCATTGTTTACAAACAAGCTATaGAATCAGTATAGACATCGACCAAGTGGACAAACA | + |
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Preference number: 3 (lower is better) Translates to: LIFIVALFTNKL*NQYRHRPSGQT Trigger: TGTTTGTCCACTTGGTCGATGTCTATACTGATTCCATAGCTTGTTTGTAAACAATGCCACAATAAATATCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGAGGCTCCGAGCTTCTaGTCCCACTTCCGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTEAPSF*SHFRTG Trigger: GCCAGTGCGGAAGTGGGACCAGAAGCTCGGAGCCTC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTGGTGGGCGCAGATGTaGCTGGCTTTGGAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVWWAQM*LALELE Trigger: CTCCAGCTCCAAAGCCAGTCACATCTGCGCCCACCA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTCAGAGTCAGGGTCTATaGGGCTCCGAGCTTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTQSQGL*GSELLV Trigger: GACCAGAAGCTCGGAGCCTCATAGACCCTGACTCTG...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTTGGTGGGCGCAGATGTaGCTGGCTTTGGAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSWWAQM*LALELE Trigger: CTCCAGCTCCAAAGCCAGTCACATCTGCGCCCACCA...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTTCCATAGTAGGCCGCTaGCAGGTTGTTGTTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTSIVGR*QVVVLV Trigger: CACCAGAACAACAACCTGGCAGCGGCCTACTATGGA...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGCCTTTAAAGTGTGGTaGCTCCAAACTCGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTAFKVW*LQTRNS Trigger: GGAGTTCCGAGTTTGGAGTCACCACACTTTAAAGGC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGCCAAGTCAACCTCTTaGATGCCACACAGCATAACC | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTAKSTS*MPHSIT Trigger: GGTTATGCTGTGTGGCATGCAAGAGGTTGACTTGGC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTCTTCAACAGGCAACCTaGGAGTTGTCCTTGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTLQQAT*ELSLLQ Trigger: CTGCAACAAGGACAACTCCCAGGTTGCCTGTTGAAG...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGCAAAGCTTCTGTGTTaGTGTTTCCAGACTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVAKLLC*CFQTVA Trigger: GGCCACAGTCTGGAAACACCAACACAGAAGCTTTGC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGCAAAGCTTCTGTGTTaGTGTTTCCAGACTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTAKLLC*CFQTVA Trigger: GGCCACAGTCTGGAAACACCAACACAGAAGCTTTGC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTCTTCTTTCCCAACCTaGAGGCAAAGGCTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVSSFPT*RQRLWS Trigger: AGACCACAGCCTTTGCCTCCAGGTTGGGAAAGAAGA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| 3UTR CAA 72 bp | CCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTaGACAGTGTGGCCTACCAACAGGCAATGGATGCTA | + |
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Preference number: 4 (lower is better) Translates to: PLTFTTELLCHF*TVWPTNRQWML Trigger: TAGCATCCATTGCCTGTTGGTAGGCCACACTGTCAAGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGCATCTCCATTTTGCTaGATTTCTATGGGTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVASPFC*ISMGGE Trigger: CTCGCCACCCATAGAAATTCAGCAAAATGGAGATGC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGAACCTGAGACGGGGATaGAGGTGTGTTTTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVNLRRG*RCVFSI Trigger: AATGGAGAAAACACACCTTCATCCCCGTCTCAGGTT...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTAACCTGAGACGGGGATaGAGGTGTGTTTTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTNLRRG*RCVFSI Trigger: AATGGAGAAAACACACCTTCATCCCCGTCTCAGGTT...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTCATTTGGTAAGCCTTaGGTTCTTGGATCTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVSFGKP*VLGSSH Trigger: GTGGGAAGATCCAAGAACTCAAGGCTTACCAAATGA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGTGAACAGCAGGAGTTaGGAACAACAGTATTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTVNSRS*EQQYWL Trigger: CAACCAATACTGTTGTTCCCAACTCCTGCTGTTCAC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGTCCCACTTCCGCACTaGCAGAGGGAATACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICVPLPH*QREYIH Trigger: GTGAATGTATTCCCTCTGCCAGTGCGGAAGTGGGAC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGCCTTTAAAGTGTGGTaGCTCCAAACTCGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICAFKVW*LQTRNS Trigger: GGAGTTCCGAGTTTGGAGTCACCACACTTTAAAGGC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR TCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTACATTCACTGTGTTCTaGGGATGCTGGGGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSTFTVF*GCWGFL Trigger: CAAGAACCCCCAGCATCCTCAGAACACAGTGAATGT...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGCCAAGTCAACCTCTTaGATGCCACACAGCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICAKSTS*MPHSIT Trigger: GGTTATGCTGTGTGGCATGCAAGAGGTTGACTTGGC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTCTTCAACAGGCAACCTaGGAGTTGTCCTTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSLQQAT*ELSLLQ Trigger: CTGCAACAAGGACAACTCCCAGGTTGCCTGTTGAAG...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTTTCTACACACCCTTCTaGCTGCCTTACTTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTFYTPF*LPYFVK Trigger: TTTGACAAAGTAAGGCAGCCAGAAGGGTGTGTAGAA...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTTCTACACACCCTTCTaGCTGCCTTACTTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVFYTPF*LPYFVK Trigger: TTTGACAAAGTAAGGCAGCCAGAAGGGTGTGTAGAA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTTCTTCTTTCCCAACCTaGAGGCAAAGGCTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSSSFPT*RQRLWS Trigger: AGACCACAGCCTTTGCCTCCAGGTTGGGAAAGAAGA...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGAAAAACCATTCTCTTaGAAGGCCACCATAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTEKPFS*KATIIK Trigger: CTTGATTATGGTGGCCTTGCAAGAGAATGGTTTTTC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTGTAACCTTCCACTGTaGATATCACTAGTGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVCNLPL*ISLVSD Trigger: ATCTGACACTAGTGATATCCACAGTGGAAGGTTACA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCCTCCAAGGTGGTCTGTaGGGTCACATTTACAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICLQGGL*GHIYNQ Trigger: CTGATTGTAAATGTGACCCCACAGACCACCTTGGAG...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTACATTTACAATCAGCTaGTCGTCCCATTTTGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTTFTIS*SSHFGL Trigger: TAATCCAAAATGGGACGAGCAGCTGATTGTAAATGT...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATCAGAGTCAGGGTCTATaGGGCTCCGAGCTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNQSQGL*GSELLV Trigger: GACCAGAAGCTCGGAGCCTCATAGACCCTGACTCTG...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGTAGTAAAGTACCCATaGTTGAAGTATTATCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVVVKYP*LKYYQL Trigger: TAGCTGATAATACTTCAACCATGGGTACTTTACTAC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCCCGTCACCAGGATATTaGAACCTCCCAACTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICPSPGY*NLPTLN Trigger: ATTTAAAGTTGGGAGGTTCCAATATCCTGGTGACGG...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGAAAAACCATTCTCTTaGAAGGCCACCATAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICEKPFS*KATIIK Trigger: CTTGATTATGGTGGCCTTGCAAGAGAATGGTTTTTC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTAATTGGAAGTCGAGGTaGTATCTTCAGATGGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSNWKSR*YLQMVV Trigger: TACTACCATCTGAAGATACCACCTCGACTTCCAATT...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTACATTTACAATCAGCTaGTCGTCCCATTTTGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSTFTIS*SSHFGL Trigger: TAATCCAAAATGGGACGAGCAGCTGATTGTAAATGT...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCATGGAACAGTGCCATTaGAATAAAGCGACCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICMEQCH*NKATNK Trigger: TTTATTGGTCGCTTTATTGCAATGGCACTGTTCCAT...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATACATTCACTGTGTTCTaGGGATGCTGGGGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNTFTVF*GCWGFL Trigger: CAAGAACCCCCAGCATCCTCAGAACACAGTGAATGT...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATTCTCTGTTCCCACCCTaGTGGCAAAGCTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNSLFPP*WQSFCV Trigger: AACACAGAAGCTTTGCCATCAGGGTGGGAACAGAGA...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGTCTCTTTCACAAACTaGCAAAACCAAATAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HAANTIQCHLGRRTWHICVSFTN*QNQIIC Trigger: GCAAATTATTTGGTTTTGGCAGTTTGTGAAAGAGAC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATAGATGTGACTGGCTTTaGAGCTGGAGCATTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNRCDWL*SWSIFG Trigger: CCCAAAAATGCTCCAGCTCCAAAGCCAGTCACATCT...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATGTGAACAGCAGGAGTTaGGAACAACAGTATTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNVNSRS*EQQYWL Trigger: CAACCAATACTGTTGTTCCCAACTCCTGCTGTTCAC...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATCCGTCACCAGGATATTaGAACCTCCCAACTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNPSPGY*NLPTLN Trigger: ATTTAAAGTTGGGAGGTTCCAATATCCTGGTGACGG...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATTGTAACCTTCCACTGTaGATATCACTAGTGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNCNLPL*ISLVSD Trigger: ATCTGACACTAGTGATATCCACAGTGGAAGGTTACA...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATAATTGGAAGTCGAGGTaGTATCTTCAGATGGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNNWKSR*YLQMVV Trigger: TACTACCATCTGAAGATACCACCTCGACTTCCAATT...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATATGGAACAGTGCCATTaGAATAAAGCGACCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNMEQCH*NKATNK Trigger: TTTATTGGTCGCTTTATTGCAATGGCACTGTTCCAT...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| 3UTR CAA 72 bp | CTCATTTGCAGTCAAAGGATAGAATTGAAGATGATCTaGTTAAGCCATTATAGGATCAGATGGATACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LICSQRIELKMI*LSHYRIRWILH Trigger: ATGCAGTATCCATCTGATCCTATAATGGCTTAACAAGATCATCTTCAATTCTATCCTTTGACTGCAAATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS TCA 90 bp | TGGTCCCACTTCCGCACTGGCAGAGGGAATACATTCACTGTGTTCTaGGGATGCTGGGGGTTCTTGTACAGGAGGCTCTTGGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WSHFRTGRGNTFTVF*GCWGFLYRRLLGGG Trigger: ACCACCACCCAAGAGCCTCCTGTACAAGAACCCCCAGCATCCTCAGAACACAGTGAATGTATTCCCTCTGCCAGTGCGGAAGTGGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGGATGCTGGGGGTTCTaGTACAGGAGGCTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVGCWGF*YRRLLG Trigger: ACCCAAGAGCCTCCTGTACAAGAACCCCCAGCATCC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTTGTACAGGAGGCTCTaGGGTGGTGGTGCTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVLYRRL*GGGASA Trigger: TGCACTAGCACCACCACCCAAGAGCCTCCTGTACAA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGGCAAAGCTTCTGTGTaGGTGTTTCCAGACTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVGKASV*VFPDCG Trigger: GCCACAGTCTGGAAACACCAACACAGAAGCTTTGCC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTCATAGCTCCCTGCAATaGATTCCGCTGAGACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTHSSLQ*IPLRLP Trigger: TGGCAGTCTCAGCGGAATCAATTGCAGGGAGCTATG...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTCAGGCAACCTGGGAGTaGTCCTTGTTGCAGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSQATWE*SLLQGL Trigger: GAGACCCTGCAACAAGGACAACTCCCAGGTTGCCTG...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGGTGGTGCTAGTGCAATaGGAAGTCGAGGTGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVVVLVQ*EVEVVS Trigger: AGATACCACCTCGACTTCCAATTGCACTAGCACCAC...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGGATGCTGGGGGTTCTaGTACAGGAGGCTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HAANTIQCHLGRRTWHICGCWGF*YRRLLG Trigger: ACCCAAGAGCCTCCTGTACAAGAACCCCCAGCATCC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTTGCCAAGTCAACCTCTaGCATGCCACACAGCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTCQVNL*HATQHN Trigger: GTTATGCTGTGTGGCATGCAAGAGGTTGACTTGGCA...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTGTGAACAGCAGGAGTaGGGAACAACAGTATTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVCEQQE*GTTVLV Trigger: AACCAATACTGTTGTTCCCAACTCCTGCTGTTCACA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTCCTCCTCACCTCCAACTTTGTCTTACTGGATTCAGTGAGCCAGATGTGTCCGTCACCAGGATATaGGAACCTCCCAACTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGPPHLQLCLTGFSEPDVSVTRI*EPPNFK Trigger: TTTAAAGTTGGGAGGTTCCAATATCCTGGTGACGGA...CACATCTGGCTCACTGAATCCAGTAAGACAAAGTTGGAGGTGAGGAGGACCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGTTTCCCTCTTTCCCCTCACGTTCACCACTGAACTTCTCTGTCACTTCTGTGGTGCTAGTGCAATaGGAAGTCGAGGTGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: IWFPSFPSRSPLNFSVTSVVLVQ*EVEVVS Trigger: AGATACCACCTCGACTTCCAATTGCACTAGCACCAC...AGAAGTGACAGAGAAGTTCAGTGGTGAACGTGAGGGGAAAGAGGGAAACCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAAGTCAATCCCAGCTGCTCCTAGACACGACTGGATCTATCACACGACTGTTTCAAGTCCACTGTaGCTTTTCCTAATAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSKSIPAAPRHDWIYHTTVSSPL*LFLIEH Trigger: ATGCTCTATTAGGAAAAGCAACAGTGGACTTGAAAC...AGTCGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS GCA 90 bp | GTGTTTCCAGACTGTGGCCGCAGAGGTTCTACACACCCTTCTGGCTaGCTTACTTTGTCAAACACAGAATTATTTCTAGAATCAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFPDCGRRGSTHPSG*LTLSNTELFLESES Trigger: TGACTCTGATTCTAGAAATAATTCTGTGTTTGACAAAGTAAGGCAGCCAGAAGGGTGTGTAGAACCTCTGCGGCCACAGTCTGGAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATCAGGCAACCTGGGAGTaGTCCTTGTTGCAGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNQATWE*SLLQGL Trigger: GAGACCCTGCAACAAGGACAACTCCCAGGTTGCCTG...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCTAACACAATCCAATGTCACCTAGGGAGAAGAACATGGCACATATGCGTTTCAAGTCCACTGTaGCTTTTCCTAATAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HAANTIQCHLGRRTWHICVSSPL*LFLIEH Trigger: ATGCTCTATTAGGAAAAGCAACAGTGGACTTGAAAC...GCATATGTGCCATGTTCTTCTCCCTAGGTGACATTGGATTGTGTTAGCTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATGGCAAAGCTTCTGTGTaGGTGTTTCCAGACTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNGKASV*VFPDCG Trigger: GCCACAGTCTGGAAACACCAACACAGAAGCTTTGCC...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATCATAGCTCCCTGCAATaGATTCCGCTGAGACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNHSSLQ*IPLRLP Trigger: TGGCAGTCTCAGCGGAATCAATTGCAGGGAGCTATG...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS-3UTR CAA 90 bp | GAAGCAGCCAAGTTCAGTACCTTTTATGTATCCCTAAGCATTAAACTATCAAATTCTGGCTGCCTTACTTaGTCAAACACAGAATTATTT | + |
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Preference number: 5 (lower is better) Translates to: EAAKFSTFYVSLSIKLSNSGCLT*SNTELF Trigger: AAATAATTCTGTGTTTGACAAAGTAAGGCAGCCAGA...ATTTGATAGTTTAATGCTTAGGGATACATAAAAGGTACTGAACTTGGCTGCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS TCA 72 bp | TTCCGCACTGGCAGAGGGAATACATTCACTGTGTTCTaGGGATGCTGGGGGTTCTTGTACAGGAGGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FRTGRGNTFTVF*GCWGFLYRRLL Trigger: CAAGAGCCTCCTGTACAAGAACCCCCAGCATCCTCAGAACACAGTGAATGTATTCCCTCTGCCAGTGCGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS CCA 72 bp | GTGGTGACTCCAAACTCGGAACTCCAAGGTGGTCTGTaGGGTCACATTTACAATCAGCTGCTCGTCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: VVTPNSELQGGL*GHIYNQLLVPF Trigger: AAATGGGACGAGCAGCTGATTGTAAATGTGACCCCACAGACCACCTTGGAGTTCCGAGTTTGGAGTCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS CAA 90 bp | GACTGTGGCCGCAGAGGTTCTACACACCCTTCTGGCTGCCTTACTTaGTCAAACACAGAATTATTTCTAGAATCAGAGTCAGGGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: DCGRRGSTHPSGCLT*SNTELFLESESGSM Trigger: CATAGACCCTGACTCTGATTCTAGAAATAATTCTGTGTTTGACAAAGTAAGGCAGCCAGAAGGGTGTGTAGAACCTCTGCGGCCACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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| CDS TCA 72 bp | CAGCAGGAGTTGGGAACAACAGTATTGGTTGATACATaGTTATCAATTCCAATAGTACCTTCAACAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QQELGTTVLVDT*LSIPIVPSTGN Trigger: GTTGCCTGTTGAAGGTACTATTGGAATTGATAATCATGTATCAACCAATACTGTTGTTCCCAACTCCTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035982.8 ENSMUST00000108246.9 |
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